Diff of the two buildlogs: -- --- b1/build.log 2024-01-09 03:11:50.065693184 +0000 +++ b2/build.log 2024-01-09 04:23:32.795065971 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Feb 9 19:43:57 -12 2025 -I: pbuilder-time-stamp: 1739173437 +I: Current time: Tue Jan 9 17:11:54 +14 2024 +I: pbuilder-time-stamp: 1704769914 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./python-escript_5.6-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.3Tbm829s/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.BWg0ZyJr/trustedkeys.kbx': General error gpgv: Signature made Wed Apr 7 21:34:21 2021 gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key @@ -40,49 +40,80 @@ dpkg-source: info: applying ignore-dflag.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3526032/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 9 03:12 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='c805fd8816ce4946b7db8532ee908a7f' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3526032' - PS1='# ' - PS2='> ' + INVOCATION_ID=86ee19a133474fb397bb87343ed09de0 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3586001 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5Tnp0o5M/pbuilderrc_nzLV --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5Tnp0o5M/b1 --logfile b1/build.log python-escript_5.6-3.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5Tnp0o5M/pbuilderrc_Gnen --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5Tnp0o5M/b2 --logfile b2/build.log python-escript_5.6-3.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash @@ -142,7 +173,7 @@ -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Feb 8 15:47 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 9 03:12 sh -> /bin/bash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su @@ -168,7 +199,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/3526032/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -633,7 +664,7 @@ Get: 361 http://deb.debian.org/debian bullseye/main amd64 texlive-pictures all 2020.20210202-3 [6743 kB] Get: 362 http://deb.debian.org/debian bullseye/main amd64 texlive-latex-extra all 2020.20210202-3 [13.7 MB] Get: 363 http://deb.debian.org/debian bullseye/main amd64 zip amd64 3.0-12 [232 kB] -Fetched 350 MB in 7s (48.6 MB/s) +Fetched 350 MB in 18s (19.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17743 files and directories currently installed.) @@ -1792,8 +1823,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Feb 10 07:47:38 UTC 2025. -Universal Time is now: Mon Feb 10 07:47:38 UTC 2025. +Local time is now: Tue Jan 9 03:13:34 UTC 2024. +Universal Time is now: Tue Jan 9 03:13:34 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libopenexr25:amd64 (2.5.4-2+deb11u1) ... @@ -2165,7 +2196,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-escript_5.6-3_source.changes +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-escript_5.6-3_source.changes dpkg-buildpackage: info: source package python-escript dpkg-buildpackage: info: source version 5.6-3 dpkg-buildpackage: info: source distribution unstable @@ -2230,13 +2265,13 @@ make[1]: Entering directory '/build/reproducible-path/python-escript-5.6' # Build steps for py3 mkdir -p /build/reproducible-path/python-escript-5.6/debian/stage3 -scons -j16 cc_optim=' -O3 ' build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs +scons -j15 cc_optim=' -O3 ' build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs scons: Reading SConscript files ... 3.9.2 (default, Feb 28 2021, 17:03:44) [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -2255,7 +2290,7 @@ Checking for C++ library umfpack... yes Checking for C++ library siloh5... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-v4c3gign because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-zhksobpl because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. 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(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex -))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. -) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +fs.tex))) (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))entering extended mode +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +\@input{elist.aux} + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t +ex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all_defs.texcd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex + (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis +t.tex (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.styThis is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. + (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo +.tex) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty +Writing index file user.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))entering extended mode LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo kbook.tex -(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy sdoc.cls -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex))) +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment') +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex)) Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) -Package `listing', V1.2, <1999/05/25> -)))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)) +No file user.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex)cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex - -Writing index file user.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd +[Loading MPS to PDF converter (version 2006.09.02).] +) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.stycd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh -)))Mkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all_defs.texMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api") - -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))Mkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") -cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh - (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -)This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. +) +No file install.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty 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examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis -t.tex adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty))cd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh + +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))) +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.stycd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex +)Mkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.styMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api") +) adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) adding: examples/usersguide/mount.py (deflated 60%) adding: examples/usersguide/heatedblock.py (deflated 58%) adding: examples/usersguide/helmholtz.py (deflated 56%) @@ -2483,11 +2549,15 @@ adding: examples/inversion/create_netcdf.py (deflated 60%) adding: examples/inversion/grav_ermapper.py (deflated 57%) adding: examples/inversion/grav_netcdf.py (deflated 58%) - adding: examples/inversion/gravmag_netcdf.py (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (deflated 61%) - adding: examples/inversion/gravmag_nodriver.py (deflated 60%) - adding: examples/inversion/mag_netcdf.py (deflated 59%) - adding: examples/inversion/test_commemi1.py (deflated 73%) - adding: examples/inversion/test_commemi4.py (deflated 75%) + adding: examples/inversion/gravmag_netcdf.py (deflated 61%) + adding: examples/inversion/gravmag_nodriver.py [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.mapTouch("debian/stage3/esys/__init__.py") + (deflated 60%) + adding: examples/inversion/mag_netcdf.py} (deflated 59%) + adding: examples/inversion/test_commemi1.py +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.styMkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") + (deflated 73%) + adding: examples/inversion/test_commemi4.py] (deflated 75%) adding: examples/usersguide/trapezoid.py (deflated 57%) adding: examples/usersguide/quad.py (deflated 56%) adding: examples/usersguide/brick.py (deflated 59%) @@ -2495,29 +2565,23 @@ adding: examples/usersguide/poisson_matplotlib.py (deflated 59%) adding: examples/cookbook/example01c.py (deflated 58%) adding: examples/cookbook/example02.py (deflated 58%) - adding: examples/cookbook/example03a.pyTouch("debian/stage3/esys/__init__.py") - -No file user.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii (deflated 58%) - adding: examples/cookbook/example04a.py (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty (deflated 60%) + adding: examples/cookbook/example03a.py (deflated 58%) + adding: examples/cookbook/example04a.py) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (deflated 60%) adding: examples/cookbook/example04b.py (deflated 59%) adding: examples/cookbook/example05a.py (deflated 60%) - adding: examples/cookbook/example05b.py -Package `listing', V1.2, <1999/05/25> -) (deflated 63%) - adding: examples/cookbook/example05c.py (deflated 60%) + adding: examples/cookbook/example05b.py (deflated 63%) + adding: examples/cookbook/example05c.py +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig +hts.tex (deflated 60%) adding: examples/cookbook/example06.py (deflated 62%) adding: examples/cookbook/example07a.py (deflated 60%) adding: examples/cookbook/example07b.py (deflated 60%) adding: examples/cookbook/example08a.py (deflated 60%) adding: examples/cookbook/example08b.py (deflated 62%) - adding: examples/cookbook/example08c.py -[Loading MPS to PDF converter (version 2006.09.02).] -)) (deflated 62%) - adding: examples/cookbook/example09m.py (deflated 66%) - adding: examples/cookbook/example09a.py) (deflated 61%) + adding: examples/cookbook/example08c.py (deflated 62%) + adding: examples/cookbook/example09m.py (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd (deflated 66%) + adding: examples/cookbook/example09a.py (deflated 61%) adding: examples/cookbook/example10a.py (deflated 58%) adding: examples/cookbook/example10b.py (deflated 58%) adding: examples/cookbook/example10m.py (deflated 62%) @@ -2530,73 +2594,24 @@ adding: examples/inversion/content.txt (deflated 77%) adding: examples/inversion/data/GravitySmall (deflated 3%) adding: examples/inversion/data/MagneticSmall (deflated 1%) - adding: examples/inversion/data/QLDWestGravity -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (deflated 11%) - adding: examples/inversion/data/QLDWestMagnetic (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (deflated 7%) + adding: examples/inversion/data/QLDWestGravity)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (deflated 11%) + adding: examples/inversion/data/QLDWestMagnetic) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid +e.tex [2 +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) (deflated 7%) adding: examples/inversion/data/GravitySmall.ers (deflated 49%) adding: examples/inversion/data/MagneticSmall.ers (deflated 49%) adding: examples/inversion/data/QLDWestGravity.ers (deflated 50%) adding: examples/inversion/data/QLDWestMagnetic.ers (deflated 50%) - adding: examples/inversion/data/GravitySmall.nc (deflated 46%) + adding: examples/inversion/data/GravitySmall.nc) (deflated 46%) adding: examples/inversion/data/MagneticSmall.nc (deflated 43%) - adding: examples/inversion/data/QLDWestGravity.nc -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg (deflated 12%) - adding: examples/inversion/data/QLDWestMagnetic.nc -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) (deflated 9%) - adding: examples/inversion/data/HalfSphere_v1.4.msh))) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc -)) -(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc - -Excluding comment 'comment') -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.styentering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri -nfo.tex) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty))/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls -Writing index file install.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc -) -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)))) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) [1 -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc -{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map} -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig -hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)gzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid -e.tex -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty [2]) -No file install.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [3 -[Loading MPS to PDF converter (version 2006.09.02).] -)] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty + adding: examples/inversion/data/QLDWestGravity.nc [3] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (deflated 12%) + adding: examples/inversion/data/QLDWestMagnetic.nc (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74. @@ -2606,34 +2621,48 @@ LaTeX Warning: Reference `app:ourrefs' on page 4 undefined on input line 85. -[4 -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) [5])) [6]) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc - [7 -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.tex)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc - [8] +[4] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (deflated 9%) + adding: examples/inversion/data/HalfSphere_v1.4.mshThis is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.tex [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map [5 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty])} [6]]/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc -) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg +uide.tex [7]) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty [2 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.tex [8]] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst -ep.tex -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc +ep.tex [3] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.tex [4 +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc +] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) +Chapter 1. -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc +LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) + +LaTeX Warning: Reference `app:cxxfeatures' on page 5 undefined on input line 31 +. + + +LaTeX Warning: Reference `app:trilinos' on page 5 undefined on input line 33. + +))) [5/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.tex LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3 3. @@ -2642,12 +2671,22 @@ LaTeX Warning: Reference `eq:FirstSteps.1' on page 9 undefined on input line 58 . -[9) ] -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (deflated 65%) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03> +Chapter 2. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.tex +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line 94. @@ -2679,33 +2718,27 @@ LaTeX Warning: Citation `NumHand' on page 10 undefined on input line 148. [10]) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.stysh: 1: svnversion: not found -) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfgwarning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value -Using the default: a4! -))) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map} -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.styInstall file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" -]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg -uide.texInstall file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +Document Class: book 2020/04/10 v1.4m Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.stygzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty)(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty)))/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc + [7] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.tex [8] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc + +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194. @@ -2716,45 +2749,98 @@ LaTeX Warning: Reference `chap:speckley' on page 11 undefined on input line 195 . -[11 ]) [2 -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)] [3/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc -] -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.tex -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty [4Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" -)] -Chapter 1. +[11 +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +Chapter 3. +) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty [9 ]Install file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" -LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.tex [10] (deflated 65%) +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) +Chapter 4. +) [11]Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc -LaTeX Warning: Reference `app:cxxfeatures' on page 5 undefined on input line 31 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.tex + +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. + +) +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) [12] +Chapter 5. + +LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 27. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) + +LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 4 +0. + +[13] +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.styInstall file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" + +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc + + +LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 79. + + +LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 102. + + + +LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 104. + + +LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 105. + + +LaTeX 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undefined on input line 115. + +[14 +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2 05. @@ -2767,22 +2853,93 @@ LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223. -[12 -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty]))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc +[12Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +]) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.styInstall file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.stysh: line 1: svnversion: command not found +Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)) [7 -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.tex [8] -Chapter 3. +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)warning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +)warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" +warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value +Using the default: a4! ) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) [9] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.tex [10] -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.styDoxygen version used: 1.9.1 +Underfull \hbox (badness 10000) in paragraph at lines 159--160 + + +Underfull \hbox (badness 10000) in paragraph at lines 207--208 + +[15Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" +] +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def 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input line 240. + + +LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 268. + + +Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[16] +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty [14 +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty ] + +LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. + +Excluding 'comment' comment.)))/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc + [17/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc +] +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty 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Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src -Chapter 4. -)) - -LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312. - - -LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317. - - -LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317. - -[13/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc - [11 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty]/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc -]) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.tex [12)] -Chapter 5. - -LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 27. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty - -LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 4 -0. - -[13] -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty))Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" -Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" -Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" - -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) - -LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 79. - - -LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 102. - - - -LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 104. - - -LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 105. - - -LaTeX Warning: Reference `sec:susesrc' on page 14 undefined on input line 106. - - -LaTeX Warning: Reference `sec:centossrc' on page 14 undefined on input line 107 -. - - -LaTeX Warning: Reference `sec:fedorasrc' on page 14 undefined on input line 108 -. - - -LaTeX Warning: Reference `sec:macportsrc' on page 14 undefined on input line 10 -9. - - -LaTeX Warning: Reference `sec:homebrewsrc' on page 14 undefined on input line 1 -10. - - -LaTeX Warning: Reference `sec:freebsdsrc' on page 14 undefined on input line 11 -1. - - -LaTeX Warning: Reference `sec:windowssrc' on page 14 undefined on input line 11 -2. - - -LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 115. - -[14] [14 /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc -)] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line 407. @@ -2932,25 +3003,21 @@ LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426. -[15Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. 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[16 ]Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +ures//DiffusionDomain.pdf>]Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.styInstall file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li ne 72. @@ -3031,11 +3100,81 @@ LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156. -[17] -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" -)Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" +[17)] +(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [19]Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" +Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc -/Data.cpp... + +(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty))) + +LaTeX Warning: Reference `app:trilinos' on page 20 undefined on input line 618. + + +[20] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty + +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li +ne 161. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 161. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 177. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on +input line 179. + +[18 +(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) +) [21 +(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.tex)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc + [22] +Appendix A. +) +(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty) [23] +\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l +of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} +\@input{elist.aux} + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli +st.tex +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.tex [24] (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc +) + +LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li +ne 306. + +[19 +\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g +def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} +)]Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" + (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver +info.tex) +Appendix B. +(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd))/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc + +Writing index file cookbook.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)/Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.cpp... @@ -3081,61 +3220,57 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... 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-LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. - -Excluding 'comment' comment. -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def [17 -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)]/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc - - -LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li -ne 306. - -[19 -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty)] -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc +[Loading MPS to PDF converter (version 2006.09.02).] ) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.styfile /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc + +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc +))file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp... @@ -3179,17 +3314,37 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.h... -Parsing file /build/reproducible-path/ -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" - [18 +Parsing file /build/reproducible-path/) -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l -ine 318. +LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61. -[20]]/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? +[21 ] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.stypython-escript-5.6/escriptcore/src/FunctionSpace.h... + +LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. + + +LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. + + +LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. + + +LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 +. + +[22 ] +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" +python-escript-5.6/escriptcore/src/FunctionSpace.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceFactory.cpp... @@ -3233,71 +3388,28 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.h... -Parsing file /build/reproducible-path/pytInstall file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" -))Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversions.py debian/tmp3/posix/downunder/inversions.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty [19/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc -] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) - -LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4 -03. - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty - -LaTeX Warning: Reference `app:trilinos' on page 20 undefined on input line 618. - - -[20)) - -LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61. - -[21 ] - -LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. - - -LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. - - -LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. - - -LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 -. - -[22Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" - ] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)) [21]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.tex/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex [22]/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc - +Parsing file /build/reproducible-path/pyt +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc +)) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)) LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121. [23 ] -Appendix A. -) [23/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc -hon-escript-5.6/escriptcore/src/Random.h... +ures//wavea.pdf +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def, page is rotated 90 degrees>]) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)/usr/bin/python3 scripts/py_comp.py downunder/py_src/regularizations.py debian/tmp3/posix/downunder/regularizations.pyc + [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc +guide.tex [2]) [3] [4]hon-escript-5.6/escriptcore/src/Random.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h... @@ -3341,47 +3453,42 @@ Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_AverageElementData.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_AverageElementData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyElementData.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_C] (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_C +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur +rentdev.texInstall file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" + [5]) [6] [7] [8] +Chapter 1. -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.tex [24]**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -Appendix B. -(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [25 -(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty)] [26 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int +ro.tex +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.styInstall file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/seismic.py debian/tmp3/posix/downunder/seismic.pyc + + +LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. + + + +LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. + + +LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. + +[9] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui +ckstart.tex)/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc +pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [10] +Chapter 2. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple01.tex LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214. -[24 -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty]] -Underfull \vbox (badness 10000) has occurred while \output is active [27] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty) -[28] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.aux -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.aux) -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.aux))) -kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000 -)Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/regularizations.py debian/tmp3/posix/downunder/regularizations.pyc -opyElementData.cpp... +[24] +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.styopyElementData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyNodalData.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyNodalData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_getAssembleParameters.cpp... @@ -3425,46 +3532,92 @@ Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h... -Parsing file /build/reproducib -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" -) +Parsing file /build/reproducib/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc -LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line -228. + +LaTeX Warning: Reference `fig:onedgbmodel' on page 11 undefined on input line 2 +0. -LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25 +Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w +arning (ext4): destination with the same identifier (name{figure.2.1}) has been + already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.47 \end{equation} + ] +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 59. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 66. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 70. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 76. + + +LaTeX Warning: Reference `eqn:Tbeuler' on page 12 undefined on input line 102. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 102. + + +LaTeX Warning: Reference `eqn:beuler' on page 12 undefined on input line 125. + + +LaTeX Warning: Reference `eqn:hddisc' on page 12 undefined on input line 132. + +[12]Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" +Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l +ine 153. + + +LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158. + + +LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l +ine 165. + + +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171. + + +LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17 1. -[25Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" -] -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/seismic.py debian/tmp3/posix/downunder/seismic.pyc -)) -LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. +Underfull \hbox (badness 4353) in paragraph at lines 185--185 +[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able +at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound +ary _ +LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191. -LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335. +LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217. -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220. -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359. -[26 -(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)le-path/python-escript-5.6/dudley/src/DudleyDomain.h... +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221. + +[13/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc +]le-path/python-escript-5.6/dudley/src/DudleyDomain.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyVersion.h... @@ -3510,76 +3663,52 @@ Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... Preprocessing /build/rep -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.defInstall file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" - - -LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. - - -LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. - - - -LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. - - -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. - - -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. - -)Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex -Underfull \vbox (badness 1655) has occurred while \output is active [27 ]/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc -)) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on -input line 31. +LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l +ine 235. -LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l -ine 31. +LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l +ine 245. -LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32. +LaTeX Warning: Reference `ESCRIPT SET' on page 14 undefined on input line 247. -LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34. +LaTeX Warning: Reference `eqn:hd' on page 14 undefined on input line 258. -LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i -nput line 35. +LaTeX Warning: Reference `sec:escpybas' on page 14 undefined on input line 261. -LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i -nput line 58. +LaTeX Warning: Reference `sec:key' on page 14 undefined on input line 261. -LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin -e 67. +LaTeX Warning: Reference `fig:wf' on page 14 undefined on input line 268. -LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on -input line 77. +[14pdfTeX warning (ext4): destination with the same identifier (name{figure.2.2 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] [15pdfTeX warning (ext4): destination with the same identi +fier (name{figure.2.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] -LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line - 179. +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex -LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in -put line 72. +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333. -LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77 -. +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354. -[30 -(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty ] -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty -\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l -of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} -\@input{elist.aux} -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli -st.tex)Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" -Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" -Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" - (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> +LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on + input line 383. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 389. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 391. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 394. + + +LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line +406. + + +LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40 +7. + +[16 +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty] + +LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. + + +LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335. + + +LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) + +LaTeX Warning: Reference `eqn:hdgenf' on page 17 undefined on input line 420. + +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty + +LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359. + +[26 ]) +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) + +LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. + + +LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. + + + +LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. + + +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. + + +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. + ) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g -def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} -)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex +Underfull \vbox (badness 1655) has occurred while \output is active [27 ] +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106. +LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on +input line 31. -[31/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc -] (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver -info.tex))) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -Writing index file cookbook.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) -\@input{elist.aux} -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex. +LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l +ine 31. + + +LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32. + + +LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 35. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 58. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin +e 67. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 77. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 96. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 99. + +[28]. 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Parsing file /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... @@ -3841,41 +4013,37 @@ Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... -Preprocessing /build/ -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) [35]) +Preprocessing /build/ (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd)) -LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. +LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex -No file inversion.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +[31] -LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47. +LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line +671. -[36 ...shipout:D \box_use:N \l_shipout_box + +l.680 \clearpage + ] +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)reproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... @@ -3924,29 +4092,43 @@ Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/mmio.cpp... -Parsing file /build/reproducible-path/pyth [7] [8] -Chapter 1. +Parsing file /build/reproducible-path/pythInstall file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h" +Install file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h" -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) -LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. +LaTeX Warning: Reference `FLUID OUTPUT' on page 32 undefined on input line 218. +) +Underfull \hbox (badness 10000) in paragraph at lines 684--692 -LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. +LaTeX Warning: Float too large for page by 10.55325pt on input line 775. -LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. +[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.5}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.776 \clearpage + ...shipout:D \box_use:N \l_shipout_box - -l.47 \end{equation} - ] [9] [10] - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55. +LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63. +[33 +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg) ]> ]Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h" -[12 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.tex]6/paso/src/Smoother.cpp... +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty6/paso/src/Smoother.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/Smoother.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/solve.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/solve.cpp... @@ -4105,55 +4273,96 @@ Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_MatrixVector.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_mergeMainAndCouple.