Diff of the two buildlogs: -- --- b1/build.log 2024-07-06 14:59:54.727301985 +0000 +++ b2/build.log 2024-07-06 15:04:34.163441682 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jul 6 02:50:49 -12 2024 -I: pbuilder-time-stamp: 1720277449 +I: Current time: Sat Aug 9 11:22:56 +14 2025 +I: pbuilder-time-stamp: 1754688176 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./stimfit_0.16.0-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.18n9GAZz/trustedkeys.kbx': General error -gpgv: Signature made Wed Nov 27 06:16:51 2019 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.bBwXdK5w/trustedkeys.kbx': General error +gpgv: Signature made Thu Nov 28 08:16:51 2019 +14 gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./stimfit_0.16.0-1.dsc @@ -27,135 +27,166 @@ dpkg-source: info: unpacking stimfit_0.16.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3191944/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 9 11:23 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=42 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='a78cd5b836b04a9a91bdd707b2dd05f7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3191944' - PS1='# ' - PS2='> ' + INVOCATION_ID=fc8287b3ea524d8f83d54a4f6ee81b29 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3516344 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.s2XvAhV2/pbuilderrc_xUAZ --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.s2XvAhV2/b1 --logfile b1/build.log stimfit_0.16.0-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.s2XvAhV2/pbuilderrc_Be56 --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.s2XvAhV2/b2 --logfile b2/build.log stimfit_0.16.0-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-22-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.94-1 (2024-06-21) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Mar 27 22:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 69032 Mar 27 22:09 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Mar 27 22:09 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Mar 27 22:09 more - -rwsr-xr-x 1 root root 55528 Mar 27 22:09 mount - -rwxr-xr-x 1 root root 18664 Mar 27 22:09 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jun 6 21:27 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Mar 27 22:09 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Jan 19 21:59 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Mar 27 22:09 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Mar 27 22:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/3191944/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Mar 29 2024 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 69032 Mar 29 2024 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Mar 29 2024 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Mar 29 2024 more + -rwsr-xr-x 1 root root 55528 Mar 29 2024 mount + -rwxr-xr-x 1 root root 18664 Mar 29 2024 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Aug 9 11:23 sh -> /bin/bash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Mar 29 2024 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Jan 20 2024 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Mar 29 2024 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Mar 29 2024 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -508,7 +539,7 @@ Get: 281 http://deb.debian.org/debian bullseye/main amd64 python3-wxgtk4.0 amd64 4.0.7+dfsg-10 [6794 kB] Get: 282 http://deb.debian.org/debian bullseye/main amd64 swig4.0 amd64 4.0.2-1 [1377 kB] Get: 283 http://deb.debian.org/debian bullseye/main amd64 swig all 4.0.2-1 [330 kB] -Fetched 167 MB in 8s (20.4 MB/s) +Fetched 167 MB in 2s (84.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) @@ -1683,7 +1714,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/stimfit-0.16.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../stimfit_0.16.0-1_source.changes +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/stimfit-0.16.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../stimfit_0.16.0-1_source.changes dpkg-buildpackage: info: source package stimfit dpkg-buildpackage: info: source version 0.16.0-1 dpkg-buildpackage: info: source distribution unstable @@ -2134,27 +2169,34 @@ CC libbiosiglite_la-gdftime.lo CC libbiosiglite_la-mdc_ecg_codes.lo CC libbiosiglite_la-physicalunits.lo -biosig4c++/t210/sopen_alpha_read.c: In function 'sopen_alpha_read': -In file included from biosig4c++/t210/sopen_abf_read.c:32: +In file included from biosig4c++/t210/sopen_cfs_read.c:29: biosig4c++/t210/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); | ^~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/t210/../biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ -biosig4c++/t210/sopen_alpha_read.c:381:6: warning: implicit declaration of function 'FreeTextEvent' [-Wimplicit-function-declaration] - 381 | FreeTextEvent(hdr, n, t4); - | ^~~~~~~~~~~~~ -biosig4c++/t210/sopen_alpha_read.c:533:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] - 533 | hdr->FileName = FileName; - | ^ -In file included from biosig4c++/t210/sopen_cfs_read.c:29: +In file included from biosig4c++/biosig.c:65: +biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] + 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); + | ^~~~~~~~~~~~~~~~~~~~~~~~ +biosig4c++/biosig.h:533:19: note: declared here + 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ + | ^~~~~~~~~~~~~~~~~~~~~~~~ +In file included from biosig4c++/t210/sopen_abf_read.c:32: biosig4c++/t210/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); | ^~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/t210/../biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ +In file included from biosig4c++/biosig2.c:28: +biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] + 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); + | ^~~~~~~~~~~~~~~~~~~~~~~~ +biosig4c++/biosig.h:533:19: note: declared here + 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ + | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from biosig4c++/t210/sopen_heka_read.c:29: biosig4c++/t210/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); @@ -2169,11 +2211,6 @@ | | | | int size_t {aka long unsigned int} | %li -biosig4c++/t210/sopen_axg_read.c: In function 'sopen_axg_read': -biosig4c++/t210/sopen_axg_read.c:612:3: warning: implicit declaration of function 'strptime'; did you mean 'strftime'? [-Wimplicit-function-declaration] - 612 | strptime(strstr(Notes,"Created on ")+11, "%a %b %d %Y", &T); - | ^~~~~~~~ - | strftime In file included from biosig4c++/test0/sandbox.c:31: biosig4c++/test0/../biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); @@ -2181,13 +2218,10 @@ biosig4c++/test0/../biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ -In file included from biosig4c++/biosig2.c:28: -biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] - 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); - | ^~~~~~~~~~~~~~~~~~~~~~~~ -biosig4c++/biosig.h:533:19: note: declared here - 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ - | ^~~~~~~~~~~~~~~~~~~~~~~~ +biosig4c++/t210/sopen_alpha_read.c: In function 'sopen_alpha_read': +biosig4c++/t210/sopen_alpha_read.c:381:6: warning: implicit declaration of function 'FreeTextEvent' [-Wimplicit-function-declaration] + 381 | FreeTextEvent(hdr, n, t4); + | ^~~~~~~~~~~~~ biosig4c++/biosig2.c: In function 'biosig_set_patient_name_structured': biosig4c++/biosig2.c:428:38: warning: format '%f' expects argument of type 'double', but argument 3 has type 'const char *' [-Wformat=] 428 | fprintf(stderr,"Error in function %f: total length of name too large (%i > %i)\n",__func__,len1+len2+len3+2,MAX_LENGTH_NAME); @@ -2195,12 +2229,20 @@ | | | | double const char * | %s +biosig4c++/t210/sopen_alpha_read.c:533:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] + 533 | hdr->FileName = FileName; + | ^ +biosig4c++/t210/sopen_axg_read.c: In function 'sopen_axg_read': biosig4c++/biosig2.c:428:74: warning: format '%i' expects argument of type 'int', but argument 4 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] 428 | fprintf(stderr,"Error in function %f: total length of name too large (%i > %i)\n",__func__,len1+len2+len3+2,MAX_LENGTH_NAME); | ~^ ~~~~~~~~~~~~~~~~ | | | | int size_t {aka long unsigned int} | %li +biosig4c++/t210/sopen_axg_read.c:612:3: warning: implicit declaration of function 'strptime'; did you mean 'strftime'? [-Wimplicit-function-declaration] + 612 | strptime(strstr(Notes,"Created on ")+11, "%a %b %d %Y", &T); + | ^~~~~~~~ + | strftime biosig4c++/biosig2.c: At top level: biosig4c++/biosig2.c:841:56: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] 841 | int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot) { @@ -2209,13 +2251,6 @@ biosig4c++/biosig.h:533:19: note: declared here 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ | ^~~~~~~~~~~~~~~~~~~~~~~~ -In file included from biosig4c++/biosig.c:65: -biosig4c++/biosig.h:554:67: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] - 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); - | ^~~~~~~~~~~~~~~~~~~~~~~~ -biosig4c++/biosig.h:533:19: note: declared here - 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ - | ^~~~~~~~~~~~~~~~~~~~~~~~ biosig4c++/biosig.c: In function 'lcm': biosig4c++/biosig.c:362:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 362 | B4C_ERRNUM = B4C_UNSPECIFIC_ERROR; @@ -2229,11 +2264,6 @@ biosig4c++/biosig.c:97:24: note: declared here 97 | ATT_DEPREC const char *B4C_ERRMSG; | ^~~~~~~~~~ -biosig4c++/biosig.c: In function 'sopen_extended': -biosig4c++/biosig.c:11269:5: warning: implicit declaration of function 'strptime'; did you mean 'strftime'? [-Wimplicit-function-declaration] -11269 | strptime(val,"%d/%m/%Y %T",&T); - | ^~~~~~~~ - | strftime biosig4c++/t210/scp-decode.cpp: In function 'void ReadByte(t1&)': biosig4c++/t210/scp-decode.cpp:278:3: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 278 | B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; @@ -2543,9 +2573,6 @@ biosig4c++/t210/scp-decode.cpp:2071:4: warning: 'B4C_ERRMSG' is deprecated [-Wdeprecated-declarations] 2071 | B4C_ERRMSG = "SCP-DECODE: Not enough memory"; | ^~~~~~~~~~ -biosig4c++/biosig.c:7679:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 7679 | fread(buf,sz,1,fid); - | ^~~~~~~~~~~~~~~~~~~ biosig4c++/t210/scp-decode.cpp:118:49: note: declared here 118 | __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; | ^~~~~~~~~~ @@ -2635,6 +2662,11 @@ biosig4c++/t210/scp-decode.cpp:118:49: note: declared here 118 | __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; | ^~~~~~~~~~ +biosig4c++/biosig.c: In function 'sopen_extended': +biosig4c++/biosig.c:11269:5: warning: implicit declaration of function 'strptime'; did you mean 'strftime'? [-Wimplicit-function-declaration] +11269 | strptime(val,"%d/%m/%Y %T",&T); + | ^~~~~~~~ + | strftime In file included from biosig4c++/t210/scp-decode.cpp:126: biosig4c++/t210/codes.h: At global scope: biosig4c++/t210/codes.h:475:18: warning: 'type_statement' defined but not used [-Wunused-variable] @@ -2719,6 +2751,9 @@ biosig4c++/t210/codes.h:26:13: warning: 'STR_NULL' defined but not used [-Wunused-variable] 26 | static char STR_NULL[]=" unspecified/unknown "; | ^~~~~~~~ +biosig4c++/biosig.c:7679:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 7679 | fread(buf,sz,1,fid); + | ^~~~~~~~~~~~~~~~~~~ biosig4c++/biosig.c: In function 'getfiletype': biosig4c++/biosig.c:1634:12: warning: '__builtin_memcmp_eq' reading 11 bytes from a region of size 10 [-Wstringop-overflow=] 1634 | || !memcmp(hdr->AS.Header+307, "E\x00\x00\x00\x00\x00\x00\x00DAT", 11) @@ -2778,6 +2813,25 @@ CXX msbincvt.lo CXX unix.lo CXX abferror.lo + CXX axatffio32.lo + CXX fileio2.lo + CXX ProtocolReaderABF2.lo + CXX SimpleStringCache.lo + CXX abf2headr.lo + CXX atflib.lo + CXX axglib.lo + CXX AxoGraph_ReadWrite.lo + CXX fileUtils.lo + CXX stringUtils.lo + CXX byteswap.lo + CXX hekalib.lo + CXX igorlib.lo + CC CrossPlatformFileIO.lo + CC WriteWave.lo + CXX common.lo + CXX intanlib.lo + CXX streams.lo + CXX biosiglib.lo In file included from /usr/include/string.h:495, from ./abf/axon/Common/unix.cpp:2: In function 'char* strncpy(char*, const char*, size_t)', @@ -2816,6 +2870,38 @@ ./abf/axon/AxAbfFio32/abfheadr.h:560:8: note: 'struct ABFFileHeader' declared here 560 | struct ABFFileHeader // The total header length = 6144 bytes. | ^~~~~~~~~~~~~ +./abf/axon2/abf2headr.cpp: In function 'void ABF2H_Initialize(ABF2FileHeader*)': +./abf/axon2/abf2headr.cpp:29:34: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'struct ABF2FileHeader'; use assignment or value-initialization instead [-Wclass-memaccess] + 29 | memset(pFH, '\0', sizeof(*pFH)); + | ^ +In file included from ./abf/axon2/abf2headr.cpp:16: +./abf/axon2/abf2headr.h:612:8: note: 'struct ABF2FileHeader' declared here + 612 | struct ABF2FileHeader + | ^~~~~~~~~~~~~~ +In file included from /usr/include/string.h:495, + from /usr/include/memory.h:29, + from ./abf/axon2/../axon/Common/wincpp.hpp:23, + from ./abf/axon2/abf2headr.cpp:15: +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:77:14: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated copying 8 bytes from a string of length 10 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:99:14: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated copying 8 bytes from a string of length 10 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:76:14: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:98:14: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from /usr/include/memory.h:29, from ./abf/axon/AxAbfFio32/../Common/wincpp.hpp:23, @@ -2855,7 +2941,6 @@ /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - CXX axatffio32.lo ./recording.cpp: In constructor 'Recording::Recording()': ./recording.cpp:24:21: warning: 'Recording::time0' is deprecated [-Wdeprecated-declarations] 24 | : ChannelArray(0) @@ -3247,69 +3332,39 @@ ./././recording.h:393:17: note: declared here 393 | std::string time0, date; | ^~~~~ -In file included from /usr/include/string.h:495, - from /usr/include/memory.h:29, - from ./abf/axon/AxAbfFio32/../Common/wincpp.hpp:23, - from ./abf/axon/AxAbfFio32/Oldheadr.cpp:15: -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1831:11, - inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated before terminating nul copying 2 bytes from a string of the same length [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - CXX fileio2.lo - CXX ProtocolReaderABF2.lo - CXX SimpleStringCache.lo -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void GetOldDACUnits(char*, char*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:670:11, - inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1880:18, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 63 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1600:11, - inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 56 bytes from a string of length 76 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1659:11, - inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 31 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void GetOldDACUnits(char*, char*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:670:11, - inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1154:18, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 63 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1006:11, - inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 56 bytes from a string of length 76 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1064:14, - inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 159 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1087:11, - inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, - inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 31 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +./biosig/biosiglib.cpp:228:109: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 228 | sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); + | ^~~~~~~~ +./biosig/biosiglib.cpp:228:118: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 228 | sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); + | ^~~~~~~~ +In file included from ./biosig/../../libbiosiglite/biosig4c++/biosig2.h:25, + from ./biosig/biosiglib.cpp:22: +./biosig/../../libbiosiglite/biosig4c++/biosig.h:554:98: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] + 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); + | ^ +./biosig/../../libbiosiglite/biosig4c++/biosig.h:533:19: note: declared here + 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ + | ^~~~~~~~~~~~~~~~~~~~~~~~ +./biosig/biosiglib.cpp: In function 'bool stfio::exportBiosigFile(const string&, const Recording&, stfio::ProgressInfo&)': +./biosig/biosiglib.cpp:400:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] + 400 | for (k=0; k < biosig_get_number_of_channels(hdr); ++k) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/x86_64-linux-gnu/sys/types.h:176, + from /usr/include/stdlib.h:394, + from /usr/include/c++/10/cstdlib:75, + from /usr/include/c++/10/ext/string_conversions.h:41, + from /usr/include/c++/10/bits/basic_string.h:6545, + from /usr/include/c++/10/string:55, + from /usr/include/c++/10/bits/locale_classes.h:40, + from /usr/include/c++/10/bits/ios_base.h:41, + from /usr/include/c++/10/ios:42, + from /usr/include/c++/10/istream:38, + from /usr/include/c++/10/sstream:38, + from ./biosig/biosiglib.cpp:17: +./biosig/biosiglib.cpp:465:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] + 465 | val = htole64(*(uint64_t*)&d); + | ^~~~~~~~~~~~~ ./stfio.cpp: In function 'bool stfio::importFile(const string&, stfio::filetype, Recording&, const stfio::txtImportSettings&, stfio::ProgressInfo&)': ./stfio.cpp:215:17: warning: unused variable 'res' [-Wunused-variable] 215 | int res = stfio::importCFSFile(fName, ReturnData, progDlg); @@ -3373,86 +3428,66 @@ ./stfio.cpp:429:40: warning: catching polymorphic type 'const class std::out_of_range' by value [-Wcatch-value=] 429 | catch (const std::out_of_range e) { | ^ - CXX abf2headr.lo -./abf/axon2/abf2headr.cpp: In function 'void ABF2H_Initialize(ABF2FileHeader*)': -./abf/axon2/abf2headr.cpp:29:34: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'struct ABF2FileHeader'; use assignment or value-initialization instead [-Wclass-memaccess] - 29 | memset(pFH, '\0', sizeof(*pFH)); - | ^ -In file included from ./abf/axon2/abf2headr.cpp:16: -./abf/axon2/abf2headr.h:612:8: note: 'struct ABF2FileHeader' declared here - 612 | struct ABF2FileHeader - | ^~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from /usr/include/memory.h:29, - from ./abf/axon2/../axon/Common/wincpp.hpp:23, - from ./abf/axon2/abf2headr.cpp:15: + from ./abf/axon/AxAbfFio32/../Common/wincpp.hpp:23, + from ./abf/axon/AxAbfFio32/Oldheadr.cpp:15: In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:77:14: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated copying 8 bytes from a string of length 10 [-Wstringop-truncation] + inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1831:11, + inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated before terminating nul copying 2 bytes from a string of the same length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:99:14: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output truncated copying 8 bytes from a string of length 10 [-Wstringop-truncation] + inlined from 'void GetOldDACUnits(char*, char*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:670:11, + inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1880:18, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 63 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:76:14: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1600:11, + inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 56 bytes from a string of length 76 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void ABF2H_Initialize(ABF2FileHeader*)' at ./abf/axon2/abf2headr.cpp:98:14: -/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 12 [-Wstringop-truncation] + inlined from 'void ClampexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1659:11, + inlined from 'int ClampexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1922:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1965:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 31 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void GetOldDACUnits(char*, char*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:670:11, + inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1154:18, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 63 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1006:11, + inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 56 bytes from a string of length 76 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1064:14, + inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 10 bytes from a string of length 159 [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void FetchexToABF1_x(float*, char*, char*, char*, char*, ABFFileHeader*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1087:11, + inlined from 'BOOL FetchexConvert(FILEHANDLE, ABFFileHeader*, float*, char*, char*, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1195:19, + inlined from 'BOOL OLDH_ReadOldHeader(FILEHANDLE, UINT, int, ABFFileHeader*, int, int*)' at ./abf/axon/AxAbfFio32/Oldheadr.cpp:1963:29: +/usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' output may be truncated copying 8 bytes from a string of length 31 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - CXX atflib.lo - CXX axglib.lo - CXX AxoGraph_ReadWrite.lo - CXX fileUtils.lo - CXX stringUtils.lo - CXX byteswap.lo - CXX hekalib.lo - CXX igorlib.lo - CC CrossPlatformFileIO.lo - CC WriteWave.lo - CXX common.lo - CXX intanlib.lo - CXX streams.lo - CXX biosiglib.lo -./biosig/biosiglib.cpp:228:109: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 228 | sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); - | ^~~~~~~~ -./biosig/biosiglib.cpp:228:118: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 228 | sprintf(str,"v%i.