Diff of the two buildlogs: -- --- b1/build.log 2024-01-06 15:00:35.338397874 +0000 +++ b2/build.log 2024-01-06 15:07:58.115841397 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Feb 7 09:10:04 -12 2025 -I: pbuilder-time-stamp: 1738962604 +I: Current time: Sun Jan 7 05:00:47 +14 2024 +I: pbuilder-time-stamp: 1704553247 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./liggghts_3.8.0+repack1-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.tlQc82Hf/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.uwe997fW/trustedkeys.kbx': General error gpgv: Signature made Fri Jun 26 21:26:37 2020 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key @@ -29,49 +29,80 @@ dpkg-source: info: applying 01_add_cmake_files.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2270930/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 6 15:00 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='c6a629df3c2b4fbe97e295fb48ffa11a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2270930' - PS1='# ' - PS2='> ' + INVOCATION_ID=20b9b21ea7c2460c84bbe906ff70bb75 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=380380 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ui1jUmeY/pbuilderrc_zA2w --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ui1jUmeY/b1 --logfile b1/build.log liggghts_3.8.0+repack1-7.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.104:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ui1jUmeY/pbuilderrc_tzBj --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ui1jUmeY/b2 --logfile b2/build.log liggghts_3.8.0+repack1-7.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.104:3128 I: uname -a - Linux codethink03-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash @@ -131,7 +162,7 @@ -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jan 8 15:47 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 6 15:00 sh -> /bin/bash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su @@ -157,7 +188,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/2270930/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -618,7 +649,7 @@ Get: 409 http://deb.debian.org/debian bullseye/main arm64 libxt-dev arm64 1:1.2.0-1 [406 kB] Get: 410 http://deb.debian.org/debian bullseye/main arm64 libvtk6-dev arm64 6.3.0+dfsg2-8.1 [1873 kB] Get: 411 http://deb.debian.org/debian bullseye/main arm64 mpi-default-bin arm64 1.13 [4672 B] -Fetched 226 MB in 2s (138 MB/s) +Fetched 226 MB in 2s (142 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) @@ -2297,7 +2328,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../liggghts_3.8.0+repack1-7_source.changes dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-7 dpkg-buildpackage: info: source distribution unstable @@ -2470,30 +2505,30 @@ make[3]: Leaving directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/reproducible-path/liggghts-3.8.0+repack1/debian/build' -[ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp -[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o +[ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o +[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_map.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp -[ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_full.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp -[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_line.cpp +[ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2513,8 +2548,8 @@ [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/atom_vec_tri.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/bond.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bond.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bond.cpp @@ -2526,8 +2561,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/bounding_box.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 200 | fread(&k[1],sizeof(double),atom->nbondtypes,fp); @@ -2535,6 +2568,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 201 | fread(&r0[1],sizeof(double),atom->nbondtypes,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 351 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2545,18 +2582,16 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 363 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp +[ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp -[ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/citeme.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_atom_molecule.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o @@ -2603,9 +2638,9 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_multisphere.cpp -[ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o +[ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_msd.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp @@ -2627,10 +2662,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rdf.cpp -[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce.cpp +[ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_rigid.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o @@ -2641,10 +2676,10 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/compute_temp.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/compute_temp.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/contact_models.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/contact_models.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/contact_models.cpp -[ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/create_atoms.cpp.o [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/container_base.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/create_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/create_atoms.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/container_base.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/container_base.cpp +[ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/create_atoms.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/create_atoms.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/create_atoms.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/create_box.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/create_box.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/create_box.