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_mergeMainAndCouple.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/Syste +Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/Syste> ]Install file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h" +Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h" +Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h" +Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h" +}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do +cguide.tex [2] +LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158. +)Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h" +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex) [3] [4] [5 +Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[][][][][][][][][][][][][][][][][][][][][][][][][] -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159. +LaTeX Warning: Reference `fig:onedheatout' on page 23 undefined on input line 8 +12. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple02.tex] [6]Install file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h" +Install file: "paso/src/SystemMatrixPattern.h" as "debian/stage3/include/paso/SystemMatrixPattern.h" -LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l -ine 165. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.tex +Underfull \hbox (badness 10000) in paragraph at lines 17--19 -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171. +LaTeX Warning: Reference `fig:onedhdmodel' on page 23 undefined on input line 2 +1. -LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17 -1. +LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34. +[23 -Underfull \hbox (badness 4353) in paragraph at lines 185--185 -[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able -at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound -ary _ +LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. -LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191. +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. -LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217. -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220. +LaTeX Warning: Reference `part1' on page 7 undefined on input line 30. -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221. +LaTeX Warning: Reference `part2' on page 7 undefined on input line 38. + +)] [7] + +LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47. + +[36 [8] ...shipout:D \box_use:N \l_shipout_box + +l.110 I + t is important to remark here that if a Dirichlet boundary condition is +] Chapter 1. LaTeX Warning: Reference `part2' on page 11 undefined on input line 12. @@ -4185,99 +4394,26 @@ LaTeX Warning: Reference `code: gravity1' on page 11 undefined on input line 82 . -[11] - -LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l -ine 235. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l -ine 245. - - -LaTeX Warning: Reference `ESCRIPT SET' on page 14 undefined on input line 247. - - -LaTeX Warning: Reference `eqn:hd' on page 14 undefined on input line 258. - - -LaTeX Warning: Reference `sec:escpybas' on page 14 undefined on input line 261. +[11mkdir: cannot create directory '././nonexistent': Permission denied +] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l +ine 116. -LaTeX Warning: Reference `sec:key' on page 14 undefined on input line 261. +LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li +ne 119. -LaTeX Warning: Reference `fig:wf' on page 14 undefined on input line 268. +LaTeX Warning: Float too large for page by 10.55325pt on input line 146. -[14pdfTeX warning (ext4): destination with the same identifier (name{figure.2.2 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [15pdfTeX warning (ext4): destination with the same identi -fier (name{figure.2.3}) has been already used, duplicate ignored +) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2 +.7}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.313 T - here are various ways to construct domain objects. The simplest form ... - ]Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h" - - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317. - - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333. - - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354. - - -LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on - input line 383. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 389. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 391. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 394. - - -LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line -406. - - -LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40 -7. - -[16 [12] ])Install file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h" - - -LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75. - -)) [37 ] [13 ]>] +Parsing f) [12 ] +[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.108 \chapter + {Heat Diffusion in Two Dimensions} ] [13 ]> ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23 5. @@ -4412,7 +4622,8 @@ LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [38] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf) + LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. @@ -4424,19 +4635,15 @@ LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299 . -[16]mkdir: cannot create directory '././nonexistent': Permission denied - -Chapter 2. - -LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. - - -LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. - - -LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. - -[39] +[16] +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf + Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf + Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf + Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf + Ok [0] LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 17 undefined on input line 324. @@ 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/build/reproducible-path/python-escript-5.6/weipa/src/EscriptDataset.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/EscriptDataset.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyDomain.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyDomain.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyDomain.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyDomain.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyElements.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyElements.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyElements.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyElements.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyNodes.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyNodes.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/FinleyNodes.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/FinleyNodes.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/NodeData.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/NodeData.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyDomain.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyDomain.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyDomain.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyDomain.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weip [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] +[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] +[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] +[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf + Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf + Ok [185] [178] [179] [170/build/reproducible-path/python-escript-5.6/escriptcore/src/ArrayOps.h:41: warning: the name 'LocalOps.h' supplied as the argument in the \file statement is not an input file +]/build/reproducible-path/python-escript-5.6/escriptcore/src/system_dep.h:20: warning: the name 'escript/src/system_dep.h' supplied as the argument in the \file statement is not an input file + [186]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf + Ok [188] [189] [190]) ) ) ) +Font metrics written on tctt1000.tfm. +Output written on tctt1000.600gf (128 characters, 19540 bytes). +Transcript written on tctt1000.log. +Underfull \hbox (badness 10000) in paragraph at lines 22--23 -LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 -. +Underfull \hbox (badness 10000) in paragraph at lines 22--23 -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the -LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83. +LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 3 +0. -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88. +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 32. -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107. +LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 4 +6. -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119. +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 66. -LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12 -1. +LaTeX Warning: Reference `eqn:hd' on page 27 undefined on input line 72. -[44 ] + +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 73. + +[27] + +LaTeX Warning: Reference `eqn:commonform nabla' on page 28 undefined on input l +ine 87. + + +LaTeX Warning: Reference `eqn:hdgenf' on page 28 undefined on input line 98. + + +LaTeX Warning: Reference `eqn:commonform2D' on page 28 undefined on input line +102. + + +LaTeX Warning: Reference `ESCRIPT SET' on page 28 undefined on input line 113. + + +LaTeX Warning: Reference `eqn: kappa general' on page 28 undefined on input lin +e 125. + +[28pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.141 \begin{python} + ] LaTeX Warning: Reference `code: gravity1' on page 19 undefined on input line 50 1. @@ -4628,7 +4868,7 @@ LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631. -[19>]] [20 ] +LaTeX Warning: Reference `sec: plot T' on page 30 undefined on input line 243. -LaTeX Warning: Float too large for page by 10.55325pt on input line 775. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) -[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur -e.2.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.776 \clearpage - ]>] + +LaTeX Warning: Reference `fig:twodhdans' on page 30 undefined on input line 301 +. + + +Underfull \hbox (badness 10000) in paragraph at lines 306--311 + +[30]>mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated. +] LaTeX Warning: Reference `part2' on page 23 undefined on input line 751. -) [23 +) [23] -LaTeX Warning: Reference `sec:datamanager' on page 48 undefined on input line 3 -68. +LaTeX Warning: There were undefined references. -[48]] + +LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. + + +Package rerunfilecheck Warning: File `install.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc} [24 +<]/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb> + +LaTeX Warning: Reference `fig:mayavi window' on page 31 undefined on input line + 360. + + +LaTeX Warning: Reference `fig:mayavi window2' on page 31 undefined on input lin +e 365. + +) [31 ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} +Output written on install.pdf (28 pages, 167281 bytes). +Transcript written on install.log. + Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 7--7 @@ -4816,43 +5007,270 @@ LaTeX Warning: Reference `FIG:P1:MAG:1' on page 25 undefined on input line 76. -[25] [26 [51 dummy) +Possible candidates: + 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' + 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for + DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) +Possible candidates: + 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' + 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' -LaTeX Warning: Reference `chap:ripley' on page 54 undefined on input line 880. +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:5664: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined. +This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1973: warning: no uniquely matching class member found for + DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) +Possible candidates: + 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:2005: warning: no uniquely matching class member found for + const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const +Possible candidates: + 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h -LaTeX Warning: Citation `gaussfilter' on page 54 undefined on input line 909. +Install file: "escriptcore/src/DataVectorOps.h" as "debian/stage3/include/escript/DataVectorOps.h" +Install file: "escriptcore/src/Assert.h" as "debian/stage3/include/escript/Assert.h" +Install file: "escriptcore/src/DataReady.h" as "debian/stage3/include/escript/DataReady.h" +Install file: "escriptcore/src/DataLazy.h" as "debian/stage3/include/escript/DataLazy.h" +Install file: "escriptcore/src/DataTagged.h" as "debian/stage3/include/escript/DataTagged.h" +Install file: "escriptcore/src/DataConstant.h" as "debian/stage3/include/escript/DataConstant.h" +Install file: "escriptcore/src/DataExpanded.h" as "debian/stage3/include/escript/DataExpanded.h" +Install file: "escriptcore/src/DataException.h" as "debian/stage3/include/escript/DataException.h" +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for + DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const +Possible candidates: + 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const' + 'DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1040: warning: no matching class member found for + DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) +Possible candidates: + 'DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' + 'DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:745: warning: no matching class member found for + DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) +Possible candidates: + 'DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' + 'DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:56: warning: no matching file member found for +void escript::DataTypes::pointToStream(std::ostream &os, const CplxVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) +Possible candidates: + 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for +void escript::DataTypes::pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) +Possible candidates: + 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for +std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< cplx_t > &data, const ShapeType &shape, int offset, const std::string &prefix) +Possible candidates: + 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for +void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< real_t > &dest, RealVectorType::size_type doffset, RealVectorType::size_type nvals, const RealVectorType &src, RealVectorType::size_type soffset) +Possible candidates: + 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:569: warning: no matching file member found for +void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< cplx_t > &dest, CplxVectorType::size_type doffset, CplxVectorType::size_type nvals, const CplxVectorType &src, CplxVectorType::size_type soffset) +Possible candidates: + 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:126: warning: no matching file member found for +std::string escript::DataTypes::pointToString(const &data, const std::vector< int > &shape, int offset, const std::string &prefix) +Possible candidates: + 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:148: warning: no matching file member found for +void escript::DataTypes::copyPoint(&dest, long doffset, long nvals, const &src, long soffset) +Possible candidates: + 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h:265: warning: no matching class member found for + template < T > + escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(escript::DataTypes::DataVectorAlt< T >::long size, const DataVectorAlt< T >::value_type val, const DataVectorAlt< T >::size_type blockSize) +Possible candidates: + 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt()' + 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const DataVectorAlt< T > &other)' + 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const size_type size, const value_type val=0.0, const size_type blockSize=1)' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:62: warning: no matching file member found for +void escript::matMult(const &left, const std::vector< int > &leftShape, long leftOffset, const &right, const std::vector< int > &rightShape, long rightOffset, &result, const std::vector< int > &resultShape) +Possible candidates: + 'void matMult(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type leftOffset, const DataTypes::RealVectorType &right, const DataTypes::ShapeType &rightShape, DataTypes::RealVectorType::size_type rightOffset, DataTypes::RealVectorType &result, const DataTypes::ShapeType &resultShape)' at line 39 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:201: warning: no matching file member found for +void escript::hermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) +Possible candidates: + 'void hermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, DataTypes::CplxVectorType::size_type evOffset)' at line 916 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:220: warning: no matching file member found for +void escript::antihermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) +Possible candidates: + 'void antihermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::CplxVectorType::size_type evOffset)' at line 963 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:684: warning: no matching file member found for +void escript::eigenvalues(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) +Possible candidates: + 'void eigenvalues(const DataTypes::RealVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::RealVectorType::size_type inOffset, DataTypes::RealVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::RealVectorType::size_type evOffset)' at line 639 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:925: warning: no matching file member found for +void escript::binaryOpVectorRightScalar(&res, long resOffset, long samplesToProcess, long sampleSize, const &left, long leftOffset, const double *right, bool rightreset, escript::ES_optype operation, bool singleleftsample) +Possible candidates: + 'void binaryOpVectorRightScalar(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::RealVectorType &left, typename DataTypes::RealVectorType::size_type leftOffset, const DataTypes::real_t *right, const bool rightreset, escript::ES_optype operation, bool singleleftsample)' at line 500 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + 'void binaryOpVectorRightScalar(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LVEC &left, typename LVEC::size_type leftOffset, const RSCALAR *right, const bool rightreset, escript::ES_optype operation, bool singleleftsample)' at line 829 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1032: warning: no matching file member found for +void escript::binaryOpVectorLeftScalar(&res, long resOffset, long samplesToProcess, long sampleSize, const double *left, bool leftreset, const &right, long rightOffset, escript::ES_optype operation, bool singlerightsample) +Possible candidates: + 'void binaryOpVectorLeftScalar(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::real_t *left, const bool leftreset, const DataTypes::RealVectorType &right, typename DataTypes::RealVectorType::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 639 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + 'void binaryOpVectorLeftScalar(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LSCALAR *left, const bool leftreset, const RVEC &right, typename RVEC::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 941 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1139: warning: no matching file member found for +void escript::binaryOpVector(&res, long resOffset, long samplesToProcess, long sampleSize, const &left, long leftOffset, bool leftreset, const &right, long rightOffset, bool rightreset, escript::ES_optype operation) +Possible candidates: + 'void binaryOpVector(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::RealVectorType &left, typename DataTypes::RealVectorType::size_type leftOffset, const bool leftreset, const DataTypes::RealVectorType &right, typename DataTypes::RealVectorType::size_type rightOffset, const bool rightreset, escript::ES_optype operation)' at line 768 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + 'void binaryOpVector(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LVEC &left, typename LVEC::size_type leftOffset, const bool leftreset, const RVEC &right, typename RVEC::size_type rightOffset, const bool rightreset, escript::ES_optype operation)' at line 1048 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1363: warning: no matching file member found for +void escript::binaryOpVectorTagged(&res, long samplesToProcess, long DPPSample, long DPSize, const &left, bool leftscalar, const &right, bool rightscalar, bool lefttagged, const escript::DataTagged &tagsource, escript::ES_optype operation) +Possible candidates: + 'void binaryOpVectorTagged(DataTypes::RealVectorType &res, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type DPPSample, const typename DataTypes::RealVectorType::size_type DPSize, const DataTypes::RealVectorType &left, const bool leftscalar, const DataTypes::RealVectorType &right, const bool rightscalar, const bool lefttagged, const DataTagged &tagsource, escript::ES_optype operation)' at line 340 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + 'void binaryOpVectorTagged(ResVEC &res, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type DPPSample, const typename ResVEC::size_type DPSize, const LVEC &left, bool leftscalar, const RVEC &right, bool rightscalar, bool lefttagged, const DataTagged &tagsource, escript::ES_optype operation)' at line 1264 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1415: warning: no matching file member found for +DataTypes::real_t escript::reductionOpVector(const &left, const std::vector< int > &leftShape, long offset, BinaryFunction operation, double initial_value) +Possible candidates: + 'DataTypes::real_t reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value)' at line 1397 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1448: warning: no matching file member found for +int escript::matrix_inverse(const &in, const std::vector< int > &inShape, long inOffset, &out, const std::vector< int > &outShape, long outOffset, int count, escript::LapackInverseHelper &helper) +Possible candidates: + 'int matrix_inverse(const DataTypes::RealVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::RealVectorType::size_type inOffset, DataTypes::RealVectorType &out, const DataTypes::ShapeType &outShape, DataTypes::RealVectorType::size_type outOffset, int count, LapackInverseHelper &helper)' at line 207 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1487: warning: no matching file member found for +bool escript::vectorHasNaN(const &in, long inOffset, size_t count) +Possible candidates: + 'bool vectorHasNaN(const DataTypes::RealVectorType &in, DataTypes::RealVectorType::size_type inOffset, size_t count)' at line 1473 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h + +> ]entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.tex>]/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1297: warning: no uniquely matching class member found for + void dudley::DudleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const +Possible candidates: + 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 516 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h + 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 518 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h + +/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1303: warning: no uniquely matching class member found for + void dudley::DudleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const +Possible candidates: + 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 516 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h + 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 518 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys +doc.cls +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [38]/build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp:139: warning: no matching class member found for + dim_t dudley::NodeFile::createDenseNodeLabeling(std::vector< index_t > &nodeDistribution, const std::vector< index_t > &dofDistribution) +Possible candidates: + 'dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' + 'dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' -[54] -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf - Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf - Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf - Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf - Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27 [55]] [29]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf - Ok [100] [109] [98] [99]> ]] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] -[45] [46] [42] [47] [60] [61] [62] [77] [79>] [87] [110] [91] [93] [94] [95] -[96] [56 [126] [127] [128]] [129] [130] &newNode, index_t offset) +Possible candidates: + 'void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)' + 'void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)' + + +Document Class: book 2020/04/10 v1.4m Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) +Chapter 2. + +LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. + + +LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. + + +LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. + +[39/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.cpp:1699: warning: no uniquely matching class member found for + void finley::FinleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const +Possible candidates: + 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h + 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 639 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h + +]/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.cpp:1705: warning: no uniquely matching class member found for + void finley::FinleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const +Possible candidates: + 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h + 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 639 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h + +) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty/build/reproducible-path/python-escript-5.6/paso/src/Options.cpp:31: warning: no matching class member found for + paso::Options::Options(const bp::object &options) +Possible candidates: + 'paso::Options::Options()' + 'paso::Options::Options(const boost::python::object &options)' + + [40] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty>)/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for + escript::Data ripley::Brick::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const +Possible candidates: + 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 193 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h + 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h + +] [33/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3737: warning: no uniquely matching class member found for + escript::Data ripley::Brick::randomFillWorker(const std::vector< int > &shape, long seed, const bp::tuple &filter) const +Possible candidates: + 'virtual escript::Data ripley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 279 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h + 'escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 337 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h + + [41]pdfTeX warning (ext4): destination +with the same identifier (name{figure.3.3}) has been already used, duplicate ig +nored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries}pdfTeX warning (ext4): destination with the s +ame identifier (name{figure.3.4}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} [184] [187] -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf ]] [49] [50] [29 [51 ] [29 ]] [52] [53] [59 [54] [55] [56 +3/posix/doc/inversion/figures//QLDMagDepthMu10.png (PNG copy)>] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp:2532: warning: no uniquely matching class member found for + escript::Data ripley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const +Possible candidates: + 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h + 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h + +Install file: "escriptcore/src/Pointers.h" as "debian/stage3/include/escript/Pointers.h" + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [30] +okJointDUMMY.tex Chapter 3. -)] [57]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf - Ok [185] [31] [178] [179 +[43] [30] +Chapter 3. +) [31] +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.tex]] [32 [170] [186])] -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf - Ok [188] [189] [190 [60]]) ) ) ) -Font metrics written on tctt1000.tfm. -Output written on tctt1000.600gf (128 characters, 19540 bytes). -Transcript written on tctt1000.log. +okDcRes.tex [32] + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the + +LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12 +1. + +[44 ] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.cpp:1262: warning: no uniquely matching class member found for + escript::Data speckley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const +Possible candidates: + 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h + 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h +)Install file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h" +Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h" + + +LaTeX Warning: Citation `NUMPY' on page 45 undefined on input line 150. + +[45] Chapter 4. LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. @@ -4937,32 +5404,64 @@ LaTeX Warning: Reference `fig:HalfSphere' on page 33 undefined on input line 39 . -[33] [61] [34 ] [62] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [63] -Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[64] -Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[][][][][][][][][][][][][][][][][][][][][][][][][] +[33] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)> +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty] [34] +Chapter 4. -) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex>]) [35] -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[65 [36]] [37] [38] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.texmktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated. +mple04.tex +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) + +LaTeX Warning: Citation `NETCDF' on page 47 undefined on input line 318. + +[47 ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) + +LaTeX Warning: Reference `sec:datamanager' on page 48 undefined on input line 3 +68. + +[48 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty + +LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38. + + +Underfull \hbox (badness 10000) in paragraph at lines 37--41 + +LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57. + + +[35] [49>]) [35]] [36] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty) [37] [38]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex [50] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) Chapter 5. LaTeX Warning: Reference `Chp:ref:regularization' on page 39 undefined on input @@ -5000,20 +5499,6 @@ [39] -LaTeX Warning: There were undefined references. - - -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. - - -Package rerunfilecheck Warning: File `install.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - -Underfull \hbox (badness 10000) in paragraph at lines 17--19 - - -LaTeX Warning: Reference `fig:onedhdmodel' on page 23 undefined on input line 2 -1. - - -LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34. - -[23]>] +ivers.tex +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty [40 ]a/src/RipleyNodes.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... +Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... +Building macro definition list... +Building group list... +Building directory list... +Building namespace list... +Building file list... +Building class list... +Computing nesting relations for classes... +Associating documentation with classes... +Building example list... +Searching for enumerations... +Searching for documented typedefs... +Searching for members imported via using declarations... +Searching for included using directives... +Searching for documented variables... +Building interface member list... +Building member list... +Searching for friends... +Searching for documented defines... +Computing class inheritance relations... +Computing class usage relations... +Flushing cached template relations that have become invalid... +Computing class relations... +Add enum values to enums... +Searching for member function documentation... +Creating members for template instances... +Building page list... +Search for main page... +Computing page relations... +Determining the scope of groups... +Sorting lists... +Determining which enums are documented +Computing member relations... +Building full member lists recursively... +Adding members to member groups. +Computing member references... +Inheriting documentation... +Generating disk names... +Adding source references... +Adding xrefitems... +Sorting member lists... +Setting anonymous enum type... +Computing dependencies between directories... +Generating citations pa LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 41 undef ined on input line 14. @@ -5119,11 +5659,8 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 41 undefined on input line 103. -[41 [67] -Output written on install.pdf (28 pages, 167202 bytes). -Transcript written on install.log. - [68] +[41)] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty [51)] [36 LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 42 undefined on input line 111. @@ -5197,8 +5734,14 @@ LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. -[42]cd debian/tmp3/posix/doc/install && makeindex install.idx - [69] +[42 +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.stypdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.1}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.139 \begin{python} + )] LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 213. @@ -5222,9 +5765,22 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 233. -)) [43] +) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)) [43] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty [52] +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44] [70 +mains.tex [44] +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +Underfull \vbox (badness 1348) has occurred while \output is active [53] +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h" +Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h" +Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h" + +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) Chapter 6. LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li @@ -5250,38 +5806,56 @@ LaTeX Warning: Reference `REF:FIG:REF:10' on page 45 undefined on input line 79 . -[45]] [46 ] [47 +[45] -LaTeX Warning: Reference `eqn:hddisc' on page 24 undefined on input line 71. +LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin +e 187. -LaTeX Warning: Reference `SEC BOUNDARY COND' on page 24 undefined on input line - 73. +LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 +. -[24 ...shipout:D \box_use:N \l_shipout_box -l.110 I - t is important to remark here that if a Dirichlet boundary condition is -]cd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex - [71] +l.194 \clearpage + -)Install file: "escriptcore/src/DataAbstract.h" as "debian/stage3/include/escript/DataAbstract.h" ->] [72]Install file: "escriptcore/src/DataConstant.h" as "debian/stage3/include/escript/DataConstant.h" -Install file: "escriptcore/src/DataException.h" as "debian/stage3/include/escript/DataException.h" +LaTeX Warning: Reference `chap:ripley' on page 54 undefined on input line 880. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.tex + +LaTeX Warning: Citation `gaussfilter' on page 54 undefined on input line 909. + +[54)]] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def [47) ] +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty [60]) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all_defs.tex LaTeX Warning: Reference `equ:ref:coordinates:100' on page 48 undefined on inpu t line 211. @@ -5298,45 +5872,38 @@ Underfull \hbox (badness 10000) in paragraph at lines 261--261 [][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t ion can be sup-ported by build-ing sub-classes of the -[48] - -LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l -ine 116. - - -LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li -ne 119. - - -LaTeX Warning: Float too large for page by 10.55325pt on input line 146. - -)Install file: "escriptcore/src/DataLazy.h" as "debian/stage3/include/escript/DataLazy.h" - [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2 -.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.108 \chapter - {Heat Diffusion in Two Dimensions} +))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty [61] +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) [49 +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment')] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex)) [50] +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi nimization.tex -Chapter 4. - -LaTeX Warning: Reference `LINEARPDE.SINGLE.3' on page 73 undefined on input lin -e 59. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 73 undefined on input lin -e 60. - +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux -LaTeX Warning: Reference `LINEARPDE.SINGLE.2' on page 73 undefined on input lin -e 60. +LaTeX Warning: Label `chap:flatpak' multiply defined. -[73] +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux) Chapter 7. LaTeX Warning: Reference `REF:EQU:INTRO 1' on page 51 undefined on input line 1 @@ -5352,7 +5919,13 @@ LaTeX Warning: Reference `Chp:ref:regularization' on page 51 undefined on input line 68. -[51] +[51 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux))Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h" +Install file: "escriptcore/src/IndexList.h" as "debian/stage3/include/escript/IndexList.h" + LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page 52 undefined on input line 96. @@ -5369,25 +5942,27 @@ LaTeX Warning: Reference `EQU:MIN:3b' on page 52 undefined on input line 111. -[52] - -LaTeX Warning: Reference `LINEARPDE.SINGLE.4' on page 74 undefined on input lin -e 132. - - -LaTeX Warning: Reference `CHAP: Tutorial' on page 74 undefined on input line 14 -6. +[52 +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii]Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h" -[74 +[Loading MPS to PDF converter (version 2006.09.02).] +)Install file: "escriptcore/src/DataVectorTaipan.h" as "debian/stage3/include/escript/DataVectorTaipan.h" + [62] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd)] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty LaTeX Warning: Reference `sec:LineSearch' on page 53 undefined on input line 22 6. [53] +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) [63] LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256. @@ -5395,11 +5970,12 @@ LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25 7. -) [54]Install file: "escriptcore/src/Pointers.h" as "debian/stage3/include/escript/Pointers.h" -Install file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h" - +) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty [54])) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.tex +stFunctions.tex) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) Chapter 8. LaTeX Warning: Reference `chapter:ref:Drivers' on page 55 undefined on input li @@ -5417,10 +5993,12 @@ LaTeX Warning: Reference `chapter:ref:Minimization' on page 55 undefined on inp ut line 12. -[55]Install file: "escriptcore/src/DataReady.h" as "debian/stage3/include/escript/DataReady.h" -Install file: "escriptcore/src/DataTagged.h" as "debian/stage3/include/escript/DataTagged.h" -Install file: "escriptcore/src/DataVectorOps.h" as "debian/stage3/include/escript/DataVectorOps.h" - +[55 +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)] [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg +uide.tex) [2] LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page 56 undefined on input line 61. @@ -5456,10 +6034,17 @@ LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input line 121. -[56entering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03>]Install file: "escriptcore/src/Assert.h" as "debian/stage3/include/escript/Assert.h" - +[56 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.toc +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[64]) [3]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.tex [4] +Chapter 1. +) [5] LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page 57 undefined on input line 181. @@ -5468,20 +6053,11 @@ LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page 57 undefined on input line 186. -[57 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.tex]Install file: "paso/src/Paso.h" as "debian/stage3/include/paso/Paso.h" -Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h" - - -LaTeX Warning: Citation `Trilinos' on page 75 undefined on input line 181. - - -Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 -\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- -di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt -ions -[75 +[57] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.tex [6] +Chapter 2. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty LaTeX Warning: Reference `chapter:ref:Minimization' on page 58 undefined on inp ut line 220. @@ -5494,9 +6070,8 @@ LaTeX Warning: Reference `REF:EQU:INTRO 2b' on page 58 undefined on input line 247. -[58]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys -doc.cls +[58]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in put line 281. @@ -5517,70 +6092,34 @@ LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in put line 344. -[59])>] [60]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4694: warning: no matching class member found for - DataTypes::CplxVectorType::reference Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' - 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' - -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for - DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' - 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' - - - -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 251. - - -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 256. - - -LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin -e 290. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin -e 290. - -[76 -[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.108 \chapter - {Heat Diffusion in Two Dimensions} dummy) const -Possible candidates: - 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - -) +taSources.tex [7] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.tex [8] +Chapter 3. +) [9] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.tex [10] +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[65 +Chapter 4. +) [11]] Chapter 9. LaTeX Warning: Reference `fig:domainBuilder' on page 61 undefined on input line 19. [61 ]Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h" - +n/figures//domainbuilder.pdf +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.tex [12]>] +Chapter 5. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [13]>] LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in put line 44. @@ -5597,8 +6136,7 @@ LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li ne 65. -[62] -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +[62] [14] LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. @@ -5610,14 +6148,13 @@ LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. -[64 - -LaTeX Warning: Reference `ESCRIPT CHAP' on page 78 undefined on input line 418. +[64] +Underfull \hbox (badness 10000) in paragraph at lines 159--160 -[78]] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h" +Underfull \hbox (badness 10000) in paragraph at lines 207--208 +[15] [66 LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on input line 309. @@ -5640,159 +6177,66 @@ LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in put line 359. -[65]Install file: "escriptcore/src/WrappedArray.h" as "debian/stage3/include/escript/WrappedArray.h" - +[65]] LaTeX Warning: Reference `eq:synthdata' on page 66 undefined on input line 430. -) [66] -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty - -LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474. - - -LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin -e 483. - -[79 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.tex -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))] -Chapter 10. - -LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28. - -[67]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for - DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const -Possible candidates: - 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const' - 'DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const' - -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1040: warning: no matching class member found for - DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' - 'DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' - - - -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. - ) +Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[16] -LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 530. +LaTeX Warning: Reference `eqn:Tform nabla' on page 39 undefined on input line 2 +00. -LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 581. +Underfull \hbox (badness 10000) in paragraph at lines 197--202 -[80]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:745: warning: no matching class member found for - DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' - 'DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:56: warning: no matching file member found for -void escript::DataTypes::pointToStream(std::ostream &os, const CplxVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) -Possible candidates: - 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h +LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 205. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for -void escript::DataTypes::pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) -Possible candidates: - 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for -std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< cplx_t > &data, const ShapeType &shape, int offset, const std::string &prefix) -Possible candidates: - 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h +LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 206. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for -void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< real_t > &dest, RealVectorType::size_type doffset, RealVectorType::size_type nvals, const RealVectorType &src, RealVectorType::size_type soffset) -Possible candidates: - 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:569: warning: no matching file member found for -void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< cplx_t > &dest, CplxVectorType::size_type doffset, CplxVectorType::size_type nvals, const CplxVectorType &src, CplxVectorType::size_type soffset) -Possible candidates: - 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h +LaTeX Warning: Reference `Sec:1DHDv0' on page 39 undefined on input line 213. -> &shape, int offset, const std::string &prefix) -Possible candidates: - 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:148: warning: no matching file member found for -void escript::DataTypes::copyPoint(&dest, long doffset, long nvals, const &src, long soffset) -Possible candidates: - 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h +LaTeX Warning: Reference `eq:hom flux' on page 39 undefined on input line 224. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h:265: warning: no matching class member found for - template < T > - escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(escript::DataTypes::DataVectorAlt< T >::long size, const DataVectorAlt< T >::value_type val, const DataVectorAlt< T >::size_type blockSize) -Possible candidates: - 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt()' - 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const DataVectorAlt< T > &other)' - 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const size_type size, const value_type val=0.0, const size_type blockSize=1)' -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:62: warning: no matching file member found for -void escript::matMult(const &left, const std::vector< int > &leftShape, long leftOffset, const &right, const std::vector< int > &rightShape, long rightOffset, &result, const std::vector< int > &resultShape) -Possible candidates: - 'void matMult(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type leftOffset, const DataTypes::RealVectorType &right, const DataTypes::ShapeType &rightShape, DataTypes::RealVectorType::size_type rightOffset, DataTypes::RealVectorType &result, const DataTypes::ShapeType &resultShape)' at line 39 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp +LaTeX Warning: Reference `NEUMAN 2' on page 39 undefined on input line 255. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:201: warning: no matching file member found for -void escript::hermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) -Possible candidates: - 'void hermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, DataTypes::CplxVectorType::size_type evOffset)' at line 916 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:220: warning: no matching file member found for -void escript::antihermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) -Possible candidates: - 'void antihermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::CplxVectorType::size_type evOffset)' at line 963 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp +LaTeX Warning: Reference `NEUMAN 2b' on page 39 undefined on input line 258. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:684: warning: no matching file member found for -void escript::eigenvalues(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset) -Possible candidates: - 'void eigenvalues(const DataTypes::RealVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::RealVectorType::size_type inOffset, DataTypes::RealVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::RealVectorType::size_type evOffset)' at line 639 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:925: warning: no matching file member found for -void escript::binaryOpVectorRightScalar(&res, long resOffset, long samplesToProcess, long sampleSize, const &left, long leftOffset, const double *right, bool rightreset, escript::ES_optype operation, bool singleleftsample) -Possible candidates: - 'void binaryOpVectorRightScalar(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::RealVectorType &left, typename DataTypes::RealVectorType::size_type leftOffset, const DataTypes::real_t *right, const bool rightreset, escript::ES_optype operation, bool singleleftsample)' at line 500 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp - 'void binaryOpVectorRightScalar(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LVEC &left, typename LVEC::size_type leftOffset, const RSCALAR *right, const bool rightreset, escript::ES_optype operation, bool singleleftsample)' at line 829 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h +LaTeX Warning: Reference `eq:inhom flux' on page 39 undefined on input line 258 +. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1032: warning: no matching file member found for -void escript::binaryOpVectorLeftScalar(&res, long resOffset, long samplesToProcess, long sampleSize, const double *left, bool leftreset, const &right, long rightOffset, escript::ES_optype operation, bool singlerightsample) -Possible candidates: - 'void binaryOpVectorLeftScalar(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::real_t *left, const bool leftreset, const DataTypes::RealVectorType &right, typename DataTypes::RealVectorType::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 639 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp - 'void binaryOpVectorLeftScalar(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LSCALAR *left, const bool leftreset, const RVEC &right, typename RVEC::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 941 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1139: warning: no matching file member found for -void escript::binaryOpVector(&res, long resOffset, long samplesToProcess, long sampleSize, const &left, long leftOffset, bool leftreset, const &right, long rightOffset, bool rightreset, escript::ES_optype operation) -Possible candidates: - 'void binaryOpVector(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::RealVectorType &left, typename DataTypes::RealVectorType::size_type leftOffset, const bool leftreset, const DataTypes::RealVectorType &right, typename DataTypes::RealVectorType::size_type rightOffset, const bool rightreset, escript::ES_optype operation)' at line 768 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp - 'void binaryOpVector(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LVEC &left, typename LVEC::size_type leftOffset, const bool leftreset, const RVEC &right, typename RVEC::size_type rightOffset, const bool rightreset, escript::ES_optype operation)' at line 1048 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h +LaTeX Warning: Reference `Sec:2DHD plot' on page 39 undefined on input line 266 +. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1363: warning: no matching file member found for -void escript::binaryOpVectorTagged(&res, long samplesToProcess, long DPPSample, long DPSize, const &left, bool leftscalar, const &right, bool rightscalar, bool lefttagged, const escript::DataTagged &tagsource, escript::ES_optype operation) -Possible candidates: - 'void binaryOpVectorTagged(DataTypes::RealVectorType &res, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type DPPSample, const typename DataTypes::RealVectorType::size_type DPSize, const DataTypes::RealVectorType &left, const bool leftscalar, const DataTypes::RealVectorType &right, const bool rightscalar, const bool lefttagged, const DataTagged &tagsource, escript::ES_optype operation)' at line 340 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp - 'void binaryOpVectorTagged(ResVEC &res, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type DPPSample, const typename ResVEC::size_type DPSize, const LVEC &left, bool leftscalar, const RVEC &right, bool rightscalar, bool lefttagged, const DataTagged &tagsource, escript::ES_optype operation)' at line 1264 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1415: warning: no matching file member found for -DataTypes::real_t escript::reductionOpVector(const &left, const std::vector< int > &leftShape, long offset, BinaryFunction operation, double initial_value) -Possible candidates: - 'DataTypes::real_t reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value)' at line 1397 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h +LaTeX Warning: Reference `fig:steady state heat' on page 39 undefined on input +line 269. -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1448: warning: no matching file member found for -int escript::matrix_inverse(const &in, const std::vector< int > &inShape, long inOffset, &out, const std::vector< int > &outShape, long outOffset, int count, escript::LapackInverseHelper &helper) -Possible candidates: - 'int matrix_inverse(const DataTypes::RealVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::RealVectorType::size_type inOffset, DataTypes::RealVectorType &out, const DataTypes::ShapeType &outShape, DataTypes::RealVectorType::size_type outOffset, int count, LapackInverseHelper &helper)' at line 207 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp +[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.276 \clearpage + [21] [72]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.tex [22] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex +Appendix A. +) [23] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.tex) - -LaTeX Warning: Citation `Trilinos' on page 85 undefined on input line 1043. - - -LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1051. - - -LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1054. - - -LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1057. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping -.tex +rwardModels.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.tex [24] +Appendix B. +(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [25] Chapter 12. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1297: warning: no uniquely matching class member found for - void dudley::DudleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const -Possible candidates: - 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 516 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h - 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 518 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h - -/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1303: warning: no uniquely matching class member found for - void dudley::DudleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const -Possible candidates: - 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 516 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h - 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 518 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h +rwardGravity.tex [26] +Underfull \vbox (badness 10000) has occurred while \output is active [27]) +[28] [70 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux)) +LaTeX Warning: There were multiply-defined labels. -LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 85 undefined on input lin -e 59. +Package rerunfilecheck Warning: File `install.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. -[85 -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty]) + ) +(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc} + &nodeDistribution, const std::vector< index_t > &dofDistribution) -Possible candidates: - 'dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' - 'dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' - - -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +[73]> LaTeX Warning: Reference `ref:GRAV:EQU:12' on page 74 undefined on input line 9 9. @@ -5971,9 +6367,12 @@ LaTeX Warning: Reference `ref:GRAV:EQU:9' on page 74 undefined on input line 16 4. -[74]> ]Install file: "paso/src/SystemMatrix.h" as "debian/stage3/include/paso/SystemMatrix.h" + [71 +Output written on install.pdf (28 pages, 170249 bytes). +Transcript written on install.log. +] LaTeX Warning: Reference `ref:GRAV:EQU:10' on page 75 undefined on input line 1 70. @@ -5982,27 +6381,31 @@ LaTeX Warning: Reference `ref:GRAV:EQU:201' on page 75 undefined on input line 194. -)/build/reproducible-path/python-escript-5.6/finley/src/ElementFile.cpp:205: warning: no matching class member found for - void finley::ElementFile::relabelNodes(const std::vector< index_t > &newNode, index_t offset) -Possible candidates: - 'void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)' - 'void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)' +) +LaTeX Warning: Citation `lazyauspdc' on page 72 undefined on input line 2248. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.tex/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.cpp:1699: warning: no uniquely matching class member found for - void finley::FinleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const -Possible candidates: - 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h - 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 639 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h +) [72] +Underfull \hbox (badness 10000) in paragraph at lines 18--25 + + +LaTeX Warning: Reference `example4' on page 41 undefined on input line 26. -/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.cpp:1705: warning: no uniquely matching class member found for - void finley::FinleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const -Possible candidates: - 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h - 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 639 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h +LaTeX Warning: Reference `fig:anticlinehrmodel' on page 41 undefined on input l +ine 28. +[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.74 l30= + Line(p3, p0) ] -Chapter 3. +[78 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 251. + + +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 256. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin +e 290. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin +e 290. + +[76]] [77] LaTeX Warning: Reference `ref:EQU:REG:6b' on page 79 undefined on input line 79 . @@ -6189,23 +6566,13 @@ 153. ) -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for - escript::Data ripley::Brick::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const -Possible candidates: - 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 193 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h - 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h -/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3737: warning: no uniquely matching class member found for - escript::Data ripley::Brick::randomFillWorker(const std::vector< int > &shape, long seed, const bp::tuple &filter) const -Possible candidates: - 'virtual escript::Data ripley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 279 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h - 'escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 337 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h +LaTeX Warning: Reference `ESCRIPT CHAP' on page 78 undefined on input line 418. +[78] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardSelfMagnetic.tex -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) LaTeX Warning: Reference `sec:forward magnetic' on page 80 undefined on input l ine 18. @@ -6246,7 +6613,21 @@ ine 74. [80] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) + +LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474. + + +LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin +e 483. + +[79] + +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 530. + + +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 581. + +[80] LaTeX Warning: Reference `ref:SELFREMAG:EQU:8' on page 81 undefined on input li ne 90. @@ -6275,97 +6656,106 @@ LaTeX Warning: Reference `ref:SELFREMAG:EQU:201A' on page 81 undefined on input line 155. -[81 -Underfull \hbox (badness 10000) in paragraph at lines 22--23 +[81] [81] [82 +LaTeX Warning: Reference `Chp:ref:coordinates' on page 82 undefined on input li +ne 179. -Underfull \hbox (badness 10000) in paragraph at lines 22--23 +LaTeX Warning: Reference `ref:SELFREMAG:EQU:9' on page 82 undefined on input li +ne 181. -LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 3 -0. +LaTeX Warning: Reference `ref:SELFREMAG:EQU:10' on page 82 undefined on input l +ine 191. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 32. +LaTeX Warning: Reference `ref:SELFREMAG:EQU:201' on page 82 undefined on input +line 225. -LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 4 -6. +)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rward2DMTTEMode.tex +LaTeX Warning: Citation `MKL' on page 83 undefined on input line 914. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 66. +LaTeX Warning: Citation `UMFPACK' on page 83 undefined on input line 919. -LaTeX Warning: Reference `eqn:hd' on page 27 undefined on input line 72. +LaTeX Warning: Reference `chap:finley' on page 83 undefined on input line 923. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 73. +[83] -[27]] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) +LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu +t line 18. -LaTeX Warning: Reference `Chp:ref:coordinates' on page 82 undefined on input li -ne 179. +[82] +LaTeX Warning: Citation `Saad' on page 84 undefined on input line 938. -LaTeX Warning: Reference `ref:SELFREMAG:EQU:9' on page 82 undefined on input li -ne 181. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 943. -LaTeX Warning: Reference `ref:SELFREMAG:EQU:10' on page 82 undefined on input l -ine 191. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 948. -LaTeX Warning: Reference `ref:SELFREMAG:EQU:201' on page 82 undefined on input -line 225. -) +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 952. -LaTeX Warning: Reference `eqn:commonform nabla' on page 28 undefined on input l -ine 87. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 973. -LaTeX Warning: Reference `eqn:hdgenf' on page 28 undefined on input line 98. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 977. -LaTeX Warning: Reference `eqn:commonform2D' on page 28 undefined on input line -102. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 981. -LaTeX Warning: Reference `ESCRIPT SET' on page 28 undefined on input line 113. +LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 985. -LaTeX Warning: Reference `eqn: kappa general' on page 28 undefined on input lin -e 125. -[28 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rward2DMTTEMode.texpdfTeX warning (ext4): destination with the same identifier (name{figure.3.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.141 \begin{python} - ]/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp:2532: warning: no uniquely matching class member found for - escript::Data ripley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const -Possible candidates: - 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h - 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h +LaTeX Warning: Citation `Saad' on page 84 undefined on input line 991. +LaTeX Warning: Citation `Saad' on page 84 undefined on input line 995. + + +LaTeX Warning: Citation `AMG' on page 84 undefined on input line 999. + + +LaTeX Warning: Citation `Saad' on page 84 undefined on input line 1004. + + +LaTeX Warning: Citation `RILU' on page 84 undefined on input line 1015. + +[84] + +LaTeX Warning: Citation `Trilinos' on page 85 undefined on input line 1043. -LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu -t line 18. -[82]) +LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1051. + + +LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1054. + + +LaTeX Warning: Citation `AMG' on page 85 undefined on input line 1057. + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping +.tex LaTeX Warning: Reference `ref:2DMTTE:EQU:3' on page 83 undefined on input line 80. [83 -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)]>] [87 &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const -Possible candidates: - 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h - 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h - - +okJointDUMMY.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co okDcRes.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In @@ -6452,13 +6877,11 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do mains.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.auxInstall file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h" -)Install file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h" -Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h" +nimization.aux)Install file: "escriptcore/src/NCHelper.h" as "debian/stage3/include/escript/NCHelper.h" +Install file: "escriptcore/src/SubWorld.h" as "debian/stage3/include/escript/SubWorld.h" -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da taSources.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re @@ -6466,10 +6889,7 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma pping.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.auxInstall file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h" -Install file: "escriptcore/src/ArrayOps.h" as "debian/stage3/include/escript/ArrayOps.h" -Install file: "escriptcore/src/ES_optype.h" as "debian/stage3/include/escript/ES_optype.h" -)) +rwardModels.aux)) LaTeX Warning: There were undefined references. @@ -6483,178 +6903,53 @@ ) (see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc}Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h" - -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))< - -LaTeX Warning: Reference `sec: plot T' on page 30 undefined on input line 243. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex1 +ist/fonts/enc/dvips/base/8r.enc}>] -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty> ) +/uhvb8a.pfb> -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -Output written on inversion.pdf (88 pages, 5248918 bytes). +1/urw/times/utmr8a.pfb>>Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h" +Install file: "debian/tmp3/posix/doc/install/install.pdf" as "debian/stage3/release/doc/install/install.r-2.pdf" + ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries} ]This is BibTeX, Version 0.99d (TeX Live 2020/Debian) The top-level auxiliary file: inversion.aux The style file: plain.bst Database file #1: inversion.bib ->]> patch level 4 -L3 programming layer <2021-01-09>) xparse <2020-03-03>) +L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all_defs.tex +version.tex>]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)>]) [33pdfTeX warning (ext4): destination -with the same identifier (name{figure.3.3}) has been already used, duplicate ig -nored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries}pdfTeX warning (ext4): destination with the s -ame identifier (name{figure.3.4}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries} -))) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_3D.cpp +) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty -Excluding comment 'comment') -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri -nfo.tex))) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) -Writing index file install.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux>])) [89 ]> +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty] [90 ] [90 ...shipout:D \box_use:N \l_shipout_box - -l.139 \begin{python} - ] -Chapter 1. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.styg++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_CopyNodalData.cpp ) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) [5] +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.tex [6] -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) -Chapter 2. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) - -LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin -e 187. - - -LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 -. - -[37] -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) [38pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.194 \clearpage - ] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.tex [8] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -Chapter 3. -)) [9] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.tex -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) [10] -Chapter 4. -) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty [11)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.tex [12] -Chapter 5. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty [13] +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) Chapter 5. 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[91] -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) [14]) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)g++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/dudleycpp.cpp + +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 89. @@ -6948,41 +7205,12 @@ LaTeX Warning: Reference `fig:PYCAD 1' on page 92 undefined on input line 158. -[92] -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) [93 -Underfull \hbox (badness 10000) in paragraph at lines 159--160 - - -Underfull \hbox (badness 10000) in paragraph at lines 207--208 - -[15 ] -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.texInstall file: "escriptcore/src/NCHelper.h" as "debian/stage3/include/escript/NCHelper.h" -Install file: "escriptcore/src/SubWorld.h" as "debian/stage3/include/escript/SubWorld.h" -Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h" -Install file: "escriptcore/src/IndexList.h" as "debian/stage3/include/escript/IndexList.h" - (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd)) -Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[16] -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg) +[92]) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) [93 +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty ]) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219. @@ -6990,64 +7218,28 @@ LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251. [94 ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de -fs.tex) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve -rinfo.tex) -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h" -Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h" +ures//trapezoid.pdf>]Install file: "paso/src/Functions.h" as "debian/stage3/include/paso/Functions.h" +Install file: "paso/src/UMFPACK.h" as "debian/stage3/include/paso/UMFPACK.h" +Install file: "paso/src/performance.h" as "debian/stage3/include/paso/performance.h" +Install file: "paso/src/MKL.h" as "debian/stage3/include/paso/MKL.h" +Install file: "paso/src/MUMPS.h" as "debian/stage3/include/paso/MUMPS.h" +Install file: "paso/src/Preconditioner.h" as "debian/stage3/include/paso/Preconditioner.h" -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) Excluding 'comment' comment. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux [17)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) [95 ] -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) [18 -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty] +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 339. LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 358. -[96Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h" - ] -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty [97]) [98] -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) +[96 ] [97] +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty [98]))) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty LaTeX Warning: Citation `GMSH' on page 99 undefined on input line 579. @@ -7055,16 +7247,12 @@ LaTeX Warning: Citation `RIGHTHANDRULE' on page 99 undefined on input line 600. -[99] [19] +[99]) LaTeX Warning: Citation `GMSH' on page 100 undefined on input line 682. -[100Install file: "paso/src/Options.h" as "debian/stage3/include/paso/Options.h" -] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [20Install file: "paso/src/Solver.h" as "debian/stage3/include/paso/Solver.h" - [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map +[100] +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698. @@ -7104,26 +7292,20 @@ LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742. -[101]Install file: "paso/src/SparseMatrix.h" as "debian/stage3/include/paso/SparseMatrix.h" -}]]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex [21 [2]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.tex) [102] [3] [4] [22]) -Appendix A. -) [103] [23] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.toc +[101] +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) [102)]) [103] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [104] [5] +tex) [104] +\@input{elist.aux} + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el +ist.tex Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess olver.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.tex [24]>]) [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex LaTeX Warning: Reference `Stokes 1' on page 105 undefined on input line 50. @@ -7143,17 +7325,9 @@ LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 88. -[105] -Appendix B. -(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) - -LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. - - -LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. - - -) [7 [25]] [8] [9] [10] +[105] (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li ne 95. @@ -7205,11 +7379,7 @@ LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li ne 169. -[106] [26] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.tex -Underfull \vbox (badness 10000) has occurred while \output is active [27]) -[28] +[106] (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty LaTeX Warning: Reference `STOKES total V1' on page 107 undefined on input line 187. @@ -7243,35 +7413,10 @@ . [107 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.aux)) - -LaTeX Warning: There were multiply-defined labels. - +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)]g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_addToSystemMatrix.cpp -Package rerunfilecheck Warning: File `install.