%i.%i (compiled on %s %s)",BIOSIG_VERSION_MAJOR,BIOSIG_VERSION_MINOR,BIOSIG_PATCHLEVEL,__DATE__,__TIME__); - | ^~~~~~~~ -In file included from ./biosig/../../libbiosiglite/biosig4c++/biosig2.h:25, - from ./biosig/biosiglib.cpp:22: -./biosig/../../libbiosiglite/biosig4c++/biosig.h:554:98: warning: 'biosig_annotation_struct' is deprecated [-Wdeprecated-declarations] - 554 | ATT_DEPREC int biosig_get_annotation(int handle, size_t n, struct biosig_annotation_struct *annot); - | ^ -./biosig/../../libbiosiglite/biosig4c++/biosig.h:533:19: note: declared here - 533 | struct ATT_DEPREC biosig_annotation_struct { /* this structure is used for annotations */ - | ^~~~~~~~~~~~~~~~~~~~~~~~ -./biosig/biosiglib.cpp: In function 'bool stfio::exportBiosigFile(const string&, const Recording&, stfio::ProgressInfo&)': -./biosig/biosiglib.cpp:400:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] - 400 | for (k=0; k < biosig_get_number_of_channels(hdr); ++k) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/x86_64-linux-gnu/sys/types.h:176, - from /usr/include/stdlib.h:394, - from /usr/include/c++/10/cstdlib:75, - from /usr/include/c++/10/ext/string_conversions.h:41, - from /usr/include/c++/10/bits/basic_string.h:6545, - from /usr/include/c++/10/string:55, - from /usr/include/c++/10/bits/locale_classes.h:40, - from /usr/include/c++/10/bits/ios_base.h:41, - from /usr/include/c++/10/ios:42, - from /usr/include/c++/10/istream:38, - from /usr/include/c++/10/sstream:38, - from ./biosig/biosiglib.cpp:17: -./biosig/biosiglib.cpp:465:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] - 465 | val = htole64(*(uint64_t*)&d); - | ^~~~~~~~~~~~~ CXXLD libstfio.la make[4]: Leaving directory '/build/reproducible-path/stimfit-0.16.0/src/libstfio' Making all in libstfnum @@ -3488,13 +3523,6 @@ CXX libstimfit_la-fitseldlg.lo CXX libstimfit_la-smalldlgs.lo CXX libstimfit_la-usrdlg.lo -In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, - from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, - from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, - from ./gui/unopt.cpp:47: -/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] - 17 | #warning "Using deprecated NumPy API, disable it with " \ - | ^~~~~~~ ./gui/app.cpp:1437:30: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 1437 | verString << wxT(__DATE__) << wxT(", ") << wxT(__TIME__); | ^ @@ -3509,6 +3537,32 @@ /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ +In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, + from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, + from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, + from ./gui/unopt.cpp:47: +/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] + 17 | #warning "Using deprecated NumPy API, disable it with " \ + | ^~~~~~~ +./gui/unopt.cpp: In member function 'bool wxStfApp::Init_wxPython()': +./gui/unopt.cpp:178:24: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations] + 178 | PyEval_InitThreads(); + | ^ +In file included from /usr/include/python3.9/Python.h:145, + from ./gui/unopt.cpp:17: +/usr/include/python3.9/ceval.h:130:37: note: declared here + 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); + | ^~~~~~~~~~~~~~~~~~ +./gui/unopt.cpp: In member function 'new_wxwindow wxStfParentFrame::MakePythonWindow(const string&, const string&, const string&, bool, bool, bool, int, int, double, double)': +/usr/include/python3.9/ceval.h:24:66: warning: 'PyObject* PyEval_CallObjectWithKeywords(PyObject*, PyObject*, PyObject*)' is deprecated [-Wdeprecated-declarations] + 24 | PyEval_CallObjectWithKeywords(callable, arg, (PyObject *)NULL) + | ^ +./gui/unopt.cpp:483:14: note: in expansion of macro 'PyEval_CallObject' + 483 | result = PyEval_CallObject(func, argtuple); + | ^~~~~~~~~~~~~~~~~ +/usr/include/python3.9/ceval.h:17:43: note: declared here + 17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./gui/././../../libstfio/stfio.h:71, from ./gui/././../stf.h:80, from ./gui/./app.h:178, @@ -3593,40 +3647,21 @@ ./gui/doc.cpp:2332:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 2332 | if (*cit + eventl >= cursec().get().size()) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -./gui/unopt.cpp: In member function 'bool wxStfApp::Init_wxPython()': -./gui/unopt.cpp:178:24: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations] - 178 | PyEval_InitThreads(); - | ^ -In file included from /usr/include/python3.9/Python.h:145, - from ./gui/unopt.cpp:17: -/usr/include/python3.9/ceval.h:130:37: note: declared here - 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); - | ^~~~~~~~~~~~~~~~~~ -./gui/unopt.cpp: In member function 'new_wxwindow wxStfParentFrame::MakePythonWindow(const string&, const string&, const string&, bool, bool, bool, int, int, double, double)': -/usr/include/python3.9/ceval.h:24:66: warning: 'PyObject* PyEval_CallObjectWithKeywords(PyObject*, PyObject*, PyObject*)' is deprecated [-Wdeprecated-declarations] - 24 | PyEval_CallObjectWithKeywords(callable, arg, (PyObject *)NULL) - | ^ -./gui/unopt.cpp:483:14: note: in expansion of macro 'PyEval_CallObject' - 483 | result = PyEval_CallObject(func, argtuple); - | ^~~~~~~~~~~~~~~~~ -/usr/include/python3.9/ceval.h:17:43: note: declared here - 17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -./gui/graph.cpp: In member function 'void wxStfGraph::ChangeTrace(int)': -./gui/graph.cpp:2096:46: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 2096 | if (!sec_attr.eventList.empty() && trace != Doc()->GetCurSecIndex()) { - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, - from ./gui/./../../pystfio/pystfio.h:7, - from ./gui/doc.cpp:49: + from ./gui/unopt.cpp:47: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: 'int _import_array()' defined but not used [-Wunused-function] 1463 | _import_array(void) | ^~~~~~~~~~~~~ +./gui/graph.cpp: In member function 'void wxStfGraph::ChangeTrace(int)': +./gui/graph.cpp:2096:46: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 2096 | if (!sec_attr.eventList.empty() && trace != Doc()->GetCurSecIndex()) { + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, - from ./gui/unopt.cpp:47: + from ./gui/./../../pystfio/pystfio.h:7, + from ./gui/doc.cpp:49: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope: /usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: 'int _import_array()' defined but not used [-Wunused-function] 1463 | _import_array(void) @@ -3709,26 +3744,26 @@ CXX stimfittest-recording.o CXX stimfittest-fit.o CXX stimfittest-measure.o - CXX