Diff of the two buildlogs: -- --- b1/build.log 2024-01-14 22:26:54.631118465 +0000 +++ b2/build.log 2024-01-14 22:58:04.573301520 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jan 14 09:49:49 -12 2024 -I: pbuilder-time-stamp: 1705268989 +I: Current time: Sun Feb 16 18:49:56 +14 2025 +I: pbuilder-time-stamp: 1739681396 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: copying [./ncbi-blast+_2.11.0+ds-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.z7rjo63K/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.gBovwkrw/trustedkeys.kbx': General error gpgv: Signature made Mon Feb 1 02:27:36 2021 gpgv: using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2 gpgv: Can't check signature: No public key @@ -48,51 +48,82 @@ dpkg-source: info: applying fix_x86isms I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/28819/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/D01_modify_environment starting +debug: Running on ionos16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 16 04:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='3aeec63acb5847e1983d0cc70064efe4' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='28819' - PS1='# ' - PS2='> ' + INVOCATION_ID=c1ec26666f5c4b84888cfc0650290fdb + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=103896 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OW0B0IKW/pbuilderrc_YSg0 --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OW0B0IKW/b1 --logfile b1/build.log ncbi-blast+_2.11.0+ds-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OW0B0IKW/pbuilderrc_JgUu --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OW0B0IKW/b2 --logfile b2/build.log ncbi-blast+_2.11.0+ds-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos2-i386 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Mar 27 2022 bash @@ -152,7 +183,7 @@ -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jan 7 09:24 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 16 04:50 sh -> /bin/bash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Jan 20 2022 su @@ -178,7 +209,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/28819/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -312,7 +343,7 @@ Get: 76 http://deb.debian.org/debian bullseye/main i386 libpcre3-dev i386 2:8.39-13 [656 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 time i386 1.9-0.1 [50.9 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2+deb11u2 [194 kB] -Fetched 44.0 MB in 24s (1846 kB/s) +Fetched 44.0 MB in 1s (64.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17763 files and directories currently installed.) @@ -575,8 +606,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Jan 14 21:50:53 UTC 2024. -Universal Time is now: Sun Jan 14 21:50:53 UTC 2024. +Local time is now: Sun Feb 16 04:50:23 UTC 2025. +Universal Time is now: Sun Feb 16 04:50:23 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... @@ -648,7 +679,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-blast+_2.11.0+ds-1_source.changes +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-blast+_2.11.0+ds-1_source.changes dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.11.0+ds-1 dpkg-buildpackage: info: source distribution unstable @@ -680,78 +715,78 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found -/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objects/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.in: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.sources: Not a directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.cmd: Not a directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.sh: Not a directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:148: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -782,8 +817,8 @@ checking TeamCity build number... none checking Subversion revision... unknown checking NCBI stable components' version... unknown -checking build system type... i686-pc-linux-gnu -checking host system type... i686-pc-linux-gnu +checking build system type... x86_64-pc-linux-gnu +checking host system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking for gcc... gcc checking whether the C compiler works... yes @@ -795,7 +830,7 @@ checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E -checking for i686-pc-linux-gnu-gcc... no +checking for x86_64-pc-linux-gnu-gcc... no checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes @@ -1302,195 +1337,195 @@ configure: ...done configure: updating cache config.cache configure: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/config.status -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/Makefile -config.status: creating 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/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdbxx/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/bitset/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/creaders/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/grpc_integration/Makefile -config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/db/sqlite/Makefile +config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/db/Makefile config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/./Makefile config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc/common/ncbi_build_ver.h config.status: creating /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/common/ncbi_revision.h @@ -1507,7 +1542,7 @@ /bin/ln -f run_with_lock /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/run_with_lock make[3]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/helpers' make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/helpers' -project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/Linux32/4.8.1/project_tree_builder +project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/Linux64/4.8.1/project_tree_builder Will build project_tree_builder locally ********************************************************************** Building project_tree_builder @@ -5492,869 +5527,934 @@ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds' cd c++/BUILD/build && \ - make -j8 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" + make -j15 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -/usr/bin/make -w -j8 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET= +/usr/bin/make -w -j15 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET= make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[3]: warning: -j8 forced in submake: resetting jobserver mode. -cd corelib/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd util/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd serial/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd serial/datatool/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[3]: warning: -j15 forced in submake: resetting jobserver mode. +cd corelib/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd util/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd serial/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd serial/datatool/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd util/tables/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd util/tables/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd connect/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -cd connect/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/core/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -cd algo/blast/core/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/sequtil/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/blast/services/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objmgr/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objtools/logging/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objtools/readers/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objmgr/util/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -cd util/sequtil/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +cd objtools/seqmasks_io/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. -cd objtools/blast/services/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -cd objmgr/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objtools/logging/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -cd objtools/readers/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. -cd objmgr/util/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd algo/blast/dbindex/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/dustmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. +cd algo/winmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. -cd objtools/seqmasks_io/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/dbindex/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd algo/dustmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +cd objtools/alnmgr/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/compress/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -cd algo/winmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. -cd objtools/alnmgr/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd algo/blast/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd util/compress/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +cd connect/services/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd cgi/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' /usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd connect/services/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd html/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. +cd objtools/align_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' /usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd cgi/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/blastinput/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. -cd html/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/align_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/xregexp/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +cd objtools/edit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd objtools/cleanup/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +cd objtools/format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/blastinput/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' /usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +cd algo/blast/format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd util/xregexp/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -cd objtools/edit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/cleanup/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +cd algo/blast/igblast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. +cd objtools/simple/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -cd objtools/format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. -cd algo/blast/format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -cd algo/blast/igblast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/simple/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' make[4]: Nothing to be done for 'sources'. -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/dustmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd app/dustmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/segmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/segmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -cd algo/segmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd app/winmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -cd app/segmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -cd app/winmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +cd objmgr/split/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd objmgr/split/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Nothing to be done for 'sources'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Nothing to be done for 'sources'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j8 --jobserver-auth=9,10 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. make[4]: Nothing to be done for 'sources'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd corelib/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +cd util/tables/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd objtools/logging/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Nothing to be done for 'sources'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j15 --jobserver-auth=9,10 all +cd corelib/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Nothing to be done for 'sources'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd util/tables/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker -w -j8 --jobserver-auth=9,10 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker -w -j15 --jobserver-auth=9,10 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/legacy_blast.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/tables TMPL=tables -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging TMPL=logging -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j8 --jobserver-auth=9,10 all -cd objtools/logging/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/tables TMPL=tables -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -cd util/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+dsmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd connect/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+dsmake[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j15 --jobserver-auth=9,10 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +cd util/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +cd connect/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/sequtil/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging TMPL=logging -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +cd html/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd corelib/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/xregexp/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) | ^~~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html TMPL=html -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/update_blastdb.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect TMPL=xconnect -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/.#lock-map. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) | ^~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/update_blastdb.pl +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j8 --jobserver-auth=9,10 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j15 --jobserver-auth=9,10 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -cd util/sequtil/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +cd serial/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd util/compress/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/node.cpp -o node.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/html.cpp -o html.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/page.cpp -o page.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/pager.cpp -o pager.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/selection.cpp -o selection.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +cd cgi/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect TMPL=xconnect -w -j8 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/.#lock-map. -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mapIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd.h:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd_stub.c:33: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] @@ -6363,30 +6463,31 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil TMPL=sequtil -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:76: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 47 | eNcbiCred_MbedTls = 0xC12CC16C - | ^~~~~~~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/get_species_taxids.sh -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j8 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial TMPL=serial -w -j15 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': @@ -6408,8 +6509,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' 63 | METACONN_LOG(34, eLOG_Error, | ^~~~~~~~~~~~ -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi TMPL=cgi -w -j15 --jobserver-auth=7,8 all /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6429,277 +6529,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' 92 | METACONN_LOG(33, eLOG_Error, | ^~~~~~~~~~~~ -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c:153:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 153 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j8 --jobserver-auth=9,10 all -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:527:9: note: in expansion of macro 'CORE_LOGF_X' - 527 | CORE_LOGF_X(112, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:566:9: note: in expansion of macro 'CORE_DATAF_X' - 566 | CORE_DATAF_X(109, level, data, size, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:598:9: note: in expansion of macro 'CORE_LOGF_X' - 598 | CORE_LOGF_X(113, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:606:9: note: in expansion of macro 'CORE_LOGF_X' - 606 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:899:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (* volatile)(void)'} [-Wformat=] - 899 | sprintf(buf, "%p()", s_SSLSetup); - | ~^ ~~~~~~~~~~ - | | | - | | FSSLSetup {aka const struct SOCKSSL_struct * (* volatile)(void)} - | void * -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:903:13: note: in expansion of macro 'CORE_LOGF' - 903 | CORE_LOGF(eLOG_Critical, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:911:13: note: in expansion of macro 'CORE_LOG' - 911 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1066:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' - 1066 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1075:13: note: in expansion of macro 'CORE_LOGF_X' - 1075 | CORE_LOGF_X(104, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1215:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1215 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1254:9: note: in expansion of macro 'CORE_LOGF_X' - 1254 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1282:9: note: in expansion of macro 'CORE_LOGF_X' - 1282 | CORE_LOGF_X(155, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1413:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1413 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1447:9: note: in expansion of macro 'CORE_LOGF_X' - 1447 | CORE_LOGF_X(10, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1581:13: note: in expansion of macro 'CORE_LOGF_X' - 1581 | CORE_LOGF_X(111, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of mamake[5]: warning: -j8 forced in submake: resetting jobserver mode. -cro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1706:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1706 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/.#lock-map. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api TMPL=compress -w -j15 --jobserver-auth=7,8 all +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:76: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 47 | eNcbiCred_MbedTls = 0xC12CC16C + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 47 | eNcbiCred_MbedTls = 0xC12CC16C + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': @@ -6730,21 +6569,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1835:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1835 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6803,22 +6627,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:395:9: note: in expansion of macro 'CONN_LOG' 395 | CONN_LOG(5, Open, eLOG_Error, "Failed to open connection"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1979:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1979 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6890,6 +6698,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:459:5: note: in expansion of macro 'CONN_NOT_NULL' 459 | CONN_NOT_NULL(1, ReInit); | ^~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6918,21 +6734,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2124:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2124 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7013,6 +6814,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:488:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 488 | CONN_NOT_NULL_EX(30, GetPosition, 0); | ^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7037,7 +6841,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' +/build/reproducimake[5]: warning: -j15 forced in submake: resetting jobserver mode. +ble-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' @@ -7101,7 +6906,34 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:517:5: note: in expansion of macro 'CONN_NOT_NULL' 517 | CONN_NOT_NULL(8, SetTimeout); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_util.c:153:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 153 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd.h:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_host_info.c:33: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/get_species_taxids.sh +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7190,51 +7022,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2698:13: note: in expansion of macro 'CORE_LOGF' - 2698 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2708:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2708 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2746:25: note: in expansion of macro 'CORE_LOGF' - 2746 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -7314,22 +7101,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:655:9: note: in expansion of macro 'CONN_LOG' 655 | CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level, | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2900:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2900 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7373,6 +7144,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:719:13: note: in expansion of macro 'CONN_LOG' 719 | CONN_LOG(17, Write, level, "Unable to write data"); | ^~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1687:9: note: in expansion of macro 'LOG_WRITE' + 1687 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, + | ^~~~~~~~~ +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7422,6 +7206,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:758:5: note: in expansion of macro 'CONN_NOT_NULL' 758 | CONN_NOT_NULL(18, Write); | ^~~~~~~~~~~~~ +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7447,6 +7232,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:792:5: note: in expansion of macro 'CONN_NOT_NULL' 792 | CONN_NOT_NULL(19, Pushback); | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7471,23 +7257,22 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:792:5: note: in expansion of macro 'CONN_NOT_NULL' 792 | CONN_NOT_NULL(19, Pushback); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3083:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3083 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1903:9: note: in expansion of macro 'CORE_LOG_X' + 1903 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7524,6 +7309,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1940:9: note: in expansion of macro 'CORE_LOGF_X' + 1940 | CORE_LOGF_X(3, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:70:7: note: in expansion of macro 'CORE_LOGF_X' 70 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -7548,6 +7348,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1963:9: note: in expansion of macro 'CORE_LOGF_X' + 1963 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:70:7: note: in expansion of macro 'CORE_LOGF_X' 70 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -7557,25 +7372,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:827:9: note: in expansion of macro 'CONN_LOG' 827 | CONN_LOG(21, Flush, status == eIO_Timeout ? eLOG_Trace : eLOG_Warning, | ^~~~~~~~ -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3434:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3434 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WriteData': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read': +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7597,9 +7403,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:851:9: note: in expansion of macro 'CONN_LOG' 851 | CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3522:31: warning: ordered comparison of pointer with integer zero [-Wpedantic] - 3522 | n_written > 0 ? " [encrypt]" : 0); - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2014:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2014 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7618,10 +7436,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:893:17: note: in expansion of macro 'CONN_LOG_EX' 893 | CONN_LOG_EX(32, Read, eLOG_Critical, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7631,12 +7445,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3586:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3586 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2031:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2031 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7658,13 +7472,38 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:919:13: note: in expansion of macro 'CONN_LOG' 919 | CONN_LOG(23, Read, level, "Unable to read data"); | ^~~~~~~~ -=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARG/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2078:9: note: in expansion of macro 'CORE_LOGF_X' + 2078 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2111:9: note: in expansion of macro 'CORE_LOG_X' + 2111 | CORE_LOG_X(9, eLOG_Error, + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7689,6 +7528,29 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:966:5: note: in expansion of macro 'CONN_NOT_NULL' 966 | CONN_NOT_NULL(24, Read); | ^~~~~~~~~~~~~ +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2153:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2153 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +EFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/make[6]: warning: -j15 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7762,10 +7624,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:1014:5: note: in expansion of macro 'CONN_NOT_NULL' 1014 | CONN_NOT_NULL(25, ReadLine); | ^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 47 | eNcbiCred_MbedTls = 0xC12CC16C - | ^~~~~~~~~~ +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7785,52 +7644,6 @@ 1061 | CONN_LOG_EX(35, ReadLine, eLOG_Critical, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Status': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3760:21: note: in expansion of macro 'CORE_LOGF_X' - 3760 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3796:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3796 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3847:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3847 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7879,6 +7692,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:1080:5: note: in expansion of macro 'CONN_NOT_NULL' 1080 | CONN_NOT_NULL(26, Status); | ^~~~~~~~~~~~~ +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Close': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7904,37 +7720,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:1126:5: note: in expansion of macro 'CONN_NOT_NULL' 1126 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3928:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3928 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3944:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3944 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8014,36 +7799,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4006:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4006 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4046:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4046 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -8056,8 +7811,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:1152:9: note: in expansion of macro 'CONN_LOG_EX' 1152 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectio.cpp -o objectio.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8094,21 +7855,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4150:13: note: in expansion of macro 'CORE_LOGF_X' - 4150 | CORE_LOGF_X(142, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:70:7: note: in expansion of macro 'CORE_LOGF_X' 70 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ @@ -8121,14 +7867,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connection.c:1173:5: note: in expansion of macro 'CONN_NOT_NULL' 1173 | CONN_NOT_NULL(36, GetSOCK); | ^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8141,116 +7882,136 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4175:13: note: in expansion of macro 'CORE_LOGF_X' - 4175 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:416:13: note: in expansion of macro 'SENDMAIL_RETURN' + 416 | SENDMAIL_RETURN(3, "Recipient address is too long"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4201:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4201 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:419:13: note: in expansion of macro 'CORE_LOGF_X' + 419 | CORE_LOGF_X(1, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4263:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4263 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:427:13: note: in expansion of macro 'SENDMAIL_RETURN' + 427 | SENDMAIL_RETURN(4, write_error); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4274:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4274 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:431:13: note: in expansion of macro 'SENDMAIL_RETURN2' + 431 | SENDMAIL_RETURN2(5, proto_error, buf); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4319:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4319 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:486:9: note: in expansion of macro 'SENDMAIL_RETURN' + 486 | SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: Invalid magic"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4367:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4367 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:491:9: note: in expansion of macro 'SENDMAIL_RETURN' + 491 | SENDMAIL_RETURN(7, "At least one message recipient must be specified"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4409:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4409 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:501:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 501 | SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4517:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4517 | CORE_LOGF_ERRNO_X(27, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 509 | SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8263,24 +8024,30 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4579:9: note: in expansion of macro 'CORE_LOGF_X' - 4579 | CORE_LOGF_X(47, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro 'SENDMAIL_RETURN' + 514 | SENDMAIL_RETURN(10, "Unable to get local host name"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4637:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4637 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN' + 519 | SENDMAIL_RETURN(11, "Write error in HELO command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8293,54 +8060,74 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4681:17: note: in expansion of macro 'CORE_LOGF_X' - 4681 | CORE_LOGF_X(48, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 522 | SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4730:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4730 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro 'SENDMAIL_RETURN' + 527 | SENDMAIL_RETURN(13, "Write error in MAIL command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4747:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4747 | CORE_LOGF_ERRNO_X(49, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 530 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); + | ^~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast -w -j15 --jobserver-auth=9,10 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4834:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4834 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro 'SENDMAIL_RETURN' + 551 | SENDMAIL_RETURN(15, "Write error in DATA command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8350,55 +8137,51 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4856:17: note: in expansion of macro 'CORE_LOGF' - 4856 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 553 | SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4885:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4885 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1687:9: note: in expansion of macro 'LOG_WRITE' - 1687 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro 'SENDMAIL_RETURN' + 584 | SENDMAIL_RETURN(32, "Write error in sending Date"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4896:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4896 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro 'SENDMAIL_RETURN' + 591 | SENDMAIL_RETURN(33, "Write error in sending From"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8408,27 +8191,44 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1903:9: note: in expansion of macro 'CORE_LOG_X' - 1903 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro 'SENDMAIL_RETURN' + 599 | SENDMAIL_RETURN(17, "Write error in sending Subject"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4919:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4919 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro 'SENDMAIL_RETURN' + 606 | SENDMAIL_RETURN(18, "Write error in sending To"); + | ^~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8441,8 +8241,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1940:9: note: in expansion of macro 'CORE_LOGF_X' - 1940 | CORE_LOGF_X(3, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:527:9: note: in expansion of macro 'CORE_LOGF_X' + 527 | CORE_LOGF_X(112, level, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8450,15 +8250,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4937:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4937 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:566:9: note: in expansion of macro 'CORE_DATAF_X' + 566 | CORE_DATAF_X(109, level, data, size, + | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8471,10 +8271,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:1963:9: note: in expansion of macro 'CORE_LOGF_X' - 1963 | CORE_LOGF_X(4, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:598:9: note: in expansion of macro 'CORE_LOGF_X' + 598 | CORE_LOGF_X(113, level, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8487,54 +8286,49 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5011:13: note: in expansion of macro 'CORE_LOGF_X' - 5011 | CORE_LOGF_X(144, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2014:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2014 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:606:9: note: in expansion of macro 'CORE_LOGF_X' + 606 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:899:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (* volatile)(void)'} [-Wformat=] + 899 | sprintf(buf, "%p()", s_SSLSetup); + | ~^ ~~~~~~~~~~ + | | | + | | FSSLSetup {aka const struct SOCKSSL_struct * (* volatile)(void)} + | void * +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2031:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2031 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:903:13: note: in expansion of macro 'CORE_LOGF' + 903 | CORE_LOGF(eLOG_Critical, + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5053:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5053 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:911:13: note: in expansion of macro 'CORE_LOG' + 911 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8547,10 +8341,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2078:9: note: in expansion of macro 'CORE_LOGF_X' - 2078 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro 'SENDMAIL_RETURN' + 613 | SENDMAIL_RETURN(19, "Write error in sending Cc"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8563,8 +8359,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2111:9: note: in expansion of macro 'CORE_LOG_X' - 2111 | CORE_LOG_X(9, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro 'CORE_LOG_X' + 617 | CORE_LOG_X(2, eLOG_Warning, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8572,91 +8368,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connutil.c:2153:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2153 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5099:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5099 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5154:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5154 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5175:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5175 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5245:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5245 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5312:9: note: in expansion of macro 'CORE_LOGF_X' - 5312 | CORE_LOGF_X(115, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro 'SENDMAIL_RETURN' + 628 | SENDMAIL_RETURN(20, "Write error in sending mailer information"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8669,58 +8392,64 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5349:9: note: in expansion of macro 'CORE_LOGF_X' - 5349 | CORE_LOGF_X(39, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro 'SENDMAIL_RETURN' + 656 | SENDMAIL_RETURN(21, "Write error while sending custom header"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5405:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5405 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN2' + 665 | SENDMAIL_RETURN2(22, error, buffer); + | ^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:42: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5464:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5464 | CORE_LOGF_ERRNO_EXX(41, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:107:9: note: in expansion of macro 'CORE_LOGF_X' + 107 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' - \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5521:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5521 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:140:13: note: in expansion of macro 'CORE_LOGF_X' + 140 | CORE_LOGF_X(8, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8730,27 +8459,28 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5532:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5532 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1066:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' + 1066 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5543:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5543 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1075:13: note: in expansion of macro 'CORE_LOGF_X' + 1075 | CORE_LOGF_X(104, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8763,10 +8493,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5563:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5563 | CORE_LOGF_ERRNO_EXX(128, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1215:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1215 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8779,25 +8509,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5615:9: note: in expansion of macro 'CORE_LOGF_X' - 5615 | CORE_LOGF_X(44, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5641:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5641 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN' + 668 | SENDMAIL_RETURN(23, "Write error in finalizing custom header"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8810,50 +8527,49 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5727:17: note: in expansion of macro 'CORE_LOGF_X' - 5727 | CORE_LOGF_X(20, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro 'SENDMAIL_RETURN' + 677 | SENDMAIL_RETURN(24, "Write error in message body delimiter"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5776:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5776 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro 'SENDMAIL_RETURN' + 703 | SENDMAIL_RETURN(25, "Write error while sending message body"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5811:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 5811 | CORE_LOGF_ERRNO_X(154, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbsmd.h:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_host_info.c:33: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro 'SENDMAIL_RETURN2' + 712 | SENDMAIL_RETURN2(26, error, buffer); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8866,9 +8582,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5828:9: note: in expansion of macro 'CORE_LOGF_X' - 5828 | CORE_LOGF_X(88, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:380:13: note: in expansion of macro 'CORE_LOGF_X' + 380 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8881,9 +8597,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5837:9: note: in expansion of macro 'CORE_LOGF_X' - 5837 | CORE_LOGF_X(89, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1254:9: note: in expansion of macro 'CORE_LOGF_X' + 1254 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8896,9 +8613,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5887:17: note: in expansion of macro 'CORE_LOGF_X' - 5887 | CORE_LOGF_X(90, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1282:9: note: in expansion of macro 'CORE_LOGF_X' + 1282 | CORE_LOGF_X(155, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8911,73 +8629,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5933:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5933 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5978:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 5978 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5988:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 5988 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6000:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6000 | CORE_LOGF_ERRNO_X(29, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6010:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6010 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1413:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1413 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8990,10 +8645,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6029:13: note: in expansion of macro 'CORE_LOGF_X' - 6029 | CORE_LOGF_X(116, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1447:9: note: in expansion of macro 'CORE_LOGF_X' + 1447 | CORE_LOGF_X(10, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9006,13 +8660,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6083:9: note: in expansion of macro 'CORE_LOGF_X' - 6083 | CORE_LOGF_X(117, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro 'SENDMAIL_RETURN' + 716 | SENDMAIL_RETURN(27, "Write error while finalizing message body"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9025,10 +8678,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6307:9: note: in expansion of macro 'CORE_LOGF_X' - 6307 | CORE_LOGF_X(46, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro 'SENDMAIL_RETURN' + 719 | SENDMAIL_RETURN(28, "Write error while finalizing message"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9041,9 +8696,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6475:9: note: in expansion of macro 'CORE_LOGF_X' - 6475 | CORE_LOGF_X(52, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 724 | SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9056,27 +8714,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6485:9: note: in expansion of macro 'CORE_LOGF_X' - 6485 | CORE_LOGF_X(53, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' + 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o -/bin/rm -f libtables.so .libtables.