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - ...shipout:D \box_use:N \l_shipout_box - -l.276 \clearpage - <)/usr/s -hare/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb> -Output written on install.pdf (28 pages, 170169 bytes). -Transcript written on install.log. - [12 ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.texg++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_2D.cpp - [112 ]) -Underfull \hbox (badness 10000) in paragraph at lines 18--25 - - -LaTeX Warning: Reference `example4' on page 41 undefined on input line 26. - - -LaTeX Warning: Reference `fig:anticlinehrmodel' on page 41 undefined on input l -ine 28. +[111] +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.aux [112 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.aux) ...shipout:D \box_use:N \l_shipout_box - -l.74 l30= - Line(p3, p0) ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.aux)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.aux LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 28. @@ -7463,7 +7555,7 @@ LaTeX Warning: Reference `IKM-EQU-2' on page 113 undefined on input line 61. -[113] +[113))] LaTeX Warning: Reference `IKM-EQU-3' on page 114 undefined on input line 91. @@ -7493,6 +7585,11 @@ LaTeX Warning: Reference `IKM-EQU-45' on page 114 undefined on input line 158. [114] +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +) LaTeX Warning: Citation `LBB' on page 115 undefined on input line 206. @@ -7505,7 +7602,8 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex +stem.tex (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) LaTeX Warning: Reference `FAULTSYSTEM2D' on page 116 undefined on input line 39 . @@ -7520,25 +7618,16 @@ LaTeX Warning: Reference `eq:2D line 1' on page 117 undefined on input line 144 . -[117]>] [13 ] +[117g++ -o debian/tmp3/posix/dudley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DomainFactory.cpp +] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) LaTeX Warning: Reference `eq:2D line 3' on page 118 undefined on input line 169 . -[118g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp -] - -LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. - -[14] [15 ] +[118] +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) LaTeX Warning: Reference `eq:2D line 3' on page 119 undefined on input line 307 . @@ -7547,32 +7636,7 @@ LaTeX Warning: Reference `eq:2D line 4d' on page 119 undefined on input line 30 7. -[119] - -LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. - - -LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. - - - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. - -[16] - -LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. - - -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. - - -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336. - -[17] [18] +[119]) LaTeX Warning: Reference `eq:2D line 3' on page 120 undefined on input line 325 . @@ -7584,9 +7648,15 @@ LaTeX Warning: Reference `Slip CHAP' on page 120 undefined on input line 383. -)) [120] +) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)) [120] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex +tex [1g++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_LumpedSystem.cpp +{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do +cguide.tex [2 Chapter 7. LaTeX Warning: Reference `sec:dudley' on page 121 undefined on input line 29. @@ -7617,8 +7687,9 @@ LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 109 . -[121]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_3D.cpp - +[121])] [3] [4] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.toc [5]) LaTeX Warning: Reference `FINLEY FIG 01' on page 122 undefined on input line 13 6. @@ -7643,44 +7714,39 @@ Underfull \vbox (badness 1226) has occurred while \output is active [122 ] [123 ] [124] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex +x/doc/user/figures//FinleyContact.pdf [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.tex>] [124] -LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504. +LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. -LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504. +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. -LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516. - +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye +lements.tex [7] [8] [9] [10] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.tex) [125] [126]g++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_NodeCoordinates.cpp -LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 517. +Chapter 1. +Underfull \hbox (badness 10000) in paragraph at lines 54--54 +[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ +\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file -LaTeX Warning: Citation `GOCAD' on page 19 undefined on input line 529. +Underfull \hbox (badness 10000) in paragraph at lines 65--65 +[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion + ob-tained by in-ver-sion of file +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76 +. -LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631. -[19)] [20 ] [21 ] [22 ] +5.6/debian/tmp3/posix/doc/user/figures//FinleyMacroRec.pdf>]) LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 444. LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 456. -[128]) [129] +[128]) [129 [12 [132] ]) [23] +[131] [132 ] LaTeX Warning: Reference `fig:ripleyrect' on page 133 undefined on input line 1 57. ) [133] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.tex (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [24] [134]g++ -o debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_AverageElementData.cpp - -Chapter 2. +y.tex [134]g++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getNormal.cpp -Underfull \hbox (badness 10000) in paragraph at lines 7--7 -[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ -OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file -[25] [26 ] [13 ] LaTeX Warning: Citation `GOCAD' on page 138 undefined on input line 136. @@ -7873,10 +7841,45 @@ LaTeX Warning: Reference `ELASTIC CHAP' on page 139 undefined on input line 182 . -[139]Install file: "debian/tmp3/posix/doc/install/install.pdf" as "debian/stage3/release/doc/install/install.r-2.pdf" -) [140] +[139] + +LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. + +[14] [15 ]) [140] + +LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. + + +LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. + + + +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) + +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. + +[16] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino s.tex + +LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. + + +LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. + + +LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336. + +[17] [18] Chapter 11. LaTeX Warning: Citation `TrilinosWeb' on page 141 undefined on input line 18. @@ -7890,22 +7893,14 @@ LaTeX Warning: Reference `simplemesh' on page 141 undefined on input line 33. -[141]Install file: "paso/src/Functions.h" as "debian/stage3/include/paso/Functions.h" -Install file: "paso/src/MUMPS.h" as "debian/stage3/include/paso/MUMPS.h" -Install file: "paso/src/MKL.h" as "debian/stage3/include/paso/MKL.h" - +[141] LaTeX Warning: Reference `basic' on page 142 undefined on input line 84. LaTeX Warning: Reference `basic' on page 142 undefined on input line 114. -[142]> ]Install file: "paso/src/UMFPACK.h" as "debian/stage3/include/paso/UMFPACK.h" -Install file: "paso/src/performance.h" as "debian/stage3/include/paso/performance.h" - +[142] LaTeX Warning: Reference `basic' on page 143 undefined on input line 124. @@ -7942,49 +7937,57 @@ LaTeX Warning: Reference `basicAMG' on page 144 undefined on input line 206. -[144] [145]g++ -o debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getAssembleParameters.cpp +[144] + +LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504. -LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. +LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504. -LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97. +LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516. -) [27] [28 ] [21 ] [145] [22 ] [29 ] +[146] [147]>]) [23] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [30] -Chapter 3. -) [31] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.tex [32]g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_addToSystemMatrix.cpp - -Chapter 4. - -LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. - -[33] [147] [34 ]) [35] +[149]) [150] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.tex [36] [37] [38] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.tex +c.tex Chapter 12. LaTeX Warning: Citation `Sympy' on page 151 undefined on input line 20. -Underfull \vbox (badness 10000) has occurred while \output is active [151] -Chapter 5. - -LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. - -[39] - -LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr -ivers.tex [40 ] - -LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71. - -[41] +Underfull \vbox (badness 10000) has occurred while \output is active [151]> ] LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 72. @@ -8052,139 +8038,142 @@ LaTeX Warning: Reference `symbolic eq2' on page 152 undefined on input line 87. -[152]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_CopyNodalData.cpp +[152]>] - -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124. +LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. +LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97. -[42])) [43] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44] -Chapter 6. +) [27] [28 ] [29 +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] -LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line -48. +LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line + 127. -[45] +[42 ] [43pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.5}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.134 \clearpage + ] [47 ]> -] [52] +[33] [154 [34] ...shipout:D \box_use:N \l_shipout_box + +l.199 \clearpage + ]) [35] [36] [37] [38] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex +Chapter 5. +LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. -LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25 -7. +[39]> -)) [156] [54] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.tex -Chapter 8. -[55] +LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79. -LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83. -[56 -Chapter 13. -[157]] [57] [58] [59]) [60] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr +ivers.tex +]> ] [62] +[41] -LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. +LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124. -[63 [159]]) -LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. +LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. -[64] [160] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.tex +[42>]])) [43] [155] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.tex) [44] [156] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.tex> ] -LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328. +LaTeX Warning: Reference `splitworldClass' on page 158 undefined on input line +82. -[65] +[158] [47 ]] [167]>] LaTeX Warning: Reference `sec:interpolation' on page 168 undefined on input lin e 228. -[168) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.tex] - 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To sho +w sub-domains, we need to go back to [] + +LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line +284. -[86])) [87] [88]) +[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.7}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.291 \clearpage + )) +x.aux)) LaTeX Warning: There were undefined references. @@ -8333,96 +8295,51 @@ ) (see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc}>>>>>]>>>> ->>] [58cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex -< +t/fonts/type1/public/amsfonts/symbols/msbm10.pfb> [59])< /usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>< +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.tex/usr/share/texlive/texmf-dist/fonts/ty pe1/urw/times/utmb8a.pfb>This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. - -Output written on user.pdf (176 pages, 2592705 bytes). -Transcript written on user.log. -cd debian/tmp3/posix/doc/user && bibtex user -entering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.texThis is BibTeX, Version 0.99d (TeX Live 2020/Debian) -The top-level auxiliary file: user.aux -The style file: plain.bst -Database file #1: esys.bib - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.clscd debian/tmp3/posix/doc/user && makeindex user.idx - -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.styThis is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). -Scanning input file user.idx....done (716 entries accepted, 12 rejected). -Sorting entries........done (7112 comparisons). -Generating output file user.ind....done (353 lines written, 0 warnings). -Output written in user.ind. -Transcript written in user.ilg. - -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)rating code for file CrossDomainCoupler.h... +/texmf-dist/fonts/type1/urw/times/utmri8a.pfb> +Chapter 9. +[61 ]rating code for file CrossDomainCoupler.h... Parsing code for file Data.cpp... Generating code for file Data.h... Parsing code for file DataAbstract.cpp... @@ -8517,180 +8434,182 @@ Generating code for file FinleyException.h... Parsing code for file FinleyNodes.cpp... 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duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.177 \clearpage + +))) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de +fs.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve +rinfo.tex))> ] [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map +Writing index file 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+(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.tex + +LaTeX Warning: Reference `fig:ex10mgeo' on page 82 undefined on input line 348. + + + +LaTeX Warning: Reference `fig:ex10mmsh' on page 82 undefined on input line 379. + + +[82] [5 [83pdfTeX warning (ext4): destination with the same identifier (name{figur +e.8.8}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.406 \clearpage + pdfTeX warning (ext4): destination with the same identifier (na +me{figure.8.9}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.406 \clearpage + ] +]) [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to +c +LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin +e 427. + + +LaTeX Warning: Reference `fig:ex10q boundeff zoom' on page 84 undefined on inpu +t line 427. + + +LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin +e 443. + +[84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 +0}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.449 \clearpage + ] [85pdfTeX warning (ext4): destinatio +n with the same identifier (name{figure.8.11}) has been already used, duplicate + ignored + ...shipout:D \box_use:N \l_shipout_box + +l.449 \clearpage + ]) [86] +Chapter 9. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple11.tex [7 +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii + +Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line +24. + + +Underfull \hbox (badness 10000) in paragraph at lines 61--62 + + +Underfull \hbox (badness 10000) in paragraph at lines 61--62 + + +Package natbib Warning: Citation `Farias2010' on page 87 undefined on input lin +e 73. + + +Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line + 73. + +)] +[Loading MPS to PDF converter (version 2006.09.02).] +) +No file cookbook.bbl. + +Package natbib Warning: There were undefined citations. + +[87] [88pdfTeX warning (ext4): destination with the same identifier (name{figur +e.9.1}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.141 \end{document} + ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook.aux) + +LaTeX Warning: There were undefined references. + + +LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. + + +Package rerunfilecheck Warning: File `cookbook.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information)pdfTeX warning (dest): name +{Hfootnote.36} has been referenced but does not exist, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.35} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.34} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.33} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.32} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.31} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.30} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.29} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.28} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.27} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.26} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.25} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.24} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.23} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.22} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.21} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.20} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.19} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.18} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.17} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.16} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.15} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.14} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.13} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.12} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.11} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.10} has been referenced but does not exis +t, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.9} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.8} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.7} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.6} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.5} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.4} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.3} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.2} has been referenced but does not exist +, replaced by a fixed one + +pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist +, replaced by a fixed one + +{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}]< [9/usr/share/texlive +/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb)>]) [10] +Output written on cookbook.pdf (88 pages, 4380610 bytes). +Transcript written on cookbook.log. + +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.stycd debian/tmp3/posix/doc/cookbook && bibtex cookbook +ile FinleyVersion.h... Parsing code for file FluxLimiter.cpp... Generating code for file FluxLimiter.h... Parsing code for file Functions.cpp... @@ -8940,68 +9493,134 @@ Parsing code for file Pattern_reduceBandwidth.cpp... Parsing code for file PCG.cpp... Parsing code for file performance.cpp... -Generating code for fi [2]) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -[4] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex [5]) [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to -c [7] [8] [9]) [10] +Generating code for fi (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria lPDE.tex +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst -ep.tex [11 ] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.mapThis is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). +Scanning input file cookbook.idx....done (2 entries accepted, 0 rejected). +Sorting entries....done (2 comparisons). +Generating output file cookbook.ind....done (9 lines written, 0 warnings). +Output written in cookbook.ind. +Transcript written in cookbook.ilg. +} LaTeX Warning: Citation `Zienc' on page 12 undefined on input line 148. 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[61 ] [62] [63] [64] [65]) [66 [66]] +n/figures//domainbuilder.pdf> +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty]) [62] [63] +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) [64)] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd [65)] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd [66]) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re gularization.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc +guide.tex [2 Chapter 10. -[67] [68]) [69] +[67])] [3] [4] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur +rentdev.tex [5 [68]) [6]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook.toc [69] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.tex [67 [70]] [68 +pping.tex [70 [7]]) [8] Chapter 11. -[71] ]) [72] +[71] +Chapter 1. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int +ro.tex) [72] [9 (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardModels.tex Chapter 12. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex [73] [74]) +rwardGravity.tex>]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui +ckstart.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc +pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd [73]) [74)) [10]]) +Chapter 2. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple01.tex (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.tex [69 [75pdfTeX warning ( -ext4): destination with the same identifier (name{figure.7.1}) has been already - used, duplicate ignored +rwardMagnetic.tex)) [39 [75 ...shipout:D \box_use:N \l_shipout_box -l.186 \clearpage - ]] [76] [77]) +l.47 \end{equation} + ] [76] [12]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_CopyNodalData.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [77]) +Underfull \hbox (badness 4353) in paragraph at lines 185--185 +[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able +at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound +ary _ +[13] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardMagneticIntensity.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [78] [14pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] [15pdfTeX warning (ext4): destination with the same identi +fier (name{figure.2.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] [81] [16]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardSelfMagnetic.tex [80] [81]) +rward2DMTTEMode.tex [82] [83)]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rward2DMTTEMode.tex [82] [83]ile Taipan.cpp... +rwardDCRES.tex [84] [85] [86])) [87] [88] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.ind +Underfull \hbox (badness 10000) in paragraph at lines 415--425 + +[17] [89]) [90] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.bbl [91ile Taipan.cpp... 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Generating docs for file Assemble_PDE_Single_3D.cpp... -Ge -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - - -Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -))>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardDCRES.tex [70 [84]] [71 [85]] [72] [86])) [87] -Chapter 8. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex [88] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.ind [89]) [90] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.bbl - -Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li -ne 27. - - -LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 33. - - -LaTeX Warning: Reference `eqn:ex10a' on page 73 undefined on input line 42. - - -LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 46. - -[73 [91]]) [92] +Ge]) [92] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in version.aux (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in @@ -9581,18 +10154,17 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In troPart2.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux)) [74 +mains.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux]) +nimization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co stFunctions.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da taSources.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux)) +gularization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux [39) +Underfull \hbox (badness 10000) in paragraph at lines 604--605 + + +Underfull \hbox (badness 10000) in paragraph at lines 604--605 + +[19]>< +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [40 [20/usr/share/texlive/texmf-dist +/fonts/type1/urw/courier/ucrr8a.pfb]>pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.4}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.680 \clearpage + ] -Output written on inversion.pdf (92 pages, 5275529 bytes). +r8a.pfb> [42]> +Output written on inversion.pdf (92 pages, 5275436 bytes). Transcript written on inversion.log. -nerating docs for file Assemble_PDE_Single_3D.cpp... +]nerating docs for file Assemble_PDE_Single_3D.cpp... Generating docs for file Assemble_PDE_Single_C.cpp... Generating docs for file Assemble_PDE_System_1D.cpp... Generating docs for file Assemble_PDE_System_2D.cpp... @@ -9722,37 +10316,62 @@ Generating docs for file ElementFile.h... Generating docs for file ElementFile.h... Generating docs for file ElementFile_createColoring.cpp... -Generating docs for file ElementFile_d -Underfull \hbox (badness 10000) in paragraph at lines 93--97 +Generating docs for file ElementFile_d) [43] [44] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.texInstall file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf" +Chapter 3. +[45]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/dudleycpp.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ -LaTeX Warning: Reference `fig:mayavi2openfile' on page 75 undefined on input li -ne 132. +Underfull \hbox (badness 10000) in paragraph at lines 684--692 -LaTeX Warning: Reference `fig:mayavi2data' on page 75 undefined on input line 1 -35. +LaTeX Warning: Float too large for page by 10.55325pt on input line 775. + +[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.5}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.776 \clearpage + instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the -LaTeX Warning: Reference `fig:mayavi2cell2point' on page 75 undefined on input -line 143. +LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83. +[46 ] -LaTeX Warning: Reference `fig:ex10pot' on page 75 undefined on input line 147. +LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150. -[75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur -e.8.1}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.177 \clearpage - pdfTeX warning (ext4): destination with the same identifier (na -me{figure.8.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.177 \clearpage - ]>] [50]file MultiBrick.h... Generating docs for file MultiRectangle.cpp... Generating docs for file MultiRectangle.h... Generating docs for file MUMPS.cpp... @@ -9936,102 +10562,132 @@ Generating docs for file SparseMatrix_MatrixMatrixTranspose.cpp... Generating docs for file SparseMatrix_MatrixVector.cpp... Generating docs for file SparseMatrix_nullifyRowsAndCols.cpp... -Generating docs > ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex [40] -Chapter 2. - -LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46. +Generating docs [51] [52] +Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[][][][][][][][][][][][][][][][][][][][][][][][][] +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple02.tex [53] +Underfull \hbox (badness 10000) in paragraph at lines 17--19 +[23] [54] +Underfull \vbox (badness 1348) has occurred while \output is active [55] [24pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.6}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.109 \end{python} + ] -LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47. +LaTeX Warning: Citation `gaussfilter' on page 56 undefined on input line 909. -[41] [42]) [43] [44] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.tex/build/reproducible-path/python-escript-5.6/dudley/src/DomainFactory.cpp:689: warning: The following parameters of dudley::brick(escript::JMPI jmpi, dim_t n0=1, dim_t n1=1, dim_t n2=1, int order=1, double l0=1.0, double l1=1.0, double l2=1.0, bool periodic0=false, bool periodic1=false, bool periodic2=false, int integrationOrder=-1, int reducedIntegrationOrder=-1, bool useElementsOnFace=false, bool useFullElementOrder=false, bool optimize=false) are not documented: +[56]/build/reproducible-path/python-escript-5.6/dudley/src/DomainFactory.cpp:689: warning: The following parameters of dudley::brick(escript::JMPI jmpi, dim_t n0=1, dim_t n1=1, dim_t n2=1, int order=1, double l0=1.0, double l1=1.0, double l2=1.0, bool periodic0=false, bool periodic1=false, bool periodic2=false, int integrationOrder=-1, int reducedIntegrationOrder=-1, bool useElementsOnFace=false, bool useFullElementOrder=false, bool optimize=false) are not documented: parameter 'periodic0' parameter 'periodic1' parameter 'periodic2' parameter 'useElementsOnFace' parameter 'useFullElementOrder' + [57 -Chapter 3. -[45] -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the - -LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83. - -[46 ] - -LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150. +LaTeX Warning: Float too large for page by 10.55325pt on input line 146. -[47]>] [77pdfTeX w -arning (ext4): destination with the same identifier (name{figure.8.3}) has been - already used, duplicate ignored +)] [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2 +.7}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.177 \clearpage - pdfTeX warning (ext4): destination with the same identifier (na -me{figure.8.4}) has been already used, duplicate ignored +l.108 \chapter + {Heat Diffusion in Two Dimensions} ] +[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 +}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.177 \clearpage - ] [50] [51] [52] [53] [54] -Underfull \vbox (badness 1348) has occurred while \output is active [55]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1381: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1397: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented: - parameter 'leftShape' +] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65] +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[66]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from debian/stage3/include/dudley/DudleyDomain.h:51, + from debian/stage3/include/dudley/DomainFactory.h:21, + from dudley/src/DomainFactory.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +> instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [68]> ] +Chapter 3. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple03.tex [72] +Underfull \hbox (badness 10000) in paragraph at lines 22--23 -LaTeX Warning: Citation `gaussfilter' on page 56 undefined on input line 909. -[56] [57] [58]> ] [59] [60] [61] [62] -Underfull \hbox (badness 10000) in paragraph at lines 180--184 +Underfull \hbox (badness 10000) in paragraph at lines 22--23 +[27]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1381: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1397: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented: + parameter 'leftShape' + [28pdfTeX warning (ext4): destination with the same identifier (name{figur +e.3.1}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.141 \begin{python} + ] -LaTeX Warning: Reference `fig:ex10bpot' on page 78 undefined on input line 205. +LaTeX Warning: Float too large for page by 12.55325pt on input line 232. +[29 [73]] +LaTeX Warning: Citation `lazyauspdc' on page 74 undefined on input line 2248. -LaTeX Warning: Reference `fig:ex10bpot2' on page 78 undefined on input line 215 -. +) [74] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) +Chapter 4. +[75] +Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -LaTeX Warning: Reference `fig:ex10p' on page 78 undefined on input line 218. +Underfull \hbox (badness 10000) in paragraph at lines 306--311 -[78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur -e.8.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.246 \clearpage - pdfTeX warning (ext4): destination with the same identifier (na -me{figure.8.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.246 \clearpage - ] -[80pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.246 \clearpage - ] [63]for file SparseMatrix_saveHB.cpp... +[30] [76]for file SparseMatrix_saveHB.cpp... Generating docs for file Speckley.h... Generating docs for file speckleycpp.cpp... Generating docs for file SpeckleyDomain.cpp... @@ -10122,268 +10778,13 @@ Generating docs for namespace escript Generating docs for compound escript::AbstractContinuousDomain... Generating docs for compound escript::AbstractDomain... -Generati -Underfull \hbox (badness 10000) in paragraph at lines 275--281 - -[81 [64]] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65] -Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[66]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1600: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: - parameter 'dummy' - -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[67]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:654: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:611: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented: - parameter 'dummy' - - -LaTeX Warning: Reference `fig:ex10mgeo' on page 82 undefined on input line 348. - - - -LaTeX Warning: Reference `fig:ex10mmsh' on page 82 undefined on input line 379. - - -[82]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:625: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' - [83pdfTeX warning (ext4): destination with the same identifier (name{figur -e.8.8}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.406 \clearpage - pdfTeX warning (ext4): destination with the same identifier (na -me{figure.8.9}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.406 \clearpage - ] - [68] -LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin -e 427. - - -LaTeX Warning: Reference `fig:ex10q boundeff zoom' on page 84 undefined on inpu -t line 427. - - -LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin -e 443. - -[84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 -0}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.449 \clearpage - ] [85pdfTeX warning (ext4): destinatio -n with the same identifier (name{figure.8.11}) has been already used, duplicate - ignored - ...shipout:D \box_use:N \l_shipout_box - -l.449 \clearpage - ]) [86] -Chapter 9. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex [70] [71] - -Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line -24. - - -Underfull \hbox (badness 10000) in paragraph at lines 61--62 - - -Underfull \hbox (badness 10000) in paragraph at lines 61--62 - - -Package natbib Warning: Citation `Farias2010' on page 87 undefined on input lin -e 73. - - -Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line - 73. - -) -No file cookbook.bbl. - -Package natbib Warning: There were undefined citations. - -[87] [88pdfTeX warning (ext4): destination with the same identifier (name{figur -e.9.1}) has been already used, duplicate ignored +Generati) [31] [32pdfTeX warning (ext4): destination with the same identifier (name +{figure.3.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.141 \end{document} - ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux) - -LaTeX Warning: There were undefined references. - - -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. - - -Package rerunfilecheck Warning: File `cookbook.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information)pdfTeX warning (dest): name -{Hfootnote.36} has been referenced but does not exist, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.35} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.34} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.33} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.32} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.31} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.30} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.29} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.28} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.27} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.26} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.25} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.24} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.23} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.22} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.21} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.20} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.19} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.18} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.17} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.16} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.15} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.14} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.13} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.12} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.11} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.10} has been referenced but does not exis -t, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.9} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.8} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.7} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.6} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.5} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.4} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.3} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.2} has been referenced but does not exist -, replaced by a fixed one - -pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist -, replaced by a fixed one - -{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} [72 -Chapter 4. -[75] -Output written on cookbook.pdf (88 pages, 4380531 bytes). -Transcript written on cookbook.log. - [76]cd debian/tmp3/posix/doc/cookbook && bibtex cookbook - +l.112 \chapter + {Complex Geometries} + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [80]> instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [81] LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 530. LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 581. -[82] [83]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex - [84] +[82] [83] [84] LaTeX Warning: Citation `MKL' on page 85 undefined on input line 914. LaTeX Warning: Citation `UMFPACK' on page 85 undefined on input line 919. -[85] +[85]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1600: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: + parameter 'dummy' + LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938. @@ -10458,7 +10877,10 @@ LaTeX Warning: Citation `RILU' on page 86 undefined on input line 1015. -[86] +[86]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:654: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy -sdoc.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))>/build/reproducible-path/python-escript-5.6/escriptcore/src/EsysMPI.h:97: warning: explicit link request to 'CPUs' could not be resolved -] [89 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [88 instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +>] [33pdfTeX warning (ext4): destination +with the same identifier (name{figure.3.3}) has been already used, duplicate ig +nored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries}pdfTeX warning (ext4): destination with the s +ame identifier (name{figure.3.4}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} ] [89 ] [34] +Chapter 4. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple04.tex +Underfull \hbox (badness 10000) in paragraph at lines 37--41 -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:532: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian) +[35In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_addToSystemMatrix.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_NodeCoordinates.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +> instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [36pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.1}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.139 \begin{python} + ] [37] [38pdfTeX warning (ext4): destina +tion with the same identifier (name{figure.4.2}) has been already used, duplica +te ignored + ...shipout:D \box_use:N \l_shipout_box + +l.194 \clearpage + ]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:419: warning: The following parameter of escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:514: warning: The following parameter of escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' + [90 ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_getAssembleParameters.cpp:24: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty> ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) [90 ...shipout:D \box_use:N \l_shipout_box + +l.276 \clearpage + ])) +[91 ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex +Underfull \hbox (badness 10000) in paragraph at lines 18--25 + +[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.74 l30= + Line(p3, p0) + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +> instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE.cpp:48: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:161: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented: parameter 'L0' parameter 'L1' - -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +>] [92 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty>/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ - ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +exng docs for compound escript::AbstractReducer... Generating docs for compound escript::AbstractSystemMatrix... Generating docs for compound escript::AbstractTransportProblem... Generating docs for compound escript::FMax... @@ -10640,96 +11238,12 @@ Generating docs for compound paso::MUMPS_Handler_t... Generating docs for compound paso::MUMPS_Handler... Generating docs for compound paso::MUMPS_Handler< double >... -Generating docs for compound >]) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)) -[91 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)> -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) ] [92 -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +Generating docs for compound Chapter 5. LaTeX Warning: Citation `GMSH' on page 93 undefined on input line 24. -[93]/build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h:43: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' - -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_Single_2D.cpp:38: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +[93] LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 89. @@ -10742,68 +11256,17 @@ LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 154. -[94] -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h:43: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_AverageElementData.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -) [95 ] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:48: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: +[94] [95 ] [96 ]/build/reproducible-path/python-escript-5.6/ripley/src/Brick.h:48: warning: The following parameters of ripley::Brick::Brick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' - (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [96 ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) [97 ] -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) [98 ] [98 -] [99 -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty]) [100] -(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty +] [99] [100] LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 579. @@ -10811,13 +11274,17 @@ LaTeX Warning: Citation `RIGHTHANDRULE' on page 101 undefined on input line 600 . -[101 -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)] +[101]/build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h:43: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' + LaTeX Warning: Citation `GMSH' on page 102 undefined on input line 682. [102] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 698. @@ -10857,21 +11324,19 @@ LaTeX Warning: Citation `NETGEN' on page 103 undefined on input line 742. -[103])) [104])/build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:46: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' +[103] [104]) [105] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +tex [106]/build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h:43: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' - [105] -(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [106] + parameter 'subdivisions' + Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess olver.tex -(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 107 undefined on input line 69. @@ -10879,95 +11344,23 @@ LaTeX Warning: Citation `MBENZI2005' on page 107 undefined on input line 69. -[107]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_System_2D.cpp:41: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +[107] LaTeX Warning: Citation `ELMAN' on page 108 undefined on input line 148. -[108]) [109]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_integrate.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [110] -(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty) -\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l -of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli -st.tex - -LaTeX Warning: Citation `LBB' on page 111 undefined on input line 334. - -[111] (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -) -\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g -def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} -)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl -ux.tex (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty [112)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver -info.tex) [113]/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' +[108] [109] [110/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:48: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' +] -Writing index file cookbook.