stimfittest-gtest_main.o CXX stimfittest-gtest-all.o -In file included from ./src/test/section.cpp:2: + CXX stimfittest-gtest_main.o +In file included from ./src/test/channel.cpp:2: ./src/test/gtest/include/gtest/gtest.h: In instantiation of 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int]': ./src/test/gtest/include/gtest/gtest.h:1484:23: required from 'static testing::AssertionResult testing::internal::EqHelper::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int; bool lhs_is_null_literal = false]' -./src/test/section.cpp:6:5: required from here +./src/test/channel.cpp:7:5: required from here ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ -In file included from ./src/test/channel.cpp:2: +In file included from ./src/test/recording.cpp:2: ./src/test/gtest/include/gtest/gtest.h: In instantiation of 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int]': ./src/test/gtest/include/gtest/gtest.h:1484:23: required from 'static testing::AssertionResult testing::internal::EqHelper::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int; bool lhs_is_null_literal = false]' -./src/test/channel.cpp:7:5: required from here +./src/test/recording.cpp:7:5: required from here ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ -In file included from ./src/test/recording.cpp:2: +In file included from ./src/test/section.cpp:2: ./src/test/gtest/include/gtest/gtest.h: In instantiation of 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int]': ./src/test/gtest/include/gtest/gtest.h:1484:23: required from 'static testing::AssertionResult testing::internal::EqHelper::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int; T2 = int; bool lhs_is_null_literal = false]' -./src/test/recording.cpp:7:5: required from here +./src/test/section.cpp:6:5: required from here ./src/test/gtest/include/gtest/gtest.h:1448:16: warning: comparison of integer expressions of different signedness: 'const long unsigned int' and 'const int' [-Wsign-compare] 1448 | if (expected == actual) { | ~~~~~~~~~^~~~~~~~~ @@ -3825,13 +3860,13 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libbiosiglite' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libbiosiglite.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.so libtool: install: /usr/bin/install -c .libs/libbiosiglite.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.la libtool: install: /usr/bin/install -c .libs/libbiosiglite.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libbiosiglite.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -3857,13 +3892,13 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libstfio' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfio.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.so libtool: install: /usr/bin/install -c .libs/libstfio.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.la libtool: install: /usr/bin/install -c .libs/libstfio.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfio.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -3889,13 +3924,13 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libstfnum' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: install: /usr/bin/install -c .libs/libstfnum.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.so libtool: install: /usr/bin/install -c .libs/libstfnum.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.la libtool: install: /usr/bin/install -c .libs/libstfnum.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstfnum.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -3921,15 +3956,15 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/stimfit' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstimfit.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstimfit.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libstimfit.la' -libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/stimfit; /bin/bash "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -Wl,-rpath,/usr/lib/stimfit -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libstimfit.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libstimfit_la-stf.lo libstimfit_la-app.lo libstimfit_la-unopt.lo libstimfit_la-doc.lo libstimfit_la-copygrid.lo libstimfit_la-graph.lo libstimfit_la-printout.lo libstimfit_la-parentframe.lo libstimfit_la-childframe.lo libstimfit_la-view.lo libstimfit_la-table.lo libstimfit_la-zoom.lo libstimfit_la-convertdlg.lo libstimfit_la-cursorsdlg.lo libstimfit_la-eventdlg.lo libstimfit_la-fitseldlg.lo libstimfit_la-smalldlgs.lo libstimfit_la-usrdlg.lo -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -lwx_gtk3u_aui-3.0 -lwx_baseu_net-3.0 ../libstfio/libstfio.la ../libstfnum/libstfnum.la ../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/stimfit; /bin/sh "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -Wl,-rpath,/usr/lib/stimfit -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libstimfit.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libstimfit_la-stf.lo libstimfit_la-app.lo libstimfit_la-unopt.lo libstimfit_la-doc.lo libstimfit_la-copygrid.lo libstimfit_la-graph.lo libstimfit_la-printout.lo libstimfit_la-parentframe.lo libstimfit_la-childframe.lo libstimfit_la-view.lo libstimfit_la-table.lo libstimfit_la-zoom.lo libstimfit_la-convertdlg.lo libstimfit_la-cursorsdlg.lo libstimfit_la-eventdlg.lo libstimfit_la-fitseldlg.lo libstimfit_la-smalldlgs.lo libstimfit_la-usrdlg.lo -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -lwx_gtk3u_aui-3.0 -lwx_baseu_net-3.0 ../libstfio/libstfio.la ../libstfnum/libstfnum.la ../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libstimfit.soT /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.so libtool: install: /usr/bin/install -c .libs/libstimfit.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.la libtool: install: /usr/bin/install -c .libs/libstimfit.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libstimfit.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -3955,15 +3990,15 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/stimfit/py' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' - /bin/bash ../../../libtool --mode=install /usr/bin/install -c libpystf.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' + /bin/sh ../../../libtool --mode=install /usr/bin/install -c libpystf.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: relinking 'libpystf.la' -libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/stimfit/py; /bin/bash "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -Wl,-rpath,/usr/lib/stimfit -avoid-version -lcholmod -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystf.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libpystf_la-pystf.lo libpystf_la-pystf_wrap.lo ../libstimfit.la ../../libstfio/libstfio.la -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -lwx_gtk3u_aui-3.0 -lwx_baseu_net-3.0 ../../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/stimfit/py; /bin/sh "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -I/usr/lib/x86_64-linux-gnu/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -Wl,-rpath,/usr/lib/stimfit -avoid-version -lcholmod -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystf.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit libpystf_la-pystf.lo libpystf_la-pystf_wrap.lo ../libstimfit.la ../../libstfio/libstfio.la -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -lwx_gtk3u_aui-3.0 -lwx_baseu_net-3.0 ../../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libpystf.soT /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.so libtool: install: /usr/bin/install -c .libs/libpystf.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.la libtool: install: /usr/bin/install -c .libs/libpystf.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit/libpystf.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4018,7 +4053,7 @@ make[3]: Entering directory '/build/reproducible-path/stimfit-0.16.0' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/bin' - /bin/bash ./libtool --mode=install /usr/bin/install -c stimfit '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/bin' + /bin/sh ./libtool --mode=install /usr/bin/install -c stimfit '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/bin' libtool: warning: './src/stimfit/libstimfit.la' has not been installed in '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfio/libstfio.la' has not been installed in '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' libtool: warning: './src/libstfnum/libstfnum.la' has not been installed in '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit' @@ -4026,8 +4061,8 @@ libtool: install: /usr/bin/install -c .libs/stimfit /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/bin/stimfit /usr/bin/make install-exec-hook make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0' -/bin/bash ./libtool --finish /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +/bin/sh ./libtool --finish /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/stimfit @@ -4294,7 +4329,7 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libbiosiglite' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libbiosiglite.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libbiosiglite.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libbiosiglite.so libtool: install: /usr/bin/install -c .libs/libbiosiglite.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libbiosiglite.la libtool: install: /usr/bin/install -c .libs/libbiosiglite.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libbiosiglite.a @@ -4308,7 +4343,7 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libstfio' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libstfio.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfio.so libtool: install: /usr/bin/install -c .libs/libstfio.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfio.la libtool: install: /usr/bin/install -c .libs/libstfio.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfio.a @@ -4322,7 +4357,7 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/libstfnum' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libstfnum.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' libtool: install: /usr/bin/install -c .libs/libstfnum.so /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfnum.so libtool: install: /usr/bin/install -c .libs/libstfnum.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfnum.la libtool: install: /usr/bin/install -c .libs/libstfnum.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libstfnum.a @@ -4336,15 +4371,15 @@ make[4]: Entering directory '/build/reproducible-path/stimfit-0.16.0/src/pystfio' make[4]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libpystfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libpystfio.la '/build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio' libtool: warning: relinking 'libpystfio.la' -libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/pystfio; /bin/bash "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystfio.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio libpystfio_la-pystfio.lo libpystfio_la-pystfio_wrap.lo ./../libstfio/libstfio.la ./../libstfnum/libstfnum.la ./../libbiosiglite/libbiosiglite.la ) +libtool: install: (cd /build/reproducible-path/stimfit-0.16.0/src/pystfio; /bin/sh "/build/reproducible-path/stimfit-0.16.0/libtool" --silent --tag CXX --mode=relink g++ -O2 -g -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/stimfit-0.16.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -L/usr/lib -lpython3.9 -avoid-version -Wl,-z,relro -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lhdf5_hl -o libpystfio.la -rpath /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio libpystfio_la-pystfio.lo libpystfio_la-pystfio_wrap.lo ./../libstfio/libstfio.la ./../libstfnum/libstfnum.la ./../libbiosiglite/libbiosiglite.la ) libtool: install: /usr/bin/install -c .libs/libpystfio.soT /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libpystfio.so libtool: install: /usr/bin/install -c .libs/libpystfio.lai /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libpystfio.la libtool: install: /usr/bin/install -c .libs/libpystfio.a /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libpystfio.a libtool: install: chmod 644 /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libpystfio.a libtool: install: ranlib /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio/libpystfio.a -libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio +libtool: finish: PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path:/sbin" ldconfig -n /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio ---------------------------------------------------------------------- Libraries have been installed in: /build/reproducible-path/stimfit-0.16.0/debian/tmp/usr/lib/python3.9/site-packages/stfio @@ -4415,12 +4450,12 @@ dh_testroot dh_installchangelogs -X./ChangeLog dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) - install -d debian/python3-stfio/usr/share/doc/python3-stfio - install -p -m0644 debian/changelog debian/python3-stfio/usr/share/doc/python3-stfio/changelog.Debian - install -d debian/stimfit-dbg/usr/share/doc/stimfit-dbg - install -p -m0644 debian/changelog debian/stimfit-dbg/usr/share/doc/stimfit-dbg/changelog.Debian install -d debian/stimfit/usr/share/doc/stimfit install -p -m0644 debian/changelog debian/stimfit/usr/share/doc/stimfit/changelog.Debian + install -d debian/stimfit-dbg/usr/share/doc/stimfit-dbg + install -p -m0644 debian/changelog debian/stimfit-dbg/usr/share/doc/stimfit-dbg/changelog.Debian + install -d debian/python3-stfio/usr/share/doc/python3-stfio + install -p -m0644 debian/changelog debian/python3-stfio/usr/share/doc/python3-stfio/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/.debhelper/generated/stimfit @@ -4482,11 +4517,11 @@ dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/python3-stfio chmod a-x usr/share/doc/stimfit/changelog.Debian usr/share/man/man1/stimfit.1 - chmod a-x usr/share/doc/python3-stfio/changelog.Debian chmod a-x usr/share/doc/stimfit-dbg/changelog.Debian + chmod a-x usr/share/doc/python3-stfio/changelog.Debian + gzip -9nf usr/share/doc/stimfit-dbg/changelog.Debian gzip -9nf usr/share/doc/stimfit/changelog.Debian usr/share/man/man1/stimfit.1 gzip -9nf usr/share/doc/python3-stfio/changelog.Debian - gzip -9nf