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libtables.so -/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.tables.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro 'SENDMAIL_RETURN' + 727 | SENDMAIL_RETURN(30, "Write error in QUIT command"); + | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.c:32: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9089,10 +8741,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6497:13: note: in expansion of macro 'CORE_LOGF_X' - 6497 | CORE_LOGF_X(51, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' + 365 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 729 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9105,40 +8760,44 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6535:9: note: in expansion of macro 'CORE_LOGF_X' - 6535 | CORE_LOGF_X(54, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1581:13: note: in expansion of macro 'CORE_LOGF_X' + 1581 | CORE_LOGF_X(111, eLOG_Trace, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6542:9: note: in expansion of macro 'CORE_LOGF_X' - 6542 | CORE_LOGF_X(55, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1706:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1706 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6550:9: note: in expansion of macro 'CORE_LOGF_X' - 6550 | CORE_LOGF_X(15, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' + \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1835:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1835 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:115: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9151,11 +8810,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6692:9: note: in expansion of macro 'CORE_LOGF_X' - 6692 | CORE_LOGF_X(56, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:271:9: note: in expansion of macro 'CORE_LOGF_X' + 271 | CORE_LOGF_X(1, eLOG_Error, | ^~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -cd util/compress/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9168,9 +8825,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6720:13: note: in expansion of macro 'CORE_LOGF_X' - 6720 | CORE_LOGF_X(57, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:293:13: note: in expansion of macro 'CORE_LOGF_X' + 293 | CORE_LOGF_X(2, eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9183,9 +8841,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6734:13: note: in expansion of macro 'CORE_LOGF_X' - 6734 | CORE_LOGF_X(58, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:317:9: note: in expansion of macro 'CORE_LOGF_X' + 317 | CORE_LOGF_X(3, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9198,11 +8856,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6748:17: note: in expansion of macro 'CORE_LOGF_X' - 6748 | CORE_LOGF_X(59, eLOG_Warning, - | ^~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:327:9: note: in expansion of macro 'CORE_LOGF_X' + 327 | CORE_LOGF_X(4, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9215,42 +8872,48 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6757:17: note: in expansion of macro 'CORE_LOGF_X' - 6757 | CORE_LOGF_X(60, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:358:17: note: in expansion of macro 'CORE_LOGF_X' + 358 | CORE_LOGF_X(34, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': +_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typeref.cpp -o typeref.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typemap.cpp -o typemap.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/continfo.cpp -o continfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-p/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6767:13: note: in expansion of macro 'CORE_LOGF_X' - 6767 | CORE_LOGF_X(61, eLOG_Warning, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:42: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:1979:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1979 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:107:9: note: in expansion of macro 'CORE_LOGF_X' - 107 | CORE_LOGF_X(7, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2124:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2124 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9263,9 +8926,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:140:13: note: in expansion of macro 'CORE_LOGF_X' - 140 | CORE_LOGF_X(8, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:449:9: note: in expansion of macro 'CORE_LOGF_X' + 449 | CORE_LOGF_X(8, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9275,13 +8939,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6777:9: note: in expansion of macro 'CORE_LOGF_X' - 6777 | CORE_LOGF_X(62, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c: In function 'x_Open': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:647:9: note: in expansion of macro 'CORE_LOG_X' + 647 | CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9294,10 +8957,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c:380:13: note: in expansion of macro 'CORE_LOGF_X' - 380 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:653:9: note: in expansion of macro 'CORE_LOGF_X' + 653 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9310,10 +8972,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6907:9: note: in expansion of macro 'CORE_LOGF_X' - 6907 | CORE_LOGF_X(63, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:700:13: note: in expansion of macro 'CORE_LOGF_X' + 700 | CORE_LOGF_X(9, eLOG_Warning, + | ^~~~~~~~~~~ +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9323,13 +8986,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6948:9: note: in expansion of macro 'CORE_LOGF_X' - 6948 | CORE_LOGF_X(64, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2698:13: note: in expansion of macro 'CORE_LOGF' + 2698 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9339,12 +9002,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6990:13: note: in expansion of macro 'CORE_LOGF_X' - 6990 | CORE_LOGF_X(65, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:824:9: note: in expansion of macro 'CORE_LOG_X' + 824 | CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9357,10 +9020,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7000:9: note: in expansion of macro 'CORE_LOGF_X' - 7000 | CORE_LOGF_X(66, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:830:9: note: in expansion of macro 'CORE_LOGF_X' + 830 | CORE_LOGF_X(11, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9373,10 +9035,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7031:9: note: in expansion of macro 'CORE_LOGF_X' - 7031 | CORE_LOGF_X(125, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:843:13: note: in expansion of macro 'CORE_LOGF_X' + 843 | CORE_LOGF_X(13, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9389,10 +9050,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7107:9: note: in expansion of macro 'CORE_LOGF_X' - 7107 | CORE_LOGF_X(67, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:851:17: note: in expansion of macro 'CORE_LOGF_X' + 851 | CORE_LOGF_X(12, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9405,24 +9065,25 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7159:17: note: in expansion of macro 'CORE_LOGF_X' - 7159 | CORE_LOGF_X(68, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:863:5: note: in expansion of macro 'CORE_LOGF_X' + 863 | CORE_LOGF_X(14, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7186:13: note: in expansion of macro 'CORE_LOGF_X' - 7186 | CORE_LOGF_X(69, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2708:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2708 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9432,28 +9093,35 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro 'CORE_LOGF_X' - 7196 | CORE_LOGF_X(70, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2746:25: note: in expansion of macro 'CORE_LOGF' + 2746 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +FY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7215:9: note: in expansion of macro 'CORE_LOGF_X' - 7215 | CORE_LOGF_X(71, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:2900:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2900 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9463,13 +9131,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7222:9: note: in expansion of macro 'CORE_LOGF_X' - 7222 | CORE_LOGF_X(72, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:875:9: note: in expansion of macro 'CORE_LOG_X' + 875 | CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9482,10 +9149,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7369:9: note: in expansion of macro 'CORE_LOGF_X' - 7369 | CORE_LOGF_X(73, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:881:9: note: in expansion of macro 'CORE_LOGF_X' + 881 | CORE_LOGF_X(16, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9498,9 +9164,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7431:9: note: in expansion of macro 'CORE_LOGF_X' - 7431 | CORE_LOGF_X(158, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:900:13: note: in expansion of macro 'CORE_LOGF_X' + 900 | CORE_LOGF_X(17, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9513,25 +9179,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7438:9: note: in expansion of macro 'CORE_LOGF_X' - 7438 | CORE_LOGF_X(159, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7451 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:911:13: note: in expansion of macro 'CORE_LOGF_X' + 911 | CORE_LOGF_X(18, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9544,9 +9194,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7473:9: note: in expansion of macro 'CORE_LOGF_X' - 7473 | CORE_LOGF_X(156, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:918:13: note: in expansion of macro 'CORE_LOGF_X' + 918 | CORE_LOGF_X(19, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9559,12 +9210,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7480:9: note: in expansion of macro 'CORE_LOGF_X' - 7480 | CORE_LOGF_X(157, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:940:9: note: in expansion of macro 'CORE_LOGF_X' + 940 | CORE_LOGF_X(30, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9574,29 +9223,27 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7493:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7493 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3083:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3083 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7544:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7544 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:975:13: note: in expansion of macro 'CORE_LOGF_X' + 975 | CORE_LOGF_X(31, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9609,9 +9256,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7664:9: note: in expansion of macro 'CORE_LOGF_X' - 7664 | CORE_LOGF_X(79, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1002:9: note: in expansion of macro 'CORE_LOGF_X' + 1002 | CORE_LOGF_X(32, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'x_HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9624,43 +9272,39 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7671:9: note: in expansion of macro 'CORE_LOGF_X' - 7671 | CORE_LOGF_X(78, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1023:13: note: in expansion of macro 'CORE_LOGF_X' + 1023 | CORE_LOGF_X(28, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7689 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1036:13: note: in expansion of macro 'CORE_LOGF_X' + 1036 | CORE_LOGF_X(26, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7705:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7705 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1039:13: note: in expansion of macro 'CORE_LOGF_X' + 1039 | CORE_LOGF_X(27, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9673,8 +9317,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7734:9: note: in expansion of macro 'CORE_LOGF_X' - 7734 | CORE_LOGF_X(82, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1054:9: note: in expansion of macro 'CORE_LOGF_X' + 1054 | CORE_LOGF_X(23, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9688,9 +9332,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7741:9: note: in expansion of macro 'CORE_LOGF_X' - 7741 | CORE_LOGF_X(81, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1141:13: note: in expansion of macro 'CORE_LOGF_X' + 1141 | CORE_LOGF_X(21, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9703,9 +9347,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7760:9: note: in expansion of macro 'CORE_LOGF_X' - 7760 | CORE_LOGF_X(83, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1156:17: note: in expansion of macro 'CORE_LOGF_X' + 1156 | CORE_LOGF_X(20, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9718,9 +9362,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro 'CORE_LOGF_X' - 7773 | CORE_LOGF_X(84, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1174:13: note: in expansion of macro 'CORE_LOGF_X' + 1174 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9733,10 +9378,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7802:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7802 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3434:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3434 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WriteData': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3522:31: warning: ordered comparison of pointer with integer zero [-Wpedantic] + 3522 | n_written > 0 ? " [encrypt]" : 0); + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9749,9 +9397,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7830:9: note: in expansion of macro 'CORE_LOGF_X' - 7830 | CORE_LOGF_X(96, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1185:17: note: in expansion of macro 'CORE_LOGF_X' + 1185 | CORE_LOGF_X(24, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9761,13 +9410,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7837:9: note: in expansion of macro 'CORE_LOGF_X' - 7837 | CORE_LOGF_X(95, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1222:9: note: in expansion of macro 'CORE_LOG_X' + 1222 | CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Next': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9777,28 +9426,32 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7890:9: note: in expansion of macro 'CORE_LOGF_X' - 7890 | CORE_LOGF_X(93, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1235:9: note: in expansion of macro 'CORE_LOG_X' + 1235 | CORE_LOG_X(34, eLOG_Warning, "Heap Next: NULL heap"); + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:77: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_X' - 7897 | CORE_LOGF_X(92, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3586:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3586 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9811,9 +9464,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7934:9: note: in expansion of macro 'CORE_LOGF_X' - 7934 | CORE_LOGF_X(87, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1323:9: note: in expansion of macro 'CORE_LOGF_X' + 1323 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9826,10 +9480,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7941:9: note: in expansion of macro 'CORE_LOGF_X' - 7941 | CORE_LOGF_X(86, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3760:21: note: in expansion of macro 'CORE_LOGF_X' + 3760 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9842,71 +9498,70 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7973:9: note: in expansion of macro 'CORE_LOGF_X' - 7973 | CORE_LOGF_X(98, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X' + 171 | CORE_LOGF_X(33, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7980:9: note: in expansion of macro 'CORE_LOGF_X' - 7980 | CORE_LOGF_X(97, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3796:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3796 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8000:9: note: in expansion of macro 'CORE_LOGF_X' - 8000 | CORE_LOGF_X(99, eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api TMPL=compress -w -j8 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3847:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3847 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8018:9: note: in expansion of macro 'CORE_LOGF_X' - 8018 | CORE_LOGF_X(101, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3928:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3928 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8025:9: note: in expansion of macro 'CORE_LOGF_X' - 8025 | CORE_LOGF_X(100, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:3944:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3944 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9919,10 +9574,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8045:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8045 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4006:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4006 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9935,10 +9589,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8207:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8207 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4046:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4046 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9948,16 +9602,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8596:13: note: in expansion of macro 'CORE_LOGF' - 8596 | CORE_LOGF(eLOG_Critical, ("%s reset SSL while it is in use",verb)); - | ^~~~~~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4150:13: note: in expansion of macro 'CORE_LOGF_X' + 4150 | CORE_LOGF_X(142, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9970,136 +9620,116 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:416:13: note: in expansion of macro 'SENDMAIL_RETURN' - 416 | SENDMAIL_RETURN(3, "Recipient address is too long"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4175:13: note: in expansion of macro 'CORE_LOGF_X' + 4175 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:419:13: note: in expansion of macro 'CORE_LOGF_X' - 419 | CORE_LOGF_X(1, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4201:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4201 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:427:13: note: in expansion of macro 'SENDMAIL_RETURN' - 427 | SENDMAIL_RETURN(4, write_error); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4263:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4263 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:431:13: note: in expansion of macro 'SENDMAIL_RETURN2' - 431 | SENDMAIL_RETURN2(5, proto_error, buf); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4274:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4274 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:486:9: note: in expansion of macro 'SENDMAIL_RETURN' - 486 | SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: Invalid magic"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4319:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4319 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:491:9: note: in expansion of macro 'SENDMAIL_RETURN' - 491 | SENDMAIL_RETURN(7, "At least one message recipient must be specified"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4367:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4367 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:501:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 501 | SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4409:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4409 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 509 | SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4517:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4517 | CORE_LOGF_ERRNO_X(27, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10112,30 +9742,28 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4579:9: note: in expansion of macro 'CORE_LOGF_X' + 4579 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro 'SENDMAIL_RETURN' - 514 | SENDMAIL_RETURN(10, "Unable to get local host name"); - | ^~~~~~~~~~~~~~~ +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN' - 519 | SENDMAIL_RETURN(11, "Write error in HELO command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4637:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4637 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10148,66 +9776,54 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 522 | SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4681:17: note: in expansion of macro 'CORE_LOGF_X' + 4681 | CORE_LOGF_X(48, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro 'SENDMAIL_RETURN' - 527 | SENDMAIL_RETURN(13, "Write error in MAIL command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4730:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4730 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 530 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4747:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4747 | CORE_LOGF_ERRNO_X(49, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro 'SENDMAIL_RETURN' - 551 | SENDMAIL_RETURN(15, "Write error in DATA command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4834:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4834 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10217,87 +9833,73 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 553 | SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4856:17: note: in expansion of macro 'CORE_LOGF' + 4856 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro 'SENDMAIL_RETURN' - 584 | SENDMAIL_RETURN(32, "Write error in sending Date"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4885:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4885 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro 'SENDMAIL_RETURN' - 591 | SENDMAIL_RETURN(33, "Write error in sending From"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4896:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4896 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro 'SENDMAIL_RETURN' - 599 | SENDMAIL_RETURN(17, "Write error in sending Subject"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4919:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4919 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro 'SENDMAIL_RETURN' - 606 | SENDMAIL_RETURN(18, "Write error in sending To"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:4937:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4937 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10310,99 +9912,93 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro 'SENDMAIL_RETURN' - 613 | SENDMAIL_RETURN(19, "Write error in sending Cc"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5011:13: note: in expansion of macro 'CORE_LOGF_X' + 5011 | CORE_LOGF_X(144, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o +/bin/rm -f libtables.so .libtables.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libtables.so +/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.tables.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro 'CORE_LOG_X' - 617 | CORE_LOG_X(2, eLOG_Warning, - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5053:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5053 | CORE_LOGF_ERRNO_EXX(34, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro 'SENDMAIL_RETURN' - 628 | SENDMAIL_RETURN(20, "Write error in sending mailer information"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5099:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5099 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro 'SENDMAIL_RETURN' - 656 | SENDMAIL_RETURN(21, "Write error while sending custom header"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5154:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5154 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN2' - 665 | SENDMAIL_RETURN2(22, error, buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5175:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5175 | CORE_LOGF_ERRNO_EXX(150, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN' - 668 | SENDMAIL_RETURN(23, "Write error in finalizing custom header"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5245:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5245 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10415,12 +10011,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5312:9: note: in expansion of macro 'CORE_LOGF_X' + 5312 | CORE_LOGF_X(115, eLOG_Note, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro 'SENDMAIL_RETURN' - 677 | SENDMAIL_RETURN(24, "Write error in message body delimiter"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10433,130 +10027,104 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5349:9: note: in expansion of macro 'CORE_LOGF_X' + 5349 | CORE_LOGF_X(39, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro 'SENDMAIL_RETURN' - 703 | SENDMAIL_RETURN(25, "Write error while sending message body"); - | ^~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro 'SENDMAIL_RETURN2' - 712 | SENDMAIL_RETURN2(26, error, buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5405:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5405 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro 'SENDMAIL_RETURN' - 716 | SENDMAIL_RETURN(27, "Write error while finalizing message body"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5464:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5464 | CORE_LOGF_ERRNO_EXX(41, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro 'SENDMAIL_RETURN' - 719 | SENDMAIL_RETURN(28, "Write error while finalizing message"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5521:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5521 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 724 | SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5532:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5532 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:348:9: note: in expansion of macro 'CORE_LOGF_X' - 348 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro 'SENDMAIL_RETURN' - 727 | SENDMAIL_RETURN(30, "Write error in QUIT command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5543:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5543 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:365:9: note: in expansion of macro 'CORE_LOGF_X' - 365 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 729 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); - | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:115: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5563:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5563 | CORE_LOGF_ERRNO_EXX(128, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10569,8 +10137,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:271:9: note: in expansion of macro 'CORE_LOGF_X' - 271 | CORE_LOGF_X(1, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5615:9: note: in expansion of macro 'CORE_LOGF_X' + 5615 | CORE_LOGF_X(44, eLOG_Note, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -10578,16 +10146,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:293:13: note: in expansion of macro 'CORE_LOGF_X' - 293 | CORE_LOGF_X(2, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5641:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5641 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10600,9 +10171,40 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:317:9: note: in expansion of macro 'CORE_LOGF_X' - 317 | CORE_LOGF_X(3, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5727:17: note: in expansion of macro 'CORE_LOGF_X' + 5727 | CORE_LOGF_X(20, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5776:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5776 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5811:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 5811 | CORE_LOGF_ERRNO_X(154, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10615,10 +10217,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:327:9: note: in expansion of macro 'CORE_LOGF_X' - 327 | CORE_LOGF_X(4, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5828:9: note: in expansion of macro 'CORE_LOGF_X' + 5828 | CORE_LOGF_X(88, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10631,10 +10232,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:358:17: note: in expansion of macro 'CORE_LOGF_X' - 358 | CORE_LOGF_X(34, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5837:9: note: in expansion of macro 'CORE_LOGF_X' + 5837 | CORE_LOGF_X(89, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10647,86 +10247,86 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:449:9: note: in expansion of macro 'CORE_LOGF_X' - 449 | CORE_LOGF_X(8, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5887:17: note: in expansion of macro 'CORE_LOGF_X' + 5887 | CORE_LOGF_X(90, eLOG_Error, + | ^~~~~~~~~~~ +/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:647:9: note: in expansion of macro 'CORE_LOG_X' - 647 | CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5933:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5933 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:653:9: note: in expansion of macro 'CORE_LOGF_X' - 653 | CORE_LOGF_X(7, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5978:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 5978 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:700:13: note: in expansion of macro 'CORE_LOGF_X' - 700 | CORE_LOGF_X(9, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:5988:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 5988 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:824:9: note: in expansion of macro 'CORE_LOG_X' - 824 | CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6000:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6000 | CORE_LOGF_ERRNO_X(29, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:830:9: note: in expansion of macro 'CORE_LOGF_X' - 830 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6010:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6010 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10739,9 +10339,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:843:13: note: in expansion of macro 'CORE_LOGF_X' - 843 | CORE_LOGF_X(13, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6029:13: note: in expansion of macro 'CORE_LOGF_X' + 6029 | CORE_LOGF_X(116, eLOG_Note, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10754,9 +10355,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:851:17: note: in expansion of macro 'CORE_LOGF_X' - 851 | CORE_LOGF_X(12, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6083:9: note: in expansion of macro 'CORE_LOGF_X' + 6083 | CORE_LOGF_X(117, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10769,10 +10371,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:863:5: note: in expansion of macro 'CORE_LOGF_X' - 863 | CORE_LOGF_X(14, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6307:9: note: in expansion of macro 'CORE_LOGF_X' + 6307 | CORE_LOGF_X(46, eLOG_Error, + | ^~~~~~~~~~~ +inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/c/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10782,12 +10390,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:875:9: note: in expansion of macro 'CORE_LOG_X' - 875 | CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6475:9: note: in expansion of macro 'CORE_LOGF_X' + 6475 | CORE_LOGF_X(52, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10800,8 +10408,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:881:9: note: in expansion of macro 'CORE_LOGF_X' - 881 | CORE_LOGF_X(16, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6485:9: note: in expansion of macro 'CORE_LOGF_X' + 6485 | CORE_LOGF_X(53, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -10815,9 +10423,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:900:13: note: in expansion of macro 'CORE_LOGF_X' - 900 | CORE_LOGF_X(17, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6497:13: note: in expansion of macro 'CORE_LOGF_X' + 6497 | CORE_LOGF_X(51, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10830,9 +10439,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:911:13: note: in expansion of macro 'CORE_LOGF_X' - 911 | CORE_LOGF_X(18, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6535:9: note: in expansion of macro 'CORE_LOGF_X' + 6535 | CORE_LOGF_X(54, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10845,10 +10454,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:918:13: note: in expansion of macro 'CORE_LOGF_X' - 918 | CORE_LOGF_X(19, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6542:9: note: in expansion of macro 'CORE_LOGF_X' + 6542 | CORE_LOGF_X(55, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10861,9 +10469,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:940:9: note: in expansion of macro 'CORE_LOGF_X' - 940 | CORE_LOGF_X(30, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6550:9: note: in expansion of macro 'CORE_LOGF_X' + 6550 | CORE_LOGF_X(15, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10876,564 +10485,152 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:975:13: note: in expansion of macro 'CORE_LOGF_X' - 975 | CORE_LOGF_X(31, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1002:9: note: in expansion of macro 'CORE_LOGF_X' - 1002 | CORE_LOGF_X(32, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'x_HEAP_Walk': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1023:13: note: in expansion of macro 'CORE_LOGF_X' - 1023 | CORE_LOGF_X(28, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1036:13: note: in expansion of macro 'CORE_LOGF_X' - 1036 | CORE_LOGF_X(26, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1039:13: note: in expansion of macro 'CORE_LOGF_X' - 1039 | CORE_LOGF_X(27, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1054:9: note: in expansion of macro 'CORE_LOGF_X' - 1054 | CORE_LOGF_X(23, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1141:13: note: in expansion of macro 'CORE_LOGF_X' - 1141 | CORE_LOGF_X(21, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1156:17: note: in expansion of macro 'CORE_LOGF_X' - 1156 | CORE_LOGF_X(20, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1174:13: note: in expansion of macro 'CORE_LOGF_X' - 1174 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1185:17: note: in expansion of macro 'CORE_LOGF_X' - 1185 | CORE_LOGF_X(24, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1222:9: note: in expansion of macro 'CORE_LOG_X' - 1222 | CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Next': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1235:9: note: in expansion of macro 'CORE_LOG_X' - 1235 | CORE_LOG_X(34, eLOG_Warning, "Heap Next: NULL heap"); - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c:1323:9: note: in expansion of macro 'CORE_LOGF_X' - 1323 | CORE_LOGF_X(33, eLOG_Error, - | ^~~~~~~~~~~ -EFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD//c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o -/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libcomposition_adjustment.so -/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.composition_adjustment.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.c:32: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -cd cgi/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c:38: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X' - 171 | CORE_LOGF_X(33, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi TMPL=cgi -w -j8 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/.#lock-map. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:38: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:583:17: note: in expansion of macro 'CORE_LOGF_X' - 583 | CORE_LOGF_X(2, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:599:17: note: in expansion of macro 'CORE_LOGF_X' - 599 | CORE_LOGF_X(17, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:646:17: note: in expansion of macro 'CORE_LOGF_X' - 646 | CORE_LOGF_X(3, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:658:17: note: in expansion of macro 'CORE_LOGF_X' - 658 | CORE_LOGF_X(18, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:668:13: note: in expansion of macro 'CORE_LOGF_X' - 668 | CORE_LOGF_X(4, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:690:9: note: in expansion of macro 'CORE_LOGF_X' - 690 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:807:13: note: in expansion of macro 'CORE_LOGF_X' - 807 | CORE_LOGF_X(5, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:974:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 974 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1198:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1198 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1327:9: note: in expansion of macro 'CORE_LOGF_X' - 1327 | CORE_LOGF_X(23, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6692:9: note: in expansion of macro 'CORE_LOGF_X' + 6692 | CORE_LOGF_X(56, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1401:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1401 | CORE_LOGF_ERRNO_X(24, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1425:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1425 | CORE_LOGF_ERRNO_X(25, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1501:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1501 | CORE_LOGF_ERRNO_X(7, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1539:13: note: in expansion of macro 'CORE_LOGF_X' - 1539 | CORE_LOGF_X(8, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1608:9: note: in expansion of macro 'CORE_DATAF_X' - 1608 | CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1625:17: note: in expansion of macro 'CORE_LOGF_X' - 1625 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1644:17: note: in expansion of macro 'CORE_DATAF_X' - 1644 | CORE_DATAF_X(9, eLOG_Note, hdr, size, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1695:25: note: in expansion of macro 'CORE_LOGF_X' - 1695 | CORE_LOGF_X(10, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1875:21: note: in expansion of macro 'CORE_LOG' - 1875 | CORE_LOG(eLOG_Warning, - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1898:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1898 | CORE_LOGF_ERRNO_X(11, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11446,8 +10643,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1953:13: note: in expansion of macro 'CORE_LOGF_X' - 1953 | CORE_LOGF_X(19, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6720:13: note: in expansion of macro 'CORE_LOGF_X' + 6720 | CORE_LOGF_X(57, eLOG_Warning, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11461,8 +10658,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1958:13: note: in expansion of macro 'CORE_LOGF_X' - 1958 | CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6734:13: note: in expansion of macro 'CORE_LOGF_X' + 6734 | CORE_LOGF_X(58, eLOG_Warning, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11476,40 +10673,152 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1969:17: note: in expansion of macro 'CORE_LOGF_X' - 1969 | CORE_LOGF_X(13, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6748:17: note: in expansion of macro 'CORE_LOGF_X' + 6748 | CORE_LOGF_X(59, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1977:17: note: in expansion of macro 'CORE_DATAF_X' - 1977 | CORE_DATAF_X(14, eLOG_Note, s, n, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1986:13: note: in expansion of macro 'CORE_LOGF_X' - 1986 | CORE_LOGF_X(15, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11522,8 +10831,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2169:17: note: in expansion of macro 'CORE_LOGF_X' - 2169 | CORE_LOGF_X(16, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6757:17: note: in expansion of macro 'CORE_LOGF_X' + 6757 | CORE_LOGF_X(60, eLOG_Warning, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11537,18 +10846,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2217:13: note: in expansion of macro 'CORE_LOGF_X' - 2217 | CORE_LOGF_X(21, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6767:13: note: in expansion of macro 'CORE_LOGF_X' + 6767 | CORE_LOGF_X(61, eLOG_Warning, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11561,12 +10861,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2474:9: note: in expansion of macro 'CORE_LOGF_X' - 2474 | CORE_LOGF_X(24, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6777:9: note: in expansion of macro 'CORE_LOGF_X' + 6777 | CORE_LOGF_X(62, eLOG_Error, | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11579,71 +10877,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:102:9: note: in expansion of macro 'CORE_LOGF_X' - 102 | CORE_LOGF_X(5, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6907:9: note: in expansion of macro 'CORE_LOGF_X' + 6907 | CORE_LOGF_X(63, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:179:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] - 179 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 - | ~^ ~~ - | | | - | int * unsigned int * - | %n -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:180:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] - 180 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 - | ~^ ~~ - | | | - | int * unsigned int * - | %n -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:941:13: note: in expansion of macro 'CORE_LOGF_X' - 941 | CORE_LOGF_X(4, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:967:13: note: in expansion of macro 'CORE_LOGF_X' - 967 | CORE_LOGF_X(9, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:1160:13: note: in expansion of macro 'CORE_LOGF_X' - 1160 | CORE_LOGF_X(6, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11656,12 +10893,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:1172:9: note: in expansion of macro 'CORE_LOGF_X' - 1172 | CORE_LOGF_X(10, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6948:9: note: in expansion of macro 'CORE_LOGF_X' + 6948 | CORE_LOGF_X(64, eLOG_Error, | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -11753,13 +10991,15 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -11775,13 +11015,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -11797,8 +11039,40 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:6990:13: note: in expansion of macro 'CORE_LOGF_X' + 6990 | CORE_LOGF_X(65, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7000:9: note: in expansion of macro 'CORE_LOGF_X' + 7000 | CORE_LOGF_X(66, eLOG_Error, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -11889,12 +11163,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -11910,10 +11186,17 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -12005,15 +11288,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12030,12 +11311,26 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7031:9: note: in expansion of macro 'CORE_LOGF_X' + 7031 | CORE_LOGF_X(125, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12046,7 +11341,8 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': +IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) @@ -12123,16 +11419,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12148,15 +11440,29 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7107:9: note: in expansion of macro 'CORE_LOGF_X' + 7107 | CORE_LOGF_X(67, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbires.cpp:38: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12172,19 +11478,56 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7159:17: note: in expansion of macro 'CORE_LOGF_X' + 7159 | CORE_LOGF_X(68, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7186:13: note: in expansion of macro 'CORE_LOGF_X' + 7186 | CORE_LOGF_X(69, eLOG_Error, + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' +/build/reproducible-path/ncbi-blastIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' @@ -12196,14 +11539,421 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ + + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:583:17: note: in expansion of macro 'CORE_LOGF_X' + 583 | CORE_LOGF_X(2, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:599:17: note: in expansion of macro 'CORE_LOGF_X' + 599 | CORE_LOGF_X(17, eLOG_Trace, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:646:17: note: in expansion of macro 'CORE_LOGF_X' + 646 | CORE_LOGF_X(3, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:658:17: note: in expansion of macro 'CORE_LOGF_X' + 658 | CORE_LOGF_X(18, eLOG_Trace, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:668:13: note: in expansion of macro 'CORE_LOGF_X' + 668 | CORE_LOGF_X(4, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro 'CORE_LOGF_X' + 7196 | CORE_LOGF_X(70, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7215:9: note: in expansion of macro 'CORE_LOGF_X' + 7215 | CORE_LOGF_X(71, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:690:9: note: in expansion of macro 'CORE_LOGF_X' + 690 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:807:13: note: in expansion of macro 'CORE_LOGF_X' + 807 | CORE_LOGF_X(5, eLOG_Critical, + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro 'CORE_LOGF_X' + 145 | CORE_LOGF_X(7, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro 'CORE_LOGF_X' + 150 | CORE_LOGF_X(9, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro 'CORE_LOGF_X' + 164 | CORE_LOGF_X(11, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro 'CORE_LOGF_X' + 168 | CORE_LOGF_X(8, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro 'CORE_LOGF_X' + 185 | CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:974:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 974 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1198:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1198 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7222:9: note: in expansion of macro 'CORE_LOGF_X' + 7222 | CORE_LOGF_X(72, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro 'CORE_LOGF_X' + 293 | CORE_LOGF_X(10, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:376:17: note: in expansion of macro 'CORE_LOGF_X' + 376 | CORE_LOGF_X(4, eLOG_Trace, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1327:9: note: in expansion of macro 'CORE_LOGF_X' + 1327 | CORE_LOGF_X(23, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1401:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1401 | CORE_LOGF_ERRNO_X(24, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:102:9: note: in expansion of macro 'CORE_LOGF_X' + 102 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:179:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] + 179 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:180:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] + 180 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:609:9: note: in expansion of macro 'CORE_LOGF_X' + 609 | CORE_LOGF_X(3, eLOG_Trace, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1425:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1425 | CORE_LOGF_ERRNO_X(25, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1501:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1501 | CORE_LOGF_ERRNO_X(7, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of m/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -12218,6 +11968,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -12251,12 +12008,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12269,37 +12026,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12312,18 +12044,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgir.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12336,22 +12059,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12364,12 +12080,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12382,12 +12098,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12400,12 +12113,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12418,12 +12137,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12436,19 +12156,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12464,15 +12184,63 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: +acro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7369:9: note: in expansion of macro 'CORE_LOGF_X' + 7369 | CORE_LOGF_X(73, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7431:9: note: in expansion of macro 'CORE_LOGF_X' + 7431 | CORE_LOGF_X(158, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7438:9: note: in expansion of macro 'CORE_LOGF_X' + 7438 | CORE_LOGF_X(159, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgictx.cpp:40: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -12488,9 +12256,43 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ + ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1539:13: note: in expansion of macro 'CORE_LOGF_X' + 1539 | CORE_LOGF_X(8, level, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1608:9: note: in expansion of macro 'CORE_DATAF_X' + 1608 | CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1625:17: note: in expansion of macro 'CORE_LOGF_X' + 1625 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12503,8 +12305,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro 'CORE_LOGF_X' - 145 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:941:13: note: in expansion of macro 'CORE_LOGF_X' + 941 | CORE_LOGF_X(4, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12512,15 +12314,71 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1644:17: note: in expansion of macro 'CORE_DATAF_X' + 1644 | CORE_DATAF_X(9, eLOG_Note, hdr, size, + | ^~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro 'CORE_LOGF_X' - 150 | CORE_LOGF_X(9, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:969:9: note: in expansion of macro 'CORE_LOGF_X' + 969 | CORE_LOGF_X(2, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7451 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12533,9 +12391,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro 'CORE_LOGF_X' - 164 | CORE_LOGF_X(11, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7473:9: note: in expansion of macro 'CORE_LOGF_X' + 7473 | CORE_LOGF_X(156, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12548,9 +12406,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro 'CORE_LOGF_X' - 168 | CORE_LOGF_X(8, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1695:25: note: in expansion of macro 'CORE_LOGF_X' + 1695 | CORE_LOGF_X(10, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12563,10 +12421,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro 'CORE_LOGF_X' - 185 | CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:967:13: note: in expansion of macro 'CORE_LOGF_X' + 967 | CORE_LOGF_X(9, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12579,10 +12437,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro 'CORE_LOGF_X' - 293 | CORE_LOGF_X(10, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:1160:13: note: in expansion of macro 'CORE_LOGF_X' + 1160 | CORE_LOGF_X(6, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12595,10 +12452,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:376:17: note: in expansion of macro 'CORE_LOGF_X' - 376 | CORE_LOGF_X(4, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_connector.c:1172:9: note: in expansion of macro 'CORE_LOGF_X' + 1172 | CORE_LOGF_X(10, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12611,10 +12468,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:609:9: note: in expansion of macro 'CORE_LOGF_X' - 609 | CORE_LOGF_X(3, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:1131:21: note: in expansion of macro 'CORE_LOGF_X' + 1131 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1875:21: note: in expansion of macro 'CORE_LOG' + 1875 | CORE_LOG(eLOG_Warning, + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12627,10 +12498,56 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:969:9: note: in expansion of macro 'CORE_LOGF_X' - 969 | CORE_LOGF_X(2, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7480:9: note: in expansion of macro 'CORE_LOGF_X' + 7480 | CORE_LOGF_X(157, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7493:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7493 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7544:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7544 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1898:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1898 | CORE_LOGF_ERRNO_X(11, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12643,9 +12560,54 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:1131:21: note: in expansion of macro 'CORE_LOGF_X' - 1131 | CORE_LOGF_X(5, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1953:13: note: in expansion of macro 'CORE_LOGF_X' + 1953 | CORE_LOGF_X(19, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1958:13: note: in expansion of macro 'CORE_LOGF_X' + 1958 | CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1969:17: note: in expansion of macro 'CORE_LOGF_X' + 1969 | CORE_LOGF_X(13, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1977:17: note: in expansion of macro 'CORE_DATAF_X' + 1977 | CORE_DATAF_X(14, eLOG_Note, s, n, + | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12662,6 +12624,98 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:1661:13: note: in expansion of macro 'CORE_LOGF_X' 1661 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:1986:13: note: in expansion of macro 'CORE_LOGF_X' + 1986 | CORE_LOGF_X(15, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7664:9: note: in expansion of macro 'CORE_LOGF_X' + 7664 | CORE_LOGF_X(79, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7671:9: note: in expansion of macro 'CORE_LOGF_X' + 7671 | CORE_LOGF_X(78, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7689 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7705:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7705 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2169:17: note: in expansion of macro 'CORE_LOGF_X' + 2169 | CORE_LOGF_X(16, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12675,9 +12729,55 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2217:13: note: in expansion of macro 'CORE_LOGF_X' + 2217 | CORE_LOGF_X(21, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:1932:9: note: in expansion of macro 'CORE_LOGF_X' 1932 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7734:9: note: in expansion of macro 'CORE_LOGF_X' + 7734 | CORE_LOGF_X(82, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7741:9: note: in expansion of macro 'CORE_LOGF_X' + 7741 | CORE_LOGF_X(81, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12694,6 +12794,67 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:2007:17: note: in expansion of macro 'CORE_LOGF_X' 2007 | CORE_LOGF_X(6, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7760:9: note: in expansion of macro 'CORE_LOGF_X' + 7760 | CORE_LOGF_X(83, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro 'CORE_LOGF_X' + 7773 | CORE_LOGF_X(84, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:2474:9: note: in expansion of macro 'CORE_LOGF_X' + 2474 | CORE_LOGF_X(24, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7802:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7802 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12710,19 +12871,206 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_ftp_connector.c:2321:9: note: in expansion of macro 'CORE_LOG' 2321 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_Authenticate': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:223:18: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 223 | s[userlen++] = ':'; - | ~~~~~~~~~~~~~^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:177:10: note: at offset -1 to object 'buf' with size 336 declared here - 177 | char buf[80+sizeof(uuu->net_info->user)*4], *s; - | ^~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:223:18: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 223 | s[userlen++] = ':'; - | ~~~~~~~~~~~~~^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:177:10: note: at offset -1 to object 'buf' with size 336 declared here - 177 | char buf[80+sizeof(uuu->net_info->user)*4], *s; - | ^~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7830:9: note: in expansion of macro 'CORE_LOGF_X' + 7830 | CORE_LOGF_X(96, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7837:9: note: in expansion of macro 'CORE_LOGF_X' + 7837 | CORE_LOGF_X(95, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7890:9: note: in expansion of macro 'CORE_LOGF_X' + 7890 | CORE_LOGF_X(93, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_X' + 7897 | CORE_LOGF_X(92, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7934:9: note: in expansion of macro 'CORE_LOGF_X' + 7934 | CORE_LOGF_X(87, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7941:9: note: in expansion of macro 'CORE_LOGF_X' + 7941 | CORE_LOGF_X(86, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7973:9: note: in expansion of macro 'CORE_LOGF_X' + 7973 | CORE_LOGF_X(98, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:7980:9: note: in expansion of macro 'CORE_LOGF_X' + 7980 | CORE_LOGF_X(97, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8000:9: note: in expansion of macro 'CORE_LOGF_X' + 8000 | CORE_LOGF_X(99, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8018:9: note: in expansion of macro 'CORE_LOGF_X' + 8018 | CORE_LOGF_X(101, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8025:9: note: in expansion of macro 'CORE_LOGF_X' + 8025 | CORE_LOGF_X(100, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8045:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8045 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8207:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8207 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_local.c:36: @@ -12732,6 +13080,22 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket.c:8596:13: note: in expansion of macro 'CORE_LOGF' + 8596 | CORE_LOGF(eLOG_Critical, ("%s reset SSL while it is in use",verb)); + | ^~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.h:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c:36: @@ -12741,10 +13105,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd html/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': @@ -12763,13 +13123,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c:205:9: note: in expansion of macro 'CORE_LOGF_X' 205 | CORE_LOGF_X(5, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html TMPL=html -w -j8 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbosp.h:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c:37: @@ -13195,15 +13548,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c:1205:5: note: in expansion of macro 'CORE_LOGF_X' 1205 | CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with " | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13215,8 +13559,7 @@ | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | make[5]: warning: -j8 forced in submake: resetting jobserver mode. - ^~~~~~~~~~~ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c:1218:13: note: in expansion of macro 'CORE_LOGF_X' 1218 | CORE_LOGF_X(1, eLOG_Warning, | ^~~~~~~~~~~ @@ -13814,7 +14157,23 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c:2550:9: note: in expansion of macro 'CORE_LOG_X' 2550 | CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning, | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +onnect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c: In function 's_SetEndpoint': @@ -14137,14 +14496,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c:496:9: note: in expansion of macro 'CORE_LOG_X' 496 | CORE_LOG_X(eLSub_Alloc, eLOG_Critical, | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/node.cpp -o node.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/html.cpp -o html.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/page.cpp -o page.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/pager.cpp -o pager.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/selection.cpp -o selection.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -14567,14 +14919,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c:826:9: note: in expansion of macro 'CORE_LOG_X' 826 | CORE_LOG_X(eLSub_BadData, eLOG_Warning, "Unable to resolve endpoint."); | ^~~~~~~~~~ -onnect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_Authenticate': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:223:18: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 223 | s[userlen++] = ':'; + | ~~~~~~~~~~~~~^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:177:10: note: at offset -1 to object 'buf' with size 336 declared here + 177 | char buf[80+sizeof(uuu->net_info->user)*4], *s; + | ^~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:223:18: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 223 | s[userlen++] = ':'; + | ~~~~~~~~~~~~~^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_connector.c:177:10: note: at offset -1 to object 'buf' with size 336 declared here + 177 | char buf[80+sizeof(uuu->net_info->user)*4], *s; + | ^~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] @@ -15612,113 +15970,17 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:1615:9: note: in expansion of macro 'CORE_LOG_X' 1615 | CORE_LOG_X(eNSub_BadData, eLOG_Critical, | ^~~~~~~~~~ -In file included from /usr/include/string.h:495, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: -In function 'strncpy', - inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, - inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, - inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:318:28: -/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c: In function 's_ParseResponse.isra': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:694:49: warning: ':' directive writing 1 byte into a region of size between 0 and 19 [-Wformat-overflow=] - 694 | sprintf(now_str, "%d-%02d-%02dT%02d:%02d:%02dZ", - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:694:26: note: directive argument in the range [0, 60] - 694 | sprintf(now_str, "%d-%02d-%02dT%02d:%02d:%02dZ", - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/stdio.h:867, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:69, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:39: -/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 18 and 37 bytes into a destination of size 32 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/string.h:495, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: -In function 'strncpy', - inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, - inlined from 'x_json_value_init_string' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1122:12: -/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here - 1119 | string_len = strlen(string); - | ^~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging/message.cpp -o message.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o -/bin/rm -f libxlogging.so .libxlogging.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxlogging.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC message.o listener.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxlogging.so -/bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xlogging.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' -cd corelib/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o -/bin/rm -f libsequtil.so .libsequtil.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkgmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -cd util/xregexp/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /usr/include/string.h:495, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: -In function 'strncpy', - inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, - inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, - inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:913:27: -/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -In file included from /usr/include/string.h:495, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: -In function 'strncpy', - inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, - inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, - inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1213:32: -/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. +/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o +/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libcomposition_adjustment.so +/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.composition_adjustment.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_core_cxx.cpp:40: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -15832,49 +16094,81 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -cd serial/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial TMPL=serial -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objectio.cpp -o objectio.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp: In member function 'void ncbi::CCgiRequest::GetCGIEntries(ncbi::CEntryCollector_Base&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:1676:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1676 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp: In member function 'ncbi::CStringUTF8 ncbi::CCgiEntry::GetValueAsUTF8(ncbi::CCgiEntry::EOnCharsetError) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:1933:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 1933 | catch (CException) { - | ^~~~~~~~~~ -/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libsequtil.so -/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.sequtil.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +In file included from /usr/include/string.h:495, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: +In function 'strncpy', + inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, + inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, + inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:318:28: +/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ . -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c -o parson.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/nc/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp: In member function 'bool ncbi::CCgiApplication::x_ProcessVersionRequest()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:1904:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1904 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/nc/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c: In function 's_ParseResponse.isra': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:694:49: warning: ':' directive writing 1 byte into a region of size between 0 and 19 [-Wformat-overflow=] + 694 | sprintf(now_str, "%d-%02d-%02dT%02d:%02d:%02dZ", + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:694:26: note: directive argument in the range [0, 60] + 694 | sprintf(now_str, "%d-%02d-%02dT%02d:%02d:%02dZ", + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/stdio.h:867, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/ncbi_util.h:69, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_once.h:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namerd.c:39: +/usr/include/i386-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 18 and 37 bytes into a destination of size 32 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/string.h:495, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: +In function 'strncpy', + inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, + inlined from 'x_json_value_init_string' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1122:12: +/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here + 1119 | string_len = strlen(string); + | ^~~~~~~~~~~~~~ +In file included from /usr/include/string.h:495, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: +In function 'strncpy', + inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, + inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, + inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:913:27: +/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/string.h:495, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:32: +In function 'strncpy', + inlined from 'parson_strndup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:135:5, + inlined from 'parson_strdup' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12, + inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:1213:32: +/usr/include/i386-linux-gnu/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' bi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o @@ -15882,7 +16176,24 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp: In member function 'unsigned int ncbi::CTarEntryInfo::GetMajor() const': +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-pathmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o +/bin/rm -f libsequtil.so .libsequtil.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkgmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging/message.cpp -o message.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o +/bin/rm -f libxlogging.so .libxlogging.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxlogging.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC message.o listener.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxlogging.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxlogging.so +/bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xlogging.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp: In member function 'unsigned int ncbi::CTarEntryInfo::GetMajor() const': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp:480:19: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 480 | return (*((unsigned int*) &m_Stat.orig.st_rdev) >> 16) & 0xFFFF; | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -15890,149 +16201,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp:495:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 495 | return *((unsigned int*) &m_Stat.orig.st_rdev) & 0xFFFF; | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp_cached.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' +/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libsequtil.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libsequtil.so +/bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.sequtil.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp: In member function 'unsigned int ncbi::CArchiveEntryInfo::GetMajor() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp:91:19: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] + 91 | return (*((unsigned int*) &m_Stat.st_rdev) >> 16) & 0xFFFF; + | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp: In member function 'unsigned int ncbi::CArchiveEntryInfo::GetMinor() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp:107:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] + 107 | return *((unsigned int*) &m_Stat.st_rdev) & 0xFFFF; + | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp: In member function 'ncbi::CTar::EStatus ncbi::CTar::x_ReadEntryInfo(bool, bool)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp:2398:15: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 2398 | *((unsigned int*) &m_Current.m_Stat.orig.st_rdev) = @@ -16052,149 +16235,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/miniz/miniz.c:2327:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2327 | if (!dist) break; q = (const mz_uint16*)(d->m_dict + probe_pos); if (TDEFL_READ_UNALIGNED_WORD(q) != s01) continue; p = s; probe_len = 32; | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o -/bin/rm -f libgene_info.so .libgene_info.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libgene_info.so -/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.gene_info.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp: In member function 'unsigned int ncbi::CArchiveEntryInfo::GetMajor() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp:91:19: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] - 91 | return (*((unsigned int*) &m_Stat.st_rdev) >> 16) & 0xFFFF; - | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp: In member function 'unsigned int ncbi::CArchiveEntryInfo::GetMinor() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp:107:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] - 107 | return *((unsigned int*) &m_Stat.st_rdev) & 0xFFFF; - | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos_cxx.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -16314,158 +16354,14 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typeref.cpp -o typeref.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/typemap.cpp -o typemap.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/continfo.cpp -o continfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-pFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp: In member function 'void ncbi::CCgiRequest::GetCGIEntries(ncbi::CEntryCollector_Base&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:1676:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1676 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp: In member function 'ncbi::CStringUTF8 ncbi::CCgiEntry::GetValueAsUTF8(ncbi::CCgiEntry::EOnCharsetError) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/ncbicgi.cpp:1933:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 1933 | catch (CException) { + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_gnutls.c:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 47 | eNcbiCred_MbedTls = 0xC12CC16C @@ -16504,22 +16400,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_gnutls.c:806:5: note: in expansion of macro 'CORE_LOG' 806 | CORE_LOG(eLOG_Warning, "Unavailable feature GNUTLS"); | ^~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:39: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_mbedtls.c:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic] 47 | eNcbiCred_MbedTls = 0xC12CC16C @@ -16688,6 +16568,158 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_mbedtls.c:687:9: note: in expansion of macro 'CORE_LOGF' 687 | CORE_LOGF(level, ("%s V%s (LogLevel=%d)", | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp: In member function 'bool ncbi::CCgiApplication::x_ProcessVersionRequest()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/cgiapp.cpp:1904:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1904 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +ath/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/memberid.cpp -o memberid.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/item.cpp -o item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/member.cpp -o member.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/variant.cpp -o variant.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/choice.cpp -o choice.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistr.cpp -o objistr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostr.cpp -o objostr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o +/bin/rm -f libgene_info.so .libgene_info.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libgene_info.so +/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.gene_info.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/components.cpp -o components.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/commentdiag.cpp -o commentdiag.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/html/indentstream.cpp -o indentstream.o @@ -16700,63 +16732,71 @@ /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -ath/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/memberid.cpp -o memberid.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/item.cpp -o item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/member.cpp -o member.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-pathmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o + -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/iterator.cpp -o iterator.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serial.cpp -o serial.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/exception.cpp -o exception.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objhook.cpp -o objhook.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-piblast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o -/bin/rm -f libxconnect.so .libxconnect.so.stamp +/bin/rm -f libxconnect.so .libxconnect.se-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objlist.cpp -o objlist.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objstack.cpp -o objstack.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:39: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +o.stamp /usr/bin/g++ -std=gnu++14 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_dispd.o ncbi_lbos.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib /bin/ln -f libxconnect.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxconnect.so /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -cd algo/blast/core/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +cd algo/blast/core/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +cd connect/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/ncbi-blast+-2.11.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/variant.cpp -o variant.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/choice.cpp -o choice.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistr.cpp -o objistr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostr.cpp -o objostr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gene_info_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect TMPL=xthrserv -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core TMPL=blast -w -j8 --jobserver-auth=7,8 all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect TMPL=xthrserv -w -j15 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core TMPL=blast -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o @@ -16764,7 +16804,13 @@ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile./build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); | ^ @@ -16778,6 +16824,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 758 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] + 567 | lut->scansub_callback = (void *)s_BlastAaScanSubject; + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] + 570 | lut->scansub_callback = (void *)s_BlastSmallAaScanSubject; + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] + 575 | lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_engine.c:1366:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1366 | (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; @@ -16788,34 +16844,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_engine.c:1591:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1591 | ((T_MB_IdxEndSearchIndication)( | ^ - -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile./build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] - 567 | lut->scansub_callback = (void *)s_BlastAaScanSubject; - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] - 570 | lut->scansub_callback = (void *)s_BlastSmallAaScanSubject; - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] - 575 | lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] - 2236 | lookup->hash_callback = FNV_hash; - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] - 2296 | lookup->hash_callback, - | ~~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' - 181 | TNaLookupHashFunction hash_func, - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 291 | lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4; @@ -16845,18 +16873,30 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1338 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1343 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1; | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1345 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2; | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] + 2236 | lookup->hash_callback = FNV_hash; + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1347 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3; | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1349 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] + 2296 | lookup->hash_callback, + | ~~~~~~^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' + 181 | TNaLookupHashFunction hash_func, + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1354 | lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4; | ^ @@ -16942,14 +16982,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 3006 | return (void *)s_MBScanSubject_Any; | ^ --2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o -/bin/rm -f libxcgi.so .libxcgi.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcgi.so -/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcgi.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o @@ -17055,28 +17087,21 @@ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] - 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:33: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here - 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:52:22: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] - 52 | CThreadedServer& m_Server; // NCBI_FAKE_WARNING - | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:33: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here - 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blas/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 306 | else if (strcasecmp("mapper", program) == 0) | ^~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 309 | return 0; | ^~~~~~ -t+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o +ial/objostrxml.cpp -o objostrxml.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serializable.cpp -o serializable.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serialobject.cpp -o serialobject.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/pathhook.cpp -o pathhook.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOt+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_util.c -o blast_util.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o @@ -17096,7 +17121,8 @@ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/sharmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +e/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/pattern.c -o pattern.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o @@ -17108,20 +17134,35 @@ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/split_query.c -o split_query.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/rep/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] + 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:33: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here + 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:52:22: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] + 52 | CThreadedServer& m_Server; // NCBI_FAKE_WARNING + | ^~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/threaded_server.cpp:33: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here + 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer + | ^~~~~~~~~~~~~~~ +roducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/split_query.c -o split_query.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o -/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/alg -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/iterator.cpp -o iterator.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serial.cpp -o serial.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/delaybuf.cpp -o delaybuf.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/pack_string.cpp -o pack_string.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/exception.cpp -o exception.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objhook.cpp -o objhook.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pio/blast/core/jumper.c -o jumper.o +/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/alg-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o +/bin/rm -f libxcgi.so .libxcgi.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcgi.so +/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcgi.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' +o/blast/core/jumper.c -o jumper.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilter_mapper.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/core/spliced_hits.c -o spliced_hits.o /bin/rm -f libblast.so .libblast.so.stamp @@ -17143,17 +17184,17 @@ /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -cd connect/services/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null +cd connect/services/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services TMPL=xconnserv -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services TMPL=xconnserv -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp -o grid_worker.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/ns_client_factory.cpp -o ns_client_factory.o @@ -17161,7 +17202,13 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_client.cpp -o grid_client.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_client_app.cpp -o grid_client_app.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o grid_rw_impl.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproduciblIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_client_app.hpp:39, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_client_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -17281,7 +17328,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -17375,7 +17422,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17383,7 +17430,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17401,7 +17448,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17409,7 +17456,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17427,7 +17474,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17435,7 +17482,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17455,7 +17502,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -17549,7 +17596,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17557,7 +17604,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17575,7 +17622,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17583,7 +17630,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17601,7 +17648,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -17609,7 +17656,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_app.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17628,8 +17675,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -17722,16 +17768,14 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17748,16 +17792,14 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17774,16 +17816,14 @@ 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17802,7 +17842,8 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -17895,14 +17936,16 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17919,14 +17962,16 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -17943,14 +17988,16 @@ 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_commit_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18133,29 +18180,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/lzo.cpp -o lzo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o -/bin/rm -f libxcompress.so .libxcompress.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -le-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objlist.cpp -o objlist.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objstack.cpp -o objstack.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serdl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcompress.so -/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcompress.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -18248,14 +18277,16 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18272,14 +18303,16 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18296,14 +18329,16 @@ 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18322,8 +18357,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -18416,16 +18450,14 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18442,16 +18474,14 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18468,16 +18498,14 @@ 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18493,31 +18521,48 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o grid_rw_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproduciblial/objostrxml.cpp -o objostrxml.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serializable.cpp -o serializable.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/serialobject.cpp -o serialobject.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/pathhook.cpp -o pathhook.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOe-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netservice_api.cpp -o netservice_api.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gene_info_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/rpcbase.cpp -o rpcbase.o +/bin/rm -f libxser.so .libxser.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxser.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxser.so +/bin/ln -f .xser.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xser.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' +cd serial/datatool/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool TMPL=datatool -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.cpp -o datatool.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp -o type.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/namespace.cpp -o namespace.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/statictype.cpp -o statictype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/enumtype.cpp -o enumtype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/reftype.cpp -o reftype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/unitype.cpp -o unitype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/blocktype.cpp -o blocktype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/choicetype.cpp -o choicetype.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/typestr.cpp -o typestr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -18608,18 +18653,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18635,87 +18676,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/rpcbase.cpp -o rpcbase.o -/bin/rm -f libxser.so .libxser.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxser.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxser.so -/bin/ln -f .xser.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xser.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -cd serial/datatool/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool TMPL=datatool -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.cpp -o datatool.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp -o type.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/namespace.cpp -o namespace.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/statictype.cpp -o statictype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/enumtype.cpp -o enumtype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/reftype.cpp -o reftype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -18807,13 +18770,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/type.cpp:49: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -18945,27 +18908,31 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -ap=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_key.cpp -o netschedule_key.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_expt.cpp -o netschedule_api_expt.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_key.cpp -o netcache_key.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_rw.cpp -o netcache_rw.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_params.cpp -o netcache_params.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_api.cpp -o netcache_api.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_api_admin.cpp -o netcache_api_admin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_search.cpp -o netcache_search.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netservice_protocol_parser.cpp -o netservice_protocol_parser.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/ut/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/unitype.cpp -o unitype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/blocktype.cpp -o blocktype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/choicetype.cpp -o choicetype.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/typestr.cpp -o typestr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: +security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/lzo.cpp -o lzo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o +/bin/rm -f libxcompress.so .libxcompress.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -le-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netservice_api.cpp -o netservice_api.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mdl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcompress.so +/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcompress.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -19056,14 +19023,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/classstr.cpp:33: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -19079,6 +19050,58 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:89:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 89 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:75: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/wn_cleanup.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/grid_worker_impl.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/connect/services/grid_worker_app.hpp:93:51: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 93 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/choicestr.cpp:35: @@ -19317,14 +19340,13 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/choicestr.cpp -o choicestr.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/value.cpp -o value.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/cil.cpp -o util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/clparser.cpp -o clparser.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/json_over_uttp.cpp -o json_over_uttp.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorage.cpp -o netstorage.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorage_rpc.cpp -o netstorage_rpc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorageobjectloc.cpp -o netstorageobjectloc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorageobjectinfo.cpp -o netstorageobjectinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/cap=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_key.cpp -o netschedule_key.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_expt.cpp -o netschedule_api_expt.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netcache_key.cpp -o netcache_key.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/moduleset.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) @@ -19444,20 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compound_id_v0.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o -/bin/rm -f libxconnserv.so .libxconnserv.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.oIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCil.cpp -o util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/clparser.cpp -o clparser.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/json_over_uttp.cpp -o json_over_uttp.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorage.cpp -o netstorage.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorage_rpc.cpp -o netstorage_rpc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorageobjectloc.cpp -o netstorageobjectloc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorageobjectinfo.cpp -o netstorageobjectinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/aliasstr.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -19579,13 +19607,7 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-b netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxconnserv.so -/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xconnserv.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-bIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/datatool.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/xsdparser.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -19824,7 +19846,20 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o +/usr/bin/g++ -std=gnu++14 -c -Wall EFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netstorage_direct_nc.cpp -o netstorage_direct_nc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/ns_output_parser.cpp -o ns_output_parser.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/ns_job_serializer.cpp -o ns_job_serializer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/compound_id.cpp -o compound_id.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o +/bin/rm -f libxconnserv.so .libxconnserv.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxconnserv.so +/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xconnserv.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' +-Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o @@ -19834,55 +19869,91 @@ /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -cd objects/general/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/biblio/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/medline/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/pub/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/seqcode/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +cd objects/general/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/biblio/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/medline/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/pub/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/seqcode/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/seq/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +cd objects/seqset/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objects/seq/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/scoremat/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objects/seqset/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objects/scoremat/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/genomecoll/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/seqedit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh general all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh biblio all +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/seqsplit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/submit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/variation/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh medline all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh general all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh pub all cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqcode all cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh scoremat all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh biblio all cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqset all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blast all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastdb all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh submit all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqedit all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh variation all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh genome_collection all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqsplit all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh pub all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -w -j8 --jobserver-auth=9,10 all -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -w -j15 --jobserver-auth=9,10 all +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqcode.asn -M "" -oA \ @@ -19891,9 +19962,20 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ + -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ @@ -19902,13 +19984,33 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pub -or objects/pub -odi -od pub.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ + -oc submit -or objects/submit -odi -od submit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ @@ -19917,7 +20019,18 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ + -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m general.asn -M "" -oA \ @@ -19926,66 +20039,102 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pub -or objects/pub -odi -od pub.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ - -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ + -oc variation -or objects/variation -odi -od variation.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ + -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' /usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ + -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ @@ -19994,33 +20143,88 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' /usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -status=0 ; \ -MAKE="/usr/bin/make -w -j8 --jobserver-auth=12,14"; \ -export MAKE; \ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ + -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +Waiting for /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ + -oc blast -or objects/blast -odi -od blast.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' +/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +status=0 ; \ +MAKE="/usr/bin/make -w -j15 --jobserver-auth=12,14"; \ +export MAKE; \ for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \ d=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../$x ; \ (cd $d && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh) || status=9 ; \ @@ -20030,7 +20234,7 @@ echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \ done ; \ exit $status -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -20039,7 +20243,7 @@ datatool: 2.20.1 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign' -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqblock' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -20047,10 +20251,10 @@ -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump \ datatool: 2.20.1 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.make[7]: warning: -j8 forced in submake: resetting jobserver mode. -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -11.0+ds/c++/src/objects/seqblock' -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+make[7]: warning: -j15 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +-2.11.0+ds/c++/src/objects/seqblock' +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA \ @@ -20059,7 +20263,7 @@ datatool: 2.20.1 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat' -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA \ @@ -20068,18 +20272,20 @@ datatool: 2.20.1 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc' -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blasmake[7]: warning: -j8 forced in submake: resetting jobserver mode. -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbmake[7]: warning: -j15 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m general.asn -M "" -oA \ - -oc general -or objects/general -odi -od general.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ + -oc medline -or objects/medline -odi -od medline.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +cd objects/id1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ @@ -20088,54 +20294,38 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ - -oc medline -or objects/medline -odi -od medline.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ + -oc blast -or objects/blast -odi -od blast.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -cd objects/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/genomecoll/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' +cd objects/id2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqcode.asn -M "" -oA \ - -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ + -oc variation -or objects/variation -odi -od variation.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ - -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pub -or objects/pub -odi -od pub.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -cd objects/seqedit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objects/seqsplit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ @@ -20145,49 +20335,21 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pub -or objects/pub -odi -od pub.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ + -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub' -cd objects/submit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' +cd objects/taxon1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -cd objects/variation/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blast all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh genome_collection all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqedit all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seqsplit all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh submit all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh variation all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastdb all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ - -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ @@ -20196,18 +20358,20 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m general.asn -M "" -oA \ + -oc general -or objects/general -odi -od general.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' +cd objects/blastxml/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +cd objects/blastxml2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ @@ -20216,141 +20380,22 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ - -oc variation -or objects/variation -odi -od variation.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ - -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh gencoll_client all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -Waiting for /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ - -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ - -oc blast -or objects/blast -odi -od blast.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. -t+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ - -datatool: 2.20.1 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres' -/usr/bin/make -w -j8 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ - -datatool: 2.20.1 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seq all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +cd objects/entrez2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ - -oc seq -or objects/seq -odi -od seq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ + -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' +cd objects/gbseq/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ @@ -20359,65 +20404,7 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ - -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ - -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ - -oc blast -or objects/blast -odi -od blast.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -cd objects/id1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/id2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/taxon1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ - -oc submit -or objects/submit -odi -od submit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ - -oc variation -or objects/variation -odi -od variation.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ @@ -20426,31 +20413,68 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/medlars/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -cd objects/blastxml/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/blastxml2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/entrez2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources +cd objects/pubmed/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/mla/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqcode.asn -M "" -oA \ + -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd objects/taxon3/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +cd objects/valid/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh id1 all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh taxon1 all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastxml all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastxml2 all cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh entrez2 all cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh id2 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastxml2 all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh gbseq all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh blastxml all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh medlars all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh pubmed all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh taxon1 all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh taxon3 all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh mla all +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh valid all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. File blastxml.module not found. Using defaults... -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml.asn -M "" -oA \ @@ -20459,8 +20483,19 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m valid.asn -M "" -oA \ + -oc valid -or objects/valid -odi -od valid.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' File blastxml2.module not found. Using defaults... -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml2.asn -M "" -oA \ @@ -20469,11 +20504,47 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ + -oc medlars -or objects/medlars -odi -od medlars.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gbseq.asn -M "" -oA \ + -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ @@ -20482,13 +20553,14 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' -.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' - -Acquired /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 27012 (make_asn) -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA \ @@ -20497,32 +20569,78 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ + -oc mla -or objects/mla -odi -od mla.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' +/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +.make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m entrez2.asn -M "" -oA \ @@ -20531,14 +20649,27 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' +/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' + +Acquired /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 127411 (make_asn) +/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ @@ -20547,60 +20678,74 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' +/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/SQLITE3.enabled', needed by 'requirements'. Stop. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' NOTE: skipping project "local_taxon" due to unmet requirements -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' /usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' /usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA \ @@ -20610,89 +20755,68 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/SQLITE3.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' NOTE: skipping project "gencoll_client" due to unmet requirements make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ - -oc seq -or objects/seq -odi -od seq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -cd objects/gbseq/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh gbseq all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gbseq.asn -M "" -oA \ - -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' +i-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' -File blastxml.module not found. Using defaults... -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres' +/usr/bin/make -w -j15 --jobserver-auth=12,14 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml.asn -M "" -oA \ - -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh seq all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m entrez2.asn -M "" -oA \ - -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ + -oc seq -or objects/seq -odi -od seq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA \ @@ -20701,37 +20825,10 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1' -File blastxml2.module not found. Using defaults... -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml2.asn -M "" -oA \ - -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -cd objects/medlars/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/pubmed/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/mla/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/taxon3/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -cd objects/valid/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +cd objects/general/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqcode/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ @@ -20741,151 +20838,34 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -cd objects/general/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh mla all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh medlars all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh valid all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh taxon3 all -cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/new_module.sh pubmed all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general TMPL=general -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA \ - -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m entrez2.asn -M "" -oA \ + -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -cd objects/seqcode/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ - -oc medlars -or objects/medlars -odi -od medlars.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m valid.asn -M "" -oA \ - -oc valid -or objects/valid -odi -od valid.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ - -oc mla -or objects/mla -odi -od mla.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump \ - -datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/entrez2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null +File blastxml.module not found. Using defaults... +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml.asn -M "" -oA \ + -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +cd objects/blastxml/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gbseq.asn -M "" -oA \ @@ -20895,18 +20875,10 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -cd objects/blastxml/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objects/gbseq/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ @@ -20915,7 +20887,21 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +File blastxml2.module not found. Using defaults... +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m blastxml2.asn -M "" -oA \ + -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ @@ -20924,7 +20910,21 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +cd objects/blastxml2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ @@ -20933,11 +20933,7 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -cd objects/blastxml2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m valid.asn -M "" -oA \ @@ -20946,49 +20942,88 @@ datatool: 2.20.1 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -cd objects/entrez2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null -cd objects/gbseq/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -w -j8 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump \ datatool: 2.20.1 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode TMPL=seqcode -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general TMPL=general -w -j15 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml TMPL=blastxml -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq TMPL=gbseq -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA \ + -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +/usr/bin/make -w -j15 --jobserver-auth=7,8 -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ + -oc seq -or objects/seq -odi -od seq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ + +datatool: 2.20.1 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o @@ -21019,39 +21054,6 @@ /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general__.cpp -o general__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general___.cpp -o general___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/uoconv.cpp -o uoconv.o -/bin/rm -f libgeneral.so .libgeneral.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxser -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libgeneral.so -/bin/ln -f .general.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.general.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -cd objects/biblio/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null -cd objects/valid/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid TMPL=valid -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio TMPL=biblio -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o @@ -21062,16 +21064,17 @@ /bin/ln -f .entrez2.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.entrez2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -cd objects/entrez2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/entrez2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j8 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o @@ -21081,7 +21084,6 @@ /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libgbseq.so /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o @@ -21093,6 +21095,39 @@ /bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.entrez2cli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general__.cpp -o general__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/general___.cpp -o general___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/general/uoconv.cpp -o uoconv.o +/bin/rm -f libgeneral.so .libgeneral.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxser -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libgeneral.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libgeneral.so +/bin/ln -f .general.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.general.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' +cd objects/biblio/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null +cd objects/valid/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/biblio TMPL=biblio -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid TMPL=valid -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/valid/valid___.cpp -o valid___.o @@ -21114,28 +21149,28 @@ /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -cd objects/medline/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null -cd objects/medlars/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medline/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medlars/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline TMPL=medline -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars TMPL=medlars -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medline TMPL=medline -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars TMPL=medlars -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars__.cpp -o medlars__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/medlars/medlars___.cpp -o medlars___.o @@ -21156,28 +21191,28 @@ /bin/ln -f .medline.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -cd objects/pub/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null -cd objects/pubmed/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pub/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pubmed/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub TMPL=pub -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pub TMPL=pub -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed TMPL=pubmed -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o @@ -21198,51 +21233,41 @@ /bin/ln -f .pub.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -cd objects/seq/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null -cd objects/mla/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seq/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null +cd objects/mla/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla TMPL=mla -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq TMPL=seq -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq TMPL=seq -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla TMPL=mla -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq__.cpp -o seq__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqalign__.cpp -o seqalign__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqblock__.cpp -o seqblock__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqfeat__.cpp -o seqfeat__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqloc__.cpp -o seqloc__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-timeIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30, - from seqfeat__.cpp:1: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] - 249 | pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, - from seqfeat__.cpp:1: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here - 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqres__.cpp -o seqres__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqtable__.cpp -o seqtable__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq___.cpp -o seq___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqalign___.cpp -o seqalign___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqblock___.cpp -o seqblock___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqfeat___.cpp -o seqfeat___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1382:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] @@ -21272,6 +21297,28 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1365:6: note: declared here 1365 | void CSeq_align::RemapToLoc(TDim row, | ^~~~~~~~~~ +.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqloc___.cpp -o seqloc___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqres___.cpp -o seqres___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqtable___.cpp -o seqtable___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30, + from seqfeat__.cpp:1: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] + 249 | pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, + from seqfeat__.cpp:1: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here + 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, from seqfeat__.cpp:1: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': @@ -21288,17 +21335,21 @@ /bin/ln -f .mla.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -cd objects/mla/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/mla/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla TMPL=mlacli -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla TMPL=mlacli -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2864:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 2864 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48, from seqfeat__.cpp:1: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static void ncbi::objects::CSubSource::IsCorrectDateFormat(const string&, bool&, bool&)': @@ -21312,7 +21363,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/../seqfeat/SubSource.cpp:514:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 514 | } catch (CException) { | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' +build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.so .libmlacli.so.stamp @@ -21322,36 +21378,7 @@ /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' - -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqres__.cpp -o seqres__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqtable__.cpp -o seqtable__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq___.cpp -o seq___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqalign___.cpp -o seqalign___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqblock___.cpp -o seqblock___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqfeat___.cpp -o seqfeat___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2864:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 2864 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ -.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqloc___.cpp -o seqloc___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqres___.cpp -o seqres___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include seqtable___.cpp -o seqtable___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=//build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1505 | if ( row_n == p_row ) { - | ~~~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstDisc(ncbi::CRef&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1651:16: warning: catching polymorphic type 'class ncbi::objects::CAnnotMapperException' by value [-Wcatch-value=] - 1651 | catch (CAnnotMapperException) { - | ^~~~~~~~~~~~~~~~~~~~~ -build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/sofa_map.cpp:44:29: warning: 'CSofaMap' is deprecated [-Wdeprecated-declarations] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/sofa_map.cpp:44:29: warning: 'CSofaMap' is deprecated [-Wdeprecated-declarations] 44 | CSofaMap::TYPEMAP CSofaMap::mMapSofaTypeToId; | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/sofa_map.cpp:35: @@ -21365,6 +21392,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seq/sofa_map.hpp:43:39: note: declared here 43 | class NCBI_DEPRECATED NCBI_SEQ_EXPORT CSofaMap | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1505 | if ( row_n == p_row ) { + | ~~~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstDisc(ncbi::CRef&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_align_mapper_base.cpp:1651:16: warning: catching polymorphic type 'class ncbi::objects::CAnnotMapperException' by value [-Wcatch-value=] + 1651 | catch (CAnnotMapperException) { + | ^~~~~~~~~~~~~~~~~~~~~ blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/so_map.cpp -o so_map.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o @@ -21375,72 +21410,72 @@ /bin/ln -f .seq.