Diff of the two buildlogs: -- --- b1/build.log 2024-01-11 21:51:58.429269142 +0000 +++ b2/build.log 2024-01-11 22:02:26.927294849 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jan 11 09:19:40 -12 2024 -I: pbuilder-time-stamp: 1705007980 +I: Current time: Fri Jan 12 11:52:52 +14 2024 +I: pbuilder-time-stamp: 1705009972 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./pymol_2.4.0+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.z8R3HeMN/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.A98Wlor5/trustedkeys.kbx': General error gpgv: Signature made Sat May 22 11:26:38 2021 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key @@ -38,49 +38,80 @@ dpkg-source: info: applying 40_mstop_movies.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/7351/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/D01_modify_environment starting +debug: Running on jtx1c. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 11 21:53 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='d0fd8c2ee5b1497c83351793f084fee6' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='7351' - PS1='# ' - PS2='> ' + INVOCATION_ID=3097b497a36e40debc4a7dba6ae8cab2 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=17509 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.crbW3RLN/pbuilderrc_mLz0 --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.crbW3RLN/b1 --logfile b1/build.log pymol_2.4.0+dfsg-2.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.crbW3RLN/pbuilderrc_00Pc --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.crbW3RLN/b2 --logfile b2/build.log pymol_2.4.0+dfsg-2.dsc' + SUDO_GID=114 + SUDO_UID=108 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32c 6.1.0-17-armmp-lpae #1 SMP Debian 6.1.69-1 (2023-12-30) armv7l GNU/Linux + Linux i-capture-the-hostname 5.10.0-26-arm64 #1 SMP Debian 5.10.197-1 (2023-09-29) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Mar 27 2022 bash @@ -140,7 +171,7 @@ -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jan 7 09:26 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 11 21:53 sh -> /bin/bash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jan 20 2022 su @@ -166,7 +197,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/7351/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -485,7 +516,7 @@ Get: 251 http://deb.debian.org/debian bullseye/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 252 http://deb.debian.org/debian bullseye/main armhf texlive-base all 2020.20210202-3 [20.8 MB] Get: 253 http://deb.debian.org/debian bullseye/main armhf texlive-latex-base all 2020.20210202-3 [1120 kB] -Fetched 147 MB in 6s (23.4 MB/s) +Fetched 147 MB in 13s (11.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17486 files and directories currently installed.) @@ -1294,8 +1325,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Jan 11 21:23:37 UTC 2024. -Universal Time is now: Thu Jan 11 21:23:37 UTC 2024. +Local time is now: Thu Jan 11 21:54:08 UTC 2024. +Universal Time is now: Thu Jan 11 21:54:08 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up xtrans-dev (1.4.0-1) ... @@ -1549,7 +1580,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/pymol-2.4.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pymol_2.4.0+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/pymol-2.4.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pymol_2.4.0+dfsg-2_source.changes dpkg-buildpackage: info: source package pymol dpkg-buildpackage: info: source version 2.4.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -1582,237 +1617,237 @@ I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/lst.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/mae.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/brick.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/mass.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/mol.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/map.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/models.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/arc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/protein.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/place.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/gms.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -copying modules/chempy/cif.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments -copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ -copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ -copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ -copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ -copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf -copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf -copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast -copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 +copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 +copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk -copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk +copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/apbs_tools.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/startup creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/demo +copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal -copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal +copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/demo -copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/querying.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/completing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/editor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/selector.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/moving.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/checking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/api.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/importing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/externing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/computing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/moving.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/parser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/querying.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/internal.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/computing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/constants.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/povray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/menu.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/completing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/preset.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/internal.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/editor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/api.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/creating.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/callback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/movie.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/importing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/checking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/externing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/editing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/povray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/locking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/helping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/callback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/preset.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/headering.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/xray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/movie.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/constants.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/parser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol -copying modules/pymol/headering.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/helping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/menu.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/creating.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/xray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol +copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/fedora.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/fedora.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard +copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl -copying modules/pymol/opengl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glu -copying modules/pymol/opengl/glu/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glu -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/gl -copying modules/pymol/opengl/gl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/gl -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut -copying modules/pymol/opengl/glut/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry -copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/contrib -copying modules/pymol/contrib/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/contrib creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins +copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins -copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins -copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins +copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry +copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt -creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 -copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 -copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2 +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl +copying modules/pymol/opengl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut +copying modules/pymol/opengl/glut/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glu +copying modules/pymol/opengl/glu/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glu +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/gl +copying modules/pymol/opengl/gl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/gl +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/contrib +copying modules/pymol/contrib/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/contrib +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/models.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/place.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/mass.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/cif.