usr/share/doc/stimfit-dbg/changelog.Debian cd '/build/reproducible-path/stimfit-0.16.0' cd '/build/reproducible-path/stimfit-0.16.0' cd '/build/reproducible-path/stimfit-0.16.0' @@ -4498,30 +4533,30 @@ chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/ef/c7366385ebe7d700ef68932a9b6e1de69b24fd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libbiosiglite.so objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/ef/c7366385ebe7d700ef68932a9b6e1de69b24fd.debug debian/stimfit/usr/lib/stimfit/libbiosiglite.so - install -d debian/stimfit-dbg/usr/lib/debug/.build-id/bb - objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libpystf.so debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug - chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug - chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libpystf.so - objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug debian/stimfit/usr/lib/stimfit/libpystf.so install -d debian/stimfit-dbg/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libstfio.so debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libstfio.so objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug debian/stimfit/usr/lib/stimfit/libstfio.so - install -d debian/stimfit-dbg/usr/lib/debug/.build-id/0c - objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libstfnum.so debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug - chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug - chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libstfnum.so - objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug debian/stimfit/usr/lib/stimfit/libstfnum.so install -d debian/stimfit-dbg/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libstimfit.so debian/stimfit-dbg/usr/lib/debug/.build-id/b7/b0aea5313ee9f0196b3c93a5b32e11454d5613.debug chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/b7/b0aea5313ee9f0196b3c93a5b32e11454d5613.debug chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/b7/b0aea5313ee9f0196b3c93a5b32e11454d5613.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libstimfit.so objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/b7/b0aea5313ee9f0196b3c93a5b32e11454d5613.debug debian/stimfit/usr/lib/stimfit/libstimfit.so + install -d debian/stimfit-dbg/usr/lib/debug/.build-id/bb + objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libpystf.so debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug + chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug + chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libpystf.so + objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/bb/a21d0bbd0713471d00b1b66b7cf09c5f6f51af.debug debian/stimfit/usr/lib/stimfit/libpystf.so + install -d debian/stimfit-dbg/usr/lib/debug/.build-id/0c + objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/lib/stimfit/libstfnum.so debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug + chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug + chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/stimfit/usr/lib/stimfit/libstfnum.so + objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug debian/stimfit/usr/lib/stimfit/libstfnum.so install -d debian/stimfit-dbg/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/stimfit/usr/bin/stimfit debian/stimfit-dbg/usr/lib/debug/.build-id/6d/eccfafb881ee61fabfb49cac1e0ac3f3375704.debug chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/6d/eccfafb881ee61fabfb49cac1e0ac3f3375704.debug @@ -4532,12 +4567,6 @@ chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/ef/c7366385ebe7d700ef68932a9b6e1de69b24fd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/libbiosiglite.so objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/ef/c7366385ebe7d700ef68932a9b6e1de69b24fd.debug debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/libbiosiglite.so - install -d debian/stimfit-dbg/usr/lib/debug/.build-id/85 - objcopy --only-keep-debug --compress-debug-sections debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug - chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug - chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so - objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/dc/f630a5a9ec6cdcd2aa4646beb93fadbf331820.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/libstfio.so @@ -4546,6 +4575,12 @@ chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/libstfnum.so objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/0c/10164ac20190ed7aec583badd75bd8734a5d0f.debug debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/libstfnum.so + install -d debian/stimfit-dbg/usr/lib/debug/.build-id/85 + objcopy --only-keep-debug --compress-debug-sections debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug + chmod 0644 -- debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug + chown 0:0 -- debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so + objcopy --add-gnu-debuglink debian/stimfit-dbg/usr/lib/debug/.build-id/85/39f5e9b30154d3447871230b42eac23eefa115.debug debian/python3-stfio/usr/lib/python3.9/site-packages/stfio/_stfio.so install -d debian/.debhelper/stimfit-dbg dh_fixperms find debian/stimfit -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 @@ -4579,14 +4614,14 @@ D: dh_python3 debhelper:152: source=stimfit, binary packages=['stimfit', 'python3-stfio'] D: dh_python3 dh_python3:183: processing package stimfit... D: dh_python3 tools:102: fix_shebang (debian/stimfit/usr/bin/stimfit): cannot parse binary file -D: dh_python3 fs:260: package stimfit details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {'/usr/lib/stimfit': {'ext_no_version': {'debian/stimfit/usr/lib/stimfit/libbiosiglite.so', 'debian/stimfit/usr/lib/stimfit/libstfio.so', 'debian/stimfit/usr/lib/stimfit/libstfnum.so', 'debian/stimfit/usr/lib/stimfit/libpystf.so', 'debian/stimfit/usr/lib/stimfit/_stf.so', 'debian/stimfit/usr/lib/stimfit/libstimfit.so'}, 'compile': True}}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} +D: dh_python3 fs:260: package stimfit details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {'/usr/lib/stimfit': {'ext_no_version': {'debian/stimfit/usr/lib/stimfit/libpystf.so', 'debian/stimfit/usr/lib/stimfit/libstfio.so', 'debian/stimfit/usr/lib/stimfit/libbiosiglite.so', 'debian/stimfit/usr/lib/stimfit/libstimfit.so', 'debian/stimfit/usr/lib/stimfit/_stf.so', 'debian/stimfit/usr/lib/stimfit/libstfnum.so'}, 'compile': True}}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package stimfit -D: dh_python3 depends:275: D={'python3 (<< 3.10)', 'python3:any', 'python3 (>= 3.9~)'}; R=[]; S=[]; E=[], B=[]; RT=[('/usr/lib/stimfit', '-V 3.9')] +D: dh_python3 depends:275: D={'python3 (<< 3.10)', 'python3 (>= 3.9~)', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[('/usr/lib/stimfit', '-V 3.9')] D: dh_python3 dh_python3:183: processing package python3-stfio... D: dh_python3 fs:49: moving files from debian/python3-stfio/usr/lib/python3.9/site-packages to debian/python3-stfio/usr/lib/python3/dist-packages/ D: dh_python3 fs:260: package python3-stfio details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-stfio -D: dh_python3 depends:275: D={'python3:any', 'python3 (>= 3~)', 'python3.9'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:275: D={'python3 (>= 3~)', 'python3:any', 'python3.9'}; R=[]; S=[]; E=[], B=[]; RT=[] [ -x /usr/bin/dh_numpy ] && dh_numpy || : dh_makeshlibs dh_makeshlibs: warning: Compatibility levels before 10 are deprecated (level 9 in use) @@ -4598,38 +4633,38 @@ dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -d debian/python3-stfio/DEBIAN - dpkg-shlibdeps -Tdebian/python3-stfio.substvars debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libbiosiglite.