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -cd objects/seqset/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null -cd objects/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objects/genomecoll/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null -cd objects/variation/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null -cd objects/taxon1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqset/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null +cd objects/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null +cd objects/genomecoll/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null +cd objects/variation/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon3/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objects/taxon3/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation TMPL=variation -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset TMPL=seqset -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqset TMPL=seqset -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blastdb TMPL=blastdb -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation TMPL=variation -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/cache.cpp: In member function 'void ncbi::objects::CDomainStorage::AddField(int, int, const string&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/cache.cpp:787:24: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] 787 | if( m_types.size() <= field_no ) { @@ -21466,50 +21501,72 @@ /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -cd objects/scoremat/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqedit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqsplit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/scoremat/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqedit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seqsplit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/submit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/id1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/submit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit TMPL=submit -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat TMPL=scoremat -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit TMPL=seqedit -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit TMPL=submit -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1 TMPL=id1 -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o @@ -21521,25 +21578,6 @@ /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -cd objects/id1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o -/bin/rm -f libtaxon1.so .libtaxon1.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 /usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1 TMPL=id1 -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o @@ -21550,18 +21588,15 @@ /bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -cd objtools/pubseq_gateway/client/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. --O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o +/bin/rm -f libtaxon1.so .libtaxon1.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libtaxon1.so /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.taxon1.dep @@ -21577,6 +21612,16 @@ /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o +/bin/rm -f libpsg_client.so .libpsg_client.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libpsg_client.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC psg_client.o psg_client_transport.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxconnserv +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libpsg_client.so +/bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.psg_client.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/submit/submit___.cpp -o submit___.o @@ -21587,17 +21632,17 @@ /bin/ln -f .submit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -cd objtools/readers/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/readers/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers TMPL=xobjread -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_message.cpp -o reader_message.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_listener.cpp -o reader_listener.o @@ -21605,7 +21650,13 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/read_util.cpp -o read_util.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/seqid_validate.cpp -o seqid_validate.o -/usr/bin/gIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_read.cpp -o agp_read.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/nIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/format_guess_ex.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) @@ -21718,37 +21769,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o -/bin/rm -f libpsg_client.so .libpsg_client.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libpsg_client.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC psg_client.o psg_client_transport.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxconnserv -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libpsg_client.so -/bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.psg_client.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o -/bin/rm -f libscoremat.so .libscoremat.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libscoremat.so -/bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.scoremat.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast TMPL=blast -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o @@ -21759,6 +21779,18 @@ /bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp:1700:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] + 1700 | if (code < CODE_Last) { + | ~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp:1700:14: warning: comparison between types 'ncbi::CAgpErr::EErrCode' and 'ncbi::CAgpErrEx::' [-Wsign-compare] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnGapOrComponent()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:160:20: warning: comparison of integer expressions of different signedness: 'int' and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] + 160 | if(m_max_obj_beg < m_this_row->object_beg) m_max_obj_beg = m_this_row->object_beg; + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:229:23: warning: comparison of integer expressions of different signedness: 'int' and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] + 229 | if(m_max_comp_beg < m_this_row->component_beg) m_max_comp_beg = m_this_row->component_beg; + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector >*)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); @@ -21775,18 +21807,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here 52 | void AgpRead(CNcbiIstream& is, | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp:1700:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] - 1700 | if (code < CODE_Last) { - | ~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp:1700:14: warning: comparison between types 'ncbi::CAgpErr::EErrCode' and 'ncbi::CAgpErrEx::' [-Wsign-compare] -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnGapOrComponent()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:160:20: warning: comparison of integer expressions of different signedness: 'int' and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] - 160 | if(m_max_obj_beg < m_this_row->object_beg) m_max_obj_beg = m_this_row->object_beg; - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:229:23: warning: comparison of integer expressions of different signedness: 'int' and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] - 229 | if(m_max_comp_beg < m_this_row->component_beg) m_max_comp_beg = m_this_row->component_beg; - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:405:25: warning: comparison of integer expressions of different signedness: 'int' and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] 405 | if(it->second != m_this_row->component_end) m_has_partial_comp=true; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -21800,75 +21820,47 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:586:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 586 | catch(CException e){ | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o -/bin/rm -f libseqedit.so .libseqedit.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqedit.so -/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_read.cpp -o agp_read.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/n/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp:508:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 508 | if (blockSizes.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp:529:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 529 | if (blockStarts.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o -/bin/rm -f libseqsplit.so .libseqsplit.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libseqsplit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqsplit.so -/bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqsplit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -cd objmgr/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null -cd objects/id2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr TMPL=objmgr -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2 TMPL=id2 -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPImake[5]: warning: -j8 forced in submake: resetting jobserver mode. o-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SO/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags, ncbi::objects::CFastaReader::FIdCheck)': +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SO/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp:508:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 508 | if (blockSizes.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/bed_reader.cpp:529:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 529 | if (blockStarts.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o +/bin/rm -f libscoremat.so .libscoremat.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libscoremat.so +/bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.scoremat.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast TMPL=blast -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags, ncbi::objects::CFastaReader::FIdCheck)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta.cpp:225:27: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations] 225 | m_fIdCheck(f_idcheck) | ^ @@ -22039,6 +22031,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:433:53: note: declared here 433 | NCBI_STD_DEPRECATED("") SGap::TLinkEvidSet m_gap_linkage_evidence; | ^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const string&, const std::vector&, int, int, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 56 | if ((orderedIds.size() > idCount) && + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(ncbi::objects::CAlnFormatGuesser::TSample&, ncbi::objects::CPeekAheadStream&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] 137 | if (lineCount < sample.size()) { @@ -22061,17 +22057,17 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:295:22: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 295 | return (dataSize == (endOffset - startOffset + 1)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const string&, const std::vector&, int, int, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 56 | if ((orderedIds.size() > idCount) && - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ -URCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, ncbi::CAlnReader::TReadFlags)': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o +/bin/rm -f libseqedit.so .libseqedit.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libseqedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqedit.so +/bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, ncbi::CAlnReader::TReadFlags)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 409 | for (int i=0; i< numDeflines; ++i) { | ~^~~~~~~~~~~~~ @@ -22083,10 +22079,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { | ~~^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp: In member function 'virtual void ncbi::objects::CAlnScannerFastaGap::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp:121:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] - 121 | if (currentDataSize != expectedDataSize) { - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] 92 | for (auto i=0; i < mSequences.size(); ++i) { @@ -22095,7 +22087,56 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] 233 | if (index >= mSeqIds.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'virtual void ncbi::objects::CAlnScannerClustal::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp: In member function 'virtual void ncbi::objects::CAlnScannerFastaGap::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp:121:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] + 121 | if (currentDataSize != expectedDataSize) { + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +cbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproduciblemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o +/bin/rm -f libseqsplit.so .libseqsplit.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libseqsplit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqsplit.so +/bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqsplit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' +cd objmgr/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null +cd objects/id2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2 TMPL=id2 -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr TMPL=objmgr -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPI/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'virtual void ncbi::objects::CAlnScannerClustal::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:111:10: warning: unused variable 'blockLineLength' [-Wunused-variable] 111 | int blockLineLength = 0; | ^~~~~~~~~~~~~~~ @@ -22109,14 +22150,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:299:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 299 | if (currentLineLength != blockLineLength) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 129 | if (dataLineCount < mSequenceCount) { // in first block - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 210 | if (mSequenceCount != mSeqIds.size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ C -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o @@ -22124,113 +22157,17 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/graph_ci.cpp -o graph_ci.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_object.cpp -o annot_object.o -/usr/bin/g++ -std=g/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:73:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 73 | if (lineInBlock != mSeqIds.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:157:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 157 | if (lineInBlock >= mSeqIds.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:187:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 187 | for (auto i = 0; i < seqData.size(); ++i) { - | ~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In static member function 'static bool ncbi::objects::CAlnScannerSequin::xExtractSequinSequenceData(const string&, std::string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:260:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 260 | for (auto curBlock = 3; curBlock < tokens.size() - 1; ++curBlock) { - | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:265:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 265 | for (auto curBlock = 1; curBlock < tokens.size(); ++curBlock) { - | ~~~~~~~~~^~~~~~~~~~~~~~~ -cbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproduciblemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o -/bin/rm -f libid2.so .libid2.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libid2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libid2.so -/bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 125 | if (lineInBlock != expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/names.cpp -o names.o -/bin/rm -f libxnetblast.so .libxnetblast.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxnetblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxnetblast.so -/bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xnetblast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -cd objects/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: +/usr/bin/g++ -std=gIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22246,9 +22183,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22264,9 +22201,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22282,9 +22219,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22300,9 +22237,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22312,20 +22249,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22336,7 +22271,7 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -22427,12 +22362,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -22448,18 +22383,49 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:73:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 73 | if (lineInBlock != mSeqIds.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:157:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 157 | if (lineInBlock >= mSeqIds.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:187:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 187 | for (auto i = 0; i < seqData.size(); ++i) { + | ~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In static member function 'static bool ncbi::objects::CAlnScannerSequin::xExtractSequinSequenceData(const string&, std::string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:260:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 260 | for (auto curBlock = 3; curBlock < tokens.size() - 1; ++curBlock) { + | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:265:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 265 | for (auto curBlock = 1; curBlock < tokens.size(); ++curBlock) { + | ~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 129 | if (dataLineCount < mSequenceCount) { // in first block + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 210 | if (mSequenceCount != mSeqIds.size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 125 | if (lineInBlock != expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22475,9 +22441,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22493,9 +22459,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22511,9 +22477,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22529,9 +22495,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22541,20 +22507,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22564,21 +22528,139 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: +-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp -o track_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/phrap.cpp -o phrap.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp -o reader_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBU/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp:473:18: warning: 'CGFFReader' is deprecated [-Wdeprecated-declarations] + 473 | CRef + | ^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff_reader.hpp:71:44: note: declared here + 71 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGFFReader + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:99:27: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] + 99 | CGff3SofaTypes& SofaTypes(); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here + 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:53:27: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] + 53 | CGff3SofaTypes& SofaTypes() + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here + 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp: In function 'ncbi::objects::CGff3SofaTypes& ncbi::objects::SofaTypes()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:56:24: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] + 56 | static CSafeStatic m_Lookup; + | ^~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here + 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp: In constructor 'ncbi::objects::CGff3SofaTypes::CGff3SofaTypes()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:67:14: warning: 'CSofaMap' is deprecated [-Wdeprecated-declarations] + 67 | CSofaMap SofaMap; + | ^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seq/sofa_map.hpp:43:39: note: declared here + 43 | class NCBI_DEPRECATED NCBI_SEQ_EXPORT CSofaMap + | ^~~~~~~~ +nu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_ci.cpp -o annot_ci.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_info.cpp -o tse_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp: In member function 'ncbi::CRef ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp:554:44: warning: enum constant in boolean context [-Wint-in-bool-context] + 554 | if (fRemoveRedundancy && m_Library && + | ^~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:88: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp: In constructor 'ncbi::objects::CReaderBase::CReaderBase(ncbi::objects::CReaderBase::TReaderFlags, const string&, const string&, ncbi::objects::CReaderBase::SeqIdResolver, ncbi::objects::CReaderListener*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp:374:19: warning: 'ncbi::objects::CReaderBase::mSeqIdResolve' will be initialized after [-Wreorder] + 374 | SeqIdResolver mSeqIdResolve; + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp:371:29: warning: 'std::unique_ptr ncbi::objects::CReaderBase::m_pTrackDefaults' [-Wreorder] + 371 | unique_ptr m_pTrackDefaults; + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:155:1: warning: when initialized here [-Wreorder] + 155 | CReaderBase::CReaderBase( + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:817:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 817 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:906:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 906 | for (auto i=0; i)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:991:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 991 | for (auto i=0; i::size_type' {aka 'unsigned int'} [-Wsign-compare] + 144 | if (mBlockCount != mBlockSizes.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp:150:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 150 | if (mBlockCount != mBlockStartsQ.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 156 | if (mBlockCount != mBlockStartsT.size()) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope.cpp -o scope.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/iIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22594,9 +22676,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22612,9 +22694,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22630,9 +22712,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22648,9 +22730,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22660,26 +22742,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22689,45 +22763,160 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'bool ncbi::objects::{anonymous}::x_FindBrackets(const ncbi::CTempString&, size_t&, size_t&, size_t&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:298:14: warning: unused variable 'found' [-Wunused-variable] + 298 | bool found = false; + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const ncbi::objects::CSourceModParser::SMod*, const ncbi::objects::CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:879:20: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] + 879 | for (int i=0; i&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:915:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 915 | for (auto i=0; i, ncbi::objects::CSeqFeatData&, ncbi::objects::CFeatureTableReader_Imp::EQual, const string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/readfeat.cpp:1410:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1410 | } catch( CStringException ) { + | ^~~~~~~~~~~~~~~~ +/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/mod_to_enum.cpp -o mod_to_enum.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/message_listener.cpp -o message_listener.o +/usr/bin/g++ -std=gnu++14 -c D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/handle_range.cpp -o handle_range.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/object_manager.cpp -o object_manager.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_vector.cpp -o seq_vector.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 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-specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mapmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/names.cpp -o names.o +/bin/rm -f libxnetblast.so .libxnetblast.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxnetblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxnetblast.so +/bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xnetblast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +cd objects/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast TMPL=xnetblastcli -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_app_util -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22743,9 +22932,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22761,9 +22950,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22779,9 +22968,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22797,9 +22986,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22809,18 +22998,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22830,23 +23021,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -nu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_ci.cpp -o annot_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_info.cpp -o tse_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22862,9 +23048,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22880,9 +23066,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22898,9 +23084,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22916,9 +23102,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22928,18 +23114,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22949,225 +23137,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ --path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/track_data.cpp -o track_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/phrap.cpp -o phrap.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp -o reader_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp:473:18: warning: 'CGFFReader' is deprecated [-Wdeprecated-declarations] - 473 | CRef - | ^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_reader.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff_reader.hpp:71:44: note: declared here - 71 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGFFReader - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o -/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp -ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqalign_util.a -/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqalign_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:61: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o -/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxnetblastcli.so -/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xnetblastcli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -cd objtools/blast/services/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services TMPL=blast_services -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:88: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp: In constructor 'ncbi::objects::CReaderBase::CReaderBase(ncbi::objects::CReaderBase::TReaderFlags, const string&, const string&, ncbi::objects::CReaderBase::SeqIdResolver, ncbi::objects::CReaderListener*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp:374:19: warning: 'ncbi::objects::CReaderBase::mSeqIdResolve' will be initialized after [-Wreorder] - 374 | SeqIdResolver mSeqIdResolve; - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/reader_base.hpp:371:29: warning: 'std::unique_ptr ncbi::objects::CReaderBase::m_pTrackDefaults' [-Wreorder] - 371 | unique_ptr m_pTrackDefaults; - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/reader_base.cpp:155:1: warning: when initialized here [-Wreorder] - 155 | CReaderBase::CReaderBase( - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:99:27: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] - 99 | CGff3SofaTypes& SofaTypes(); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here - 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:53:27: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] - 53 | CGff3SofaTypes& SofaTypes() - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here - 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp: In function 'ncbi::objects::CGff3SofaTypes& ncbi::objects::SofaTypes()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:56:24: warning: 'CGff3SofaTypes' is deprecated [-Wdeprecated-declarations] - 56 | static CSafeStatic m_Lookup; - | ^~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/gff3_sofa.hpp:72:44: note: declared here - 72 | class NCBI_DEPRECATED NCBI_XOBJREAD_EXPORT CGff3SofaTypes - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp: In constructor 'ncbi::objects::CGff3SofaTypes::CGff3SofaTypes()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:67:14: warning: 'CSofaMap' is deprecated [-Wdeprecated-declarations] - 67 | CSofaMap SofaMap; - | ^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp:38: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/seq/sofa_map.hpp:43:39: note: declared here - 43 | class NCBI_DEPRECATED NCBI_SEQ_EXPORT CSofaMap - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp: In member function 'ncbi::CRef ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp:554:44: warning: enum constant in boolean context [-Wint-in-bool-context] - 554 | if (fRemoveRedundancy && m_Library && - | ^~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o -/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp -ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_unit_test_util.a -/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_unit_test_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, ncbi::objects::CFeatureTableReader_Imp::EQual, const string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/readfeat.cpp:1410:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1410 | } catch( CStringException ) { - | ^~~~~~~~~~~~~~~~ --D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/priority.cpp -o priority.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/readfeat.cpp -o readfeat.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBU-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope.cpp -o scope.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/imake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o -/bin/rm -f libblast_services.so .libblast_services.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_services.so -/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_services.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -G -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_reader.cpp -o psl_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o -/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp -ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_app_util.a -/bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_app_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:817:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 817 | for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:906:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 906 | for (auto i=0; i)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/gff2_reader.cpp:991:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 991 | for (auto i=0; i::size_type' {aka 'unsigned int'} [-Wsign-compare] - 144 | if (mBlockCount != mBlockSizes.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp:150:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 150 | if (mBlockCount != mBlockStartsQ.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 156 | if (mBlockCount != mBlockStartsT.size()) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -nclude /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23183,9 +23167,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23201,9 +23185,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23219,9 +23203,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23237,9 +23221,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23249,18 +23233,26 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23270,63 +23262,98 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/psl_data.cpp -o psl_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'bool ncbi::objects::{anonymous}::x_FindBrackets(const ncbi::CTempString&, size_t&, size_t&, size_t&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:298:14: warning: unused variable 'found' [-Wunused-variable] - 298 | bool found = false; - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const ncbi::objects::CSourceModParser::SMod*, const ncbi::objects::CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:879:20: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare] - 879 | for (int i=0; i&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:915:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 915 | for (auto i=0; i instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:45: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +-Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.so .libxobjread.so.stamp /usr/bin/g++ -std=gnu++14 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o bed_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lxutil -lxlogging -lpub -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib @@ -23334,104 +23361,111 @@ /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -TRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edit_saver.cpp -o edit_saver.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o +/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp +ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_unit_test_util.a +/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/annot_finder.cpp -o annot_finder.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split_parser.cpp -o split_parser.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread +/usr/bin/g++ -std=gnu++14 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_infmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o +/bin/rm -f libblast_services.so .libblast_services.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_services.so +/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_services.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' +o.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib /bin/ln -f libxobjmgr.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxobjmgr.so /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null -cd objmgr/util/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -cd algo/dustmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null +cd objmgr/util/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +cd algo/dustmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/segmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd objmgr/split/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/segmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objmgr/split/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util TMPL=util -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split TMPL=id2_split -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util TMPL=util -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o @@ -23445,33 +23479,42 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/sharemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o +/usr/bin/g++ -stdmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include 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-I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. 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-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/sh -std=gnu++14 -c -Wall -Wno-format-y2k -pthread 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-I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE are/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/id_range.cpp -o id_range.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/size.cpp -o size.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 51 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In member function 'char* ncbi::CSeqDBAtlas::Alloc(size_t, ncbi::CSeqDBLockHold&, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:359:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] - 359 | catch(std::bad_alloc) { - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: 'void ncbi::s_SeqDB_FileNotFound(const string&)' defined but not used [-Wunused-function] - 160 | static void s_SeqDB_FileNotFound(const string & fname) - | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const string&, std::vector&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:834:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 834 | if (((endp - beginp) < 2U) @@ -23484,6 +23527,60 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1098:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] 1098 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) | ~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector >&, std::vector >&, std::vector&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] + 1001 | int found_short(-1); + | ^~~~~~~~~~~ +specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In member function 'char* ncbi::CSeqDBAtlas::Alloc(size_t, ncbi::CSeqDBLockHold&, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:359:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] + 359 | catch(std::bad_alloc) { + | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: 'void ncbi::s_SeqDB_FileNotFound(const string&)' defined but not used [-Wunused-function] + 160 | static void s_SeqDB_FileNotFound(const string & fname) + | ^~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o +/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp +ar cr libblast_app_util.a blast_app_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblast_app_util.a +/bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blast_app_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp:1034:10: warning: unused variable 'added' [-Wunused-variable] + 1034 | bool added = false, rval = false; + | ^~~~~ +=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef.cpp -o autodef.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o +/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC segmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgosegmask.so +/bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgosegmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1824:81: required from here +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] + 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const string&)' defined but not used [-Wunused-function] + 1114 | static bool s_IsValidAccession(const string& acc) + | ^~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp @@ -23493,6 +23590,13 @@ /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] + 363 | } catch (CObjmgrUtilException) { + | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDBLockHold&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1518:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1518 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TS2PFlags, ncbi::objects::CScope*, int*)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:703:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 703 | } catch (CObjmgrUtilException) { @@ -23504,16 +23608,26 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:751:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 751 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ -are/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/id_range.cpp -o id_range.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/size.cpp -o size.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, ncbi::objects::SRelLoc::TFlags) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2776:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable] + 2776 | TIndx map_end = 0; + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 612 | } catch (CException) { + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, ncbi::objects::SRelLoc::TFlags) const': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:4612:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 4612 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp: In function 'int ncbi::objects::SkipMixedContent(const char*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp:3576:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 3576 | for (int i = 0; i < sizeof (mixedTags); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::string)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp:3653:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 3653 | for (int i = 0; i < str.length(); i++) { + | ~~^~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp: In instantiation of 'void ncbi::objects::x_Translate(const Container&, std::string&, int, const ncbi::objects::CGenetic_code*, bool, bool, bool, bool, bool*) [with Container = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:3953:99: required from here /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:3496:43: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] @@ -23522,39 +23636,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp: In instantiation of 'void ncbi::objects::x_Translate(const Container&, std::string&, int, const ncbi::objects::CGenetic_code*, bool, bool, bool, bool, bool*) [with Container = ncbi::objects::CSeqVector; std::string = std::__cxx11::basic_string]': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:3981:99: required from here /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/sequence.cpp:3496:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o -/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC segmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgosegmask.so -/bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgosegmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDBLockHold&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1518:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1518 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2776:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable] - 2776 | TIndx map_end = 0; - | ^~~~~~~ -/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector >&, std::vector >&, std::vector&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] - 1001 | int found_short(-1); - | ^~~~~~~~~~~ - -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp:2117:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] 2117 | if (offset > 0 && offset < m_MainTitle.length()) { | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ @@ -23570,61 +23652,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/create_defline.cpp:3637:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 3637 | for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1824:81: required from here -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare] - 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const string&)' defined but not used [-Wunused-function] - 1114 | static bool s_IsValidAccession(const string& acc) - | ^~~~~~~~~~~~~~~~~~ --D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/objutil.cpp -o objutil.