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o @@ -2663,8 +2698,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/domain.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/domain.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/dump.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump.cpp -[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -2675,6 +2708,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 364 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_custom.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o @@ -2705,18 +2740,18 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_movie.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_particle.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_particle.cpp -[ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_xyz.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_vtk.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_vtk.cpp +[ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_xyz.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/dump_xyz.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/error.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/error.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/error.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/finish.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/finish.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/finish.cpp -[ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_adapt.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix.cpp +[ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_adapt.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_addforce.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_addforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_addforce.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o @@ -2729,18 +2764,12 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp -[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 520 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp -[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp +[ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 848 | ftruncate(fileno(fp),fileend); @@ -2749,16 +2778,22 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 917 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_aveforce.cpp +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp +[ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_box_relax.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp -[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 670 | ftruncate(fileno(fp),fileend); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o @@ -2773,10 +2808,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp -[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined 63 | #define BIG 1000000. | @@ -2790,10 +2821,12 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition 60 | #define BIG 1.0e20 | +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp +[ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp -[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:40: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 75 | sprintf(sourceName_, "%sSource",speciesName_); @@ -2879,6 +2912,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/fix_deform.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o @@ -3051,8 +3086,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/improper.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/improper.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 569 | if (me == 0) fread(&ngroup,sizeof(int),1,fp); @@ -3063,10 +3096,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 585 | if (me == 0) fread(names[i],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp +[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/info.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 340 | if (me == 0) fread(&nstyles,sizeof(int),1,fp); @@ -3077,10 +3108,20 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | if (me == 0) fread(keywords[m],sizeof(char),n,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp +[ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/input_multisphere.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp +[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp +[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1124 | chdir(arg[1]); @@ -3088,12 +3129,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | if (me == 0) system(work); | ~~~~~~^~~~~~ -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/integrate.cpp -[ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/irregular.cpp -[ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/kspace.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/lammps.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o @@ -3171,8 +3206,6 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_dummy.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_full.cpp -[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1197 | if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); @@ -3213,6 +3246,8 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1264 | if (me == 0) fread(&n,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ +[ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_gran.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o @@ -3234,9 +3269,9 @@ [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_hybrid.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o @@ -3259,6 +3294,22 @@ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': +/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 99 | fread(&selected, sizeof(int64_t), 1, fp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp +[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 282 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -3276,18 +3327,12 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | fread(&mix_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph.cpp -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': -/build/reproducible-path/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 99 | fread(&selected, sizeof(int64_t), 1, fp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp -[ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp +[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/random.