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) [114 ]) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 28. @@ -10976,47 +11369,27 @@ [115] [116] -LaTeX Warning: Label `NEUMAN 2b' multiply defined. - - -LaTeX Warning: Label `fig:ex08pw' multiply defined. - - -LaTeX Warning: Label `fig:gmsh3dmsh' multiply defined. - - -LaTeX Warning: Label `sub@fig:gmsh3dmsh' multiply defined. - - -LaTeX Warning: Label `fig:ex9b 201' multiply defined. - - -LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined. - - -LaTeX Warning: Label `fig:ex9b 201' multiply defined. - - -LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined. - -) - LaTeX Warning: Citation `LBB' on page 117 undefined on input line 206. -[117] +[117]/build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:46: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy stem.tex [118 ] -[Loading MPS to PDF converter (version 2006.09.02).] -) [119] [120] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) [121] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty)) [122] +c/user/figures//FaultSystem2D.pdfg++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getSize.cpp +>] [119] [120] [121])) [122] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +tex/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + Chapter 7. LaTeX Warning: Citation `Zienc' on page 123 undefined on input line 74. @@ -11025,93 +11398,55 @@ LaTeX Warning: Citation `NumHand' on page 123 undefined on input line 74. [123] -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty Underfull \vbox (badness 1226) has occurred while \output is active [124 ]) [125 ] [126]) +eyMesh.pdf>] [125 ] [126] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex) [127 -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)] [128] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex [2]) [3] +lements.tex) [127] [128] Underfull \hbox (badness 1910) in paragraph at lines 383--383 []\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in -Underfull \vbox (badness 1337) has occurred while \output is active [129 [4] ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur -rentdev.tex [5]) [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.toc LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 444. LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 456. -[130]) [131In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_System_3D.cpp:41: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -] [7] +[130]) [131] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex [132]) [8] -Chapter 1. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex +tex [132] Chapter 8. -[133/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -] [9] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui -ckstart.tex) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex [134 ] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)) [135] +[133] [134 ]) [135] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [136])) [10] -Chapter 2. +y.tex [136] +Chapter 9. +[137]) [138 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t +ex +Chapter 10. +[139] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple01.tex -Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w -arning (ext4): destination with the same identifier (name{figure.2.1}) has been - already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.47 \end{equation} - ]paso::MUMPS_Handler< cplx_t >... +LaTeX Warning: Citation `GOCAD' on page 140 undefined on input line 136. + +[140] + +LaTeX Warning: Citation `VisIt' on page 141 undefined on input line 174. + +[141]) [142] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.texpaso::MUMPS_Handler< cplx_t >... Generating docs for compound paso::Options... Generating docs for compound paso::PasoException... Generating docs for compound paso::Pattern... @@ -11192,78 +11527,12 @@ Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... -Generating m [12 -Chapter 9. -[137])] [138 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex -Underfull \hbox (badness 4353) in paragraph at lines 185--185 -[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able -at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound -ary _ -[13] -Chapter 10. -[139]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_CopyElementData.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - - -LaTeX Warning: Citation `GOCAD' on page 140 undefined on input line 136. - -[140] - -LaTeX Warning: Citation `VisIt' on page 141 undefined on input line 174. - -[141] [14/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -pdfTeX warning (ext4): destination with the same identifier (name{figur -e.2.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [15pdfTeX warning (ext4): destination with the same identi -fier (name{figure.2.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [16] [144] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) +[143] [144] LaTeX Warning: Citation `Briggs2000' on page 145 undefined on input line 164. @@ -11285,7 +11554,7 @@ LaTeX Warning: Citation `TrilinosWeb' on page 146 undefined on input line 205. -[146]ember index... +[146] [147]ember index... Generating file index... Generating file member index... Generating example index... @@ -11294,29 +11563,6 @@ Running plantuml with JAVA... lookup cache used 19453/65536 hits=310549 misses=20580 finished... - [147]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_interpolate.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ Underfull \hbox (badness 10000) in paragraph at lines 266--271 @@ -11324,14 +11570,8 @@ Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279 []\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s moothed ag-gre-ga-tion, Cheby-shev smoother and -[148 -Underfull \hbox (badness 10000) in paragraph at lines 415--425 - -[17]]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [149] [150]g++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_NodeCoordinates.cpp - [18] +[148]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_2D.cpp + [149] [150] Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] @@ -11346,132 +11586,52 @@ [151]) [152] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli c.tex -Underfull \hbox (badness 10000) in paragraph at lines 604--605 - - -Underfull \hbox (badness 10000) in paragraph at lines 604--605 - -[19]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getAssembleParameters.cpp:24: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - Chapter 12. LaTeX Warning: Citation `Sympy' on page 153 undefined on input line 20. -Underfull \vbox (badness 10000) has occurred while \output is active [153]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [20pdfTeX warning (ext4): destination with the same identifier (name{figur -e.2.4}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.680 \clearpage - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ ->] +Underfull \vbox (badness 10000) has occurred while \output is active [153] +[154]g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp + LaTeX Warning: `!h' float specifier changed to `!ht'. -[155]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [156 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> ]> ...shipout:D \box_use:N \l_shipout_box -l.776 \clearpage +l.134 \clearpage ]> ] [157]) [158] +//diffaniso.png +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + +[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.6}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.199 \clearpage + ] [157]) [158] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.tex +ds.tex> ] [168] [169] [170] [171]) +[165] [166] [167]> ] [175]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex [176] Appendix E. -)) [177] [178 -Underfull \hbox (badness 10000) in paragraph at lines 17--19 - -[23] +)) [177] [178] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in -d] [179] [180] [181]) [182] +d [179] [180] +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ +]. To show sub-domains, we need to go back to [] +[46]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_2D.cpp + [181 [47])pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.7}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.291 \clearpage + [24pdfTeX warning (ext4): destination with the same identifier (name{figur -e.2.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.109 \end{python} - ]< @@ -11595,20 +11755,10 @@ tmbi8a.pfb> -Output written on user.pdf (184 pages, 2640237 bytes). +Output written on user.pdf (184 pages, 2640370 bytes). Transcript written on user.log. cd debian/tmp3/posix/doc/user && makeindex user.idx - - -LaTeX Warning: Float too large for page by 10.55325pt on input line 146. - -) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2 -.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.108 \chapter - {Heat Diffusion in Two Dimensions} ] -[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 +Underfull \hbox (badness 10000) in paragraph at lines 294--299 + +[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.108 \chapter - {Heat Diffusion in Two Dimensions} patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te -x> +x (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc -.cls ] -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty -Chapter 3. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -Underfull \hbox (badness 10000) in paragraph at lines 22--23 - - -Underfull \hbox (badness 10000) in paragraph at lines 22--23 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty>]) +Chapter 5. -[27] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty [28pdfTeX warning (ext4): destination with the same identifier (name{figur -e.3.1}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.141 \begin{python} - ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)) [49)] (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +Underfull \hbox (badness 10000) in paragraph at lines 154--155 -LaTeX Warning: Float too large for page by 12.55325pt on input line 232. -[29] +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + +[50 +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty] (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty -Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) [51] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)g++ -o debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_AverageElementData.cpp + +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +Underfull \hbox (badness 10000) in paragraph at lines 279--280 -Underfull \hbox (badness 10000) in paragraph at lines 306--311 +Underfull \hbox (badness 10000) in paragraph at lines 279--280 -[30)] -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty) [31] [32 -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.stypdfTeX warning (ext4): destination with the same identifier (name -{figure.3.2}) has been already used, duplicate ignored +[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 +}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.112 \chapter - {Complex Geometries} ) ] +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DudleyDomain.cpp + +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) [53 +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty])) [54pdfTeX warning (ext4): destination with t +he same identifier (name{figure.5.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.122 \chapter + {Seismic Wave Propagation} ] +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty +Chapter 6. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple08.tex) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def> ] -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty) [33pdfTeX warning (ext4): destination -with the same identifier (name{figure.3.3}) has been already used, duplicate ig -nored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries}pdfTeX warning (ext4): destination with the s -ame identifier (name{figure.3.4}) has been already used, duplicate ignored +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) +Underfull \hbox (badness 10000) in paragraph at lines 139--145 + +[56pdfTeX warning (ext4): destination with the same identifier (name{table.6.1} +) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.112 \chapter - {Complex Geometries} ] -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty [34]) -Chapter 4. +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.styg++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile.cpp -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty -Underfull \hbox (badness 10000) in paragraph at lines 37--41 - -[35)]) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de fs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [36pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.1}) has been already used, duplicate ignored +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [57] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) +[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1 +}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.139 \begin{python} - ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) +l.214 \clearpage + < +/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu +res/ex08pw650.png (PNG copy)> ]) (/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) \@input{elist.aux} (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex [37] [38 (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.stypdfTeX warning (ext4): destina -tion with the same identifier (name{figure.4.2}) has been already used, duplica -te ignored - 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-[39 -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd]) [40pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.276 \clearpage - ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex [7]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE.cpp - [8] [9 -Underfull \hbox (badness 10000) in paragraph at lines 18--25 - -[41])pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.74 l30= - Line(p3, p0) ] [12g++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getNormal.cpp -] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [13 ] [14]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Points.cpp - [15] [16 ] [17 ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.texg++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getSize.cpp - [18 ] [19] [20] [21] [22]g++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/dudleycpp.cpp -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x [23 ] [24 ] [25 ] [26] [27] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_LumpedSystem.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex [29 ]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [30] [31]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex [32 ] [33]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x [34] [35 ] -[36 ] [37Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h" -]Install file: "escriptcore/src/Random.h" as "debian/stage3/include/escript/Random.h" -Install file: "escriptcore/src/SolverOptions.h" as "debian/stage3/include/escript/SolverOptions.h" -Install file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h" -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex [38 ]g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile.cpp -)) [39 ] -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] -[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.134 \clearpage - ] -Underfull \hbox (badness 10000) in paragraph at lines 137--142 - -[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.199 \clearpage - ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex [40] -Chapter 2. -[41] [42]>) [43 ] [47]> ]> ] [54] -Underfull \vbox (badness 1348) has occurred while \output is active [55] -[56] [57] -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - - -Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 -[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ -]. To show sub-domains, we need to go back to [] -[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.291 \clearpage - ] -Underfull \hbox (badness 10000) in paragraph at lines 294--299 - -[48 [68pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.305 \clearpage - ]) -Chapter 5. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.texg++ -o debian/tmp3/posix/dudley/src/ElementFile_createColoring.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_createColoring.cpp - [49] [80] -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - -[50 [81]] [82] [83] [84] [51 [85]] [86] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping -.tex [87] -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - -[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.280 - ] [53]) [54pdfTeX warning (ext4): destination with t -he same identifier (name{figure.5.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.122 \chapter - {Seismic Wave Propagation} ] -Chapter 6. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex -Underfull \hbox (badness 10000) in paragraph at lines 18--24 - -[55]>] [89 ...shipout:D \box_use:N \l_shipout_box - -l.156 # - set initial values for first two time steps with source terms] [57] -[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.214 \clearpage - < -/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu -res/ex08pw650.png (PNG copy)> ]> ...shipout:D \box_use:N \l_shipout_box - -l.273 t= - t+h; n=n+1 ]>] - -Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin -e 293. - -[60] [61pdfTeX warning (ext4): destination with the same identifier (name{figur +ep.texpdfTeX warning (ext4): destination with the same identifier (name{figur e.6.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.392 \clearpage ] [62pdfTeX warning (ext4): destination with +/doc/cookbook/figures/ex08babc.png [11 ] [12] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)>] [62pdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) has been already used, duplicate ignore d ...shipout:D \box_use:N \l_shipout_box @@ -12124,8 +12015,9 @@ n-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG copy)> ]> ] [13 ] Underfull \hbox (badness 10000) in paragraph at lines 395--399 ) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6 @@ -12148,9 +12040,7 @@ mple09.tex Underfull \hbox (badness 10000) in paragraph at lines 17--21 -[65] [66]>])) -[91 ]> ] [16 ] Underfull \hbox (badness 10000) in paragraph at lines 202--209 @@ -12173,21 +12063,50 @@ ookbook/figures/ex09b00201.png (PNG copy)> ] [72] +/ex09b00440.png (PNG copy)>] [72] [17 ] Chapter 8. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex +mple10.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.tex Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li ne 27. -[73] [74]>] [92 ] [19]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_Points.cpp:38: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + Underfull \hbox (badness 10000) in paragraph at lines 93--97 -[75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur +[75/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +] [76pdfTeX warning (ext4): destination with the same identifier (name{figur e.8.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12198,13 +12117,18 @@ l.177 \clearpage ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex> ]>] [77pdfTeX w +/doc/cookbook/figures/mayavi2_openfile.png [20] [21] [22]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x> ] [24 ] [25 ] [26]>] [77pdfTeX w arning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12216,19 +12140,21 @@ l.177 \clearpage ] [97 ] [98 ] [99] [100] [101] [102] [103] [104]) [105] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [106] -Chapter 6. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess -olver.tex [107] [108]> ] [109] [110]g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_jacobians.cpp - [111] +/doc/cookbook/figures/mayavi2_cell2point.png [27] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex [29 ] [30]> ] [31]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex [32 ] Underfull \hbox (badness 10000) in paragraph at lines 180--184 [78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -12250,39 +12176,12 @@ l.246 \clearpage ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl -ux.tex [112] [113] +/doc/cookbook/figures/ex10p_boundeff.pdf>] [33] Underfull \hbox (badness 10000) in paragraph at lines 275--281 -[81]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_NodeCoordinates.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [114 ])/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [115] [116] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{ +[81]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +x [34 [82]] [83pdfTeX warning (ext4): destination with the same identifier (name{ figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12295,7 +12194,14 @@ ] - [117][84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 + [35 ][84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 0}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12309,12 +12215,12 @@ l.449 \clearpage ]) [86] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex [118 +mple11.tex +[36 ] Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 24. @@ -12335,20 +12241,19 @@ ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.bbl ] [87] [88pdfTeX warning (ext4): destination with the same identifier ( +kbook.bbl [87] [88pdfTeX warning (ext4): destination with the same identifier ( name{figure.9.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1 \begin{thebibliography}{5} ]) [119 +ian/tmp3/posix/doc/cookbook/figures/ex11cstreamline.png (PNG copy)>]) Package natbib Warning: There were undefined citations. [89] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux] +kbook.aux Package natbib Warning: Citation(s) may have changed. (natbib) Rerun to get citations correct. @@ -12476,44 +12381,37 @@ dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb>< [120/usr/share/texlive/texmf-dist/fonts/type1/public/ams +lic/amsfonts/cm/cmmi7.pfb> [37] [121] -Output written on cookbook.pdf (89 pages, 4391834 bytes). +Output written on cookbook.pdf (89 pages, 4391908 bytes). Transcript written on cookbook.log. -)) [122]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex -Chapter 7. -[123]This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + [38 ] [125 ] [126] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex)entering extended mode +entering extended mode LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> [127] +L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.tex [128] +kbook.tex (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy sdoc.cls Document Class: esysdoc @@ -12521,97 +12419,58 @@ Document Class: book 2020/04/10 v1.4m Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/IndexList.cpp - +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) -Underfull \hbox (badness 1910) in paragraph at lines 383--383 -[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 -PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in - -Underfull \vbox (badness 1337) has occurred while \output is active [129 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) ] -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty [130 -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty]) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) [131)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex [132 -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)] +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)g++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_distributeByRankOfDOF.cpp - -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty -Chapter 8. -[133)] +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def [134)) ] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty) [135] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [136] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_getPattern.cpp - +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -Chapter 9. -[137]) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty [138 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -Chapter 10. -[139] -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) [140] -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) [141 -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)] +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)) [142] +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.tex (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -Chapter 11. -[143]) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty>]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) [144] -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty [145] -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) [146] +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))) [39 (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux -Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] - 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-Underfull \vbox (badness 10000) has occurred while \output is active [153] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +Chapter 2. +[41 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty] (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) -[154] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [42 (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] +nts/map/pdftex/updmap/pdftex.map}]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc guide.tex [2]) [3] [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur rentdev.tex [5]) [6] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.toc [7]) [8] +kbook.toc) [7] [43)] [8] [44 Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex [9] +ro.tex] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex [9] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui ckstart.tex) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) - -LaTeX Warning: `!h' float specifier changed to `!ht'. - -[155])) [10] +Chapter 3. +[45])) [10] Chapter 2. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple01.tex [156 ] [12] +six/doc/cookbook/figures/onedheatdiff001.pdf >]] [12] Underfull \hbox (badness 4353) in paragraph at lines 185--185 [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound ary _ -[13] [14pdfTeX warning (ext4): destination with the same identifier (name{figur +[13] [47] [14pdfTeX warning (ext4): destination with the same identifier (name{figur e.2.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.313 T here are various ways to construct domain objects. The simplest form ... ] [15pdfTeX warning (ext4): destination with the same identi +gures/workflow.png>] [15pdfTeX warning (ext4): destination with the same identi fier (name{figure.2.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12758,30 +12606,27 @@ here are various ways to construct domain objects. The simplest form ... ] [16] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty> ] Underfull \hbox (badness 10000) in paragraph at lines 415--425 -[17]> -] +[17] [50] [51] +[52] [53] [18] [54] Underfull \hbox (badness 10000) in paragraph at lines 604--605 Underfull \hbox (badness 10000) in paragraph at lines 604--605 -[19] [157]) [20 [158]pdfTeX warning (ext4): destination with the same identifier (name{figur +[19]g++ -o debian/tmp3/posix/dudley/src/ElementFile_createColoring.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_createColoring.cpp + +Underfull \vbox (badness 1348) has occurred while \output is active [55] [20pdfTeX warning (ext4): destination with the same identifier (name{figur e.2.4}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.680 \clearpage ] [160] +[56] [57]>] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 684--692 @@ -12793,46 +12638,62 @@ l.776 \clearpage -Appendix B. -[165 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet -edevs.tex] [172] -Appendix C. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs -.tex [173] [174] -Appendix D. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +spyplot200.png [64] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65] +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[66]>] +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[67] Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] [][][][][][][][][][][][][][][][][][][][][][][][][] ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex +mple02.tex [68] Underfull \hbox (badness 10000) in paragraph at lines 17--19 -[23)] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [24pdfTeX warning (ext4): destination with the same identifier (name{figur +[23] [69] [70] [71] [24pdfTeX warning (ext4): destination with the same identifier (name{figur e.2.6}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.109 \end{python} ] +ix/doc/cookbook/figures/onedheatdiff002.pdf>] [72] LaTeX Warning: Float too large for page by 10.55325pt on input line 146. @@ -12842,161 +12703,58 @@ l.108 \chapter {Heat Diffusion in Two Dimensions} ] -[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 +on-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png [73]) [74] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.tex +Chapter 4. +[75]>] +[26 [76]pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.108 \chapter {Heat Diffusion in Two Dimensions} + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -] -Appendix E. -)) [177] [178] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in -d/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> ] +dpyplot050.png [80] [81] [82]> ]] Chapter 3. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex [183]) [184] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au -x -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.aux) +mple03.tex Underfull \hbox (badness 10000) in paragraph at lines 22--23 Underfull \hbox (badness 10000) in paragraph at lines 22--23 -[27] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.aux) [28pdfTeX warning (ext4): destination with the same identifier (name{figur +[27] [28 [88pdfTeX warning (ext4): destination with the same identifier (name{figur e.3.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.141 \begin{python} ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.aux)) - -Package rerunfilecheck Warning: File `user.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc} < -/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>) +[29] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)g++ -o debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_distributeByRankOfDOF.cpp +>] Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] Underfull \hbox (badness 10000) in paragraph at lines 306--311 -[30] -Output written on user.pdf (184 pages, 2642657 bytes). -Transcript written on user.log. -) [31]Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf" - [32pdfTeX warning (ext4): destination with the same identifier (name -{figure.3.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries} + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -> instead.' +) [31] [32pdfTeX warning (ext4): destination with the same identifier (name +{figure.3.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp -> ] [33pdfTeX warning (ext4): destination +g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_jacobians.cpp +> ]>] [33pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) has been already used, duplicate ig nored ...shipout:D \box_use:N \l_shipout_box @@ -13037,22 +12804,50 @@ l.112 \chapter {Complex Geometries} ] [34] Chapter 4. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex +mple04.tex> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + Underfull \hbox (badness 10000) in paragraph at lines 37--41 -[35] [36pdfTeX warning (ext4): destination with the same identifier (name{figur +[35]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [36pdfTeX warning (ext4): destination with the same identifier (name{figur e.4.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.139 \begin{python} ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +osix/doc/cookbook/figures/pycadrec.pdf>In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -13071,10 +12866,13 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getNormal.cpp:18: + from dudley/src/Assemble_interpolate.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ [37] [38pdfTeX warning (ext4): destina tion with the same identifier (name{figure.4.2}) has been already used, duplica te ignored @@ -13082,19 +12880,9 @@ l.194 \clearpage instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ ->] -Underfull \hbox (badness 10000) in paragraph at lines 197--202 - -[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.276 \clearpage - ])) +[91 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ ->]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +> ] [92 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex +Chapter 5. +[93] [94] [95 ] [96 ]>] [97 ] [98 ] +Underfull \hbox (badness 10000) in paragraph at lines 197--202 + +[39] [99 [40pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.276 \clearpage + ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex [104]) [105] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +tex [106] +Chapter 6. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess +olver.tex [107 Underfull \hbox (badness 10000) in paragraph at lines 18--25 -[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 +[41]pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.74 l30= Line(p3, p0) ]) [115] [116] [117] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy +stem.tex [118 ] [119] [120] [121])) [122]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from debian/stage3/include/dudley/DudleyDomain.h:51, + from dudley/src/DudleyDomain.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -13150,15 +12996,32 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_Points.cpp:38: + from dudley/src/Assemble_AverageElementData.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + +Chapter 7. +[123/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFLabeling.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + +Underfull \vbox (badness 1226) has occurred while \output is active [124 ] [125 ] [126] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye +lements.tex) [127] [128] +Underfull \hbox (badness 1910) in paragraph at lines 383--383 +[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 +PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in + +Underfull \vbox (badness 1337) has occurred while \output is active [129 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +> ] [130])/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + [131] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +tex [132] +Chapter 8. +[133] [134 ]) [135] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.tex [136] +Chapter 9. +[137]) [138 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t +ex +Chapter 10. +[139] [140] [141]) [142] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.tex +Chapter 11. +[143] [144] [145] [146] [147] +Underfull \hbox (badness 10000) in paragraph at lines 266--271 + + +Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279 +[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s +moothed ag-gre-ga-tion, Cheby-shev smoother and +[148] [149] [150] +Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] + +Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][] + +Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[151]) [152] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.tex +Chapter 12. + +Underfull \vbox (badness 10000) has occurred while \output is active [153] +[154] + +LaTeX Warning: `!h' float specifier changed to `!ht'. + +[155] [156 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ ->]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +> instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +> +] [157]) [158] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.tex +Chapter 13. +[159] [160] [161]) [162] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/notatio +n.tex +Appendix A. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/changes +.tex [163] [164] +Appendix B. +[165] [166] [167] [168] [169] [170] [171]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet +edevs.tex [172] +Appendix C. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs +.tex [173] [174] +Appendix D. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [175]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex +[176] +Appendix E. +)) [177] [178] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in +d [179] [180g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/IndexList.cpp +] [181]) [182] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.bb +l [183]) [184] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au +x +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a +ux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a +ux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.aux)) + +Package rerunfilecheck Warning: File `user.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + ) +(see the transcript file for additional information){/usr/share/texlive/texmf-d +ist/fonts/enc/dvips/base/8r.enc}< +/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> +Output written on user.pdf (184 pages, 2642795 bytes). +Transcript written on user.log. +Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf" +g++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_distributeByRankOfDOF.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_getPattern.cpp +>] Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 \OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th @@ -13230,37 +13263,11 @@ l.199 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +/doc/cookbook/figures/heatrefractiontdp.pngg++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp > ] Underfull \hbox (badness 10000) in paragraph at lines 202--209 @@ -13274,7 +13281,9 @@ l.291 \clearpage ] +/doc/cookbook/figures/heatrefractionflux.pngg++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFLabeling.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_read.cpp +>] Underfull \hbox (badness 10000) in paragraph at lines 294--299 [48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 @@ -13293,7 +13302,19 @@ Underfull \hbox (badness 10000) in paragraph at lines 154--155 -[50]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +[50] [51] +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + +[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.280 + ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -13312,26 +13333,11 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_distributeByRankOfDOF.cpp:18: + from dudley/src/ElementFile_createColoring.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - [51]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - -[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.280 - ] [53]) [54pdfTeX warning (ext4): destination with t + [53]) [54pdfTeX warning (ext4): destination with t he same identifier (name{figure.5.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13340,7 +13346,10 @@ pt-5.6/debian/tmp3/posix/doc/cookbook/figures/ex07usamp.png (PNG copy)> ] +3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa @@ -13375,7 +13384,8 @@ l.273 t= t+h; n=n+1 ] [60] [61pdfTeX warning (ext4): destination +ix/doc/cookbook/figures/source.pngg++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_readGmsh.cpp +>] [60] [61pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3}) has been already used, duplicate i gnored ...shipout:D \box_use:N \l_shipout_box @@ -13413,42 +13423,14 @@ Chapter 7. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple09.texg++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_readGmsh.cpp - +mple09.tex Underfull \hbox (badness 10000) in paragraph at lines 17--21 -[65] [66]g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_resolveNodeIds.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/IndexList.h:27, - from dudley/src/IndexList.cpp:24: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [67] [68 ]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [69pdfTeX warning ( +x/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>] [69pdfTeX warning ( ext4): destination with the same identifier (name{figure.7.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13470,30 +13452,7 @@ Chapter 8. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex [73] [74]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_jacobians.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +mple10.tex [73] [74] Underfull \hbox (badness 10000) in paragraph at lines 93--97 [75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -13507,10 +13466,7 @@ l.177 \clearpage instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> ] [77pdfTeX w arning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored @@ -13523,7 +13479,8 @@ l.177 \clearpage ] Underfull \hbox (badness 10000) in paragraph at lines 180--184 @@ -13549,53 +13506,7 @@ /doc/cookbook/figures/ex10p_boundeff.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 275--281 -[81]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_distributeByRankOfDOF.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [82] [83In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_getPattern.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -pdfTeX warning (ext4): destination with the same identifier (name{ +[81] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{ figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13608,9 +13519,6 @@ ] -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ [84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 0}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13628,10 +13536,7 @@ Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - +mple11.tex Underfull \hbox (badness 10000) in paragraph at lines 61--62 @@ -13788,12 +13693,64 @@ /fonts/type1/urw/times/utmb8a.pfb> -Output written on cookbook.pdf (89 pages, 4392334 bytes). +Output written on cookbook.pdf (89 pages, 4392404 bytes). Transcript written on cookbook.log. -g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tet4.cpp Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf" +g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tet4.