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o -/usr/bin/g++ -std/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 612 | } catch (CException) { - | ^~~~~~~~~~ -=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef.cpp -o autodef.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFIL/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp:1034:10: warning: unused variable 'added' [-Wunused-variable] - 1034 | bool added = false, rval = false; - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] - 363 | } catch (CObjmgrUtilException) { - | ^~~~~~~~~~~~~~~~~~~~ -++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o -/bin/rm -f libid2_split.so .libid2_split.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libid2_split.so -/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.id2_split.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp: In function 'int ncbi::objects::SkipMixedContent(const char*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp:3576:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 3576 | for (int i = 0; i < sizeof (mixedTags); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::string)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/indexer.cpp:3653:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 3653 | for (int i = 0; i < str.length(); i++) { - | ~~^~~~~~~~~~~~~~ DB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp -o seqdb_lmdb.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/seqdblmdbset.cpp -o seqdblmdbset.o @@ -23636,46 +23663,53 @@ /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j8 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o wriIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:66: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -23791,10 +23825,72 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp: In member function 'void ncbi::CWriteDB_LMDB::x_CommitTransaction()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:295:42: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] + 295 | unsigned int num_threads = GetCpuCount(); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbifile.hpp:53, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here + 479 | unsigned int GetCpuCount(void) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp: In constructor 'ncbi::CFastaBioseqSource::CFastaBioseqSource(ncbi::CNcbiIstream&, bool, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:709:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 709 | int iflags = CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:709:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 709 | int iflags = CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:720:33: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 720 | iflags |= CFastaReader::fAllSeqIds | CFastaReader::fRequireID; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:720:33: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 720 | iflags |= CFastaReader::fAllSeqIds | CFastaReader::fRequireID; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:66: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o +/bin/rm -f libid2_split.so .libid2_split.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libid2_split.so +/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.id2_split.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp -ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp +ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader.a @@ -23804,71 +23900,39 @@ /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:66: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -tedb_gimask.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp: In member function 'void ncbi::CWriteDB_LMDB::x_CommitTransaction()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:295:42: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] - 295 | unsigned int num_threads = GetCpuCount(); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbifile.hpp:53, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here - 479 | unsigned int GetCpuCount(void) - | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o @@ -23880,46 +23944,17 @@ /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp: In constructor 'ncbi::CFastaBioseqSource::CFastaBioseqSource(ncbi::CNcbiIstream&, bool, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:709:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 709 | int iflags = CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:709:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 709 | int iflags = CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:720:33: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 720 | iflags |= CFastaReader::fAllSeqIds | CFastaReader::fRequireID; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:720:33: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 720 | iflags |= CFastaReader::fAllSeqIds | CFastaReader::fRequireID; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. E_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.so .libxobjutil.so.stamp @@ -23929,28 +23964,90 @@ /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -cd objtools/seqmasks_io/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/dbindex/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/seqmasks_io/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/dbindex/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/alnmgr/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/edit/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j15 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit TMPL=edit -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o @@ -23958,113 +24055,10 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o -/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp -ar cr libncbi_xreader_id2.a reader_id2.o -/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a -/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so -/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/alnmgr/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blast_services_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_services_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 52 | objects::CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o -/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp -ar cr libncbi_xreader_id1.a reader_id1.o -/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a -/bin/ln -f .ncbi_xreader_id1-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id1-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id1.so -/bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd objtools/edit/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit TMPL=edit -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp -o seq_entry_edit.o @@ -24072,50 +24066,27 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/apply_object.cpp -o apply_object.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -We/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] - 306 | unsigned long tmp; - | ^~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 658 | string idstr = objects::sequence::GetTitle( bsh ); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here - 289 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1472:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 1472 | for (TNumrow row = 0; row < selected_rows.size(); row++) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o -/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp -ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a -/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so -/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Wemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -rror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reWerror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -24206,12 +24177,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -24227,90 +24198,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o -/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqmasks_io.so -/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqmasks_io.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 49 | CSeqFormatterConfig config /* = CSeqFormatterConfig() */) - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 270 | void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ - -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o -/bin/rm -f libwritedb.so .libwritedb.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libwritedb.so -/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.writedb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -24401,12 +24290,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -24422,97 +24311,55 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:91: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] - 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here - 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:87: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] - 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here - 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 76 | match1->m_ChainScore == match2->m_ChainScore && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 77 | match1->m_Score > match2->m_Score || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 192 | (aln_seq1->m_StrandScore > 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 193 | strand1 == eNa_strand_minus || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 196 | aln_seq2->m_StrandScore > 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 197 | strand2 == eNa_strand_minus || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 198 | aln_seq2->m_StrandScore < 0 && - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ - 199 | strand2 != eNa_strand_minus)) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o -/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so -/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j8 --jobserver-auth=7,8 all -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison of integer expressions of different signedness: 'const unsigned int' and 'int' [-Wsign-compare] - 1210 | if (start_its_i->second->first != -1) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, ncbi::objects::edit::CPromote::TRnaMap*) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp:228:68: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ncbi::objects::CCdregion_translate::ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] - 228 | remove_trailingX); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp:52: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:936:17: note: declared here - 936 | static void TranslateCdregion(string& prot, - | ^~~~~~~~~~~~~~~~~ + -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o +/bin/rm -f libwritedb.so .libwritedb.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libwritedb.so +/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.writedb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp: In static member function 'static ncbi::objects::edit::CDBLinkField::EDBLinkFieldType ncbi::objects::edit::CDBLinkField::GetTypeForLabel(std::string)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp:283:17: warning: variable 'normal' set but not used [-Wunused-but-set-variable] + 283 | CTempString normal = GetNormalizedDBLinkFieldName(label); + | ^~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24528,9 +24375,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24546,9 +24393,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24564,9 +24411,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24582,9 +24429,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24595,19 +24442,19 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24617,48 +24464,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In member function 'void ncbi::objects::edit::{anonymous}::CSeqdescSortMap::Init()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:172:39: warning: array subscript has type 'char' [-Wchar-subscripts] - 172 | while (descr_insert_order[index] != 0) - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:174:40: warning: array subscript has type 'char' [-Wchar-subscripts] - 174 | if (descr_insert_order[index] >= size()) - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:174:47: warning: comparison of integer expressions of different signedness: 'char' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 174 | if (descr_insert_order[index] >= size()) - | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:175:47: warning: array subscript has type 'char' [-Wchar-subscripts] - 175 | resize(descr_insert_order[index], kMax_Char); - | ^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:176:39: warning: array subscript has type 'char' [-Wchar-subscripts] - 176 | at(descr_insert_order[index]) = index; - | ^~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -llmdb -lpthread -ldl -lm -lpthread -o gene_info_reader -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gene_info_reader -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -24749,12 +24557,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -24770,18 +24580,144 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 76 | match1->m_ChainScore == match2->m_ChainScore && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 77 | match1->m_Score > match2->m_Score || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 192 | (aln_seq1->m_StrandScore > 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 193 | strand1 == eNa_strand_minus || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 196 | aln_seq2->m_StrandScore > 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 197 | strand2 == eNa_strand_minus || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 198 | aln_seq2->m_StrandScore < 0 && + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ + 199 | strand2 != eNa_strand_minus)) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1472:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 1472 | for (TNumrow row = 0; row < selected_rows.size(); row++) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:52:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 52 | objects::CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:59: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] + 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here + 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:153:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 153 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:91: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] + 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here + 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp: In function 'void ncbi::{anonymous}::xLinkCDSmRNAbyLabelAndLocation(ncbi::objects::CSeq_annot_Base::C_Data::TFtable&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp:135:13: warning: unused variable 'best_fit_size' [-Wunused-variable] + 135 | int best_fit_size = -1; + | ^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o seqdb_demo +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_demo +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In static member function 'static std::vector > ncbi::objects::edit::CSeqIdGuesser::GetIdStrings(ncbi::objects::CBioseq_Handle)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:171:87: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] + 171 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objects/general/Dbtag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:31: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here + 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp: In function 'void ncbi::objects::edit::MakeMailReportPostReport(ncbi::objects::CSeq_table&, ncbi::objects::CScope&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp:103:13: warning: unused variable 'taxid' [-Wunused-variable] + 103 | int taxid = 0; + | ^~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24797,9 +24733,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24815,9 +24751,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24833,9 +24769,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24851,9 +24787,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24864,19 +24800,19 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24886,89 +24822,26 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1823:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1823 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1825:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1825 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1848:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1848 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { - | ~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 1850 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { - | ~~~~~~^~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o -/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o -/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o -/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o -/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o -/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scrip/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::TrimSeqData(ncbi::objects::CBioseq_Handle, ncbi::CRef, const TCuts&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] - 2431 | switch (seqmap_ci.GetType()) { - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2787:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2787 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2787:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 2787 | if (pos >= start && pos < start + len) { - | ~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::TrimSeqAlign(ncbi::objects::CBioseq_Handle, ncbi::CRef, const TCuts&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2991:32: warning: comparison of integer expressions of different signedness: 'ncbi::TSignedSeqPos' {aka 'int'} and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] - 2991 | else if (seg_start < cut_from) { - | ~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2994:32: warning: comparison of integer expressions of different signedness: 'ncbi::TSignedSeqPos' {aka 'int'} and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] - 2994 | else if (seg_start >= cut_from && - | ~~~~~~~~~~^~~~~~~~~~~ -ts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so -/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd algo/winmask/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/sh/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:59: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] - 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here - 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:153:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 153 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34: +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -llmdb -lpthread -ldl -lm -lpthread -o gene_info_reader +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gene_info_reader +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25059,14 +24932,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25079,6 +24950,27 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -25088,9 +24980,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -25106,9 +24998,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -25124,9 +25016,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -25142,9 +25034,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -25154,11 +25046,253 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_min.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp:37: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison of integer expressions of different signedness: 'const unsigned int' and 'int' [-Wsign-compare] + 1210 | if (start_its_i->second->first != -1) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:41: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 311 | if (plus && prev_start_plus_len < start || + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In function 'ncbi::CRef s_FastaStringToBioseq(const string&, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:598:44: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 598 | TFlags flags = (TFlags) (CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:598:44: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 598 | TFlags flags = (TFlags) (CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const TSignedRange&, bool) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomy::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2545:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2545 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2545:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2545 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomyFromMap::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2581:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2581 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2581:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2581 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomyFromMapLclIds::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2619:51: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2619 | CFastaReader::fAssumeProt | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2619:51: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 2619 | CFastaReader::fAssumeProt | CFastaReader::fAllSeqIds; + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2853:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow] + 2853 | const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion" + | ~~~~~~~~~~~~~~~~~~~^~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blast_services_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_services_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o writedb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp: In constructor 'ncbi::objects::edit::CFeatTableEdit::CFeatTableEdit(ncbi::objects::CSeq_annot&, const string&, unsigned int, unsigned int, ncbi::objects::IObjtoolsListener*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:187:24: warning: 'ncbi::objects::edit::CFeatTableEdit::mpMessageListener' will be initialized after [-Wreorder] + 187 | IObjtoolsListener* mpMessageListener; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:92:18: warning: 'unsigned int ncbi::objects::edit::CFeatTableEdit::mNextFeatId' [-Wreorder] + 92 | unsigned int mNextFeatId = 1; + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] + 114 | CFeatTableEdit::CFeatTableEdit( + | ^~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:92:18: warning: 'ncbi::objects::edit::CFeatTableEdit::mNextFeatId' will be initialized after [-Wreorder] + 92 | unsigned int mNextFeatId = 1; + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:91:18: warning: 'unsigned int ncbi::objects::edit::CFeatTableEdit::mLocusTagNumber' [-Wreorder] + 91 | unsigned int mLocusTagNumber = 1; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] + 114 | CFeatTableEdit::CFeatTableEdit( + | ^~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:91:18: warning: 'ncbi::objects::edit::CFeatTableEdit::mLocusTagNumber' will be initialized after [-Wreorder] + 91 | unsigned int mLocusTagNumber = 1; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:90:12: warning: 'std::string ncbi::objects::edit::CFeatTableEdit::mLocusTagPrefix' [-Wreorder] + 90 | string mLocusTagPrefix; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] + 114 | CFeatTableEdit::CFeatTableEdit( + | ^~~~~~~~~~~~~~ +alnsegments.cpp -o alnsegments.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_Lproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DND/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp:261:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 261 | for (int j = i + 1; j < spans.size(); j++) + | ~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp: In member function 'void ncbi::objects::edit::CRemoteUpdater::UpdateOrgFromTaxon(ncbi::objects::edit::CRemoteUpdater::FLogger, ncbi::objects::CSeq_entry_EditHandle&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp:608:59: warning: 'void ncbi::objects::edit::CRemoteUpdater::UpdateOrgFromTaxon(ncbi::objects::edit::CRemoteUpdater::FLogger, ncbi::objects::CSeqdesc&)' is deprecated [-Wdeprecated-declarations] + 608 | UpdateOrgFromTaxon(logger, (CSeqdesc&)*desc_it); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp:298:6: note: declared here + 298 | void CRemoteUpdater::UpdateOrgFromTaxon(FLogger logger, CSeqdesc& obj) + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const string&, const string&, ncbi::SIZE_TYPE, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:73: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] + 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here + 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, + | ^~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25249,14 +25383,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25269,11 +25401,146 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +EBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/obj/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp: In member function 'ncbi::TSignedSeqPos ncbi::objects::edit::CFeaturePropagator::SeqPosToAlignPos(ncbi::TSignedSeqPos, ncbi::objects::CDense_seg_Base::TDim, bool, bool&, bool&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:274:19: warning: unused variable 'length' [-Wunused-variable] + 274 | TSignedSeqPos length = bsh.GetBioseqLength(); + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp: In member function 'ncbi::TSignedSeqPos ncbi::objects::edit::CFeaturePropagator::AlignPosToSeqPos(ncbi::TSignedSeqPos, ncbi::objects::CDense_seg_Base::TDim, bool, bool&, bool&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:373:31: warning: unused variable 'len' [-Wunused-variable] + 373 | TSignedSeqPos len = denseg.GetLens()[seg]; + | ^~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:330:19: warning: unused variable 'length' [-Wunused-variable] + 330 | TSignedSeqPos length = bsh.GetBioseqLength(); + | ^~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const string&)' defined but not used [-Wunused-function] + 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) + | ^~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o writedb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/writedb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o +/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp +/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp +ar cr libncbi_xreader_id2.a reader_id2.o +/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a +/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so +/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -llmdb -lpthread -ldl -lm -lpthread -o seqdb_perf +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_perf +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 49 | CSeqFormatterConfig config /* = CSeqFormatterConfig() */) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 270 | void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o +/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp +/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp +ar cr libncbi_xreader_id1.a reader_id1.o +/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a +/bin/ln -f .ncbi_xreader_id1-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id1-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_id1.so +/bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o +/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp +/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp +ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o +/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a +/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so +/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp:66: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ @@ -25287,12 +25554,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25305,12 +25569,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25323,12 +25590,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25341,74 +25605,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -rror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp -o dblink_field.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:41: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp: In static member function 'static ncbi::objects::edit::CDBLinkField::EDBLinkFieldType ncbi::objects::edit::CDBLinkField::GetTypeForLabel(std::string)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/dblink_field.cpp:283:17: warning: variable 'normal' set but not used [-Wunused-but-set-variable] - 283 | CTempString normal = GetNormalizedDBLinkFieldName(label); - | ^~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp:36: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o seqdb_demo -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_demo -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp:66: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25421,12 +25626,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25439,11 +25641,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ @@ -25457,12 +25662,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25481,6 +25683,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25496,12 +25701,31 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp:66: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp:66: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25518,7 +25742,60 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp:66: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o +/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libseqmasks_io.so +/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.seqmasks_io.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd algo/winmask/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_ascii.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25609,73 +25886,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp:63: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 311 | if (plus && prev_start_plus_len < start || - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o -/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblastdb_format.so -/bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blastdb_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -llmdb -lpthread -ldl -lm -lpthread -o seqdb_perf -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_perf -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_ascii.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25766,35 +25980,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_ascii.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25885,9 +26075,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_min.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25921,9 +26121,27 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25939,9 +26157,60 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -25963,6 +26232,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25978,14 +26250,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -25998,12 +26262,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_score_mean.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26094,29 +26360,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp:35: @@ -26210,20 +26453,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp: In function 'void ncbi::{anonymous}::xLinkCDSmRNAbyLabelAndLocation(ncbi::objects::CSeq_annot_Base::C_Data::TFtable&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp:135:13: warning: unused variable 'best_fit_size' [-Wunused-variable] - 135 | int best_fit_size = -1; - | ^~~~~~~~~~~~~ -are/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_ascii.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:37: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26314,30 +26547,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:46: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:42, @@ -26433,9 +26642,9 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26526,32 +26735,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -alnsegments.cpp -o alnsegments.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In function 'ncbi::CRef s_FastaStringToBioseq(const string&, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:598:44: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 598 | TFlags flags = (TFlags) (CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:598:44: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 598 | TFlags flags = (TFlags) (CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmasIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:42: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26642,55 +26835,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomy::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2545:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2545 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2545:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2545 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomyFromMap::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2581:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2581 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2581:50: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2581 | CFastaReader::fAssumeNuc | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CWriteDB_SetTaxonomyFromMapLclIds::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2619:51: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2619 | CFastaReader::fAssumeProt | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2619:51: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 2619 | CFastaReader::fAssumeProt | CFastaReader::fAllSeqIds; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2853:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow] - 2853 | const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion" - | ~~~~~~~~~~~~~~~~~~~^~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_bin.hpp:36, @@ -26785,16 +26929,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ - -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmasIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:42: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26885,24 +27024,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:82: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:75: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] - 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here - 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, +k/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specsIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -26993,39 +27126,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp:38: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o writedb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/writedb_lmdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j8 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:40, @@ -27120,12 +27220,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp:40: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -27216,18 +27313,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27243,9 +27341,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27261,9 +27359,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27279,9 +27377,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27297,9 +27395,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27309,33 +27407,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_cache_boost.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -27426,72 +27501,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const TSignedRange&, bool) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -k/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specsIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_cache_boost.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp:40: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:50, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27507,9 +27529,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27525,9 +27547,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27543,9 +27565,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27561,9 +27583,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27573,6 +27595,48 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp:32: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -27624,30 +27688,141 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -producible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DND/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp: In function 'void ncbi::objects::edit::MakeMailReportPostReport(ncbi::objects::CSeq_table&, ncbi::objects::CScope&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/mail_report.cpp:103:13: warning: unused variable 'taxid' [-Wunused-variable] - 103 | int taxid = 0; - | ^~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_ostat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:50, +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o +/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so +/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 130 | string id_str = sequence::GetTitle( bsh ); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here + 289 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] + 181 | if(type == eAny || type >= eGenerateMasksWithDuster) + | ^~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' + 185 | arg_desc.AddDefaultKey( "dust_level", "dust_level", + | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o +/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp +/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp +ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o +/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lpsg_client -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a +/bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.so +/bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_genbank.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd objtools/simple/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null +cd app/dustmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27663,9 +27838,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27681,9 +27856,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27699,9 +27874,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27717,9 +27892,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27729,68 +27904,41 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp: In constructor 'ncbi::objects::edit::CFeatTableEdit::CFeatTableEdit(ncbi::objects::CSeq_annot&, const string&, unsigned int, unsigned int, ncbi::objects::IObjtoolsListener*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:187:24: warning: 'ncbi::objects::edit::CFeatTableEdit::mpMessageListener' will be initialized after [-Wreorder] - 187 | IObjtoolsListener* mpMessageListener; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:92:18: warning: 'unsigned int ncbi::objects::edit::CFeatTableEdit::mNextFeatId' [-Wreorder] - 92 | unsigned int mNextFeatId = 1; - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] - 114 | CFeatTableEdit::CFeatTableEdit( - | ^~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:92:18: warning: 'ncbi::objects::edit::CFeatTableEdit::mNextFeatId' will be initialized after [-Wreorder] - 92 | unsigned int mNextFeatId = 1; - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:91:18: warning: 'unsigned int ncbi::objects::edit::CFeatTableEdit::mLocusTagNumber' [-Wreorder] - 91 | unsigned int mLocusTagNumber = 1; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] - 114 | CFeatTableEdit::CFeatTableEdit( - | ^~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:91:18: warning: 'ncbi::objects::edit::CFeatTableEdit::mLocusTagNumber' will be initialized after [-Wreorder] - 91 | unsigned int mLocusTagNumber = 1; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/feattable_edit.hpp:90:12: warning: 'std::string ncbi::objects::edit::CFeatTableEdit::mLocusTagPrefix' [-Wreorder] - 90 | string mLocusTagPrefix; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feattable_edit.cpp:114:1: warning: when initialized here [-Wreorder] - 114 | CFeatTableEdit::CFeatTableEdit( - | ^~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o makembindex -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/makembindex -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27806,9 +27954,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27824,9 +27972,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27842,9 +27990,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27860,9 +28008,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27872,20 +28020,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27895,18 +28043,42 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o +/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgowinmask.so +/bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgowinmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' +cd app/winmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27922,9 +28094,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27940,9 +28112,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27958,9 +28130,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27976,9 +28148,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -27988,20 +28160,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -28011,13 +28183,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp:261:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 261 | for (int j = i + 1; j < spans.size(); j++) - | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp:32: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -28108,40 +28278,10 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp: In function 'ncbi::SIZE_TYPE ncbi::objects::edit::FindWithOptions(const string&, const string&, ncbi::SIZE_TYPE, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp:47:73: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations] - 47 | pos = NStr::Find(str, pattern, pos, NPOS, NStr::eFirst, str_case); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/edit/parse_text_options.hpp:34, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp:33: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:5308:11: note: declared here - 5308 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, - | ^~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -EBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp -o external_annots.