Diff of the two buildlogs: -- --- b1/build.log 2024-01-06 23:02:19.912123374 +0000 +++ b2/build.log 2024-01-06 23:18:30.578689355 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jan 6 10:56:06 -12 2024 -I: pbuilder-time-stamp: 1704581766 +I: Current time: Sun Jan 7 13:02:42 +14 2024 +I: pbuilder-time-stamp: 1704582162 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./sasview_5.0.3-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.G6yEEzYZ/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.E8wznk73/trustedkeys.kbx': General error gpgv: Signature made Sat Jan 30 05:07:13 2021 gpgv: using RSA key 90E2D2C1AD146A1B7EBB891DBBC17EBB1396F2F7 gpgv: Can't check signature: No public key @@ -35,49 +35,80 @@ dpkg-source: info: applying fix_h5py_value_PR1712.diff I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2706782/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 6 23:03 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='3b03bf2c9dac4d54868d2cf887b62180' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2706782' - PS1='# ' - PS2='> ' + INVOCATION_ID=19b5bd06f95e4f2b9c31e34fdf846b99 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2876378 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lRqzy5YF/pbuilderrc_SdFF --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lRqzy5YF/b1 --logfile b1/build.log sasview_5.0.3-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.104:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lRqzy5YF/pbuilderrc_LLxg --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lRqzy5YF/b2 --logfile b2/build.log sasview_5.0.3-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.104:3128 I: uname -a - Linux codethink04-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash @@ -137,7 +168,7 @@ -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 7 09:23 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 6 23:03 sh -> /bin/bash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su @@ -163,7 +194,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/2706782/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -655,7 +686,7 @@ Get: 382 http://deb.debian.org/debian bullseye/main arm64 xserver-common all 2:1.20.11-1+deb11u6 [2284 kB] Get: 383 http://deb.debian.org/debian bullseye/main arm64 xserver-xephyr arm64 2:1.20.11-1+deb11u6 [3110 kB] Get: 384 http://deb.debian.org/debian bullseye/main arm64 xvfb arm64 2:1.20.11-1+deb11u6 [2987 kB] -Fetched 297 MB in 2s (121 MB/s) +Fetched 297 MB in 5s (58.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) @@ -1870,8 +1901,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Sat Jan 6 22:57:10 UTC 2024. -Universal Time is now: Sat Jan 6 22:57:10 UTC 2024. +Local time is now: Sat Jan 6 23:06:02 UTC 2024. +Universal Time is now: Sat Jan 6 23:06:02 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libcap2-bin (1:2.44-1) ... @@ -2271,7 +2302,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/sasview-5.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../sasview_5.0.3-3_source.changes +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/sasview-5.0.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../sasview_5.0.3-3_source.changes dpkg-buildpackage: info: source package sasview dpkg-buildpackage: info: source version 5.0.3-3 dpkg-buildpackage: info: source distribution unstable @@ -3798,7 +3833,7 @@ reading sources... [ 14%] dev/sasview-api/sas.qtgui.Plotting.UI reading sources... [ 15%] dev/sasview-api/sas.qtgui.UI reading sources... [ 16%] dev/sasview-api/sas.qtgui.UnitTesting -QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-pbuilder1' +QStandardPaths: XDG_RUNTIME_DIR not set, defaulting to '/tmp/runtime-pbuilder2' reading sources... [ 16%] dev/sasview-api/sas.qtgui.Utilities reading sources... [ 17%] dev/sasview-api/sas.sascalc reading sources... [ 17%] dev/sasview-api/sas.sascalc.calculator @@ -50676,7 +50711,7 @@ return np.asscalar(pr_val) -- Docs: https://docs.pytest.org/en/stable/warnings.html -======================= 165 passed, 6 warnings in 6.10s ======================== +======================= 165 passed, 6 warnings in 14.17s ======================= # Run some additional GUI tests # they fail upstream at present so run them without failing the build PYBUILD_SYSTEM=custom \ @@ -50726,7 +50761,9 @@ WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl -.WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl +.ERROR:sas.qtgui.Perspectives.Inversion.InversionPerspective:EstimatePr2.compute: cannot import name 'NTermEstimator' from partially initialized module 'sas.sascalc.pr.num_term' (most likely due to a circular import) (/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/sascalc/pr/num_term.py) +ERROR:sas.qtgui.Perspectives.Inversion.InversionPerspective:EstimatePr2.compute: cannot import name 'NTermEstimator' from partially initialized module 'sas.sascalc.pr.num_term' (most likely due to a circular import) (/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/sascalc/pr/num_term.py) +WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl @@ -50773,7 +50810,7 @@ .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl .WARNING:sas.qtgui.Perspectives.Fitting.GPUOptions:Unable to import the pyopencl package. It may not have been installed. If you wish to use OpenCL, try running pip install --user pyopencl -....ERROR:sas.sascalc.data_util.calcthread:Traceback (most recent call last): +...............ERROR:sas.sascalc.data_util.calcthread:Traceback (most recent call last): File "/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/sascalc/data_util/calcthread.py", line 269, in _run self.compute(*args, **kwargs) File "/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/qtgui/Perspectives/Fitting/ModelThread.py", line 269, in compute @@ -50791,7 +50828,7 @@ self.Calc1DFinishedSignal.emit(return_data) RuntimeError: wrapped C/C++ object of type FittingWidget has been deleted -...............................................................ERROR:sas.qtgui.Perspectives.Fitting.FittingWidget:Traceback (most recent call last): +....................................................ERROR:sas.qtgui.Perspectives.Fitting.FittingWidget:Traceback (most recent call last): File "/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/qtgui/Perspectives/Fitting/FittingOptions.py", line 149, in onAlgorithmChange self.updateWidgetFromBumps(self.current_fitter_id) File "/build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/sas/qtgui/Perspectives/Fitting/FittingOptions.py", line 260, in updateWidgetFromBumps @@ -50844,7 +50881,7 @@ if not np.any(np.isfinite(xys)): TypeError: ufunc 'isfinite' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe'' -F.EEEEE......F.Segmentation fault +F.EEEEE......F./usr/bin/xvfb-run: line 184: 3015517 Segmentation fault DISPLAY=:$SERVERNUM XAUTHORITY=$AUTHFILE "$@" E: pybuild pybuild:353: test: plugin custom failed with: exit code=139: cd /build/reproducible-path/sasview-5.0.3/.pybuild/cpython3_3.9_sasview/build/qtgui; xvfb-run -a --server-args='-screen 0 1024x768x24' python3 GUITests.py dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 returned exit code 13 make[1]: Leaving directory '/build/reproducible-path/sasview-5.0.3' @@ -54152,12 +54189,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2876378/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2706782 and its subdirectories -I: Current time: Sat Jan 6 11:02:18 -12 2024 -I: pbuilder-time-stamp: 1704582138 +I: removing directory /srv/workspace/pbuilder/2876378 and its subdirectories +I: Current time: Sun Jan 7 13:18:28 +14 2024 +I: pbuilder-time-stamp: 1704583108