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/arc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/mae.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/map.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/gms.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/mol.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/lst.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/protein.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/brick.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast +copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf +copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf +copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments +copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin +creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ +copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ +copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ +copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ +copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt -copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt +copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax creating /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms running build_ext building 'pymol._cmd' extension creating build/temp.linux-armhf-3.9 @@ -1836,8 +1871,8 @@ creating build/temp.linux-armhf-3.9/ov/src arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD build/generated/ShaderText.cpp -o build/temp.linux-armhf-3.9/build/generated/ShaderText.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerInitAll': contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:271:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation] @@ -2046,10 +2081,6 @@ 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_readline': -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:279:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 279 | for (i = 0; i < strlen(line); ++i) { - | ^ In function 'strncpy', inlined from 'get_pdb_header' at contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:190:5, inlined from 'open_pdb_read' at contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:79:7: @@ -2062,6 +2093,10 @@ /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 4 bytes from a string of length 20 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_readline': +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:279:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 279 | for (i = 0; i < strlen(line); ++i) { + | ^ In file included from contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:70: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] @@ -2177,12 +2212,12 @@ /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In function 'strncpy', inlined from 'read_dlpoly_structure' at contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:267:5: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 @@ -2201,9 +2236,10 @@ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:82:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 82 | fread(floatHeader, sizeof(float), 6, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void put_element_ply(PlyFile*, void*)': contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable 'i' [-Wunused-variable] @@ -2248,7 +2284,6 @@ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2099:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2099 | fread (ptr, 8, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:42: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'angular_momentum_expon': contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] @@ -2493,33 +2528,6 @@ | ~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function 'open_rst_read': -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable 'timesteprst' set but not used [-Wunused-but-set-variable] - 48 | double timesteprst; - | ^~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function 'void* open_cube_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 175 | fgets(readbuf, 1023, cube->fd); // go on to next line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 181 | fgets(readbuf, 1023, cube->fd); // skip second header line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 326 | fgets(readbuf, 1023, cube->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 337 | fgets(readbuf, 1023, cube->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 339 | fscanf(cube->fd, "%d", &cube->nsets); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 344 | fscanf(cube->fd, "%d", &orb); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 349 | fgets(readbuf, 1023, cube->fd); // gobble up rest of line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'void DDmkdir(const string&, mode_t, int, int)': contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); @@ -2549,7 +2557,33 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function 'open_rst_read': +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable 'timesteprst' set but not used [-Wunused-but-set-variable] + 48 | double timesteprst; + | ^~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function 'void* open_cube_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 175 | fgets(readbuf, 1023, cube->fd); // go on to next line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 181 | fgets(readbuf, 1023, cube->fd); // skip second header line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 326 | fgets(readbuf, 1023, cube->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 337 | fgets(readbuf, 1023, cube->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 339 | fscanf(cube->fd, "%d", &cube->nsets); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 344 | fscanf(cube->fd, "%d", &orb); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 349 | fgets(readbuf, 1023, cube->fd); // gobble up rest of line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'std::string framefile(const string&, size_t, size_t, int, int)': contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:28: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); @@ -2576,6 +2610,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:40: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] @@ -2614,8 +2649,12 @@ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 171 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] + 160 | static int get_pte_idx_from_string(const char *label) { + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c:41: In function 'strncpy', @@ -2623,10 +2662,6 @@ /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] - 160 | static int get_pte_idx_from_string(const char *label) { - | ^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function 'void* open_uhbd_read(const char*, const char*, int*)': contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:102:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -2650,6 +2685,10 @@ 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:40: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] + 160 | static int get_pte_idx_from_string(const char *label) { + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/map:61, from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:58: /usr/include/c++/10/bits/stl_map.h: In member function 'int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const': @@ -2688,10 +2727,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:40: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] - 160 | static int get_pte_idx_from_string(const char *label) { - | ^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Feedback.cpp -o build/temp.linux-armhf-3.9/layer0/Feedback.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:47: @@ -2728,8 +2763,8 @@ /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation] 136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Field.cpp -o build/temp.linux-armhf-3.9/layer0/Field.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function 'int read_vtk_data_ex(void*, molfile_volumetric_readwrite_t*)': contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:371:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 371 | fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz); @@ -2771,7 +2806,6 @@ 72 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void eatline(FILE*)': contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 238 | fgets(readbuf, 1024, fd); // go on to next line @@ -2801,16 +2835,10 @@ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 508 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'int read_edm_data(void*, int, float*, float*)': -contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 240 | fgets(readbuf, 13, edm->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'void eatline(FILE*)': -contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 44 | fgets(readbuf, 1024, fd); // go on to next line - | ~~~~~^~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/File.cpp -o build/temp.linux-armhf-3.9/layer0/File.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { @@ -2822,69 +2850,9 @@ /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Block.cpp -o build/temp.linux-armhf-3.9/layer0/Block.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/File.cpp -o build/temp.linux-armhf-3.9/layer0/File.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function 'void* open_fs4_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 79 | fread(&dataBegin, sizeof(int), 1, fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160: -contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'angular_momentum_expon': -contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 545 | for (i=0; ifile); @@ -2915,34 +2883,14 @@ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:183:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/string.h:495, - from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:155: -In function 'strncpy', - inlined from 'read_gamess_rundata' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:615:3: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'strncpy', - inlined from 'read_gamess_rundata' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:620:3: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 4096 bytes from a string of length 8191 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'strncpy', - inlined from 'read_gamess_rundata' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:621:3: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'strncpy', - inlined from 'read_gamess_rundata' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:622:3: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'strncpy', - inlined from 'get_coordinates' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1618:5: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/GenericBuffer.cpp -o build/temp.linux-armhf-3.9/layer0/GenericBuffer.