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tri3.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_write.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/ElementFile.h:21, + from dudley/src/ElementFile_distributeByRankOfDOF.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/ElementFile.h:21, + from dudley/src/ElementFile_jacobians.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile.cpp g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createDenseLabelings.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, @@ -13813,9 +13770,9 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: + from dudley/src/Dudley.h:31, + from dudley/src/IndexList.h:27, + from dudley/src/IndexList.cpp:24: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -13841,7 +13798,7 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_optimizeDOFLabeling.cpp:18: + from dudley/src/Mesh_distributeByRankOfDOF.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -13849,9 +13806,6 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createMappings.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp -g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13878,9 +13832,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Util.cpp -g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp -g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13900,7 +13851,7 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_resolveNodeIds.cpp:18: + from dudley/src/Mesh_getPattern.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -13926,7 +13877,7 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_readGmsh.cpp:18: + from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -13952,13 +13903,15 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tri3.cpp:18: + from dudley/src/Mesh_optimizeDOFLabeling.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp +g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13976,9 +13929,9 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_createDenseLabelings.cpp:18: + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_readGmsh.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14002,12 +13955,13 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile.cpp:18: + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_tet4.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -14030,13 +13984,14 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tet4.cpp:18: + from dudley/src/Mesh_write.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Util.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14056,13 +14011,68 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_write.cpp:18: + from dudley/src/Mesh_resolveNodeIds.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_tri3.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp +g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_jacobians.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/NodeFile.h:21, + from dudley/src/NodeFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/BiCGStab.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14089,6 +14099,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14108,14 +14119,19 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_gather.cpp:18: + from dudley/src/NodeFile_createDenseLabelings.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/BiCGStab.cpp +g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp +g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp +g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Functions.cpp +g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp +g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES2.cpp +g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MKL.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14142,9 +14158,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp -g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp -g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp +g++ -o debian/tmp3/posix/paso/src/MUMPS.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MUMPS.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14163,12 +14177,11 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_jacobians.cpp:18: + from dudley/src/NodeFile.h:21, + from dudley/src/NodeFile_gather.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Functions.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -14198,6 +14211,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/NewtonGMRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14224,17 +14238,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp -g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES2.cpp -g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MKL.cpp -g++ -o debian/tmp3/posix/paso/src/MUMPS.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MUMPS.cpp -g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/NewtonGMRES.cpp g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Options.cpp -g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp -g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp -g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp -g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_mis.cpp -g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14244,15 +14248,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/FluxLimiter.h:21, - from paso/src/FluxLimiter.cpp:28: + from paso/src/Solver.h:22, + from paso/src/BiCGStab.cpp:22: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp +g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14260,22 +14265,25 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/BiCGStab.cpp:22: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Preconditioner.cpp -g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ReactiveSolver.cpp -g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SchurComplement.cpp -g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp -g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver.cpp -g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver_Function.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14294,6 +14302,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14303,14 +14312,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Functions.h:22, - from paso/src/Functions.cpp:17: + from paso/src/Transport.h:24, + from paso/src/FluxLimiter.h:21, + from paso/src/FluxLimiter.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_mis.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14320,16 +14331,18 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/GMRES2.cpp:17: + from paso/src/Functions.h:22, + from paso/src/Functions.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_getSubmatrix.cpp +g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp +g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Preconditioner.cpp +g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ReactiveSolver.cpp +g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SchurComplement.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14347,7 +14360,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp +g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp +g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14357,13 +14371,19 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/NewtonGMRES.cpp:34: + from paso/src/Solver.h:22, + from paso/src/GMRES2.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver_Function.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_getSubmatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_saveHB.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14381,9 +14401,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_saveHB.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14393,17 +14410,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/Solver.cpp:28: + from paso/src/NewtonGMRES.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixVector.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_MatrixVector.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14421,6 +14438,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_MatrixVector.cpp +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14430,9 +14449,7 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/ReactiveSolver.h:22, - from paso/src/ReactiveSolver.cpp:34: + from paso/src/SchurComplement.cpp:21: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14448,15 +14465,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Preconditioner.h:21, - from paso/src/Smoother.cpp:28: + from paso/src/Functions.h:22, + from paso/src/Solver_Function.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14466,8 +14482,9 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Functions.h:22, - from paso/src/Solver_Function.cpp:17: + from paso/src/Transport.h:24, + from paso/src/ReactiveSolver.h:22, + from paso/src/ReactiveSolver.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14483,9 +14500,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SparseMatrix.cpp:28: + from paso/src/Solver.h:22, + from paso/src/Solver.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14501,7 +14517,26 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/SchurComplement.cpp:21: + from paso/src/Preconditioner.h:21, + from paso/src/Smoother.cpp:28: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from paso/src/Paso.h:36, + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SparseMatrix.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14516,12 +14551,6 @@ g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrixPattern_unrollBlocks.cpp g++ -o debian/tmp3/posix/paso/src/Transport.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport.cpp g++ -o debian/tmp3/posix/paso/src/Transport_solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport_solve.cpp -g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ILU.cpp -g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp -g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/RILU.cpp -g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/TFQMR.cpp -g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp -g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14541,6 +14570,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ILU.cpp +g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14553,15 +14584,15 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix.cpp:28: + from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp -g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp +g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/RILU.cpp +g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/TFQMR.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14574,13 +14605,14 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_debug.cpp:28: + from paso/src/SystemMatrix.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14593,10 +14625,11 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: + from paso/src/SystemMatrix_extendedRows.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -14612,14 +14645,14 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_loadMM.cpp:29: + from paso/src/SystemMatrix_debug.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp +g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14629,17 +14662,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_extendedRows.cpp:34: + from paso/src/Transport.h:24, + from paso/src/Transport.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp +g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14657,6 +14689,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractReducer.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -14667,8 +14700,10 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/Transport.cpp:28: + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SystemMatrix.h:33, + from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14676,6 +14711,7 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractSystemMatrix.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14685,14 +14721,13 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/MINRES.cpp:20: + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SystemMatrix.h:33, + from paso/src/SystemMatrix_loadMM.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14702,17 +14737,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: + from paso/src/ILU.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ArrayOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14722,7 +14757,7 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/ILU.cpp:29: + from paso/src/RILU.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14739,13 +14774,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, from paso/src/Solver.h:22, - from paso/src/TFQMR.cpp:52: + from paso/src/MINRES.cpp:20: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14755,18 +14791,13 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/RILU.cpp:28: + from paso/src/solve.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ArrayOps.cpp -g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Data.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14776,15 +14807,20 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/solve.cpp:29: + from paso/src/Solver.h:22, + from paso/src/TFQMR.cpp:52: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Data.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataEmpty.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataExpanded.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14801,7 +14837,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataLazy.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -14810,18 +14845,24 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/AbstractContinuousDomain.h:23, - from escriptcore/src/AbstractContinuousDomain.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from escriptcore/src/AbstractReducer.h:21, + from escriptcore/src/AbstractReducer.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTagged.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14831,16 +14872,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/AbstractSystemMatrix.h:22, - from escriptcore/src/AbstractSystemMatrix.cpp:18: + from escriptcore/src/AbstractContinuousDomain.h:23, + from escriptcore/src/AbstractContinuousDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTypes.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14848,25 +14888,19 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/AbstractReducer.cpp:17: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/FunctionSpace.h:24, + from escriptcore/src/AbstractTransportProblem.h:22, + from escriptcore/src/AbstractTransportProblem.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTagged.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTypes.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14877,8 +14911,8 @@ from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/AbstractTransportProblem.h:22, - from escriptcore/src/AbstractTransportProblem.cpp:18: + from escriptcore/src/AbstractSystemMatrix.h:22, + from escriptcore/src/AbstractSystemMatrix.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14901,10 +14935,7 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataConstant.h:23, - from escriptcore/src/BinaryDataReadyOps.h:23, - from escriptcore/src/BinaryDataReadyOps.cpp:21: + from escriptcore/src/DataAbstract.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14935,9 +14966,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorAlt.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14954,7 +14983,10 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataAbstract.cpp:18: + from escriptcore/src/DataReady.h:23, + from escriptcore/src/DataConstant.h:23, + from escriptcore/src/BinaryDataReadyOps.h:23, + from escriptcore/src/BinaryDataReadyOps.cpp:21: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14978,15 +15010,15 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataEmpty.h:22, - from escriptcore/src/DataEmpty.cpp:18: + from escriptcore/src/DataConstant.h:23, + from escriptcore/src/DataConstant.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EscriptParams.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorAlt.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14994,16 +15026,27 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/DataFactory.h:24, - from escriptcore/src/DataFactory.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from escriptcore/src/WrappedArray.h:25, + from escriptcore/src/DataVectorAlt.h:26, + from escriptcore/src/DataVector.h:24, + from escriptcore/src/DataAbstract.h:23, + from escriptcore/src/DataReady.h:23, + from escriptcore/src/DataEmpty.h:22, + from escriptcore/src/DataEmpty.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp +g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EscriptParams.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15021,11 +15064,13 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataConstant.h:23, - from escriptcore/src/DataConstant.cpp:18: + from escriptcore/src/DataReady.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15033,28 +15078,17 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from escriptcore/src/WrappedArray.h:25, - from escriptcore/src/DataVectorAlt.h:26, - from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/DataExpanded.cpp:18: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/DataFactory.h:24, + from escriptcore/src/DataFactory.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ES_optype.cpp +g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15071,11 +15105,12 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataReady.cpp:18: + from escriptcore/src/DataLazy.h:22, + from escriptcore/src/DataLazy.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ES_optype.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -15096,13 +15131,16 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/Data.h:24, - from escriptcore/src/DataTagged.cpp:18: + from escriptcore/src/DataExpanded.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp +g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpace.cpp +g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpaceFactory.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15119,17 +15157,14 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataLazy.h:22, - from escriptcore/src/DataLazy.cpp:18: + from escriptcore/src/Data.h:24, + from escriptcore/src/DataTagged.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp -g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpace.cpp -g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpaceFactory.cpp g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/LapackInverseHelper.cpp g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIDataReducer.cpp g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIScalarReducer.cpp @@ -15156,8 +15191,6 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NCHelper.cpp -g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NonReducedVariable.cpp -g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NullDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15180,6 +15213,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NonReducedVariable.cpp +g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NullDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/pyerr.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15204,7 +15240,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/pyerr.cpp g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Random.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -15213,19 +15248,10 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/MPIScalarReducer.h:20, - from escriptcore/src/MPIScalarReducer.cpp:17: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/FunctionSpace.h:24, + from escriptcore/src/FunctionSpace.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15233,6 +15259,7 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SolverOptions.cpp +g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15242,16 +15269,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpaceFactory.h:22, - from escriptcore/src/FunctionSpaceFactory.cpp:18: + from escriptcore/src/NullDomain.h:22, + from escriptcore/src/NullDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp -g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15287,29 +15312,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/FunctionSpace.cpp:18: + from escriptcore/src/FunctionSpaceFactory.h:22, + from escriptcore/src/FunctionSpaceFactory.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Taipan.cpp -g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/TestDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp -g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp -/usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc -Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" -/usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc -Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc -Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc -Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc -Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15317,16 +15327,26 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/NullDomain.h:22, - from escriptcore/src/NullDomain.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from escriptcore/src/AbstractReducer.h:21, + from escriptcore/src/MPIScalarReducer.h:20, + from escriptcore/src/MPIScalarReducer.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15350,75 +15370,73 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc +g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Taipan.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" +g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/TestDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp +g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp +/usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc +Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" +/usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc +Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc +Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc +Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc +Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc +Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc -Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" +Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc -Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" +Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc -Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" +Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc +Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/util.py debian/tmp3/posix/escript/util.pyc Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/benchmark.py debian/tmp3/posix/escriptcore/py/benchmark.pyc -Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/datamanager.py debian/tmp3/posix/escriptcore/py/datamanager.pyc -Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/escriptcpp.cpp Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc -Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc -Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc +Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc +Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/object.hpp:9, - from /usr/include/boost/python/dict.hpp:10, - from escriptcore/src/SolverOptions.h:21, - from escriptcore/src/SolverOptions.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc -Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc -Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc +Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/nonlinearPDE.py debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc +Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc -Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc -Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc +Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc +Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc +Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15443,52 +15461,69 @@ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc -Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc -Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc -Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/functions.py debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc -Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/util.py debian/tmp3/posix/escriptcore/py/util.pyc -Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" /usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc +Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" /usr/bin/python3 scripts/py_comp.py finley/py_src/factorywrappers.py debian/tmp3/posix/finley/py/factorywrappers.pyc -Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/object.hpp:9, + from /usr/include/boost/python/dict.hpp:10, + from escriptcore/src/SolverOptions.h:21, + from escriptcore/src/SolverOptions.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h" -Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" +Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" Install file: "finley/src/Finley.h" as "debian/stage3/include/finley/Finley.h" Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h" +Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" Install file: "finley/src/FinleyException.h" as "debian/stage3/include/finley/FinleyException.h" -Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" -Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h" Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h" -g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_AverageElementData.cpp +Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" +Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h" Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h" +g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_AverageElementData.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyElementData.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyNodalData.cpp Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h" @@ -15496,8 +15531,6 @@ Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h" Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h" g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/finleycpp.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15519,6 +15552,9 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15536,34 +15572,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from escriptcore/src/WrappedArray.h:25, - from escriptcore/src/DataVectorAlt.h:26, - from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/WrappedArray.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Points.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15582,7 +15591,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_1D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15590,16 +15599,24 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/AbstractContinuousDomain.h:23, - from escriptcore/src/escriptcpp.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from escriptcore/src/WrappedArray.h:25, + from escriptcore/src/DataVectorAlt.h:26, + from escriptcore/src/DataVector.h:24, + from escriptcore/src/DataAbstract.h:23, + from escriptcore/src/Data.h:24, + from escriptcore/src/WrappedArray.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Points.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15614,7 +15631,6 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -15635,7 +15651,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_3D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15643,17 +15659,13 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Points.cpp:36: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/AbstractContinuousDomain.h:23, + from escriptcore/src/escriptcpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15664,13 +15676,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_LumpedSystem.cpp:28: + from finley/src/Assemble_AverageElementData.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15681,13 +15697,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_NodeCoordinates.cpp:25: + from finley/src/Assemble_PDE.cpp:48: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_3D.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15698,13 +15716,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_AverageElementData.cpp:25: + from finley/src/Assemble_NodeCoordinates.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15731,18 +15750,18 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE.cpp:48: + from finley/src/Assemble_LumpedSystem.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp +g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.9 -lboost_python39 -lboost_numpy39 g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_2D.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_3D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp +Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" +g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15753,17 +15772,18 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_1D.cpp:39: + from finley/src/Assemble_PDE_Points.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp +Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" +g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp +g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getAssembleParameters.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getSize.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15781,6 +15801,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" +g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15791,13 +15813,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_3D.cpp:38: + from finley/src/Assemble_PDE_Single_1D.cpp:39: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" +g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15808,14 +15832,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_C.cpp:34: + from finley/src/Assemble_PDE_Single_3D.cpp:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" +g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getSize.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15830,7 +15854,6 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -15844,7 +15867,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_3D.cpp:41: + from finley/src/Assemble_PDE_System_2D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15861,10 +15884,11 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_C.cpp:35: + from finley/src/Assemble_PDE_Single_C.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -15878,13 +15902,16 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_2D.cpp:41: + from finley/src/Assemble_PDE_System_3D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" +g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15912,15 +15939,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getAssembleParameters.cpp:24: + from finley/src/Assemble_PDE_System_C.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp -g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_jacobians.cpp +g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15938,9 +15965,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" -g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 -g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_jacobians.cpp +g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15951,16 +15976,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getSize.cpp:26: + from finley/src/Assemble_getAssembleParameters.cpp:24: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile_jacobians.cpp +g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15978,16 +16002,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" -g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 -g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp -Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" -g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 -Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/IndexList.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_addPoints.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_findMatchingFaces.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15998,18 +16015,16 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_integrate.cpp:25: + from finley/src/Assemble_interpolate.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getTrilinosGraph.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_glueFaces.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16018,10 +16033,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from debian/stage3/include/finley/FinleyDomain.h:60, - from debian/stage3/include/finley/DomainFactory.h:21, - from finley/src/DomainFactory.cpp:18: + from finley/src/Finley.h:32, + from finley/src/Assemble.h:27, + from finley/src/Assemble_integrate.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16038,7 +16052,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_interpolate.cpp:26: + from finley/src/Assemble_getSize.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16053,9 +16067,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/FinleyDomain.cpp:18: + from finley/src/Finley.h:32, + from finley/src/Assemble.h:27, + from finley/src/Assemble_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16071,8 +16085,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, - from finley/src/IndexList.h:28, - from finley/src/IndexList.cpp:25: + from finley/src/ElementFile.h:21, + from finley/src/ElementFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16088,14 +16102,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_addPoints.cpp:25: + from debian/stage3/include/finley/FinleyDomain.h:60, + from debian/stage3/include/finley/DomainFactory.h:21, + from finley/src/DomainFactory.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16106,7 +16122,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/ElementFile.h:21, - from finley/src/ElementFile.cpp:18: + from finley/src/ElementFile_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16123,13 +16139,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_findMatchingFaces.cpp:27: + from finley/src/FinleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16138,16 +16155,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/Assemble.h:27, - from finley/src/Assemble_jacobians.cpp:18: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_glueFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_merge.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_merge.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16156,15 +16173,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/ElementFile.h:21, - from finley/src/ElementFile_jacobians.cpp:18: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_getPasoPattern.cpp:19: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_merge.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_merge.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_optimizeDOFDistribution.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_read.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, @@ -16177,13 +16195,30 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_getPasoPattern.cpp:19: + from finley/src/Mesh_addPoints.cpp:25: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_findMatchingFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/finley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_readGmsh.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -16193,16 +16228,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex8.cpp:30: + from finley/src/Finley.h:32, + from finley/src/IndexList.h:28, + from finley/src/IndexList.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec4.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec4.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec8.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -16214,7 +16249,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_glueFaces.cpp:27: + from finley/src/Mesh_hex20.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16232,14 +16267,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex20.cpp:29: + from finley/src/Mesh_joinFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16250,13 +16284,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_joinFaces.cpp:27: + from finley/src/Mesh_merge.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp +g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16267,16 +16303,16 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_merge.cpp:18: + from finley/src/Mesh_optimizeDOFDistribution.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ReferenceElements.cpp g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ShapeFunctions.cpp +g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16287,23 +16323,23 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_optimizeDOFDistribution.cpp:18: + from finley/src/Mesh_hex8.cpp:30: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +/usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp -/usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/flow.py debian/tmp3/posix/modellib/flow.pyc Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/geometry.py debian/tmp3/posix/modellib/geometry.pyc -Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/input.py debian/tmp3/posix/modellib/input.pyc +Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16314,15 +16350,31 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_read.cpp:18: + from finley/src/Mesh_readGmsh.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" +Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc +/usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc +/usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc +/usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc +/usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc +Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc +Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" +Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" +Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc +/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc +/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc +Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc +Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16333,15 +16385,44 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_readGmsh.cpp:18: + from finley/src/Mesh_rec4.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc +Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" +Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc +/usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc +Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" +/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc +Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" +/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc +Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" +Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" +Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" +Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" +Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" +Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" +Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h" +Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h" +Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h" +g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp +Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h" +Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h" +g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools2.cpp +Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h" +Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h" +Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h" +Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h" +Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h" +g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/ripleycpp.cpp +Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h" +Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h" +Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h" +g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Brick.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16352,17 +16433,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_write.cpp:18: + from finley/src/Mesh_rec8.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc -Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16373,43 +16450,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_rec4.cpp:18: + from finley/src/Mesh_read.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" -Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" -Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc -Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc -Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc -Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc -Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc -Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc -Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc -Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" -Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" -Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" -Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" -Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h" -Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" -Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h" -Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h" -g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp -g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools2.