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 300 | if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); @@ -3299,16 +3344,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 323 | fread(&tensCorr_flag,sizeof(int),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp -[ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/procmap.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/properties.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/property_registry.cpp -[ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/random.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_mars.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/random_mars.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/random_mars.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_park.cpp.o @@ -3326,11 +3361,7 @@ [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/reader_xyz.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/reader_xyz.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region.cpp.o -[ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region_block.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region_block.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_block.cpp cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region.cpp -[ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cone.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cone.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)': /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 863 | fread(buf,sizeof(int),n,fp); @@ -3362,6 +3393,10 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 948 | fread(&value,sizeof(bigint),1,fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region_block.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region_block.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_block.cpp +[ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cone.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cone.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/region_cylinder.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/region_cylinder.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o @@ -3396,6 +3431,8 @@ cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/signal_handling.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/sort_buffer.cpp +[ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o +cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::int_handler(int)': /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | write(STDOUT_FILENO, warning.c_str(), len); @@ -3410,8 +3447,6 @@ /build/reproducible-path/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 108 | write(STDOUT_FILENO, warning.c_str(), len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o -cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/special.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o cd /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/reproducible-path/liggghts-3.8.0+repack1 -I/build/reproducible-path/liggghts-3.8.0+repack1/src -isystem /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/aarch64-linux-gnu/openmpi/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -pthread -fPIC -pthread -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/reproducible-path/liggghts-3.8.0+repack1/src/superquadric.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o @@ -3474,14 +3509,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 --allow-run-as-root --oversubscribe /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-07-21:10:55 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-06-15:02:27 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Fri Feb 7 21:18:09 2025 +Setting up run at Sat Jan 6 15:06:25 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3490,37 +3525,37 @@ 0 0 0 0 0 0.0015 insertion: proc 1 at 0 % insertion: proc 1 at 10 % -insertion: proc 0 at 0 % insertion: proc 1 at 20 % -insertion: proc 1 at 30 % -insertion: proc 1 at 40 % -insertion: proc 1 at 50 % -insertion: proc 1 at 60 % -insertion: proc 1 at 70 % +insertion: proc 0 at 0 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % -insertion: proc 1 at 80 % insertion: proc 0 at 30 % +insertion: proc 1 at 30 % +insertion: proc 1 at 40 % insertion: proc 0 at 40 % -insertion: proc 1 at 90 % insertion: proc 0 at 50 % +insertion: proc 1 at 50 % insertion: proc 0 at 60 % +insertion: proc 1 at 60 % +insertion: proc 1 at 70 % insertion: proc 0 at 70 % +insertion: proc 1 at 80 % insertion: proc 0 at 80 % -insertion: proc 1 at 100 % +insertion: proc 1 at 90 % insertion: proc 0 at 90 % +insertion: proc 1 at 100 % insertion: proc 0 at 100 % INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 -Loop time of 0.0516444 on 2 procs for 1 steps with 889 atoms, finish time Fri Feb 7 21:18:09 2025 +Loop time of 0.0158134 on 2 procs for 1 steps with 889 atoms, finish time Sat Jan 6 15:06:25 2024 -Pair time (%) = 1.696e-05 (0.03284) -Neigh time (%) = 0.00026354 (0.510298) -Comm time (%) = 0.00017282 (0.334635) -Outpt time (%) = 0.00010126 (0.196072) -Other time (%) = 0.0510898 (98.9262) +Pair time (%) = 2.528e-05 (0.159864) +Neigh time (%) = 0.000397183 (2.51169) +Comm time (%) = 0.000229321 (1.45017) +Outpt time (%) = 4.406e-05 (0.278624) +Other time (%) = 0.0151176 (95.5997) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3533,7 +3568,7 @@ Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Fri Feb 7 21:18:09 2025 +Setting up run at Sat Jan 6 15:06:25 2024 Memory usage per processor = 8.42521 Mbytes Step Atoms KinEng rke heattran Volume @@ -3558,14 +3593,14 @@ 18000 889 2.828439e-05 9.4809317e-06 5719.8098 0.0015 19000 889 7.9254112e-06 6.4837167e-06 5719.8098 0.0015 20000 889 1.7544164e-06 2.2838494e-06 5719.8098 0.0015 -Loop time of 43.2113 on 2 procs for 19999 steps with 889 atoms, finish time Fri Feb 7 21:18:53 2025 +Loop time of 6.86191 on 2 procs for 19999 steps with 889 atoms, finish time Sat Jan 6 15:06:32 2024 -Pair time (%) = 6.12858 (14.1828) -Neigh time (%) = 0.124213 (0.287455) -Comm time (%) = 8.49244 (19.6533) -Outpt time (%) = 0.40051 (0.926864) -Other time (%) = 28.0656 (64.9496) +Pair time (%) = 2.20125 (32.0793) +Neigh time (%) = 0.0449796 (0.655496) +Comm time (%) = 0.642366 (9.36132) +Outpt time (%) = 0.0855778 (1.24714) +Other time (%) = 3.88774 (56.6568) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3580,7 +3615,7 @@ Dangerous builds = 0 Setting atom values ... 