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'int read_edm_data(void*, int, float*, float*)': +contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 240 | fgets(readbuf, 13, edm->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'void eatline(FILE*)': +contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 44 | fgets(readbuf, 1024, fd); // go on to next line + | ~~~~~^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'int read_mol2_timestep(void*, int, molfile_timestep_t*)': contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:275:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -2981,16 +2929,12 @@ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 92 | fgets(line, LINESIZE, fd); // Read the charge_type | ~~~~~^~~~~~~~~~~~~~~~~~~~ -In function 'strncat', - inlined from 'get_basis_options' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1422:5: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation] - 136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In function 'strncat', - inlined from 'get_basis_options' at contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1411:5: -/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation] - 136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/GenericBuffer.cpp -o build/temp.linux-armhf-3.9/layer0/GenericBuffer.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function 'void* open_fs4_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 79 | fread(&dataBegin, sizeof(int), 1, fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'angular_momentum_expon': @@ -3037,10 +2981,55 @@ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: 'get_pte_label' defined but not used [-Wunused-function] 95 | static const char *get_pte_label(const int idx) | ^~~~~~~~~~~~~ +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160: +contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'angular_momentum_expon': +contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 545 | for (i=0; ifd) != 3*n) { + | ^~ +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function 'read_mmtk_cdf_structure': +contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:730:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 730 | if (len > sizeof(name)) { + | ^ +contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function 'read_mmtk_cdf_timestep': +contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:1060:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 1060 | for (i=0; i<(3 * mmtk->atom_numberdim); i++) { + | ^ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function 'void line3(FILE*, GRASSP*)': contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:186:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 186 | fread(line3, 1, 80, infile); @@ -3266,72 +3353,20 @@ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 398 | fread(properties, sizeof(float), 3 * nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/PostProcess.cpp -o build/temp.linux-armhf-3.9/layer0/PostProcess.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)': -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 91 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 116 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 132 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 149 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 155 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 161 | fgets(line, 80, infile); //one more read to keep us in sync - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 170 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 217 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 237 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 256 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/offplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp: In function 'void* open_grid_read(const char*, const char*, int*)': contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:84:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 84 | fread(&dataBegin, sizeof(int), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function 'read_next_timestep': -contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:103:10: warning: variable 'numatoms' set but not used [-Wunused-but-set-variable] - 103 | int i, numatoms; - | ^~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function 'write_timestep': -contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:206:55: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 206 | if (fwrite(tmp, sizeof(double), 3*n, namdbin->fd) != 3*n) { - | ^~ -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/ShaderMgr.cpp -o build/temp.linux-armhf-3.9/layer0/ShaderMgr.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function 'int mdio_readline(md_file*, char*, int, int)': contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:426:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 426 | fgets(buf, n, mf->f); | ~~~~~^~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function 'read_mmtk_cdf_structure': -contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:730:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 730 | if (len > sizeof(name)) { - | ^ -contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function 'read_mmtk_cdf_timestep': -contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:1060:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 1060 | for (i=0; i<(3 * mmtk->atom_numberdim); i++) { - | ^ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/offplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/ShaderMgr.cpp -o build/temp.linux-armhf-3.9/layer0/ShaderMgr.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp: In function 'int read_parm7_structure(void*, int*, molfile_atom_t*)': contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:78:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3412,7 +3447,6 @@ 97 | fscanf(file, "%s\n", buf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/hash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:24: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h: In member function 'int {anonymous}::ReadPARM::readparm(FILE*)': contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:435:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3472,15 +3506,16 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 | &prm->Xcap, &prm->Ycap, &prm->Zcap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/hash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/inthash.c -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/inthash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Basis.cpp -o build/temp.linux-armhf-3.9/layer1/Basis.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.linux-armhf-3.9/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Basis.cpp -o build/temp.linux-armhf-3.9/layer1/Basis.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUTHel18.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUTHel18.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontType.cpp -o build/temp.linux-armhf-3.9/layer1/FontType.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Map.cpp -o build/temp.linux-armhf-3.9/layer0/Map.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/ButMode.cpp -o build/temp.linux-armhf-3.9/layer1/ButMode.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Match.cpp -o build/temp.linux-armhf-3.9/layer0/Match.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Movie.cpp -o build/temp.linux-armhf-3.9/layer1/Movie.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Match.cpp -o build/temp.linux-armhf-3.9/layer0/Match.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/ButMode.cpp -o build/temp.linux-armhf-3.9/layer1/ButMode.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Matrix.cpp -o build/temp.linux-armhf-3.9/layer0/Matrix.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/CGO.cpp -o build/temp.linux-armhf-3.9/layer1/CGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Ortho.cpp -o build/temp.linux-armhf-3.9/layer1/Ortho.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 @@ -3489,7 +3524,6 @@ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/ShaderPrg.cpp -o build/temp.linux-armhf-3.9/layer0/ShaderPrg.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Parse.cpp -o build/temp.linux-armhf-3.9/layer0/Parse.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/SceneRender.cpp -o build/temp.linux-armhf-3.9/layer1/SceneRender.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Sphere.cpp -o build/temp.linux-armhf-3.9/layer0/Sphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In function 'int add_normal_char(COrtho*, unsigned char)', inlined from 'void OrthoKey(PyMOLGlobals*, unsigned char, int, int, int)' at layer1/Ortho.cpp:873:30: layer1/Ortho.cpp:850:34: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] @@ -3499,10 +3533,10 @@ layer1/Ortho.cpp:80:17: note: at offset 0 to object 'COrtho::Line' with size 262144 declared here 80 | OrthoLineType Line[OrthoSaveLines + 1]{}; | ^~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/P.cpp -o build/temp.linux-armhf-3.9/layer1/P.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Sphere.cpp -o build/temp.linux-armhf-3.9/layer0/Sphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Tetsurf.cpp -o build/temp.linux-armhf-3.9/layer0/Tetsurf.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/ScrollBar.cpp -o build/temp.linux-armhf-3.9/layer1/ScrollBar.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/P.cpp -o build/temp.linux-armhf-3.9/layer1/P.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Seq.cpp -o build/temp.linux-armhf-3.9/layer1/Seq.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer1/P.cpp: In function 'void PSetupEmbedded(PyMOLGlobals*, int, char**)': layer1/P.cpp:1961:22: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations] 1961 | PyEval_InitThreads(); @@ -3513,18 +3547,18 @@ /usr/include/python3.9/ceval.h:130:37: note: declared here 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); | ^~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Texture.cpp -o build/temp.linux-armhf-3.9/layer0/Texture.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Seq.cpp -o build/temp.linux-armhf-3.9/layer1/Seq.