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16420,26 +16467,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_rec8.cpp:18: + from finley/src/Mesh_write.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h" -Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h" -Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h" -Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h" -Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h" -Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h" -Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h" -Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h" -Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h" -g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/ripleycpp.cpp -Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h" -Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h" -g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Brick.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16454,10 +16488,11 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler2D.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h" +g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler2D.cpp g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler3D.cpp g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/domainhelpers.cpp Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h" @@ -16484,8 +16519,6 @@ g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiRectangle.cpp Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h" g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Rectangle.cpp -g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/RipleyDomain.cpp -g++ -o debian/tmp3/posix/ripley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16494,17 +16527,18 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/DefaultAssembler2D.h:20, - from ripley/src/DefaultAssembler2D.cpp:18: + from debian/stage3/include/escript/AbstractDomain.h:24, + from debian/stage3/include/escript/FunctionSpace.h:24, + from debian/stage3/include/escript/AbstractSystemMatrix.h:22, + from debian/stage3/include/ripley/AbstractAssembler.h:21, + from ripley/src/ripleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16513,17 +16547,18 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/escript/AbstractDomain.h:24, - from debian/stage3/include/escript/FunctionSpace.h:24, - from debian/stage3/include/escript/AbstractSystemMatrix.h:22, - from debian/stage3/include/ripley/AbstractAssembler.h:21, - from ripley/src/ripleycpp.cpp:18: + from debian/stage3/include/ripley/Ripley.h:28, + from debian/stage3/include/ripley/RipleyDomain.h:21, + from debian/stage3/include/ripley/Brick.h:26, + from ripley/src/Brick.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler2D.cpp +g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16534,15 +16569,21 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/DefaultAssembler3D.h:20, - from ripley/src/DefaultAssembler3D.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/DefaultAssembler2D.h:20, + from ripley/src/DefaultAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" +g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" +/usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc +Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16552,19 +16593,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from ripley/src/Brick.cpp:18: + from debian/stage3/include/ripley/domainhelpers.h:20, + from ripley/src/domainhelpers.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler3D.cpp -/usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc -g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 -Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" Install file: "speckley/src/AbstractAssembler.h" as "debian/stage3/include/speckley/AbstractAssembler.h" Install file: "speckley/src/Brick.h" as "debian/stage3/include/speckley/Brick.h" Install file: "speckley/src/Rectangle.h" as "debian/stage3/include/speckley/Rectangle.h" @@ -16585,8 +16621,8 @@ from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/LameAssembler3D.h:20, - from ripley/src/LameAssembler3D.cpp:18: + from debian/stage3/include/ripley/DefaultAssembler3D.h:20, + from ripley/src/DefaultAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16603,17 +16639,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/MultiBrick.h:21, - from ripley/src/MultiBrick.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/MultiRectangle.h:21, + from ripley/src/MultiRectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" -g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16623,8 +16657,10 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/domainhelpers.h:20, - from ripley/src/domainhelpers.cpp:18: + from debian/stage3/include/ripley/RipleyDomain.h:21, + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/MultiBrick.h:21, + from ripley/src/MultiBrick.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16641,17 +16677,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/LameAssembler2D.h:20, - from ripley/src/LameAssembler2D.cpp:18: + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/LameAssembler3D.h:20, + from ripley/src/LameAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" -g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/AbstractAssembler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16663,7 +16697,8 @@ from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, from debian/stage3/include/ripley/Rectangle.h:26, - from ripley/src/Rectangle.cpp:18: + from debian/stage3/include/ripley/LameAssembler2D.h:20, + from ripley/src/LameAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16681,8 +16716,7 @@ from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/MultiRectangle.h:21, - from ripley/src/MultiRectangle.cpp:18: + from ripley/src/Rectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16716,9 +16750,9 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/WaveAssembler2D.h:20, - from ripley/src/WaveAssembler2D.cpp:18: + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/WaveAssembler3D.h:20, + from ripley/src/WaveAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16733,16 +16767,18 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/domainhelpers.h:20, - from debian/stage3/include/speckley/AbstractAssembler.h:21, - from speckley/src/speckleycpp.cpp:18: + from debian/stage3/include/ripley/Ripley.h:28, + from debian/stage3/include/ripley/RipleyDomain.h:21, + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/WaveAssembler2D.h:20, + from ripley/src/WaveAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/AbstractAssembler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16751,17 +16787,21 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/WaveAssembler3D.h:20, - from ripley/src/WaveAssembler3D.cpp:18: + from debian/stage3/include/speckley/Speckley.h:28, + from debian/stage3/include/speckley/domainhelpers.h:20, + from debian/stage3/include/speckley/AbstractAssembler.h:21, + from speckley/src/speckleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h" +Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h" +Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h" +g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Brick.cpp +g++ -o debian/tmp3/posix/speckley/src/BrickGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickGradients.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16780,11 +16820,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h" -Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h" -Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h" -g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Brick.cpp -g++ -o debian/tmp3/posix/speckley/src/BrickGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickGradients.cpp g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickIntegrals.cpp g++ -o debian/tmp3/posix/speckley/src/BrickReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickReductions.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, @@ -16807,7 +16842,6 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h" g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler2D.cpp -g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16844,7 +16878,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp +g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16863,8 +16897,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h" -g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Rectangle.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16884,6 +16916,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16901,6 +16934,16 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h" +g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Rectangle.cpp +g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp +g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleIntegrals.cpp +g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp +g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp +g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp +g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler3D.cpp +Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h" +g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/CrossDomainCoupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16918,12 +16961,14 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp -g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleIntegrals.cpp -g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp -g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp -g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp -g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler3D.cpp +Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h" +Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h" +Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h" +Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h" +Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h" +Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h" +Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h" +Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16935,26 +16980,16 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/Rectangle.cpp:18: + from speckley/src/RectangleGradients.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h" -g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/CrossDomainCoupler.cpp -Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h" -Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h" -Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h" -Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h" -Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h" -Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h" -Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h" -Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h" Install file: "weipa/src/weipa.h" as "debian/stage3/include/weipa/weipa.h" Install file: "weipa/src/FinleyDomain.h" as "debian/stage3/include/weipa/FinleyDomain.h" Install file: "weipa/src/FinleyElements.h" as "debian/stage3/include/weipa/FinleyElements.h" +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "weipa/src/FinleyNodes.h" as "debian/stage3/include/weipa/FinleyNodes.h" Install file: "weipa/src/RipleyDomain.h" as "debian/stage3/include/weipa/RipleyDomain.h" Install file: "weipa/src/RipleyElements.h" as "debian/stage3/include/weipa/RipleyElements.h" @@ -16974,13 +17009,14 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/RectangleGradients.cpp:18: + from speckley/src/Rectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16992,7 +17028,7 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/RectangleIntegrals.cpp:18: + from speckley/src/RectangleReductions.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17025,9 +17061,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/SpeckleyDomain.h:21, - from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/RectangleReductions.cpp:18: + from debian/stage3/include/speckley/WaveAssembler3D.h:20, + from speckley/src/WaveAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17045,15 +17080,13 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from debian/stage3/include/speckley/WaveAssembler2D.h:20, - from speckley/src/WaveAssembler2D.cpp:18: + from speckley/src/RectangleIntegrals.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17063,15 +17096,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/WaveAssembler3D.h:20, - from speckley/src/WaveAssembler3D.cpp:18: + from debian/stage3/include/speckley/SpeckleyDomain.h:21, + from debian/stage3/include/speckley/Rectangle.h:21, + from debian/stage3/include/speckley/WaveAssembler2D.h:20, + from speckley/src/WaveAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17080,15 +17114,15 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/DataVar.h:21, - from weipa/src/DataVar.cpp:18: + from debian/stage3/include/weipa/EscriptDataset.h:21, + from weipa/src/EscriptDataset.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17108,11 +17142,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyElements.cpp -g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp -g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp -g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp -g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17121,15 +17150,24 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/EscriptDataset.h:21, - from weipa/src/EscriptDataset.cpp:18: + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/DataVar.h:21, + from weipa/src/DataVar.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyElements.cpp +g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp +Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" +g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyDomain.cpp +g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17144,15 +17182,11 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lpython3.9 -lboost_python39 -lboost_numpy39 g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyNodes.cpp g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/VisItControl.cpp -Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" -g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/weipacpp.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17161,9 +17195,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/FinleyNodes.h:21, - from weipa/src/FinleyNodes.cpp:18: + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/RipleyDomain.h:21, + from weipa/src/RipleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17179,14 +17213,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/FinleyElements.h:21, - from weipa/src/FinleyElements.cpp:18: + from debian/stage3/include/weipa/RipleyElements.h:21, + from weipa/src/RipleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/weipacpp.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17195,9 +17230,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/RipleyDomain.h:21, - from weipa/src/RipleyDomain.cpp:18: + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/RipleyNodes.h:21, + from weipa/src/RipleyNodes.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17212,9 +17247,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/RipleyElements.h:21, - from weipa/src/RipleyElements.cpp:18: + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/FinleyNodes.h:21, + from weipa/src/FinleyNodes.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17229,9 +17264,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/RipleyNodes.h:21, - from weipa/src/RipleyNodes.cpp:18: + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/FinleyElements.h:21, + from weipa/src/FinleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17246,9 +17281,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/SpeckleyElements.h:21, - from weipa/src/SpeckleyElements.cpp:18: + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/SpeckleyDomain.h:21, + from weipa/src/SpeckleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17263,9 +17298,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/SpeckleyDomain.h:21, - from weipa/src/SpeckleyDomain.cpp:18: + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/SpeckleyElements.h:21, + from weipa/src/SpeckleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17616,6 +17651,8 @@ -------------esys.pycad ..esys.pycad.transformations.pyc ..esys.pycad.transformations +..esys.pycad.primitives.pyc +..esys.pycad.primitives ..esys.pycad.shapes.pyc ..esys.pycad.shapes ..esys.pycad.gmsh.pyc @@ -17657,8 +17694,6 @@ os print_function tempfile -..esys.pycad.primitives.pyc -..esys.pycad.primitives ..esys.pycad.extras.pyc ..esys.pycad.extras esys.pycad.extras @@ -17764,14 +17799,15 @@ division print_function -------------esys.modellib -..esys.modellib.temperature.pyc -..esys.modellib.temperature -esys.modellib.temperature -Starting dump on esys.modellib.temperature with ignore at [] +..esys.modellib.visualization.pyc +..esys.modellib.visualization +esys.modellib.visualization +Starting dump on esys.modellib.visualization with ignore at [] Data - IterationDivergenceError + Link Model - TemperatureAdvection + Visualization + WriteVTK __builtins__ __cached__ __copyright__ @@ -17784,23 +17820,17 @@ __spec__ __url__ division - grad - inf - inner - length - lpde - numpy + os print_function - sup -..esys.modellib.visualization.pyc -..esys.modellib.visualization -esys.modellib.visualization -Starting dump on esys.modellib.visualization with ignore at [] + saveVTK +..esys.modellib.temperature.pyc +..esys.modellib.temperature +esys.modellib.temperature +Starting dump on esys.modellib.temperature with ignore at [] Data - Link + IterationDivergenceError Model - Visualization - WriteVTK + TemperatureAdvection __builtins__ __cached__ __copyright__ @@ -17813,9 +17843,14 @@ __spec__ __url__ division - os + grad + inf + inner + length + lpde + numpy print_function - saveVTK + sup ..esys.modellib.probe.pyc ..esys.modellib.probe esys.modellib.probe @@ -19794,8 +19829,6 @@ subsidence xrange -------------esys.downunder -..esys.downunder.minimizers.pyc -..esys.downunder.minimizers ..esys.downunder.splitminimizers.pyc ..esys.downunder.splitminimizers esys.downunder.splitminimizers @@ -19817,6 +19850,10 @@ division np print_function +..esys.downunder.minimizers.pyc +..esys.downunder.minimizers +..esys.downunder.regularizations.pyc +..esys.downunder.regularizations ..esys.downunder.seismic.pyc ..esys.downunder.seismic esys.downunder.seismic @@ -19853,12 +19890,18 @@ print_function sys time -..esys.downunder.splitregularizations.pyc -..esys.downunder.splitregularizations -esys.downunder.splitregularizations -Starting dump on esys.downunder.splitregularizations with ignore at [] - CostFunction - SplitRegularization +..esys.downunder.splitinversioncostfunctions.pyc +..esys.downunder.splitinversioncostfunctions +esys.downunder.splitinversioncostfunctions +Starting dump on esys.downunder.splitinversioncostfunctions with ignore at [] + ArithmeticTuple + Data + ForwardModel + FunctionJob + Job + Mapping + MeteredCostFunction + SplitInversionCostFunction __all__ __builtins__ __cached__ @@ -19872,25 +19915,16 @@ __spec__ __url__ division - escript - linearPDEs - logging - makeTransformation + inner np - pdetools print_function -..esys.downunder.splitinversioncostfunctions.pyc -..esys.downunder.splitinversioncostfunctions -esys.downunder.splitinversioncostfunctions -Starting dump on esys.downunder.splitinversioncostfunctions with ignore at [] - ArithmeticTuple - Data - ForwardModel - FunctionJob - Job - Mapping - MeteredCostFunction - SplitInversionCostFunction + updateHessianWorker +..esys.downunder.splitregularizations.pyc +..esys.downunder.splitregularizations +esys.downunder.splitregularizations +Starting dump on esys.downunder.splitregularizations with ignore at [] + CostFunction + SplitRegularization __all__ __builtins__ __cached__ @@ -19904,12 +19938,13 @@ __spec__ __url__ division - inner + escript + linearPDEs + logging + makeTransformation np + pdetools print_function - updateHessianWorker -..esys.downunder.regularizations.pyc -..esys.downunder.regularizations ..esys.downunder.mappings.pyc ..esys.downunder.mappings ..esys.downunder.magtel2d.pyc @@ -19988,10 +20023,10 @@ numpy print_function sys -..esys.downunder.inversions.pyc -..esys.downunder.inversions ..esys.downunder.inversioncostfunctions.pyc ..esys.downunder.inversioncostfunctions +..esys.downunder.inversions.pyc +..esys.downunder.inversions ..esys.downunder.domainbuilder.pyc ..esys.downunder.domainbuilder esys.downunder.domainbuilder @@ -20049,10 +20084,10 @@ print_function saveSilo xrange -..esys.downunder.coordinates.pyc -..esys.downunder.coordinates ..esys.downunder.costfunctions.pyc ..esys.downunder.costfunctions +..esys.downunder.coordinates.pyc +..esys.downunder.coordinates Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/forwardmodels esys.downunder.forwardmodels Starting dump on esys.downunder.forwardmodels with ignore at [] @@ -21105,23 +21140,23 @@ zeros Dump of esys.downunder.forwardmodels complete -------------esys.downunder.forwardmodels -..esys.downunder.forwardmodels.gravity.pyc -..esys.downunder.forwardmodels.gravity -esys.downunder.forwardmodels.gravity -Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] +..esys.downunder.forwardmodels.subsidence.pyc +..esys.downunder.forwardmodels.subsidence +esys.downunder.forwardmodels.subsidence +Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModelWithPotential - GravityModel + ForwardModel + FunctionOnBoundary L2 + LinearPDESystem Lsup NumpyToData - PI - U + Subsidence __all__ __builtins__ __cached__ @@ -21264,23 +21299,26 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.subsidence.pyc -..esys.downunder.forwardmodels.subsidence -esys.downunder.forwardmodels.subsidence -Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] +..esys.downunder.forwardmodels.pressure.pyc +..esys.downunder.forwardmodels.pressure +esys.downunder.forwardmodels.pressure +Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModel - FunctionOnBoundary + Function + IsostaticPressure L2 - LinearPDESystem + LinearSinglePDE Lsup NumpyToData - Subsidence + PI + Scalar + U + Vector __all__ __builtins__ __cached__ @@ -21363,6 +21401,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -21423,52 +21462,23 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetotelluric2d.pyc -..esys.downunder.forwardmodels.magnetotelluric2d -esys.downunder.forwardmodels.magnetotelluric2d -Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] - ForwardModel - MT2DBase - MT2DModelTEMode - MT2DModelTMMode - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - coords - division - escript - lpde - math - print_function -..esys.downunder.forwardmodels.pressure.pyc -..esys.downunder.forwardmodels.pressure -esys.downunder.forwardmodels.pressure -Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] +..esys.downunder.forwardmodels.gravity.pyc +..esys.downunder.forwardmodels.gravity +esys.downunder.forwardmodels.gravity +Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - Function - IsostaticPressure + ForwardModelWithPotential + GravityModel L2 - LinearSinglePDE Lsup NumpyToData PI - Scalar U - Vector __all__ __builtins__ __cached__ @@ -21551,7 +21561,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -21612,25 +21621,24 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.dcresistivity.pyc -..esys.downunder.forwardmodels.dcresistivity -esys.downunder.forwardmodels.dcresistivity -Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] +..esys.downunder.forwardmodels.magnetic.pyc +..esys.downunder.forwardmodels.magnetic +esys.downunder.forwardmodels.magnetic +Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data - DcRes - DiracDeltaFunctions EPSILON FileWriter - ForwardModel + ForwardModelWithPotential L2 - LinearPDE - Locator Lsup + MagneticIntensityModel + MagneticModel NumpyToData Scalar + SelfDemagnetizationModel __all__ __builtins__ __cached__ @@ -21713,7 +21721,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -21774,22 +21781,51 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.base.pyc -..esys.downunder.forwardmodels.base -esys.downunder.forwardmodels.base -Starting dump on esys.downunder.forwardmodels.base with ignore at [] +..esys.downunder.forwardmodels.magnetotelluric2d.pyc +..esys.downunder.forwardmodels.magnetotelluric2d +esys.downunder.forwardmodels.magnetotelluric2d +Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] + ForwardModel + MT2DBase + MT2DModelTEMode + MT2DModelTMMode + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + coords + division + escript + lpde + math + print_function +..esys.downunder.forwardmodels.dcresistivity.pyc +..esys.downunder.forwardmodels.dcresistivity +esys.downunder.forwardmodels.dcresistivity +Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data + DcRes + DiracDeltaFunctions EPSILON FileWriter ForwardModel - ForwardModelWithPotential L2 - LinearSinglePDE + LinearPDE + Locator Lsup NumpyToData + Scalar __all__ __builtins__ __cached__ @@ -21889,7 +21925,6 @@ negative nonsymmetric normalize - np numbers numpy os @@ -21934,24 +21969,47 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetic.pyc -..esys.downunder.forwardmodels.magnetic -esys.downunder.forwardmodels.magnetic -Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] +..esys.downunder.forwardmodels.acoustic.pyc +..esys.downunder.forwardmodels.acoustic +esys.downunder.forwardmodels.acoustic +Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] + AcousticWaveForm + ForwardModel + HAVE_DIRECT + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + edc + escript + lpde + np + print_function +..esys.downunder.forwardmodels.base.pyc +..esys.downunder.forwardmodels.base +esys.downunder.forwardmodels.base +Starting dump on esys.downunder.forwardmodels.base with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter + ForwardModel ForwardModelWithPotential L2 + LinearSinglePDE Lsup - MagneticIntensityModel - MagneticModel NumpyToData - Scalar - SelfDemagnetizationModel __all__ __builtins__ __cached__ @@ -22034,6 +22092,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -22050,6 +22109,7 @@ negative nonsymmetric normalize + np numbers numpy os @@ -22094,31 +22154,6 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.acoustic.pyc -..esys.downunder.forwardmodels.acoustic -esys.downunder.forwardmodels.acoustic -Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] - AcousticWaveForm - ForwardModel - HAVE_DIRECT - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - edc - escript - lpde - np - print_function Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/apps esys.downunder.apps Starting dump on esys.downunder.apps with ignore at [] @@ -22361,16 +22396,16 @@ whereZero zeros -------------esys.downunder.apps -..esys.downunder.apps.magneticModels.pyc -..esys.downunder.apps.magneticModels -..esys.downunder.apps.MTModels.pyc -..esys.downunder.apps.MTModels ..esys.downunder.apps.gravityModels.pyc ..esys.downunder.apps.gravityModels +..esys.downunder.apps.magneticModels.pyc +..esys.downunder.apps.magneticModels ..esys.downunder.apps.seismicModels.pyc ..esys.downunder.apps.seismicModels ..esys.downunder.apps.dcModels.pyc ..esys.downunder.apps.dcModels +..esys.downunder.apps.MTModels.pyc +..esys.downunder.apps.MTModels Running Sphinx v3.4.3 WARNING: html_static_path entry '_static' does not exist building [mo]: targets for 0 po files that are out of date @@ -22654,20 +22689,20 @@ os.makedirs(esys/speckley) Copy: /build/reproducible-path/python-escript-5.6/speckley/py_src/__init__.py esys/speckley/__init__.py os.makedirs(esys/ripley) -Copy: /build/reproducible-path/python-escript-5.6/ripley/py_src/MultiResolutionDomain.py esys/ripley/MultiResolutionDomain.py Copy: /build/reproducible-path/python-escript-5.6/ripley/py_src/__init__.py esys/ripley/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/ripley/py_src/MultiResolutionDomain.py esys/ripley/MultiResolutionDomain.py os.makedirs(esys/pycad) Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/transformations.py esys/pycad/transformations.py +Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/primitives.py esys/pycad/primitives.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/shapes.py esys/pycad/shapes.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/gmsh.py esys/pycad/gmsh.py -Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/primitives.py esys/pycad/primitives.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/extras.py esys/pycad/extras.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/design.py esys/pycad/design.py -Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/__init__.py esys/pycad/__init__.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/Triangle.py esys/pycad/Triangle.py +Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/__init__.py esys/pycad/__init__.py os.makedirs(esys/modellib) -Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/temperature.py esys/modellib/temperature.py Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/visualization.py esys/modellib/visualization.py +Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/temperature.py esys/modellib/temperature.py Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/probe.py esys/modellib/probe.py Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/mechanics.py esys/modellib/mechanics.py Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/materials.py esys/modellib/materials.py @@ -22686,22 +22721,22 @@ Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/testing.py esys/escriptcore/testing.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/start.py esys/escriptcore/start.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/splitworld.py esys/escriptcore/splitworld.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/runmodel.py esys/escriptcore/runmodel.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/rheologies.py esys/escriptcore/rheologies.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/pdetools.py esys/escriptcore/pdetools.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/rheologies.py esys/escriptcore/rheologies.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/runmodel.py esys/escriptcore/runmodel.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/nonlinearPDE.py esys/escriptcore/nonlinearPDE.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/mountains.py esys/escriptcore/mountains.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/modelframe.py esys/escriptcore/modelframe.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/models.py esys/escriptcore/models.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/linearPDEs.py esys/escriptcore/linearPDEs.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/modelframe.py esys/escriptcore/modelframe.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/levelset.py esys/escriptcore/levelset.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/heat.py esys/escriptcore/heat.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/gmshrunner.py esys/escriptcore/gmshrunner.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/flows.py esys/escriptcore/flows.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/faultsystems.py esys/escriptcore/faultsystems.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/gmshrunner.py esys/escriptcore/gmshrunner.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/datamanager.py esys/escriptcore/datamanager.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/domainCouplers.py esys/escriptcore/domainCouplers.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/benchmark.py esys/escriptcore/benchmark.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/datamanager.py esys/escriptcore/datamanager.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/__init__.py esys/escriptcore/__init__.py os.makedirs(esys/escriptcore/symbolic) Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/utils.py esys/escriptcore/symbolic/utils.py @@ -22709,8 +22744,8 @@ Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symbol.py esys/escriptcore/symbolic/symbol.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/pretty.py esys/escriptcore/symbolic/pretty.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/functions.py esys/escriptcore/symbolic/functions.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/evaluator.py esys/escriptcore/symbolic/evaluator.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/__init__.py esys/escriptcore/symbolic/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/evaluator.py esys/escriptcore/symbolic/evaluator.py os.makedirs(esys/escript) Copy: /build/reproducible-path/python-escript-5.6/escript/py_src/util.py esys/escript/util.py Copy: /build/reproducible-path/python-escript-5.6/escript/py_src/unitsSI.py esys/escript/unitsSI.py @@ -22727,51 +22762,51 @@ Copy: /build/reproducible-path/python-escript-5.6/dudley/py_src/factorywrappers.py esys/dudley/factorywrappers.py Copy: /build/reproducible-path/python-escript-5.6/dudley/py_src/__init__.py esys/dudley/__init__.py os.makedirs(esys/downunder) -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/minimizers.py esys/downunder/minimizers.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitminimizers.py esys/downunder/splitminimizers.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/minimizers.py esys/downunder/minimizers.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/regularizations.py esys/downunder/regularizations.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/seismic.py esys/downunder/seismic.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitregularizations.py esys/downunder/splitregularizations.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitinversioncostfunctions.py esys/downunder/splitinversioncostfunctions.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/regularizations.py esys/downunder/regularizations.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitregularizations.py esys/downunder/splitregularizations.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/mappings.py esys/downunder/mappings.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel2d.py esys/downunder/magtel2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel1d.py esys/downunder/magtel1d.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversions.py esys/downunder/inversions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversioncostfunctions.py esys/downunder/inversioncostfunctions.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversions.py esys/downunder/inversions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/domainbuilder.py esys/downunder/domainbuilder.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/datasources.py esys/downunder/datasources.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/dcresistivityforwardmodeling.py esys/downunder/dcresistivityforwardmodeling.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/coordinates.py esys/downunder/coordinates.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/costfunctions.py esys/downunder/costfunctions.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/coordinates.py esys/downunder/coordinates.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/__init__.py esys/downunder/__init__.py os.makedirs(esys/downunder/forwardmodels) -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/subsidence.py esys/downunder/forwardmodels/subsidence.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetotelluric2d.py esys/downunder/forwardmodels/magnetotelluric2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/pressure.py esys/downunder/forwardmodels/pressure.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetic.py esys/downunder/forwardmodels/magnetic.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetotelluric2d.py esys/downunder/forwardmodels/magnetotelluric2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/dcresistivity.py esys/downunder/forwardmodels/dcresistivity.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/acoustic.py esys/downunder/forwardmodels/acoustic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/base.py esys/downunder/forwardmodels/base.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetic.py esys/downunder/forwardmodels/magnetic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/__init__.py esys/downunder/forwardmodels/__init__.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/acoustic.py esys/downunder/forwardmodels/acoustic.py os.makedirs(esys/downunder/apps) -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/MTModels.py esys/downunder/apps/MTModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/gravityModels.py esys/downunder/apps/gravityModels.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/seismicModels.py esys/downunder/apps/seismicModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/dcModels.py esys/downunder/apps/dcModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/__init__.py esys/downunder/apps/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/MTModels.py esys/downunder/apps/MTModels.py cp /build/reproducible-path/python-escript-5.6/doc/manpage/man1/run-escript.1 /build/reproducible-path/python-escript-5.6/debian/stage3/run-escript3.man ln /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript3 find /build/reproducible-path/python-escript-5.6/debian/stage3 -name '*.pyc' -print0| xargs -0 rm -f mkdir -p /build/reproducible-path/python-escript-5.6/debian/tmp3 -scons -j16 build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs +scons -j15 build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs scons: Reading SConscript files ... 3.9.2 (default, Feb 28 2021, 17:03:44) [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... (cached) yes Checking for C++ function gethostname()... (cached) yes Checking for C++ header file byteswap.h... (cached) yes @@ -22790,7 +22825,7 @@ Checking for C++ library umfpack... (cached) yes Checking for C++ library siloh5... (cached) yes Checking for C++ library boost_iostreams... (cached) yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-p7rscv18 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-fx82_j19 because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -22806,7 +22841,9 @@ cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh (cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - Install file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" -sh: 1: svnversion: not found +Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +sh: line 1: svnversion: command not found warning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. @@ -22817,24 +22854,17 @@ To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! -Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" -Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" -Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" +Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" -Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" -Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" -Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" -Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" -Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" Doxygen version used: 1.9.1 Searching for include files... Searching for example files... @@ -22885,15 +22915,15 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/srcInstall file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" -Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" +Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/srcInstall file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" +Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" Install file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" -Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" +Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" -Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" -Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" -Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" +Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" /build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) /Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... @@ -22941,11 +22971,12 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... -Parsing Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" +Parsing Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" -Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" -Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" +Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" +Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... @@ -23035,7 +23066,11 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.h... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.h... +Parsing file /build/reproducible-path/pytInstall file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" +Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" +Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" +hon-escript-5.6/escriptcore/src/Random.