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -28232,12 +28372,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:63: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/external_annots.cpp:36: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -28253,138 +28396,47 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -ldl -lm -lpthread -o seqdb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp: In member function 'void ncbi::objects::edit::CRemoteUpdater::UpdateOrgFromTaxon(ncbi::objects::edit::CRemoteUpdater::FLogger, ncbi::objects::CSeq_entry_EditHandle&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp:608:59: warning: 'void ncbi::objects::edit::CRemoteUpdater::UpdateOrgFromTaxon(ncbi::objects::edit::CRemoteUpdater::FLogger, ncbi::objects::CSeqdesc&)' is deprecated [-Wdeprecated-declarations] - 608 | UpdateOrgFromTaxon(logger, (CSeqdesc&)*desc_it); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/remote_updater.cpp:298:6: note: declared here - 298 | void CRemoteUpdater::UpdateOrgFromTaxon(FLogger logger, CSeqdesc& obj) - | ^~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:40: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4227:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow] - 4227 | const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion" - | ~~~~~~~~~~~~~~~~~~~^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 130 | string id_str = sequence::GetTitle( bsh ); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here - 289 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:58: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] 94 | objects::CFastaReader::fAllSeqIds | | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:41: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:58: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] 94 | objects::CFastaReader::fAllSeqIds | | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/win_mask_gen_counts.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp:53: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:41: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o +/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC simple_om.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxobjsimple.so +/bin/ln -f .xobjsimple.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjsimple.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:52: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] 94 | objects::CFastaReader::fAllSeqIds | | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:52: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] 94 | objects::CFastaReader::fAllSeqIds | | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:38: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] - 181 | if(type == eAny || type >= eGenerateMasksWithDuster) - | ^~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' - 185 | arg_desc.AddDefaultKey( "dust_level", "dust_level", - | ^~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -28397,208 +28449,149 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:51: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 55 | BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout), - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' - 123 | S; \ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:122:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 122 | #define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get() - | ^~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' - 123 | S; \ - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:123:19: note: in expansion of macro 'NcbiEmptyString' - 123 | #define kEmptyStr NcbiEmptyString - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr' - 62 | BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout), - | ^~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 69 | CSeqFormatterConfig config; - | ^~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 71 | BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config), - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' - 123 | S; \ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 78 | CSeqFormatterConfig config; - | ^~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 94 | CSeqFormatter f(*itr, db, std::cout, config); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 98 | CSeqFormatter f("%m", db, std::cout, config); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 109 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 151 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 195 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 228 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 259 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 284 | CSeqFormatter f(format_spec, db, out); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 314 | CSeqFormatterConfig config; - | ^~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 319 | CSeqFormatter f(format_spec, db, out, config); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] - 358 | CSeqFormatterConfig config; - | ^~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here - 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] - 361 | CSeqFormatter f(format_spec, db, out, config); - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here - 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter - | ^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. 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/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o -/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp -ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lpsg_client -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a -/bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_genbank.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.so -/bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.ncbi_xloader_genbank.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd objtools/simple/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null -cd app/dustmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp -o main.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o dustmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/dustmasker make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/simple TMPL=xobjsimple -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker TMPL=dustmasker -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -ldl -lm -lpthread -o seqdb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp -o main.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o windowmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/windowmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:82: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:463:75: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] + 463 | AdjustProteinMolInfoToMatchCDS(new_molinfo_desc->SetMolinfo(), cds); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/cds_fix.cpp:366:6: note: declared here + 366 | bool AdjustProteinMolInfoToMatchCDS(CMolInfo& molinfo, const CSeq_feat& cds) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, ncbi::objects::edit::CPromote::TRnaMap*) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp:228:68: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ncbi::objects::CCdregion_translate::ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] + 228 | remove_trailingX); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/promote.cpp:52: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:936:17: note: declared here + 936 | static void TranslateCdregion(string& prot, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4227:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow] + 4227 | const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion" + | ~~~~~~~~~~~~~~~~~~~^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In member function 'void ncbi::objects::edit::{anonymous}::CSeqdescSortMap::Init()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:172:39: warning: array subscript has type 'char' [-Wchar-subscripts] + 172 | while (descr_insert_order[index] != 0) + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:174:40: warning: array subscript has type 'char' [-Wchar-subscripts] + 174 | if (descr_insert_order[index] >= size()) + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:174:47: warning: comparison of integer expressions of different signedness: 'char' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 174 | if (descr_insert_order[index] >= size()) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:175:47: warning: array subscript has type 'char' [-Wchar-subscripts] + 175 | resize(descr_insert_order[index], kMax_Char); + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:176:39: warning: array subscript has type 'char' [-Wchar-subscripts] + 176 | at(descr_insert_order[index]) = index; + | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1823:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1823 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1825:74: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1825 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1848:63: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1848 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { + | ~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:66: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 1850 | } else if (n_len >= min_known && (max_known < 0 || n_len <= max_known)) { + | ~~~~~~^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::TrimSeqData(ncbi::objects::CBioseq_Handle, ncbi::CRef, const TCuts&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqSubMap' not handled in switch [-Wswitch] + 2431 | switch (seqmap_ci.GetType()) { + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqRef' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqEnd' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqChunk' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2431:16: warning: enumeration value 'eSeqLiteral' not handled in switch [-Wswitch] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'bool ncbi::objects::edit::s_FindSegment(const ncbi::objects::CDense_seg&, ncbi::objects::CDense_seg_Base::TDim, ncbi::TSeqPos, ncbi::objects::CDense_seg_Base::TNumseg&, ncbi::TSeqPos&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2787:21: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2787 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2787:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 2787 | if (pos >= start && pos < start + len) { + | ~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::TrimSeqAlign(ncbi::objects::CBioseq_Handle, ncbi::CRef, const TCuts&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2991:32: warning: comparison of integer expressions of different signedness: 'ncbi::TSignedSeqPos' {aka 'int'} and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] + 2991 | else if (seg_start < cut_from) { + | ~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2994:32: warning: comparison of integer expressions of different signedness: 'ncbi::TSignedSeqPos' {aka 'int'} and 'ncbi::TSeqPos' {aka 'unsigned int'} [-Wsign-compare] + 2994 | else if (seg_start >= cut_from && + | ~~~~~~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 658 | string idstr = objects::sequence::GetTitle( bsh ); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here + 289 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] + 306 | unsigned long tmp; + | ^~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o +/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o +/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o +/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o +/usr/bin/g++ -std=gnu++14 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o +/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so +/bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -28689,14 +28682,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -28713,8 +28706,8 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -28805,14 +28798,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -28839,17 +28832,28 @@ /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/alnmgr' -cd objtools/align_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/align_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format TMPL=align_format -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o @@ -28857,18 +28861,20 @@ /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp -o tabular.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o -/usr/bin/g++ -std=gnu+/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp: In member function 'ncbi::TSignedSeqPos ncbi::objects::edit::CFeaturePropagator::SeqPosToAlignPos(ncbi::TSignedSeqPos, ncbi::objects::CDense_seg_Base::TDim, bool, bool&, bool&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:274:19: warning: unused variable 'length' [-Wunused-variable] - 274 | TSignedSeqPos length = bsh.GetBioseqLength(); - | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp: In member function 'ncbi::TSignedSeqPos ncbi::objects::edit::CFeaturePropagator::AlignPosToSeqPos(ncbi::TSignedSeqPos, ncbi::objects::CDense_seg_Base::TDim, bool, bool&, bool&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:373:31: warning: unused variable 'len' [-Wunused-variable] - 373 | TSignedSeqPos len = denseg.GetLens()[seg]; - | ^~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/feature_propagate.cpp:330:19: warning: unused variable 'length' [-Wunused-variable] - 330 | TSignedSeqPos length = bsh.GetBioseqLength(); - | ^~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, +/usr/bin/g++ -std=gnu+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp:46: @@ -28988,10 +28994,147 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp:46: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp:46: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -29085,7 +29228,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -29093,7 +29236,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29110,32 +29253,8 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp:46: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/align_format_util.cpp:46: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -29143,7 +29262,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29162,7 +29281,8 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -29255,14 +29375,16 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29279,14 +29401,16 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showdefline.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29305,8 +29429,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -29399,16 +29522,14 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29425,16 +29546,14 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/tabular.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:77: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -29593,51 +29712,41 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const string&)' defined but not used [-Wunused-function] - 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) - | ^~~~~~~~~~~~~~~~~~~~~~~~ -=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o -/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxalgowinmask.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxalgowinmask.so -/bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xalgowinmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' -cd algo/blast/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api TMPL=xblast -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o -/usr/bin/g++ -std=gnu++14 -c -Wall -WIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o +/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblastdb_format.so +/bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blastdb_format.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29653,9 +29762,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29671,9 +29780,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29689,9 +29798,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29707,9 +29816,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29719,18 +29828,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_setup_cxx.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29740,62 +29851,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:58: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:58: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -ldl -lm -lpthread -o blastdb_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdb_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -cd app/winmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o -/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC simple_om.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxobjsimple.so -/bin/ln -f .xobjsimple.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjsimple.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker TMPL=winmasker -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29811,9 +29878,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29829,9 +29896,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29847,9 +29914,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29865,9 +29932,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29877,20 +29944,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29900,6 +29967,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 100 | return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 106 | m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function 'bool ncbi::blast::CBlastOptionsLocal::Validate() const': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp:387:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 387 | else @@ -29907,24 +29992,324 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_local_priv.cpp:396:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 396 | return true; | ^~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'virtual void ncbi::align_format::CDisplaySeqalign::x_DisplayRowData(ncbi::align_format::CDisplaySeqalign::SAlnRowInfo*, ncbi::CNcbiOstream&)': +pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_F/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'virtual void ncbi::align_format::CDisplaySeqalign::x_DisplayRowData(ncbi::align_format::CDisplaySeqalign::SAlnRowInfo*, ncbi::CNcbiOstream&)': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:1451:69: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1451 | if(m_QueryAnchoredSetIndex != -1 && m_QueryAnchoredSetIndex != rowSetsCount) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:2104:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 2104 | } catch (CException e){ + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:4446:49: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 4446 | for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:4446:81: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] + 4446 | for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ + | ~~^~~~~~~~~~~~~~~~~~~~ +ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/builIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:39: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 96 | void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 55 | BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout), + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' + 123 | S; \ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:122:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 122 | #define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get() + | ^~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' + 123 | S; \ + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:123:19: note: in expansion of macro 'NcbiEmptyString' + 123 | #define kEmptyStr NcbiEmptyString + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr' + 62 | BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout), + | ^~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 69 | CSeqFormatterConfig config; + | ^~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 71 | BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config), + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:123:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL' + 123 | S; \ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 78 | CSeqFormatterConfig config; + | ^~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 94 | CSeqFormatter f(*itr, db, std::cout, config); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 98 | CSeqFormatter f("%m", db, std::cout, config); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 109 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 151 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 195 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 228 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 259 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 284 | CSeqFormatter f(format_spec, db, out); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 314 | CSeqFormatterConfig config; + | ^~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 319 | CSeqFormatter f(format_spec, db, out, config); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] + 358 | CSeqFormatterConfig config; + | ^~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here + 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations] + 361 | CSeqFormatter f(format_spec, db, out, config); + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here + 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter + | ^~~~~~~~~~~~~ +d/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc 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/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC 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/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o makembindex +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/makembindex +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall 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+-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/version.cpp -o version.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:32: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] + 125 | reader.Read(false, true); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:42: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/aln_reader.hpp:215:10: note: declared here + 215 | void Read( + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] + 376 | while (k < m_Msa->dimensions->query_length && + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/query_data.cpp -o query_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protecIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/winmask_filter.cpp:61: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29940,9 +30325,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29958,9 +30343,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29976,9 +30361,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -29994,9 +30379,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30006,14 +30391,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:2104:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 2104 | } catch (CException e){ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:54: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -30104,15 +30483,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:63: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:54: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30128,212 +30504,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:4446:49: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 4446 | for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/showalign.cpp:4446:81: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'unsigned int'} [-Wsign-compare] - 4446 | for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ - | ~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 100 | return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 106 | m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ -tools/edit/feature_propagate.cpp -o feature_propagate.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o -/bin/rm -f libxobjedit.so .libxobjedit.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lmlacli -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxobjedit.so -/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjedit.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -cd objtools/cleanup/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/main.cpp -o main.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o dustmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f dustmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/dustmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:52: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:52: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -no-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:369:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] - 369 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:375:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 375 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:381:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] - 381 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:387:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'unsigned int'} [-Wsign-compare] - 387 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2889:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 2889 | if (abs((long int)this_start - (long int)prev_end) < min_len) { - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::DecodeXMLMarkChanged(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:4168:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 4168 | idx < sizeof(transformations)/sizeof(transformations[0]); - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::ParseCodeBreak(const ncbi::objects::CSeq_feat&, ncbi::objects::CCdregion&, const ncbi::CTempString&, ncbi::objects::CScope&, ncbi::objects::IObjtoolsListener*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:4512:77: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations] - 4512 | string pos = NStr::TruncateSpaces(str.substr(loc_pos, end_pos - loc_pos)); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:33: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:2269:24: note: declared here - 2269 | static CTempString TruncateSpaces(const CTempString str, - | ^~~~~~~~~~~~~~ -pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_Fmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/main.cpp -o main.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o windowmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/windowmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::CapitalizeAfterApostrophe(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:912:25: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 912 | if (rslt[0] != start) - | ~~~~~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::FixAffiliationShortWordsInElement(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:951:29: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 951 | if (rslt[0] != start) - | ~~~~~~~~^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::FixOrdinalNumbers(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:978:29: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 978 | if (rslt[0] != start) - | ~~~~~~~~^~~~~~~~ -ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/buil/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::string&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:5850:22: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 5850 | for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) { - | ~~~~~~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:5864:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] - 5864 | if( first_pos > last_pos ) { - | ~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:7113:10: warning: unused variable 'changed' [-Wunused-variable] - 7113 | bool changed = false; - | ^~~~~~~ -d/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack+14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o -/bin/rm -f libalign_format.so .libalign_format.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libalign_format.so -/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.align_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -cd objtools/align_format/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOU-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/version.cpp -o version.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: +tor-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -DIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -30424,14 +30602,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30447,9 +30623,43 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, ++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o +/bin/rm -f libalign_format.so .libalign_format.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libalign_format.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libalign_format.so +/bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.align_format.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/align_format/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOU_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o +/bin/rm -f libxblast.so .libxblast.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -30541,13 +30751,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30565,16 +30775,16 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30590,9 +30800,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30608,9 +30818,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30626,9 +30836,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30644,9 +30854,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30657,19 +30867,19 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -30681,7 +30891,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -30773,13 +30983,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30803,6 +31013,27 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30821,6 +31052,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30839,6 +31088,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30857,6 +31124,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30875,6 +31160,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -30890,6 +31193,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, @@ -30898,6 +31206,24 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, @@ -31059,19 +31385,35 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ReadAsciiMsa(ncbi::CNcbiIstream&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:125:32: warning: 'void ncbi::CAlnReader::Read(bool, bool, ncbi::objects::ILineErrorListener*)' is deprecated [-Wdeprecated-declarations] - 125 | reader.Read(false, true); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:42: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/aln_reader.hpp:215:10: note: declared here - 215 | void Read( - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare] - 376 | while (k < m_Msa->dimensions->query_length && - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +tools/edit/feature_propagate.cpp -o feature_propagate.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/text_object_description.cpp -o text_object_description.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/edit/seq_edit.cpp -o seq_edit.o +/bin/rm -f libxobjedit.so .libxobjedit.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxobjedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjutil -ltaxon3 -lvalid -lmlacli -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxobjedit.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxobjedit.so +/bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xobjedit.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' +cd objtools/cleanup/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup TMPL=cleanup -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/gene_qual_normalization.cpp -o gene_qual_normalization.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp -o cleanup_user_object.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -31087,12 +31429,6 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -31115,197 +31451,61 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproduciIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:60: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:48: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ +astn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxblast.so +/bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xblast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' /usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' 17 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -ble-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/query_data.cpp -o query_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fRCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o align_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/align_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -debug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protecIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_version.hpp:33, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker_istat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/winmask/seq_masker.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/winmask_filter.cpp:61: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' +cd algo/blast/blastinput/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/proteinkmer/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o +/usr/bin/g++ -std=gnu++14 -c -Wamake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfilell -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-proteIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -31396,12 +31596,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -31417,14 +31617,17 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -tor-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -DIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:84: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] + 84 | #pragma ivdep + | +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:91: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] + 91 | #pragma ivdep + | +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:98: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] + 98 | #pragma ivdep + | +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -31515,12 +31718,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -31536,113 +31739,281 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o writedb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/writedb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -bi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_author.cpp -o cleanup_author.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_pub.cpp -o cleanup_pub.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o -/bin/rm -f libxcleanup.so .libxcleanup.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcleanup.so -/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcleanup.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -cd objtools/format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format TMPL=xformat -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp -o comment_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-str/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp: In function 'void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::string&, const ncbi::objects::CUser_object&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp:374:16: warning: unused variable 'is_html' [-Wunused-variable] - 374 | const bool is_html = ctx.Config().DoHTML(); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp: In member function 'void ncbi::objects::CFeatureItem::x_AddQualExceptions(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp:1412:28: warning: unused variable 'cfg' [-Wunused-variable] - 1412 | const CFlatFileConfig& cfg = ctx.Config(); - | ^~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp:2108:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] - 2108 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ -_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o -/bin/rm -f libxblast.so .libxblast.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducibleastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxblast.so -/bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xblast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -cd algo/blast/blastinput/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd algo/blast/proteinkmer/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:447: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] + 447 | #pragma ivdep + | +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:51: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:48: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:48: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::CapitalizeAfterApostrophe(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:912:25: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 912 | if (rslt[0] != start) + | ~~~~~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::FixAffiliationShortWordsInElement(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:951:29: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 951 | if (rslt[0] != start) + | ~~~~~~~~^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp: In function 'void ncbi::objects::FixOrdinalNumbers(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp:978:29: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 978 | if (rslt[0] != start) + | ~~~~~~~~^~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:60: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 77 | if (hits.size() < numHashes) + | ~~~~~~~~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:807:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 807 | if (last_oid == *i) + | ~~~~~~~~~^~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp: In constructor 'ncbi::blast::CIgBlastpAppArgs::CIgBlastpAppArgs()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp:67:16: warning: unused variable 'kFilterByDefault' [-Wunused-variable] + 67 | const bool kFilterByDefault = false; + | ^~~~~~~~~~~~~~~~ +ctor-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp: In member function 'virtual void ncbi::blast::CMapperMTArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:205:60: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] + 205 | const int kMaxValue = static_cast(GetCpuCount()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbifile.hpp:53, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_aux.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_results.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/blastinput/blast_args.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/blastinput/magicblast_args.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here + 479 | unsigned int GetCpuCount(void) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp: In static member function 'static bool ncbi::objects::CCleanup::s_AddNumToUserField(ncbi::objects::CUser_field&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:369:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] + 369 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetStrs().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:375:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 375 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetInts().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:381:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] + 381 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetReals().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_user_object.cpp:387:53: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CUser_field_Base::TNum' {aka 'int'} and 'std::vector*>::size_type' {aka 'unsigned int'} [-Wsign-compare] + 387 | if (!field.IsSetNum() || field.GetNum() != field.GetData().GetOss().size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o +/bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libproteinkmer.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libproteinkmer.so +/bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfilemake[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o -/usr/bin/g++ -std=gnu++14 -c -WaIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +cd algo/blast/igblast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:5850:22: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 5850 | for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) { + | ~~~~~~~~~~^~~~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:5864:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 5864 | if( first_pos > last_pos ) { + | ~~~~~~~~~~^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j15 --jobserver-auth=7,8 all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp:7113:10: warning: unused variable 'changed' [-Wunused-variable] + 7113 | bool changed = false; + | ^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -31661,8 +32032,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ @@ -31676,86 +32050,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -31783,7 +32086,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' +/build/reproducible-path/ncbi-blast+-2.11.0+dIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +s/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' @@ -31813,6 +32122,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -31825,6 +32137,28 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -31844,15 +32178,7 @@ 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDIN/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -31862,138 +32188,7 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:84: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] - 84 | #pragma ivdep - | -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:91: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] - 91 | #pragma ivdep - | -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:98: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] - 98 | #pragma ivdep - | -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:447: warning: ignoring '#pragma ivdep ' [-Wunknown-pragmas] - 447 | #pragma ivdep - | -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp: In member function 'virtual void ncbi::objects::CKeywordsItem::x_GatherInfo(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp:324:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 324 | } catch (CException) { - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 77 | if (hits.size() < numHashes) - | ~~~~~~~~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp:220:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] - 220 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp:221:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 221 | if (this_start < (15 + last_stop) ) { - | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:807:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 807 | if (last_oid == *i) - | ~~~~~~~~~^~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp: In member function 'virtual void ncbi::objects::CReferenceItem::x_GatherInfo(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp:693:41: warning: unused variable 'muid' [-Wunused-variable] - 693 | const TEntrezId muid = pub.GetMuid(); - | ^~~~ --path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp -o source_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/version_item.cpp -o version_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_GatherInfoIdx(ncbi::objects::CBioseqContext&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp:182:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] - 182 | for (int i = 0; i < sizeof (legal_organelles) / sizeof (const char*); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp:387:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] - 387 | if ( genome >= s_organelle_prefix_size ) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prote.