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/PConv.cpp -o build/temp.linux-armhf-3.9/layer1/PConv.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Setting.cpp -o build/temp.linux-armhf-3.9/layer1/Setting.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Tracker.cpp -o build/temp.linux-armhf-3.9/layer0/Tracker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Texture.cpp -o build/temp.linux-armhf-3.9/layer0/Texture.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Picking.cpp -o build/temp.linux-armhf-3.9/layer1/Picking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Setting.cpp -o build/temp.linux-armhf-3.9/layer1/Setting.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Pop.cpp -o build/temp.linux-armhf-3.9/layer1/Pop.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Triangle.cpp -o build/temp.linux-armhf-3.9/layer0/Triangle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Tracker.cpp -o build/temp.linux-armhf-3.9/layer0/Tracker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/PyMOLObject.cpp -o build/temp.linux-armhf-3.9/layer1/PyMOLObject.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Triangle.cpp -o build/temp.linux-armhf-3.9/layer0/Triangle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Ray.cpp -o build/temp.linux-armhf-3.9/layer1/Ray.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Util.cpp -o build/temp.linux-armhf-3.9/layer0/Util.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Util2.cpp -o build/temp.linux-armhf-3.9/layer0/Util2.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Vector.cpp -o build/temp.linux-armhf-3.9/layer0/Vector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer1/Ray.cpp: In function 'void RayRenderVRML2(CRay*, int, int, char**, float, float, float, float, float)': layer1/Ray.cpp:1538:20: warning: '%s' directive writing up to 1023 bytes into a region of size between 0 and 914 [-Wformat-overflow=] 1538 | "%s" @@ -3555,14 +3589,14 @@ | ~~~~~~~~~~~~~~~~~~ 1543 | vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Vector.cpp -o build/temp.linux-armhf-3.9/layer0/Vector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/Word.cpp -o build/temp.linux-armhf-3.9/layer0/Word.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer0/os_gl.cpp -o build/temp.linux-armhf-3.9/layer0/os_gl.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/CifFile.cpp -o build/temp.linux-armhf-3.9/layer2/CifFile.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/CifMoleculeReader.cpp -o build/temp.linux-armhf-3.9/layer2/CifMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Rep.cpp -o build/temp.linux-armhf-3.9/layer1/Rep.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/COLLADA.cpp -o build/temp.linux-armhf-3.9/layer1/COLLADA.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/CifMoleculeReader.cpp -o build/temp.linux-armhf-3.9/layer2/CifMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Scene.cpp -o build/temp.linux-armhf-3.9/layer1/Scene.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Character.cpp -o build/temp.linux-armhf-3.9/layer1/Character.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/COLLADA.cpp -o build/temp.linux-armhf-3.9/layer1/COLLADA.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 In file included from /usr/include/c++/10/map:60, from layer2/CifMoleculeReader.cpp:9: /usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': @@ -3586,7 +3620,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Color.cpp -o build/temp.linux-armhf-3.9/layer1/Color.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Character.cpp -o build/temp.linux-armhf-3.9/layer1/Character.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer1/Scene.cpp: In function 'int SceneClick(Block*, int, int, int, int, double)': layer1/Scene.cpp:4227:36: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 242 [-Wformat-truncation=] 4227 | PRINTF " You clicked %s", buffer ENDF(G); @@ -3789,37 +3823,36 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4405 | sel_mode_kw, buf1); | ~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Control.cpp -o build/temp.linux-armhf-3.9/layer1/Control.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Color.cpp -o build/temp.linux-armhf-3.9/layer1/Color.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/ScenePicking.cpp -o build/temp.linux-armhf-3.9/layer1/ScenePicking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/CoordSet.cpp -o build/temp.linux-armhf-3.9/layer2/CoordSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/SceneRay.cpp -o build/temp.linux-armhf-3.9/layer1/SceneRay.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Extrude.cpp -o build/temp.linux-armhf-3.9/layer1/Extrude.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/CoordSet.cpp -o build/temp.linux-armhf-3.9/layer2/CoordSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Control.cpp -o build/temp.linux-armhf-3.9/layer1/Control.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/CoordSet.cpp: In member function 'void CoordSet::update(int)': layer2/CoordSet.cpp:1240:72: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 223 [-Wformat-truncation=] 1240 | PRINTFB(G, FB_CoordSet, FB_Blather) " CoordSetUpdate-Entered: object %s state %d cset %p\n", | ^~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/DistSet.cpp -o build/temp.linux-armhf-3.9/layer2/DistSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Extrude.cpp -o build/temp.linux-armhf-3.9/layer1/Extrude.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectGadget.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectGadget.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/DistSet.cpp -o build/temp.linux-armhf-3.9/layer2/DistSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectGadgetRamp.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectGadgetRamp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/GadgetSet.cpp -o build/temp.linux-armhf-3.9/layer2/GadgetSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Font.cpp -o build/temp.linux-armhf-3.9/layer1/Font.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUT.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUT.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/GadgetSet.cpp -o build/temp.linux-armhf-3.9/layer2/GadgetSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectGadgetRamp.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectGadgetRamp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/HydrogenAdder.cpp -o build/temp.linux-armhf-3.9/layer2/HydrogenAdder.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectGroup.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectGroup.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUT8x13.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUT8x13.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUT9x15.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUT9x15.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/HydrogenAdder.cpp -o build/temp.linux-armhf-3.9/layer2/HydrogenAdder.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectMap.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectMap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUTHel10.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUTHel10.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/FontGLUTHel12.cpp -o build/temp.linux-armhf-3.9/layer1/FontGLUTHel12.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepDistDash.cpp -o build/temp.linux-armhf-3.9/layer2/RepDistDash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/MmodTyping.cpp -o build/temp.linux-armhf-3.9/layer2/MmodTyping.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectGroup.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectGroup.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/MmtfMoleculeReader.cpp -o build/temp.linux-armhf-3.9/layer2/MmtfMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepDistLabel.cpp -o build/temp.linux-armhf-3.9/layer2/RepDistLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectMap.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectMap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/Mol2Typing.cpp -o build/temp.linux-armhf-3.9/layer2/Mol2Typing.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepDistLabel.cpp -o build/temp.linux-armhf-3.9/layer2/RepDistLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/MolV3000.cpp -o build/temp.linux-armhf-3.9/layer2/MolV3000.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepDot.cpp -o build/temp.linux-armhf-3.9/layer2/RepDot.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectAlignment.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectAlignment.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepEllipsoid.cpp -o build/temp.linux-armhf-3.9/layer2/RepEllipsoid.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMap.cpp: In function 'void ObjectMapDump(const ObjectMap*, const char*, int, int)': layer2/ObjectMap.cpp:5982:24: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5982 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); @@ -3834,8 +3867,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepLabel.cpp -o build/temp.linux-armhf-3.9/layer2/RepLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectCGO.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectCGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepDot.cpp -o build/temp.linux-armhf-3.9/layer2/RepDot.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepEllipsoid.cpp -o build/temp.linux-armhf-3.9/layer2/RepEllipsoid.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)': layer2/ObjectMap.cpp:2977:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2977 | " PHIStrToMap: %s\n", cc ENDFB(I->G); @@ -3889,6 +3922,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectCGO.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectCGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepLabel.cpp -o build/temp.linux-armhf-3.9/layer2/RepLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMap.cpp: In function 'int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)': layer2/ObjectMap.cpp:4297:18: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4297 | " ObjectMap: %s\n", cc ENDFB(I->G); @@ -3917,11 +3952,9 @@ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectCallback.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectCallback.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepMesh.cpp -o build/temp.linux-armhf-3.9/layer2/RepMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectMesh.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepMesh.cpp -o build/temp.linux-armhf-3.9/layer2/RepMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectDist.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectDist.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Shaker.cpp -o build/temp.linux-armhf-3.9/layer1/Shaker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepNonbonded.cpp -o build/temp.linux-armhf-3.9/layer2/RepNonbonded.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMesh.cpp: In function 'void ObjectMeshDump(ObjectMesh*, const char*, int, int)': layer2/ObjectMesh.cpp:329:27: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 329 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); @@ -3935,7 +3968,6 @@ layer2/ObjectMesh.cpp:328:7: note: in expansion of macro 'PRINTFB' 328 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/Sculpt.cpp -o build/temp.linux-armhf-3.9/layer2/Sculpt.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMesh.cpp: In member function 'virtual void ObjectMesh::update()': layer2/ObjectMesh.cpp:507:41: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 507 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", ms->MapName @@ -3961,13 +3993,10 @@ layer2/ObjectMesh.cpp:539:13: note: in expansion of macro 'PRINTFB' 539 | PRINTFB(G, FB_ObjectMesh, FB_Details) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Symmetry.cpp -o build/temp.linux-armhf-3.9/layer1/Symmetry.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/Sculpt.cpp -o build/temp.linux-armhf-3.9/layer2/Sculpt.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectMolecule.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectMolecule.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepNonbonded.cpp -o build/temp.linux-armhf-3.9/layer2/RepNonbonded.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepNonbondedSphere.cpp -o build/temp.linux-armhf-3.9/layer2/RepNonbondedSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Text.cpp -o build/temp.linux-armhf-3.9/layer1/Text.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepRibbon.cpp -o build/temp.linux-armhf-3.9/layer2/RepRibbon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/SculptCache.cpp -o build/temp.linux-armhf-3.9/layer2/SculptCache.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/SideChainHelper.cpp -o build/temp.linux-armhf-3.9/layer2/SideChainHelper.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMolecule.cpp: In function 'CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)': layer2/ObjectMolecule.cpp:7785:37: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7785 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) @@ -3980,11 +4009,16 @@ layer2/ObjectMolecule.cpp:7784:3: note: in expansion of macro 'PRINTFB' 7784 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSphere.cpp -o build/temp.linux-armhf-3.9/layer2/RepSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepRibbon.cpp -o build/temp.linux-armhf-3.9/layer2/RepRibbon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/SculptCache.cpp -o build/temp.linux-armhf-3.9/layer2/SculptCache.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/SideChainHelper.cpp -o build/temp.linux-armhf-3.9/layer2/SideChainHelper.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Shaker.cpp -o build/temp.linux-armhf-3.9/layer1/Shaker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/VFont.cpp -o build/temp.linux-armhf-3.9/layer2/VFont.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSphere.cpp -o build/temp.linux-armhf-3.9/layer2/RepSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Symmetry.cpp -o build/temp.linux-armhf-3.9/layer1/Symmetry.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/AtomIterators.cpp -o build/temp.linux-armhf-3.9/layer3/AtomIterators.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Text.cpp -o build/temp.linux-armhf-3.9/layer1/Text.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSphereGenerate.cpp -o build/temp.linux-armhf-3.9/layer2/RepSphereGenerate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/CifDataValueFormatter.cpp -o build/temp.linux-armhf-3.9/layer3/CifDataValueFormatter.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMolecule.cpp: In member function 'virtual void ObjectMolecule::update()': layer2/ObjectMolecule.cpp:10827:82: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10827 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", @@ -4011,8 +4045,9 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10956 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSphereImmediate.cpp -o build/temp.linux-armhf-3.9/layer2/RepSphereImmediate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/CifDataValueFormatter.cpp -o build/temp.linux-armhf-3.9/layer3/CifDataValueFormatter.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Editor.cpp -o build/temp.linux-armhf-3.9/layer3/Editor.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSphereImmediate.cpp -o build/temp.linux-armhf-3.9/layer2/RepSphereImmediate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepSurface.cpp -o build/temp.linux-armhf-3.9/layer2/RepSurface.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Editor.cpp: In function 'void EditorPrepareDrag(PyMOLGlobals*, CObject*, int, int, int, int)': layer3/Editor.cpp:1944:29: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] @@ -4046,11 +4081,8 @@ layer3/Editor.cpp:339:12: note: 'sprintf' output between 12 and 267 bytes into a destination of size 256 339 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/TypeFace.cpp -o build/temp.linux-armhf-3.9/layer1/TypeFace.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/View.cpp -o build/temp.linux-armhf-3.9/layer1/View.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Executive.cpp -o build/temp.linux-armhf-3.9/layer3/Executive.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectMolecule2.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectMolecule2.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Wizard.cpp -o build/temp.linux-armhf-3.9/layer1/Wizard.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Executive.cpp -o build/temp.linux-armhf-3.9/layer3/Executive.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveLoad(PyMOLGlobals*, const ExecutiveLoadArgs&)': layer3/Executive.cpp:3914:15: warning: unused variable 'object_props' [-Wunused-variable] 3914 | const char* object_props = args.object_props.c_str(); @@ -4061,7 +4093,6 @@ layer3/Executive.cpp:3924:8: warning: unused variable 'mimic' [-Wunused-variable] 3924 | auto mimic = args.mimic; | ^~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AssemblyHelpers.cpp -o build/temp.linux-armhf-3.9/layer2/AssemblyHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectMolecule2.cpp: In function 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)': layer2/ObjectMolecule2.cpp:313:27: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 313 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", @@ -4076,8 +4107,9 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepWireBond.cpp -o build/temp.linux-armhf-3.9/layer2/RepWireBond.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AtomInfo.cpp -o build/temp.linux-armhf-3.9/layer2/AtomInfo.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/TypeFace.cpp -o build/temp.linux-armhf-3.9/layer1/TypeFace.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/View.cpp -o build/temp.linux-armhf-3.9/layer1/View.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectSlice.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectSlice.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)': layer3/Executive.cpp:9162:58: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9162 | " Remove: eliminated %d atoms in model \"%s\".\n", @@ -4091,7 +4123,7 @@ layer3/Executive.cpp:9161:15: note: in expansion of macro 'PRINTFB' 9161 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectSlice.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectSlice.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepWireBond.cpp -o build/temp.linux-armhf-3.9/layer2/RepWireBond.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)': layer3/Executive.cpp:11590:28: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11590 | " Setting: %s set for %d bonds in object \"%s\".\n", @@ -4435,7 +4467,7 @@ layer3/Executive.cpp:12508:23: note: in expansion of macro 'PRINTF' 12508 | PRINTF | ^~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Seeker.cpp -o build/temp.linux-armhf-3.9/layer3/Seeker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer1/Wizard.cpp -o build/temp.linux-armhf-3.9/layer1/Wizard.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectSlice.cpp: In member function 'virtual void ObjectSlice::update()': layer2/ObjectSlice.cpp:639:42: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName @@ -4461,7 +4493,6 @@ layer2/ObjectSlice.cpp:649:11: note: in expansion of macro 'PRINTFB' 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AtomInfoHistory.cpp -o build/temp.linux-armhf-3.9/layer2/AtomInfoHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)': layer3/Executive.cpp:6023:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 6023 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); @@ -4487,39 +4518,10 @@ layer3/Executive.cpp:6013:7: note: in expansion of macro 'PRINTFB' 6013 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AssemblyHelpers.cpp -o build/temp.linux-armhf-3.9/layer2/AssemblyHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Seeker.cpp -o build/temp.linux-armhf-3.9/layer3/Seeker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectSurface.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectSurface.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -layer3/Seeker.cpp: In function 'void SeekerSelectionToggleRange(PyMOLGlobals*, CSeqRow*, int, int, int, int, int)': -layer3/Seeker.cpp:148:50: warning: '%s' directive writing up to 1023 bytes into a region of size between 754 and 1009 [-Wformat-overflow=] - 148 | sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName, - | ^~ - 149 | buf1); - | ~~~~ -In file included from /usr/include/stdio.h:867, - from /usr/include/malloc.h:24, - from layer0/os_predef.h:86, - from layer0/os_python.h:21, - from layer3/Seeker.cpp:20: -/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output 28 or more bytes (assuming 1306) into a destination of size 1024 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -layer3/Seeker.cpp: In function 'void SeekerSelectionToggle(PyMOLGlobals*, CSeqRow*, int, int, int, int)': -layer3/Seeker.cpp:232:50: warning: '%s' directive writing up to 1023 bytes into a region of size between 754 and 1009 [-Wformat-overflow=] - 232 | sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName, - | ^~ - 233 | buf1); - | ~~~~ -In file included from /usr/include/stdio.h:867, - from /usr/include/malloc.h:24, - from layer0/os_predef.h:86, - from layer0/os_python.h:21, - from layer3/Seeker.cpp:20: -/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output 28 or more bytes (assuming 1306) into a destination of size 1024 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AtomInfo.cpp -o build/temp.linux-armhf-3.9/layer2/AtomInfo.