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h... @@ -24873,40 +24908,18 @@ parameter 'tags' parameter 'tagnamestonums' parameter 'w' -Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" -Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:46: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'order' parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' -Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" -Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" -Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" -Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" -Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" -Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" -Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" -Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" -Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'order' parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' -Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" paso::MUMPS_Handler< cplx_t >... Generating docs for compound paso::Options... Generating docs for compound paso::PasoException... @@ -24988,37 +25001,59 @@ Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... -Generating mInstall file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" +Generating member index... +Generating file index... +Generating file member index... +Generating example index... +finalizing index lists... +writing tag file... +Running plantuml with JAVA... +lookup cache used 19453/65536 hits=310549 misses=20580 +finished... +Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" +Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" +Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" +Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" +Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" +Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" +Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" +Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" +Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" +Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" +Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" -ember index... -Generating file index... -Generating file member index... -Generating example index... -finalizing index lists... -writing tag file... -Running plantuml with JAVA... -lookup cache used 19453/65536 hits=310549 misses=20580 -finished... Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc" @@ -25034,11 +25069,11 @@ Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" -Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" +Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" -Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" +Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" +Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" Install file: "debian/tmp3/posix/weipa/py/__init__.pyc" as "debian/stage3/esys/weipa/__init__.pyc" /usr/bin/python3 doc/sphinx_api/genrst.py /build/reproducible-path/python-escript-5.6/debian/stage3 esys /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int && sphinx-build -v -E --color -b html -d /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int/tree -c doc/sphinx_api -D mathjax_path=file:///usr/share/javascript/mathjax/MathJax.js /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api @@ -25332,12 +25367,12 @@ shapes transformations -------------esys.pycad -..esys.pycad.primitives.pyc -..esys.pycad.primitives -..esys.pycad.shapes.pyc -..esys.pycad.shapes ..esys.pycad.transformations.pyc ..esys.pycad.transformations +..esys.pycad.shapes.pyc +..esys.pycad.shapes +..esys.pycad.primitives.pyc +..esys.pycad.primitives ..esys.pycad.gmsh.pyc ..esys.pycad.gmsh esys.pycad.gmsh @@ -25510,6 +25545,34 @@ os print_function saveVTK +..esys.modellib.temperature.pyc +..esys.modellib.temperature +esys.modellib.temperature +Starting dump on esys.modellib.temperature with ignore at [] + Data + IterationDivergenceError + Model + TemperatureAdvection + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + grad + inf + inner + length + lpde + numpy + print_function + sup ..esys.modellib.probe.pyc ..esys.modellib.probe esys.modellib.probe @@ -25668,34 +25731,6 @@ wherePositive whereZero zeros -..esys.modellib.temperature.pyc -..esys.modellib.temperature -esys.modellib.temperature -Starting dump on esys.modellib.temperature with ignore at [] - Data - IterationDivergenceError - Model - TemperatureAdvection - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - grad - inf - inner - length - lpde - numpy - print_function - sup ..esys.modellib.mechanics.pyc ..esys.modellib.mechanics esys.modellib.mechanics @@ -26788,22 +26823,13 @@ evaluator print_function symbol -..esys.escript.models.pyc -..esys.escript.models -esys.escript.models -Starting dump on esys.escript.models with ignore at [] - DarcyFlow - FaultSystem - IncompressibleIsotropicFlowCartesian - LevelSet - MaxIterReached - Mountains - PowerLaw - Rheology - StokesProblemCartesian - SubSteppingException - TemperatureCartesian - Tracer +..esys.escript.splitworld.pyc +..esys.escript.splitworld +esys.escript.splitworld +Starting dump on esys.escript.splitworld with ignore at [] + FunctionJob + Job + SplitWorld __builtins__ __cached__ __doc__ @@ -26813,16 +26839,9 @@ __package__ __spec__ division - es - esc escore - escript - lpe - math - pdt print_function - sys - util + warnings ..esys.escript.pdetools.pyc ..esys.escript.pdetools esys.escript.pdetools @@ -26865,6 +26884,41 @@ numpy print_function util +..esys.escript.models.pyc +..esys.escript.models +esys.escript.models +Starting dump on esys.escript.models with ignore at [] + DarcyFlow + FaultSystem + IncompressibleIsotropicFlowCartesian + LevelSet + MaxIterReached + Mountains + PowerLaw + Rheology + StokesProblemCartesian + SubSteppingException + TemperatureCartesian + Tracer + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + es + esc + escore + escript + lpe + math + pdt + print_function + sys + util ..esys.escript.modelframe.pyc ..esys.escript.modelframe esys.escript.modelframe @@ -26905,45 +26959,6 @@ reduce sys time -..esys.escript.datamanager.pyc -..esys.escript.datamanager -esys.escript.datamanager -Starting dump on esys.escript.datamanager with ignore at [] - DataManager - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - esc - os - pickle - print_function - shutil - util -..esys.escript.splitworld.pyc -..esys.escript.splitworld -esys.escript.splitworld -Starting dump on esys.escript.splitworld with ignore at [] - FunctionJob - Job - SplitWorld - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - escore - print_function - warnings ..esys.escript.linearPDEs.pyc ..esys.escript.linearPDEs esys.escript.linearPDEs @@ -27171,6 +27186,26 @@ wherePositive whereZero zeros +..esys.escript.datamanager.pyc +..esys.escript.datamanager +esys.escript.datamanager +Starting dump on esys.escript.datamanager with ignore at [] + DataManager + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + esc + os + pickle + print_function + shutil + util Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/dudley esys.dudley Starting dump on esys.dudley with ignore at [] @@ -27516,32 +27551,12 @@ subsidence xrange -------------esys.downunder -..esys.downunder.splitregularizations.pyc -..esys.downunder.splitregularizations -esys.downunder.splitregularizations -Starting dump on esys.downunder.splitregularizations with ignore at [] - CostFunction - SplitRegularization - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - escript - linearPDEs - logging - makeTransformation - np - pdetools - print_function +..esys.downunder.costfunctions.pyc +..esys.downunder.costfunctions +..esys.downunder.inversioncostfunctions.pyc +..esys.downunder.inversioncostfunctions +..esys.downunder.minimizers.pyc +..esys.downunder.minimizers ..esys.downunder.splitminimizers.pyc ..esys.downunder.splitminimizers esys.downunder.splitminimizers @@ -27563,6 +27578,32 @@ division np print_function +..esys.downunder.magtel1d.pyc +..esys.downunder.magtel1d +esys.downunder.magtel1d +Starting dump on esys.downunder.magtel1d with ignore at [] + MT_1D + __author__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + cmath + division + numpy + print_function + sys +..esys.downunder.mappings.pyc +..esys.downunder.mappings +..esys.downunder.regularizations.pyc +..esys.downunder.regularizations ..esys.downunder.splitinversioncostfunctions.pyc ..esys.downunder.splitinversioncostfunctions esys.downunder.splitinversioncostfunctions @@ -27628,19 +27669,19 @@ print_function sys time -..esys.downunder.regularizations.pyc -..esys.downunder.regularizations -..esys.downunder.minimizers.pyc -..esys.downunder.minimizers -..esys.downunder.mappings.pyc -..esys.downunder.mappings -..esys.downunder.magtel2d.pyc -..esys.downunder.magtel2d -esys.downunder.magtel2d -Starting dump on esys.downunder.magtel2d with ignore at [] - HAVE_FINLEY - MT_2D - __author__ +..esys.downunder.domainbuilder.pyc +..esys.downunder.domainbuilder +esys.downunder.domainbuilder +Starting dump on esys.downunder.domainbuilder with ignore at [] + Brick + CartesianReferenceSystem + DataSource + DomainBuilder + HAVE_RIPLEY + Rectangle + ReferenceSystem + U + __all__ __builtins__ __cached__ __copyright__ @@ -27652,16 +27693,17 @@ __package__ __spec__ __url__ - cmath division - escript - finley - math - mt1d -About to dump mt1d(esys.downunder.magtel1d) -esys.downunder.magtel1d -Starting dump on esys.downunder.magtel1d with ignore at [] - MT_1D + esu + logging + np + print_function +..esys.downunder.magtel2d.pyc +..esys.downunder.magtel2d +esys.downunder.magtel2d +Starting dump on esys.downunder.magtel2d with ignore at [] + HAVE_FINLEY + MT_2D __author__ __builtins__ __cached__ @@ -27676,10 +27718,10 @@ __url__ cmath division - numpy - print_function - sys -Dump of esys.downunder.magtel2d complete + escript + finley + math + mt1d numpy os pde @@ -27688,12 +27730,13 @@ sys types weipa -..esys.downunder.magtel1d.pyc -..esys.downunder.magtel1d -esys.downunder.magtel1d -Starting dump on esys.downunder.magtel1d with ignore at [] - MT_1D - __author__ +..esys.downunder.splitregularizations.pyc +..esys.downunder.splitregularizations +esys.downunder.splitregularizations +Starting dump on esys.downunder.splitregularizations with ignore at [] + CostFunction + SplitRegularization + __all__ __builtins__ __cached__ __copyright__ @@ -27705,50 +27748,18 @@ __package__ __spec__ __url__ - cmath division - numpy + escript + linearPDEs + logging + makeTransformation + np + pdetools print_function - sys ..esys.downunder.inversions.pyc ..esys.downunder.inversions -..esys.downunder.inversioncostfunctions.pyc -..esys.downunder.inversioncostfunctions ..esys.downunder.datasources.pyc ..esys.downunder.datasources -..esys.downunder.domainbuilder.pyc -..esys.downunder.domainbuilder -esys.downunder.domainbuilder -Starting dump on esys.downunder.domainbuilder with ignore at [] - Brick - CartesianReferenceSystem - DataSource - DomainBuilder - HAVE_RIPLEY - Rectangle - ReferenceSystem - U - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - esu - logging - np - print_function -..esys.downunder.coordinates.pyc -..esys.downunder.coordinates -..esys.downunder.costfunctions.pyc -..esys.downunder.costfunctions ..esys.downunder.dcresistivityforwardmodeling.pyc ..esys.downunder.dcresistivityforwardmodeling esys.downunder.dcresistivityforwardmodeling @@ -27775,6 +27786,8 @@ print_function saveSilo xrange +..esys.downunder.coordinates.pyc +..esys.downunder.coordinates Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/forwardmodels esys.downunder.forwardmodels Starting dump on esys.downunder.forwardmodels with ignore at ['__pycache__'] @@ -28827,10 +28840,36 @@ zeros Dump of esys.downunder.forwardmodels complete -------------esys.downunder.forwardmodels -..esys.downunder.forwardmodels.subsidence.pyc -..esys.downunder.forwardmodels.subsidence -esys.downunder.forwardmodels.subsidence -Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] +..esys.downunder.forwardmodels.magnetotelluric2d.pyc +..esys.downunder.forwardmodels.magnetotelluric2d +esys.downunder.forwardmodels.magnetotelluric2d +Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] + ForwardModel + MT2DBase + MT2DModelTEMode + MT2DModelTMMode + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + coords + division + escript + lpde + math + print_function +..esys.downunder.forwardmodels.base.pyc +..esys.downunder.forwardmodels.base +esys.downunder.forwardmodels.base +Starting dump on esys.downunder.forwardmodels.base with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX @@ -28838,12 +28877,11 @@ EPSILON FileWriter ForwardModel - FunctionOnBoundary + ForwardModelWithPotential L2 - LinearPDESystem + LinearSinglePDE Lsup NumpyToData - Subsidence __all__ __builtins__ __cached__ @@ -28926,6 +28964,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -28942,6 +28981,7 @@ negative nonsymmetric normalize + np numbers numpy os @@ -28986,26 +29026,49 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.pressure.pyc -..esys.downunder.forwardmodels.pressure -esys.downunder.forwardmodels.pressure -Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] +..esys.downunder.forwardmodels.acoustic.pyc +..esys.downunder.forwardmodels.acoustic +esys.downunder.forwardmodels.acoustic +Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] + AcousticWaveForm + ForwardModel + HAVE_DIRECT + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + edc + escript + lpde + np + print_function +..esys.downunder.forwardmodels.magnetic.pyc +..esys.downunder.forwardmodels.magnetic +esys.downunder.forwardmodels.magnetic +Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - Function - IsostaticPressure + ForwardModelWithPotential L2 - LinearSinglePDE Lsup + MagneticIntensityModel + MagneticModel NumpyToData - PI Scalar - U - Vector + SelfDemagnetizationModel __all__ __builtins__ __cached__ @@ -29088,7 +29151,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -29149,50 +29211,23 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetotelluric2d.pyc -..esys.downunder.forwardmodels.magnetotelluric2d -esys.downunder.forwardmodels.magnetotelluric2d -Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] - ForwardModel - MT2DBase - MT2DModelTEMode - MT2DModelTMMode - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - coords - division - escript - lpde - math - print_function -..esys.downunder.forwardmodels.magnetic.pyc -..esys.downunder.forwardmodels.magnetic -esys.downunder.forwardmodels.magnetic -Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] +..esys.downunder.forwardmodels.subsidence.pyc +..esys.downunder.forwardmodels.subsidence +esys.downunder.forwardmodels.subsidence +Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModelWithPotential + ForwardModel + FunctionOnBoundary L2 + LinearPDESystem Lsup - MagneticIntensityModel - MagneticModel NumpyToData - Scalar - SelfDemagnetizationModel + Subsidence __all__ __builtins__ __cached__ @@ -29335,23 +29370,25 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.gravity.pyc -..esys.downunder.forwardmodels.gravity -esys.downunder.forwardmodels.gravity -Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] +..esys.downunder.forwardmodels.dcresistivity.pyc +..esys.downunder.forwardmodels.dcresistivity +esys.downunder.forwardmodels.dcresistivity +Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data + DcRes + DiracDeltaFunctions EPSILON FileWriter - ForwardModelWithPotential - GravityModel + ForwardModel L2 + LinearPDE + Locator Lsup NumpyToData - PI - U + Scalar __all__ __builtins__ __cached__ @@ -29434,6 +29471,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -29494,25 +29532,26 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.dcresistivity.pyc -..esys.downunder.forwardmodels.dcresistivity -esys.downunder.forwardmodels.dcresistivity -Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] +..esys.downunder.forwardmodels.pressure.pyc +..esys.downunder.forwardmodels.pressure +esys.downunder.forwardmodels.pressure +Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data - DcRes - DiracDeltaFunctions EPSILON FileWriter - ForwardModel + Function + IsostaticPressure L2 - LinearPDE - Locator + LinearSinglePDE Lsup NumpyToData + PI Scalar + U + Vector __all__ __builtins__ __cached__ @@ -29656,22 +29695,23 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.base.pyc -..esys.downunder.forwardmodels.base -esys.downunder.forwardmodels.base -Starting dump on esys.downunder.forwardmodels.base with ignore at [] +..esys.downunder.forwardmodels.gravity.pyc +..esys.downunder.forwardmodels.gravity +esys.downunder.forwardmodels.gravity +Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModel ForwardModelWithPotential + GravityModel L2 - LinearSinglePDE Lsup NumpyToData + PI + U __all__ __builtins__ __cached__ @@ -29754,7 +29794,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -29771,7 +29810,6 @@ negative nonsymmetric normalize - np numbers numpy os @@ -29816,31 +29854,6 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.acoustic.pyc -..esys.downunder.forwardmodels.acoustic -esys.downunder.forwardmodels.acoustic -Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] - AcousticWaveForm - ForwardModel - HAVE_DIRECT - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - edc - escript - lpde - np - print_function Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/apps esys.downunder.apps Starting dump on esys.downunder.apps with ignore at [] @@ -30083,8 +30096,6 @@ whereZero zeros -------------esys.downunder.apps -..esys.downunder.apps.dcModels.pyc -..esys.downunder.apps.dcModels ..esys.downunder.apps.gravityModels.pyc ..esys.downunder.apps.gravityModels ..esys.downunder.apps.seismicModels.pyc @@ -30093,6 +30104,8 @@ ..esys.downunder.apps.magneticModels ..esys.downunder.apps.MTModels.pyc ..esys.downunder.apps.MTModels +..esys.downunder.apps.dcModels.pyc +..esys.downunder.apps.dcModels Running Sphinx v3.4.3 WARNING: html_static_path entry '_static' does not exist building [mo]: targets for 0 po files that are out of date @@ -30229,7 +30242,6 @@ RETURNS: -------- -/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int/esys.downunder.magtel2d.rst:29: WARNING: toctree contains reference to nonexisting document 'esys.downunder.magtel2d.mt1d' /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:2: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:7: WARNING: Inline emphasis start-string without end-string. @@ -30332,7 +30344,7 @@ copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done -build succeeded, 84 warnings. +build succeeded, 83 warnings. The HTML pages are in debian/stage3/release/doc/sphinx_api. scons: done building targets. @@ -30378,7 +30390,7 @@ [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options_mpi.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -30398,7 +30410,7 @@ Checking for C++ library siloh5... yes Checking for C++ library mpi_cxx... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-ima912td because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-ofpc2kli because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -35112,7 +35124,7 @@ rm -f utest.sh make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_auto_test -O-v - rm -fr -- /tmp/dh-xdg-rundir-N7x6NhNA + rm -fr -- /tmp/dh-xdg-rundir-0fODBGen create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary -v @@ -35159,22 +35171,22 @@ install -p -m0644 debian/copyright debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/copyright install -p -m0644 debian/copyright debian/python-escript-doc/usr/share/doc/python-escript-doc/copyright install -d debian/python-escript-doc/usr/share/doc-base/ + install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/escript-cookbook install -p -m0644 debian/python-escript-doc.doc-base.1 debian/python-escript-doc/usr/share/doc-base/escript-install-guide install -p -m0644 debian/python-escript-doc.doc-base.3 debian/python-escript-doc/usr/share/doc-base/escript-user-guide + install -p -m0644 debian/python-escript-doc.doc-base.6 debian/python-escript-doc/usr/share/doc-base/escript-python-api install -p -m0644 debian/python-escript-doc.doc-base.4 debian/python-escript-doc/usr/share/doc-base/escript-inversion-guide install -p -m0644 debian/python-escript-doc.doc-base.5 debian/python-escript-doc/usr/share/doc-base/escript-c\+\+-side - install -p -m0644 debian/python-escript-doc.doc-base.6 debian/python-escript-doc/usr/share/doc-base/escript-python-api - install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/escript-cookbook dh_sphinxdoc -O-v - ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js - (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.8)") > debian/python-escript-doc.substvars.new + ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js + (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 2.0)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars - (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8)") > debian/python-escript-doc.substvars.new + (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 2.0)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars @@ -35185,12 +35197,12 @@ debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/python-escript-5.6' dh_installchangelogs debian/changelog.trivial + install -p -m0644 debian/changelog debian/python3-escript/usr/share/doc/python3-escript/changelog.Debian + install -p -m0644 debian/changelog.trivial debian/python3-escript/usr/share/doc/python3-escript/changelog install -p -m0644 debian/changelog debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog install -p -m0644 debian/changelog debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog - install -p -m0644 debian/changelog debian/python3-escript/usr/share/doc/python3-escript/changelog.Debian - install -p -m0644 debian/changelog.trivial debian/python3-escript/usr/share/doc/python3-escript/changelog make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_installexamples -O-v dh_installexamples: warning: Cannot auto-detect main package for python-escript-doc. If the default is wrong, please use --doc-main-package @@ -35223,31 +35235,24 @@ install -p -m0644 debian/python-escript-doc.lintian-overrides debian/python-escript-doc/usr/share/lintian/overrides/python-escript-doc dh_perl -O-v dh_link -O-v - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js - ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js + ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js + ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js dh_strip_nondeterminism -O-v Using 1617812251 as canonical time Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/bdwn.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/bc_s.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01double_01_4.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01cplx__t_01_4.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1LinearSystem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Function.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/splitbar.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_a.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_off.png using File::StripNondeterminism::handlers::png @@ -35262,6 +35267,13 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/folderclosed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/doc.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/closed.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01double_01_4.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01cplx__t_01_4.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1LinearSystem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Function.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/splitbar.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1WeipaException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyNodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyElements.png using File::StripNondeterminism::handlers::png @@ -35269,13 +35281,6 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyNodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyElements.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1NodeData.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1ElementData.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1DomainChunk.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png @@ -35283,27 +35288,13 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Brick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1TransportProblem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1SystemMatrix.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1PasoException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1ValueError.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataAbstract.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AssertException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractTransportProblem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractSystemMatrix.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractContinuousDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1NodeData.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1ElementData.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1DomainChunk.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png @@ -35311,20 +35302,20 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1RipleyException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Rectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataConstant.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TransportProblemException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TestDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SystemMatrixException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SubWorld.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SplitWorldException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NullDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NotImplementedError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1TransportProblem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1SystemMatrix.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1PasoException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1ValueError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NonReducedVariable.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIScalarReducer.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIDataReducer.png using File::StripNondeterminism::handlers::png @@ -35332,6 +35323,27 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1FunctionSpaceException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1EsysException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DomainException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TransportProblemException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TestDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SystemMatrixException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SubWorld.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SplitWorldException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NullDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NotImplementedError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataConstant.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataAbstract.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AssertException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractTransportProblem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractSystemMatrix.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractContinuousDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/examples/escript_examples.tar.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/minus.png using File::StripNondeterminism::handlers::png @@ -35341,35 +35353,35 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_b.png using File::StripNondeterminism::handlers::png dh_compress -O-v cd debian/python3-escript - cd debian/python-escript-doc cd debian/python3-escript-mpi - chmod a-x usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 + cd debian/python-escript-doc chmod a-x usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 - gzip -9nf usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 + chmod a-x usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 gzip -9nf usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 + gzip -9nf usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 cd '/build/reproducible-path/python-escript-5.6' cd '/build/reproducible-path/python-escript-5.6' chmod a-x usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf gzip -9nf usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf cd '/build/reproducible-path/python-escript-5.6' dh_fixperms -O-v - find debian/python-escript-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript-mpi -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 + find debian/python-escript-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-escript-mpi ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript-mpi/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-escript-mpi/usr/share/man debian/python3-escript-mpi/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x + find debian/python3-escript -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x - find debian/python3-escript/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/python3-escript/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-escript-mpi/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/python3-escript/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-escript-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-escript-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-escript-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-escript-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 @@ -35405,13 +35417,13 @@ dh_dwz: warning: compressed debug information (#931891). rmdir -p --ignore-fail-on-non-empty debian/python3-escript-mpi/usr/lib/debug/.dwz/x86_64-linux-gnu dh_strip -a -O-v - install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15 - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ba/87e024e976667620dce8e51cff84f96b4e8171.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ba/87e024e976667620dce8e51cff84f96b4e8171.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ba/87e024e976667620dce8e51cff84f96b4e8171.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so + install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15 + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ba/87e024e976667620dce8e51cff84f96b4e8171.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libspeckley.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/80/5760c4d3b9a5fa4a9f3f4db060fd4d27e9a589.debug @@ -35436,7 +35448,13 @@ chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/aa/82f9e1ea172c8832828d94875225d2c7b4ff2d.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/aa/82f9e1ea172c8832828d94875225d2c7b4ff2d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libfinley.so + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/aa/82f9e1ea172c8832828d94875225d2c7b4ff2d.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libfinley.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so + install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16 + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libescriptreader.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/6c/56075081c83650838e7e15168df64663ade602.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/6c/56075081c83650838e7e15168df64663ade602.debug @@ -35454,15 +35472,9 @@ chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8d/8fb7384a1dd0448f95354e037e836b9a55938a.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8d/8fb7384a1dd0448f95354e037e836b9a55938a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libdudley.so - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8d/8fb7384a1dd0448f95354e037e836b9a55938a.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libdudley.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/15/3cb56aa4ae62f503287d276616c1d218078680.debug debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/af614f9c3a53e5198150ee16351a4e68784011.debug - install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16 - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/af614f9c3a53e5198150ee16351a4e68784011.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/af614f9c3a53e5198150ee16351a4e68784011.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so @@ -35478,9 +35490,15 @@ chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/1b/fcc16d3807717a2e386f657e9c9a8068ba4efd.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/1b/fcc16d3807717a2e386f657e9c9a8068ba4efd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/ripley/ripleycpp.so + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/1b/fcc16d3807717a2e386f657e9c9a8068ba4efd.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/ripley/ripleycpp.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/e8 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/finley/finleycpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/e8/d3ac30b6f93ff6cc2ba22b3c656d4ef5d3a619.debug + install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/0e + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libripley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/0e/46a9c761a5b6e3f631ff7f7b029f1bfa613200.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/e8/d3ac30b6f93ff6cc2ba22b3c656d4ef5d3a619.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/e8/d3ac30b6f93ff6cc2ba22b3c656d4ef5d3a619.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/finley/finleycpp.so @@ -35509,17 +35527,11 @@ chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/93/30883fd60e003a662c5d4ef8919105053ed72d.debug strip --remove-section=.comment --remove-section=.note debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/93/30883fd60e003a662c5d4ef8919105053ed72d.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/16/7f3770d42f8422f899b3ae31a8a4a33c00e1cd.debug debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/0e5165d7f8dbe0fee559da9fc68ab89847ddf6.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/0e5165d7f8dbe0fee559da9fc68ab89847ddf6.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/0e5165d7f8dbe0fee559da9fc68ab89847ddf6.debug strip --remove-section=.comment --remove-section=.note debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI - install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/0e - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libripley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/0e/46a9c761a5b6e3f631ff7f7b029f1bfa613200.debug objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/0e5165d7f8dbe0fee559da9fc68ab89847ddf6.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/share/doc ln -s python3-escript-mpi debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/share/doc/python3-escript-mpi-dbgsym @@ -35628,14 +35640,14 @@ echo misc:Depends= >> debian/python-escript-doc.substvars echo misc:Pre-Depends= >> debian/python-escript-doc.substvars dpkg-gencontrol -ppython-escript-doc -ldebian/changelog -Tdebian/python-escript-doc.substvars -Pdebian/python-escript-doc - echo misc:Depends= >> debian/python3-escript-mpi.substvars - echo misc:Pre-Depends= >> debian/python3-escript-mpi.substvars - install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN - dpkg-gencontrol -ppython3-escript-mpi -ldebian/changelog -Tdebian/python3-escript-mpi.substvars -Pdebian/.debhelper/python3-escript-mpi/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-escript-mpi-dbgsym "-DDepends=python3-escript-mpi (= \${binary:Version})" "-DDescription=debug symbols for python3-escript-mpi" "-DBuild-Ids=01c2995b171b9050e28a586b63c3b4b02d919919 1bfcc16d3807717a2e386f657e9c9a8068ba4efd 2739017fc185c7d477460a492256bd28ee936a2a 6877b1df490fd53e2c77ac428e51ce3169bf715a 6c56075081c83650838e7e15168df64663ade602 73af614f9c3a53e5198150ee16351a4e68784011 805760c4d3b9a5fa4a9f3f4db060fd4d27e9a589 8a0e5165d7f8dbe0fee559da9fc68ab89847ddf6 8d8fb7384a1dd0448f95354e037e836b9a55938a 9330883fd60e003a662c5d4ef8919105053ed72d 9502d6ce3f3df57a9fbe09e7bd2051343c35c458 9ffc6588b4314c9e5a24c8e355c0ba57e98a3530 a28e7b717419f9e99bda876e1fd4dc69908140b3 aa82f9e1ea172c8832828d94875225d2c7b4ff2d ba87e024e976667620dce8e51cff84f96b4e8171 e8d3ac30b6f93ff6cc2ba22b3c656d4ef5d3a619 fff579a7297c4e6148e8fba5523a50ca03df0079" -DSection=debug -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/python3-escript.substvars echo misc:Pre-Depends= >> debian/python3-escript.substvars install -d debian/.debhelper/python3-escript/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-escript -ldebian/changelog -Tdebian/python3-escript.substvars -Pdebian/.debhelper/python3-escript/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-escript-dbgsym "-DDepends=python3-escript (= \${binary:Version})" "-DDescription=debug symbols for python3-escript" "-DBuild-Ids=0e46a9c761a5b6e3f631ff7f7b029f1bfa613200 13360aec19e6925b1b16232a1c4a36ef5bc4788b 153cb56aa4ae62f503287d276616c1d218078680 167f3770d42f8422f899b3ae31a8a4a33c00e1cd 293bd6cc3ee6b586fb075faf3f45348f011c65c5 45e62f24badadb221dc7ca4ddf98f25632a89f60 83ad720eaeee4ed5dc04060ca41fb8143683149d 8ec01e882c236bc3b7ad645d27b8f7e3188f5834 afd051fb7592318e525b440a6bb17942c8dc674c b28d86fcd0eeb011d8b99dba9f97f1d11a65d939 b83e4026ded1df867fde4384fdc5a3fea3782554 bb5255f7b430be19f2d748af359cfbd8018ef3d5 f3885168e5d3aa759793aa94beabb7691593305f" -DSection=debug -UMulti-Arch -UReplaces -UBreaks + echo misc:Depends= >> debian/python3-escript-mpi.substvars + echo misc:Pre-Depends= >> debian/python3-escript-mpi.substvars + install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN + dpkg-gencontrol -ppython3-escript-mpi -ldebian/changelog -Tdebian/python3-escript-mpi.substvars -Pdebian/.debhelper/python3-escript-mpi/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-escript-mpi-dbgsym "-DDepends=python3-escript-mpi (= \${binary:Version})" "-DDescription=debug symbols for python3-escript-mpi" "-DBuild-Ids=01c2995b171b9050e28a586b63c3b4b02d919919 1bfcc16d3807717a2e386f657e9c9a8068ba4efd 2739017fc185c7d477460a492256bd28ee936a2a 6877b1df490fd53e2c77ac428e51ce3169bf715a 6c56075081c83650838e7e15168df64663ade602 73af614f9c3a53e5198150ee16351a4e68784011 805760c4d3b9a5fa4a9f3f4db060fd4d27e9a589 8a0e5165d7f8dbe0fee559da9fc68ab89847ddf6 8d8fb7384a1dd0448f95354e037e836b9a55938a 9330883fd60e003a662c5d4ef8919105053ed72d 9502d6ce3f3df57a9fbe09e7bd2051343c35c458 9ffc6588b4314c9e5a24c8e355c0ba57e98a3530 a28e7b717419f9e99bda876e1fd4dc69908140b3 aa82f9e1ea172c8832828d94875225d2c7b4ff2d ba87e024e976667620dce8e51cff84f96b4e8171 e8d3ac30b6f93ff6cc2ba22b3c656d4ef5d3a619 fff579a7297c4e6148e8fba5523a50ca03df0079" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-escript -ldebian/changelog -Tdebian/python3-escript.substvars -Pdebian/python3-escript @@ -35651,30 +35663,30 @@ chown 0:0 -- debian/python-escript-doc/DEBIAN/control dh_md5sums -O-v cd debian/python-escript-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/python3-escript >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-escript-mpi >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/python3-escript/DEBIAN/md5sums - chown 0:0 -- debian/python3-escript/DEBIAN/md5sums + cd debian/python3-escript >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-escript-mpi/DEBIAN/md5sums chown 0:0 -- debian/python3-escript-mpi/DEBIAN/md5sums - cd debian/.debhelper/python3-escript/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/.debhelper/python3-escript-mpi/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python-escript-doc/DEBIAN/md5sums chown 0:0 -- debian/python-escript-doc/DEBIAN/md5sums - cd debian/.debhelper/python3-escript-mpi/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + chmod 0644 -- debian/python3-escript/DEBIAN/md5sums + chown 0:0 -- debian/python3-escript/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums + cd debian/.debhelper/python3-escript/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums dh_builddeb -O-v - dpkg-deb --build debian/.debhelper/python3-escript-mpi/dbgsym-root .. dpkg-deb --build debian/python3-escript .. dpkg-deb --build debian/python-escript-doc .. +dpkg-deb: building package 'python3-escript' in '../python3-escript_5.6-3_amd64.deb'. dpkg-deb --build debian/.debhelper/python3-escript/dbgsym-root .. dpkg-deb --build debian/python3-escript-mpi .. + dpkg-deb --build debian/.debhelper/python3-escript-mpi/dbgsym-root .. dpkg-deb: building package 'python3-escript-mpi-dbgsym' in '../python3-escript-mpi-dbgsym_5.6-3_amd64.deb'. -dpkg-deb: building package 'python3-escript-dbgsym' in '../python3-escript-dbgsym_5.6-3_amd64.deb'. dpkg-deb: building package 'python-escript-doc' in '../python-escript-doc_5.6-3_all.deb'. -dpkg-deb: building package 'python3-escript' in '../python3-escript_5.6-3_amd64.deb'. +dpkg-deb: building package 'python3-escript-dbgsym' in '../python3-escript-dbgsym_5.6-3_amd64.deb'. dpkg-deb: building package 'python3-escript-mpi' in '../python3-escript-mpi_5.6-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-escript_5.6-3_amd64.changes @@ -35683,12 +35695,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3586001/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3526032 and its subdirectories -I: Current time: Sun Feb 9 21:34:59 -12 2025 -I: pbuilder-time-stamp: 1739180099 +I: removing directory /srv/workspace/pbuilder/3586001 and its subdirectories +I: Current time: Tue Jan 9 18:23:32 +14 2024 +I: pbuilder-time-stamp: 1704774212