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/_stfio.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so + dpkg-shlibdeps -Tdebian/python3-stfio.substvars debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libbiosiglite.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so debian/python3-stfio/usr/lib/python3/dist-packages/stfio/_stfio.so install -d debian/stimfit/DEBIAN - dpkg-shlibdeps -Tdebian/stimfit.substvars debian/stimfit/usr/bin/stimfit debian/stimfit/usr/lib/stimfit/libbiosiglite.so debian/stimfit/usr/lib/stimfit/libpystf.so debian/stimfit/usr/lib/stimfit/libstfio.so debian/stimfit/usr/lib/stimfit/libstfnum.so debian/stimfit/usr/lib/stimfit/libstimfit.so + dpkg-shlibdeps -Tdebian/stimfit.substvars debian/stimfit/usr/bin/stimfit debian/stimfit/usr/lib/stimfit/libbiosiglite.so debian/stimfit/usr/lib/stimfit/libstfio.so debian/stimfit/usr/lib/stimfit/libstimfit.so debian/stimfit/usr/lib/stimfit/libpystf.so debian/stimfit/usr/lib/stimfit/libstfnum.so +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio12vec_scal_divERKSt6vectorIdSaIdEEd: it's probably a plugin +dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so contains an unresolvable reference to symbol lcm: it's probably a plugin +dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfio.so contains an unresolvable reference to symbol lcm: it's probably a plugin +dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio12vec_scal_divERKSt6vectorIdSaIdEEd: it's probably a plugin +dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-stfio/usr/lib/python3/dist-packages/stfio/_stfio.so was not linked against libbiosiglite.so (it uses none of the library's symbols) dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' -dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfio.so contains an unresolvable reference to symbol biosig_channel_set_scaling: it's probably a plugin -dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: debian/python3-stfio/usr/lib/python3/dist-packages/stfio/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio14vec_scal_minusERKSt6vectorIdSaIdEEd: it's probably a plugin -dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-stfio/usr/lib/python3/dist-packages/stfio/_stfio.so was not linked against libbiosiglite.so (it uses none of the library's symbols) -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libpystf.so contains an unresolvable reference to symbol _ZN6stfnum5lmFitERKSt6vectorIdSaIdEEdRKNS_10storedFuncES4_bRS2_RNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERi: it's probably a plugin +dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libpystf.so contains an unresolvable reference to symbol _ZN6stfnum5Table11SetColLabelEmRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfio.so contains an unresolvable reference to symbol biosig_get_application_specific_information: it's probably a plugin -dpkg-shlibdeps: warning: 50 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfio.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libstfnum.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libbiosiglite.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libstimfit.so' -dpkg-shlibdeps: warning: debian/stimfit/usr/lib/stimfit/libstfnum.so contains an unresolvable reference to symbol _ZN5stfio14vec_scal_minusERKSt6vectorIdSaIdEEd: it's probably a plugin -dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/stimfit/usr/lib/stimfit/libstimfit.so was not linked against libbiosiglite.so (it uses none of the library's symbols) dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) @@ -4658,22 +4693,22 @@ echo misc:Depends= >> debian/stimfit.substvars echo misc:Pre-Depends= >> debian/stimfit.substvars dpkg-gencontrol -pstimfit -ldebian/changelog -Tdebian/stimfit.substvars -Pdebian/stimfit - echo misc:Depends= >> debian/python3-stfio.substvars - echo misc:Pre-Depends= >> debian/python3-stfio.substvars - dpkg-gencontrol -ppython3-stfio -ldebian/changelog -Tdebian/python3-stfio.substvars -Pdebian/python3-stfio echo misc:Depends= >> debian/stimfit-dbg.substvars echo misc:Pre-Depends= >> debian/stimfit-dbg.substvars dpkg-gencontrol -pstimfit-dbg -ldebian/changelog -Tdebian/stimfit-dbg.substvars -Pdebian/stimfit-dbg "-DBuild-Ids=0c10164ac20190ed7aec583badd75bd8734a5d0f 6deccfafb881ee61fabfb49cac1e0ac3f3375704 8539f5e9b30154d3447871230b42eac23eefa115 b7b0aea5313ee9f0196b3c93a5b32e11454d5613 bba21d0bbd0713471d00b1b66b7cf09c5f6f51af dcf630a5a9ec6cdcd2aa4646beb93fadbf331820 efc7366385ebe7d700ef68932a9b6e1de69b24fd" + echo misc:Depends= >> debian/python3-stfio.substvars + echo misc:Pre-Depends= >> debian/python3-stfio.substvars + dpkg-gencontrol -ppython3-stfio -ldebian/changelog -Tdebian/python3-stfio.substvars -Pdebian/python3-stfio chmod 0644 -- debian/stimfit/DEBIAN/control chown 0:0 -- debian/stimfit/DEBIAN/control dpkg-gencontrol: warning: package python3-stfio: substitution variable ${python3:Versions} unused, but is defined - chmod 0644 -- debian/stimfit-dbg/DEBIAN/control - chown 0:0 -- debian/stimfit-dbg/DEBIAN/control chmod 0644 -- debian/python3-stfio/DEBIAN/control chown 0:0 -- debian/python3-stfio/DEBIAN/control + chmod 0644 -- debian/stimfit-dbg/DEBIAN/control + chown 0:0 -- debian/stimfit-dbg/DEBIAN/control dh_md5sums - cd debian/stimfit >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-stfio >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/stimfit >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/stimfit-dbg >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-stfio/DEBIAN/md5sums chown 0:0 -- debian/python3-stfio/DEBIAN/md5sums @@ -4683,10 +4718,10 @@ chown 0:0 -- debian/stimfit-dbg/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/stimfit .. - dpkg-deb --build debian/python3-stfio .. dpkg-deb --build debian/stimfit-dbg .. -dpkg-deb: building package 'stimfit-dbg' in '../stimfit-dbg_0.16.0-1_amd64.deb'. + dpkg-deb --build debian/python3-stfio .. dpkg-deb: building package 'stimfit' in '../stimfit_0.16.0-1_amd64.deb'. +dpkg-deb: building package 'stimfit-dbg' in '../stimfit-dbg_0.16.0-1_amd64.deb'. dpkg-deb: building package 'python3-stfio' in '../python3-stfio_0.16.0-1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../stimfit_0.16.0-1_amd64.changes @@ -4695,12 +4730,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3516344/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3191944 and its subdirectories -I: Current time: Sat Jul 6 02:59:54 -12 2024 -I: pbuilder-time-stamp: 1720277994 +I: removing directory /srv/workspace/pbuilder/3516344 and its subdirectories +I: Current time: Sat Aug 9 11:27:32 +14 2025 +I: pbuilder-time-stamp: 1754688452