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int)': layer3/Executive.cpp:9495:53: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9495 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name @@ -4557,7 +4559,38 @@ layer3/Executive.cpp:9519:17: note: in expansion of macro 'PRINTFB' 9519 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Selector.cpp -o build/temp.linux-armhf-3.9/layer3/Selector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +layer3/Seeker.cpp: In function 'void SeekerSelectionToggleRange(PyMOLGlobals*, CSeqRow*, int, int, int, int, int)': +layer3/Seeker.cpp:148:50: warning: '%s' directive writing up to 1023 bytes into a region of size between 754 and 1009 [-Wformat-overflow=] + 148 | sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName, + | ^~ + 149 | buf1); + | ~~~~ +In file included from /usr/include/stdio.h:867, + from /usr/include/malloc.h:24, + from layer0/os_predef.h:86, + from layer0/os_python.h:21, + from layer3/Seeker.cpp:20: +/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output 28 or more bytes (assuming 1306) into a destination of size 1024 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +layer3/Seeker.cpp: In function 'void SeekerSelectionToggle(PyMOLGlobals*, CSeqRow*, int, int, int, int)': +layer3/Seeker.cpp:232:50: warning: '%s' directive writing up to 1023 bytes into a region of size between 754 and 1009 [-Wformat-overflow=] + 232 | sprintf(buf2, "%scmd.select(\"%s\",\"%s\",enable=1)\n", prefix, selName, + | ^~ + 233 | buf1); + | ~~~~ +In file included from /usr/include/stdio.h:867, + from /usr/include/malloc.h:24, + from layer0/os_predef.h:86, + from layer0/os_python.h:21, + from layer3/Seeker.cpp:20: +/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output 28 or more bytes (assuming 1306) into a destination of size 1024 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In function 'void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)': layer2/ObjectSurface.cpp:264:30: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 264 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); @@ -4571,6 +4604,7 @@ layer2/ObjectSurface.cpp:263:7: note: in expansion of macro 'PRINTFB' 263 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer3/Selector.cpp -o build/temp.linux-armhf-3.9/layer3/Selector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectSurface.cpp: In member function 'virtual void ObjectSurface::update()': layer2/ObjectSurface.cpp:493:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 493 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); @@ -4584,8 +4618,8 @@ layer2/ObjectSurface.cpp:492:13: note: in expansion of macro 'PRINTFB' 492 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/BondTypeHistory.cpp -o build/temp.linux-armhf-3.9/layer2/BondTypeHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/ObjectVolume.cpp -o build/temp.linux-armhf-3.9/layer2/ObjectVolume.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/AtomInfoHistory.cpp -o build/temp.linux-armhf-3.9/layer2/AtomInfoHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'void ExecutiveManageObject(PyMOLGlobals*, CObject*, int, int)': layer3/Executive.cpp:14515:37: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14515 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", @@ -4700,10 +4734,6 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 7315 | buffer); | ~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVOneToAny.cpp -o build/temp.linux-armhf-3.9/ov/src/OVOneToAny.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVOneToOne.cpp -o build/temp.linux-armhf-3.9/ov/src/OVOneToOne.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVRandom.cpp -o build/temp.linux-armhf-3.9/ov/src/OVRandom.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/ov_utility.cpp -o build/temp.linux-armhf-3.9/ov/src/ov_utility.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer2/ObjectVolume.cpp: In function 'ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)': layer2/ObjectVolume.cpp:74:33: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 74 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName @@ -4763,6 +4793,8 @@ layer3/Executive.cpp:14183:19: note: in expansion of macro 'PRINTFB' 14183 | PRINTFB(G, FB_Executive, FB_Blather) | ^~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepAngle.cpp -o build/temp.linux-armhf-3.9/layer2/RepAngle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/BondTypeHistory.cpp -o build/temp.linux-armhf-3.9/layer2/BondTypeHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In member function 'virtual int CExecutive::drag(int, int, int)': layer3/Executive.cpp:15534:55: warning: '%s' directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15534 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", @@ -4774,7 +4806,7 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15535 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepAngle.cpp -o build/temp.linux-armhf-3.9/layer2/RepAngle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVOneToAny.cpp -o build/temp.linux-armhf-3.9/ov/src/OVOneToAny.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveSetName(PyMOLGlobals*, const char*, const char*)': layer3/Executive.cpp:3623:41: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3623 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", @@ -4790,7 +4822,10 @@ layer3/Executive.cpp:3622:5: note: in expansion of macro 'PRINTFB' 3622 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVOneToOne.cpp -o build/temp.linux-armhf-3.9/ov/src/OVOneToOne.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD layer2/RepCartoon.cpp -o build/temp.linux-armhf-3.9/layer2/RepCartoon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/OVRandom.cpp -o build/temp.linux-armhf-3.9/ov/src/OVRandom.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 +arm-linux-gnueabihf-g++ -pthread -g -O2 -fdebug-prefix-map=/build/reproducible-path/pymol-2.4.0+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.9 -c -MMD ov/src/ov_utility.cpp -o build/temp.linux-armhf-3.9/ov/src/ov_utility.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 layer3/Selector.cpp: In function 'int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)': layer3/Selector.cpp:1830:70: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1830 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", @@ -4890,8 +4925,8 @@ run_tests: C0010hello... run_tests: C0010hello.log DIFFERS over about 1 lines. run_tests: C0020pdb... - run_tests: C0020pdb.log DIFFERS over about 4 lines. run_tests: C0020pdb.pdb is missing. + run_tests: C0020pdb.log DIFFERS over about 4 lines. run_tests: C0021pdbstr... run_tests: C0021pdbstr.log DIFFERS over about 3 lines. run_tests: C0025mol... @@ -4901,8 +4936,8 @@ run_tests: C0027mol2... run_tests: C0027mol2.log DIFFERS over about 36 lines. run_tests: C0030pkl... - run_tests: C0030pkl.log DIFFERS over about 4 lines. run_tests: C0030pkl.pdb is missing. + run_tests: C0030pkl.log DIFFERS over about 4 lines. run_tests: C0050multi... run_tests: C0050multi.log DIFFERS over about 4 lines. run_tests: C0060delete... @@ -4910,8 +4945,8 @@ run_tests: C0070rep... run_tests: C0070rep.log DIFFERS over about 9 lines. run_tests: C0080create... - run_tests: C0080create.1.pdb is missing. run_tests: C0080create.log DIFFERS over about 61 lines. + run_tests: C0080create.1.pdb is missing. run_tests: C0080create.2.pdb is missing. run_tests: C0100select... run_tests: C0100select.log DIFFERS over about 90 lines. @@ -4922,8 +4957,8 @@ run_tests: C0140iterate... run_tests: C0140iterate.log DIFFERS over about 23 lines. run_tests: C0150alter... - run_tests: C0150alter.1.pdb is missing. run_tests: C0150alter.log DIFFERS over about 11 lines. + run_tests: C0150alter.1.pdb is missing. run_tests: C0160get... run_tests: C0160get.log DIFFERS over about 42 lines. run_tests: C0170scene... @@ -4947,22 +4982,22 @@ run_tests: C0600util... run_tests: C0600util.log DIFFERS over about 27 lines. run_tests: C0700odd... - run_tests: C0700odd.9.pdb is missing. - run_tests: C0700odd.F.pdb is missing. - run_tests: C0700odd.log DIFFERS over about 204 lines. - run_tests: C0700odd.B.pdb is missing. - run_tests: C0700odd.2.pdb is missing. - run_tests: C0700odd.7.pdb is missing. - run_tests: C0700odd.C.pdb is missing. run_tests: C0700odd.A.pdb is missing. - run_tests: C0700odd.E.pdb is missing. + run_tests: C0700odd.3.pdb is missing. run_tests: C0700odd.1.pdb is missing. - run_tests: C0700odd.8.pdb is missing. + run_tests: C0700odd.F.pdb is missing. + run_tests: C0700odd.E.pdb is missing. run_tests: C0700odd.5.pdb is missing. + run_tests: C0700odd.log DIFFERS over about 204 lines. + run_tests: C0700odd.9.pdb is missing. run_tests: C0700odd.6.pdb is missing. + run_tests: C0700odd.2.pdb is missing. + run_tests: C0700odd.7.pdb is missing. + run_tests: C0700odd.B.pdb is missing. run_tests: C0700odd.4.pdb is missing. - run_tests: C0700odd.3.pdb is missing. run_tests: C0700odd.D.pdb is missing. + run_tests: C0700odd.C.pdb is missing. + run_tests: C0700odd.8.pdb is missing. run_tests: C0740multipdb... run_tests: C0740multipdb.log DIFFERS over about 45 lines. run_tests: C0800matrices... @@ -5021,427 +5056,427 @@ creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9 creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/_champ.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/startup/apbs_tools.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/startup -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/fedora.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/fedora.