441 settings made for property/atom -Setting up run at Fri Feb 7 21:18:53 2025 +Setting up run at Sat Jan 6 15:06:32 2024 Memory usage per processor = 8.72219 Mbytes Step Atoms KinEng rke heattran Volume @@ -3615,14 +3650,14 @@ 48000 889 4.0459585e-09 1.8537788e-08 10448.786 0.0015 49000 889 4.0306485e-09 1.8509371e-08 10448.786 0.0015 50000 889 9.4020124e-10 1.643735e-08 10448.786 0.0015 -Loop time of 62.4294 on 2 procs for 30000 steps with 889 atoms, finish time Fri Feb 7 21:19:55 2025 +Loop time of 12.2829 on 2 procs for 30000 steps with 889 atoms, finish time Sat Jan 6 15:06:44 2024 -Pair time (%) = 9.54076 (15.2825) -Neigh time (%) = 0.00028844 (0.000462026) -Comm time (%) = 0.0361188 (0.0578554) -Outpt time (%) = 0.558416 (0.894476) -Other time (%) = 52.2939 (83.7647) +Pair time (%) = 4.00784 (32.6293) +Neigh time (%) = 0.000277021 (0.00225534) +Comm time (%) = 0.00986137 (0.0802852) +Outpt time (%) = 0.135129 (1.10014) +Other time (%) = 8.12982 (66.188) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 @@ -3639,14 +3674,14 @@ mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; /build/reproducible-path/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2025-02-07-21:10:55 by pbuilder1, git commit unknown) +LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2024-01-06-15:02:27 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 1 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% -Setting up run at Fri Feb 7 21:19:55 2025 +Setting up run at Sat Jan 6 15:06:44 2024 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps @@ -3666,14 +3701,14 @@ INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 -Loop time of 0.0185377 on 1 procs for 1 steps with 890 atoms, finish time Fri Feb 7 21:19:55 2025 +Loop time of 0.0218561 on 1 procs for 1 steps with 890 atoms, finish time Sat Jan 6 15:06:44 2024 -Pair time (%) = 2.972e-05 (0.160322) -Neigh time (%) = 0.00047464 (2.5604) -Comm time (%) = 7.6e-06 (0.0409975) -Outpt time (%) = 2.468e-05 (0.133134) -Other time (%) = 0.0180011 (97.1051) +Pair time (%) = 4.9321e-05 (0.225663) +Neigh time (%) = 0.000794404 (3.6347) +Comm time (%) = 1.096e-05 (0.0501462) +Outpt time (%) = 3.492e-05 (0.159772) +Other time (%) = 0.0209665 (95.9297) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3686,7 +3721,7 @@ Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 -Setting up run at Fri Feb 7 21:19:55 2025 +Setting up run at Sat Jan 6 15:06:44 2024 Memory usage per processor = 8.46413 Mbytes Step Atoms KinEng rke heattran Volume @@ -3711,14 +3746,14 @@ 18000 890 1.3925821e-05 4.7644174e-06 5726.2438 0.0015 19000 890 4.3372121e-06 4.2534528e-06 5726.2438 0.0015 20000 890 7.1389472e-06 4.4068917e-06 5726.2438 0.0015 -Loop time of 23.288 on 1 procs for 19999 steps with 890 atoms, finish time Fri Feb 7 21:20:19 2025 +Loop time of 6.79331 on 1 procs for 19999 steps with 890 atoms, finish time Sat Jan 6 15:06:51 2024 -Pair time (%) = 15.5205 (66.6461) -Neigh time (%) = 0.303459 (1.30307) -Comm time (%) = 0.02164 (0.0929236) -Outpt time (%) = 0.350897 (1.50677) -Other time (%) = 7.09146 (30.4511) +Pair time (%) = 4.35641 (64.1278) +Neigh time (%) = 0.0845212 (1.24418) +Comm time (%) = 0.00684385 (0.100744) +Outpt time (%) = 0.126912 (1.86819) +Other time (%) = 2.21863 (32.6591) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -3733,7 +3768,7 @@ Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom -Setting up run at Fri Feb 7 21:20:19 2025 +Setting up run at Sat Jan 6 15:06:51 2024 Memory usage per processor = 8.75284 Mbytes Step Atoms KinEng rke heattran Volume @@ -3768,14 +3803,14 @@ 48000 890 9.0021716e-09 2.6556003e-08 10498.114 0.0015 49000 890 8.9759627e-09 2.6538113e-08 10498.114 0.0015 50000 890 5.7130038e-09 2.0490232e-08 10498.114 0.0015 -Loop time of 34.096 on 1 procs for 30000 steps with 890 atoms, finish time Fri Feb 7 21:20:53 2025 +Loop time of 12.0805 on 1 procs for 30000 steps with 890 atoms, finish time Sat Jan 6 15:07:03 2024 -Pair time (%) = 23.5458 (69.0575) -Neigh time (%) = 0.00055952 (0.00164101) -Comm time (%) = 0.0136108 (0.039919) -Outpt time (%) = 0.551703 (1.61809) -Other time (%) = 9.98429 (29.2829) +Pair time (%) = 7.95961 (65.8883) +Neigh time (%) = 0.000568283 (0.00470415) +Comm time (%) = 0.00557934 (0.0461849) +Outpt time (%) = 0.20189 (1.67121) +Other time (%) = 3.91281 (32.3896) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 @@ -4327,12 +4362,12 @@ dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/reproducible-path/liggghts-3.8.0\+repack1/debian/build -dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-7_arm64.deb'. -dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-7_arm64.deb'. dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-7_arm64.deb'. -dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-7_arm64.deb'. -dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-7_all.deb'. +dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-7_arm64.deb'. dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-7_arm64.deb'. +dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-7_all.deb'. +dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-7_arm64.deb'. +dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-7_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../liggghts_3.8.0+repack1-7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4340,12 +4375,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/380380/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2270930 and its subdirectories -I: Current time: Fri Feb 7 09:23:33 -12 2025 -I: pbuilder-time-stamp: 1738963413 +I: removing directory /srv/workspace/pbuilder/380380 and its subdirectories +I: Current time: Sun Jan 7 05:07:56 +14 2024 +I: pbuilder-time-stamp: 1704553676