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glu copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glu/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glu creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/gl copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/gl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/gl -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/glut/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/opengl/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/_cmd.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/contrib copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/contrib/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/contrib -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/_cmd.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol -creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2 +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy +creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/_champ.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax creating /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-2.4.0+dfsg/.pybuild/cpython3_3.9_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/util.py to util.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/realtime.py to realtime.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/state.py to state.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/commands.py to commands.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/lst.py to lst.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mae.py to mae.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/brick.py to brick.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bonds.py to bonds.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/pkl.py to pkl.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/water_amber.py to water_amber.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mass.py to mass.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/amber99.py to amber99.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/assign.py to assign.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/sdf.py to sdf.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/pdb.py to pdb.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/hetatm.py to hetatm.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mol.py to mol.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/realtime.py to realtime.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/state.py to state.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/amber.py to amber.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/keyword.py to keyword.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_amber.py to protein_amber.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/map.py to map.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/io.py to io.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cpv.py to cpv.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf/io.py to io.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/dictdb.py to dictdb.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/water_residues.py to water_residues.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/gamess1.py to gamess1.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmd.py to mmd.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/solvate.py to solvate.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_residues.py to protein_residues.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/charge.py to charge.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/models.py to models.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/arc.py to arc.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein.py to protein.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/place.py to place.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/xyz.py to xyz.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mol2.py to mol2.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/neighbor.py to neighbor.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/gms.py to gms.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cc1.py to cc1.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bond_amber.py to bond_amber.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cif.py to cif.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2/cmd2.py to cmd2.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/startup/apbs_tools.py to apbs_tools.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/volume.py to volume.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/Setting.py to Setting.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/Demo.py to Demo.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/volume.py to volume.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/querying.py to querying.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/commanding.py to commanding.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/fedora.py to fedora.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/Setting.py to Setting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/Demo.py to Demo.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/completing.py to completing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/editor.py to editor.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/cmd.py to cmd.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/selecting.py to selecting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/colorprinting.py to colorprinting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/selector.py to selector.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/setting.py to setting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/__main__.py to __main__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/label.py to label.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/density.py to density.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/openvr.py to openvr.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/annotation.py to annotation.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/message.py to message.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/command.py to command.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/renaming.py to renaming.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/charge.py to charge.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/security.py to security.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/dragging.py to dragging.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/command.py to command.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/demo.py to demo.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/distance.py to distance.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/filter.py to filter.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/charge.py to charge.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/measurement.py to measurement.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/box.py to box.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/annotation.py to annotation.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/measurement.py to measurement.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/renaming.py to renaming.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/openvr.py to openvr.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/density.py to density.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/filter.py to filter.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/demo.py to demo.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/security.py to security.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/toggle.py to toggle.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/box.py to box.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/fedora.py to fedora.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/message.py to message.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizard/appearance.py to appearance.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/__main__.py to __main__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/selector.py to selector.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/xwin.py to xwin.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/seqalign.py to seqalign.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/moving.py to moving.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/parser.py to parser.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/querying.py to querying.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/installation.py to installation.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/repository.py to repository.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/managergui.py to managergui.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/util.py to util.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/internal.py to internal.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/viewing.py to viewing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/cgo.py to cgo.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/lazyio.py to lazyio.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt/utils.py to utils.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glu/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/gl/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/glut/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/opengl/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/shortcut.py to shortcut.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/fitting.py to fitting.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/seqalign.py to seqalign.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/keyboard.py to keyboard.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/_gui.py to _gui.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/checking.py to checking.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/monitoring.py to monitoring.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/colorramping.py to colorramping.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/api.py to api.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/importing.py to importing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/externing.py to externing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/cmd.py to cmd.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/computing.py to computing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/util.py to util.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/invocation.py to invocation.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/constants.py to constants.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/diagnosing.py to diagnosing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/povray.py to povray.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/controlling.py to controlling.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/constants_palette.py to constants_palette.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/shortcut.py to shortcut.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/exporting.py to exporting.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/gui.py to gui.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/menu.py to menu.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/experimenting.py to experimenting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/api.py to api.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/contrib/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/feedingback.py to feedingback.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/completing.py to completing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/preset.py to preset.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/internal.py to internal.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/morphing.py to morphing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/editor.py to editor.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/installation.py to installation.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/repository.py to repository.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/managergui.py to managergui.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/controlling.py to controlling.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/diagnosing.py to diagnosing.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/wizarding.py to wizarding.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/setting.py to setting.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/creating.py to creating.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/morphing.py to morphing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/callback.py to callback.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/movie.py to movie.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/importing.py to importing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/colorramping.py to colorramping.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/checking.py to checking.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/monitoring.py to monitoring.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/experimenting.py to experimenting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/externing.py to externing.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/commanding.py to commanding.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/editing.py to editing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/povray.py to povray.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt/utils.py to utils.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/Qt/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/locking.py to locking.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/lazyio.py to lazyio.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/viewing.py to viewing.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/keywords.py to keywords.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/helping.py to helping.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/callback.py to callback.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/invocation.py to invocation.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/preset.py to preset.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/headering.py to headering.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/parsing.py to parsing.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/xray.py to xray.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/rpc.py to rpc.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/cgo.py to cgo.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/colorprinting.py to colorprinting.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/movie.py to movie.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/selecting.py to selecting.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/exporting.py to exporting.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/vfont.py to vfont.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/constants.py to constants.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/parser.py to parser.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/headering.py to headering.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2/cmd2.py to cmd2.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol2/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/volume.py to volume.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/python.py to python.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/keyboard.py to keyboard.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/helping.py to helping.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/feedingback.py to feedingback.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/xwin.py to xwin.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/menu.py to menu.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/fitting.py to fitting.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/creating.py to creating.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/rpc.py to rpc.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/xray.py to xray.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol/_gui.py to _gui.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/charge.py to charge.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/neighbor.py to neighbor.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mol2.py to mol2.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/pdb.py to pdb.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/gamess1.py to gamess1.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/hetatm.py to hetatm.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/sdf.py to sdf.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/xyz.py to xyz.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/io.py to io.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fast/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf/io.py to io.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/models.py to models.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/place.py to place.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bonds.py to bonds.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cpv.py to cpv.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mass.py to mass.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_residues.py to protein_residues.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cif.py to cif.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/pkl.py to pkl.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/arc.py to arc.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mae.py to mae.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mmd.py to mmd.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/fragments/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/water_residues.py to water_residues.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/solvate.py to solvate.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/map.py to map.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/gms.py to gms.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/mol.py to mol.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/dictdb.py to dictdb.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein_amber.py to protein_amber.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/lst.py to lst.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/cc1.py to cc1.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/protein.py to protein.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/brick.py to brick.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/amber.py to amber.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/state.py to state.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/realtime.py to realtime.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/tinker/keyword.py to keyword.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/water_amber.py to water_amber.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/state.py to state.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/util.py to util.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/realtime.py to realtime.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/commands.py to commands.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bmin/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/bond_amber.py to bond_amber.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/amber99.py to amber99.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/chempy/champ/assign.py to assign.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/builder.py to builder.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/volume.py to volume.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-39.pyc -byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/syntax/python.py to python.cpython-39.pyc +byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-39.pyc running install_egg_info Writing /build/reproducible-path/pymol-2.4.0+dfsg/debian/python3-pymol/usr/lib/python3.9/dist-packages/pymol-2.4.0.egg-info @@ -5554,8 +5589,8 @@ dpkg-gencontrol: warning: package python3-pymol: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'pymol' in '../pymol_2.4.0+dfsg-2_all.deb'. dpkg-deb: building package 'python3-pymol-dbgsym' in '../python3-pymol-dbgsym_2.4.0+dfsg-2_armhf.deb'. +dpkg-deb: building package 'pymol' in '../pymol_2.4.0+dfsg-2_all.deb'. dpkg-deb: building package 'python3-pymol' in '../python3-pymol_2.4.0+dfsg-2_armhf.deb'. dpkg-deb: building package 'pymol-data' in '../pymol-data_2.4.0+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary @@ -5565,12 +5600,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/17509/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/7351 and its subdirectories -I: Current time: Thu Jan 11 09:51:52 -12 2024 -I: pbuilder-time-stamp: 1705009912 +I: removing directory /srv/workspace/pbuilder/17509 and its subdirectories +I: Current time: Fri Jan 12 12:02:21 +14 2024 +I: pbuilder-time-stamp: 1705010541