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o -/bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libproteinkmer.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libproteinkmer.so -/bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.proteinkmer.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -cd algo/blast/igblast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast TMPL=igblast -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -32008,6 +32203,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32065,7 +32265,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +FO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:3/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -32075,17 +32287,7 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_4: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32096,14 +32298,22 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAUIMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +LT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32131,37 +32341,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+d/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -32173,36 +32353,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + | ^~~~~~~~~~~~~~~~~~~~~~~ +s/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = N/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' @@ -32212,17 +32376,8 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_CBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32235,12 +32390,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32253,6 +32408,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -32333,9 +32493,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32351,12 +32516,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32369,12 +32534,13 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ + ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32449,95 +32615,42 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ --security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/context.cpp -o context.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_items.cpp -o gather_items.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp:1108:10: warning: unused variable 'bHtml' [-Wunused-variable] - 1108 | bool bHtml = ctx.Config().DoHTML(); - | ^~~~~ -ctor-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp: In member function 'void ncbi::blast::CIgBlast::x_FindDJAln(ncbi::CRef&, ncbi::CRef&, std::string, bool, ncbi::objects::ENa_strand, int, int, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp:994:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 994 | if ((*it)->GetSeqStart(1) > max_allowed_j_deletion) keep = false; - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blastdiag_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdiag_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32614,8 +32727,17 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME _In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c_DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ @@ -32625,17 +32747,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro '++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32651,107 +32777,17 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:72: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp: In constructor 'ncbi::blast::CIgBlastpAppArgs::CIgBlastpAppArgs()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp:67:16: warning: unused variable 'kFilterByDefault' [-Wunused-variable] - 67 | const bool kFilterByDefault = false; - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_items.cpp:965:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function] - 965 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) - | ^~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp: In member function 'virtual void ncbi::blast::CMapperMTArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:205:60: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] - 205 | const int kMaxValue = static_cast(GetCpuCount()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbifile.hpp:53, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_aux.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_results.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/blastinput/blast_args.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/blastinput/magicblast_args.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here - 479 | unsigned int GetCpuCount(void) - | ^~~~~~~~~~~ -format/genbank_gather.cpp -o genbank_gather.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werrmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/aalookup_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp: In member function 'virtual void ncbi::objects::CGenbankFormatter::FormatSequence(const ncbi::objects::CSequenceItem&, ncbi::objects::IFlatTextOStream&)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:2047:18: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=] - 2047 | } catch (CSeqVectorException) { - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:2088:26: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=] - 2088 | } catch (CSeqVectorException) { - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ +NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32764,9 +32800,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32840,13 +32876,49 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_D/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32862,27 +32934,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/aascan_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +EFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -32974,13 +33030,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -32996,72 +33052,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp: At global scope: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:281:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const string&, ncbi::TGi)' defined but not used [-Wunused-function] - 281 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) - | ^~~~~~~~~~~~~~~~~ -or=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ - -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o -/bin/rm -f libblastinput.so .libblastinput.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblastinput.so -/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blastinput.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -33153,13 +33146,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -33175,29 +33168,222 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o -/bin/rm -f libigblast.so .libigblast.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libigblast.so -/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.igblast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:2889:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] + 2889 | if (abs((long int)this_start - (long int)prev_end) < min_len) { + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::DecodeXMLMarkChanged(std::string&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:4168:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 4168 | idx < sizeof(transformations)/sizeof(transformations[0]); + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::ParseCodeBreak(const ncbi::objects::CSeq_feat&, ncbi::objects::CCdregion&, const ncbi::CTempString&, ncbi::objects::CScope&, ncbi::objects::IObjtoolsListener*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:4512:77: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations] + 4512 | string pos = NStr::TruncateSpaces(str.substr(loc_pos, end_pos - loc_pos)); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup.cpp:33: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:2269:24: note: declared here + 2269 | static CTempString TruncateSpaces(const CTempString str, + | ^~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp: In member function 'void ncbi::blast::CIgBlast::x_FindDJAln(ncbi::CRef&, ncbi::CRef&, std::string, bool, ncbi::objects::ENa_strand, int, int, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp:994:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 994 | if ((*it)->GetSeqStart(1) > max_allowed_j_deletion) keep = false; + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:72: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blastdiag_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdiag_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 73 | BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */ + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:167:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL' + 167 | S; \ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/bl2seq.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -33289,13 +33475,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -33311,52 +33497,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 73 | BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */ - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:167:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL' - 167 | S; \ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/bl2seq.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()': /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] 1329 | opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ @@ -33462,27 +33602,40 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastengine_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null + -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o +/bin/rm -f libblastinput.so .libblastinput.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lsubmit -lxlogging -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libblastinput.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libblastinput.so +/bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.blastinput.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -33574,13 +33727,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -33596,34 +33749,26 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gap_item.cpp -o gap_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compilmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastextend_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +RCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o align_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/align_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -33715,13 +33860,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -33749,28 +33894,16 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/proteinkmer_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -llmdb -lpthread -ldl -lm -lpthread -o gapinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -33783,147 +33916,25 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -llmdb -lpthread -ldl -lm -lpthread -o gapinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gapinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -34015,13 +34026,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -34053,174 +34064,24 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blasthits_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o gencode_singleton_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gencode_singleton_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37: @@ -34338,23 +34199,23 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspfilter_besthit_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34: @@ -34487,59 +34348,42 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o -/bin/rm -f libxformat.so .libxformat.so.stamp -/usr/bin/g++ -std=gnu++14 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -/bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxformat.so -/bin/ln -f .xformat.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xformat.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspfilter_besthit_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastextend_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:37: @@ -34651,29 +34495,11 @@ 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastoptions_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34: @@ -34790,24 +34616,56 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspfilter_culling_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o gencode_singleton_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34: @@ -34924,56 +34782,44 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -ldl -lm -lpthread -o seqdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o +/bin/rm -f libigblast.so .libigblast.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libigblast.so +/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.igblast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspfilter_culling_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34: @@ -35090,41 +34936,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:37: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspstream_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspstream_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34: @@ -35241,6 +35052,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -llmdb -lpthread -ldl -ldl -lm -lpthread -o seqdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -35253,44 +35082,10 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/linkhsp_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34: @@ -35408,23 +35203,41 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o msa2pssm_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/msa2pssm_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blasthits_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34: @@ -35541,24 +35354,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastfilter_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34: @@ -35687,7 +35482,7 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:37: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -35703,7 +35498,55 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -35723,27 +35566,44 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastsetup_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o hspstream_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/hspstream_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -35816,12 +35676,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -35840,6 +35694,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35852,17 +35714,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35875,15 +35735,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35896,9 +35753,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35935,12 +35795,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35956,6 +35810,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35968,20 +35830,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -35994,9 +35851,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -36067,13 +35927,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -36090,71 +35950,45 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o psiblast_iteration_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o msa2pssm_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/msa2pssm_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/proteinkmer_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34: @@ -36271,24 +36105,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o phiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/phiblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j15 --jobserver-auth=7,8 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j15 --jobserver-auth=7,8 all In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34: @@ -36405,24 +36234,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/ntlookup_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34: @@ -36539,24 +36351,72 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/prelimsearch_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o psiblast_iteration_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35: @@ -36689,6 +36549,24 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/linkhsp_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -36721,24 +36599,6 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psibl2seq_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp:34: @@ -36856,23 +36716,41 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/ntscan_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastsetup_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o phiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp:34: @@ -36989,72 +36867,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34: @@ -37171,24 +36983,56 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rmblast_blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34: @@ -37306,23 +37150,23 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o optionshandle_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/optionshandle_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34: @@ -37439,6 +37283,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psibl2seq_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -37455,24 +37305,34 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/queryinfo_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j15 --jobserver-auth=7,8 all +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35: @@ -37589,27 +37449,75 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rmblast_traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -37701,13 +37609,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -37725,7 +37633,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -37817,13 +37725,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -37841,7 +37749,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -37933,13 +37841,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -37955,122 +37863,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/pssmcreate_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rmblast_blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j8 --jobserver-auth=7,8 all -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34: @@ -38188,23 +37998,103 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/querydata_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/ntscan_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34: @@ -38321,56 +38211,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqinfosrc_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp:34: @@ -38488,23 +38330,23 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rps_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastfilter_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:39: @@ -38637,24 +38479,75 @@ /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/scoreblk_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rmblast_traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test +/bin/bash /build/reprodmake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +ucible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/pssmcreate_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34: @@ -38771,47 +38664,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/setupfactory_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o stat_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/stat_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34: @@ -39044,38 +38899,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -ubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqsrc_unit_test +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o optionshandle_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:39: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34: @@ -39192,40 +39033,48 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/remote_blast_unit_test +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seqinfosrc_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o stat_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/stat_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/segmasker/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rps_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -w -j15 --jobserver-auth=7,8 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -39238,12 +39087,13 @@ from /usr/include/boost/test/test_tools.hpp:46, from /usr/include/boost/test/unit_test.hpp:18, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:39: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -39334,12 +39184,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39355,58 +39205,8 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/search_strategy_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/segmasker/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker TMPL=segmasker -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -39497,12 +39297,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39519,23 +39319,325 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/scoreblk_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/setupfactory_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] + 94 | objects::CFastaReader::fAllSeqIds | + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here + 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) + | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/subj_ranges_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs 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-pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE 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-I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/capitalization_string.cpp -o capitalization_string.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/fix_feature_id.cpp -o fix_feature_id.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o +/bin/rm -f libxcleanup.so .libxcleanup.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanupubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio 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-fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o version_reference_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/version_reference_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxobjutil -lvalid -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxcleanup.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxcleanup.so +/bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xcleanup.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' +cd objtools/format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format TMPL=xformat -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp -o comment_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/contig_item.cpp -o contig_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/date_item.cpp -o date_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/defline_item.cpp -o defline_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp -o feature_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genome_item.cpp -o genome_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/locus_item.cpp -o locus_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproduciblemake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o segmasker +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/segmasker +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/search_strategy_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tracebacksearch_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -llmdb -lpthread -ldl -lm -lpthread -o convert2blastmask +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/convert2blastmask +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp:220:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] + 220 | if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp:221:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 221 | if (this_start < (15 + last_stop) ) { + | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp: In member function 'virtual void ncbi::objects::CKeywordsItem::x_GatherInfo(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/keywords_item.cpp:324:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 324 | } catch (CException) { + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp: In member function 'virtual void ncbi::objects::CReferenceItem::x_GatherInfo(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp:693:41: warning: unused variable 'muid' [-Wunused-variable] + 693 | const TEntrezId muid = pub.GetMuid(); + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp: In function 'void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::string&, const ncbi::objects::CUser_object&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/comment_item.cpp:374:16: warning: unused variable 'is_html' [-Wunused-variable] + 374 | const bool is_html = ctx.Config().DoHTML(); + | ^~~~~~~ +-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/primary_item.cpp -o primary_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/reference_item.cpp -o reference_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/segment_item.cpp -o segment_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp -o source_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/version_item.cpp -o version_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp: In member function 'void ncbi::objects::CFeatureItem::x_AddQualExceptions(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp:1412:28: warning: unused variable 'cfg' [-Wunused-variable] + 1412 | const CFlatFileConfig& cfg = ctx.Config(); + | ^~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/feature_item.cpp:2108:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare] + 2108 | if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/remote_blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/uniform_search_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/traceback_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/context.cpp -o context.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_items.cpp -o gather_items.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools//build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_GatherInfoIdx(ncbi::objects::CBioseqContext&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp:182:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] + 182 | for (int i = 0; i < sizeof (legal_organelles) / sizeof (const char*); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/source_item.cpp:387:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'const unsigned int' [-Wsign-compare] + 387 | if ( genome >= s_organelle_prefix_size ) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/split_query_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/qualifiers.cpp:1108:10: warning: unused variable 'bHtml' [-Wunused-variable] + 1108 | bool bHtml = ctx.Config().DoHTML(); + | ^~~~~ +format/genbank_gather.cpp -o genbank_gather.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++//build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_items.cpp:965:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function] + 965 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp: In member function 'virtual void ncbi::objects::CGenbankFormatter::FormatSequence(const ncbi::objects::CSequenceItem&, ncbi::objects::IFlatTextOStream&)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:2047:18: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=] + 2047 | } catch (CSeqVectorException) { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:2088:26: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=] + 2088 | } catch (CSeqVectorException) { + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp: At global scope: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genbank_formatter.cpp:281:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const string&, ncbi::TGi)' defined but not used [-Wunused-function] + 281 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) + | ^~~~~~~~~~~~~~~~~ +include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gap_item.cpp -o gap_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o +/bin/rm -f libxformat.so .libxformat.so.stamp +/usr/bin/g++ -std=gnu++14 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib +/bin/ln -f libxformat.so /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib/libxformat.so +/bin/ln -f .xformat.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xformat.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' +cd algo/blast/format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format TMPL=xblastformat -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o @@ -39547,7 +39649,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -39641,7 +39743,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -39649,7 +39751,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39667,7 +39769,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -39675,7 +39777,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39695,8 +39797,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -39790,8 +39891,7 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -39799,8 +39899,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39818,8 +39917,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -39827,8 +39925,7 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39848,7 +39945,8 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -39942,7 +40040,8 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -39950,7 +40049,8 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -39966,32 +40066,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml2_format.cpp:46: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, @@ -40120,6 +40194,34 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp:37: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); @@ -40145,143 +40247,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:94:32: warning: 'ncbi::objects::CFastaReader::fAllSeqIds' is deprecated: This flag is no longer used in CFastaReader. [-Wdeprecated-declarations] - 94 | objects::CFastaReader::fAllSeqIds | - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp:44: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/readers/fasta.hpp:92:9: note: declared here - 92 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) - | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o version_reference_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f version_reference_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/version_reference_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] - 501 | auto_ptr xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false)); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/object_manager.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here - 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbimisc.hpp:1143:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' - 1143 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED - | ^~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::string&, std::string&, bool, bool)': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] - 785 | auto_ptr xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false)); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbicntr.hpp:40, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiobj.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/object_manager.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here - 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbimisc.hpp:1143:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' - 1143 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED - | ^~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/split_query_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/segmasker/segmasker.cpp -o segmasker.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie segmasker.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o segmasker -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f segmasker /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/segmasker -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f tracebacksearch_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tracebacksearch_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:51: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] - 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here - 178 | NCBI_DEPRECATED char* GetFilterString() const; - | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -llmdb -lpthread -ldl -lm -lpthread -o convert2blastmask -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f convert2blastmask /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/convert2blastmask -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, @@ -40440,6 +40405,94 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xmlformat.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/data4xml2format.cpp:36: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] + 501 | auto_ptr xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false)); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/object_manager.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here + 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbimisc.hpp:1143:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' + 1143 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::string&, std::string&, bool, bool)': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations] + 785 | auto_ptr xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false)); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbicntr.hpp:40, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiobj.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objmgr/object_manager.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blastxml_format.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/serial/objostrxml.hpp:66:26: note: declared here + 66 | NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbimisc.hpp:1143:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' + 1143 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED + | ^~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] + 122 | if (m_ResultsMap.size() != currNum) + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 155 | m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:51: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] + 140 | m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/uniform_search.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:37: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here + 178 | NCBI_DEPRECATED char* GetFilterString() const; + | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/jsonwrapp11.hpp:75, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/jsonwrapp.hpp:29, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:53: @@ -40462,13 +40515,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/rapidjson11/document.h:88:8: note: 'struct rapidjson::GenericMember, rapidjson::MemoryPoolAllocator<> >' declared here 88 | struct GenericMember { | ^~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/uniform_search_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/jsonwrapp11.hpp:75, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/jsonwrapp.hpp:29, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_format.cpp:53: @@ -40506,17 +40552,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/misc/jsonwrapp/rapidjson11/document.h:564:7: note: 'class rapidjson::GenericValue >' declared here 564 | class GenericValue { | ^~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/traceback_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] - 122 | if (m_ResultsMap.size() != currNum) - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/format/sam.cpp -o sam.o @@ -40528,96 +40563,213 @@ /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blast_report LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j8 --jobserver-auth=7,8 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j15 --jobserver-auth=7,8 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_report -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastx -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastp -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastn -w -j15 --jobserver-auth=7,8 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=deltablast -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBIn file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) @@ -40732,47 +40884,7 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +UILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ @@ -40826,13 +40938,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -40850,7 +40962,34 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:1In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -40868,14 +41007,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + | version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' @@ -40884,16 +41016,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | 24:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' @@ -40902,74 +41027,60 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NC++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = NCBIBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -40979,15 +41090,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of +-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& buil_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -40997,14 +41111,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of mamacro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | d_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ @@ -41015,9 +41133,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in ex ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | cro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -41026,7 +41155,18 @@ | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ + | pansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ @@ -41037,6 +41177,37 @@ 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -41047,7 +41218,7 @@ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41058,7 +41229,29 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: + ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ @@ -41067,7 +41260,24 @@ from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ + | from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __ ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) | ^~~~~~~~~~~~~~~ @@ -41078,16 +41288,18 @@ 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + 94 | CNcb ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) @@ -41098,6 +41310,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ + CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +BI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -41173,14 +41400,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -41197,8 +41422,7 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -41289,14 +41513,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -41313,17 +41535,16 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41339,9 +41560,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41357,9 +41578,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41375,9 +41596,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41393,9 +41614,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41405,20 +41626,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41429,17 +41648,16 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41455,9 +41673,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41473,9 +41691,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41491,9 +41709,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41509,9 +41727,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41521,20 +41739,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41545,16 +41761,7 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -41645,14 +41852,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -41668,13 +41873,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ - ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41690,9 +41900,39 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41708,15 +41948,25 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 170 | CVersion(const SBuildInfo& build_info = 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -41726,9 +41976,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41736,7 +41986,18 @@ 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + 177 | NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) @@ -41744,9 +42005,31 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41756,26 +42039,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -41785,37 +42062,51 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: + const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -41906,14 +42197,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -41931,7 +42220,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -42023,13 +42312,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -42047,8 +42336,7 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -42140,15 +42428,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -42164,158 +42450,57 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignmeIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -nt_unit_test.cpp:34: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' + 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -42407,13 +42592,13 @@ 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -42429,162 +42614,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:61: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' - 17 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/test/tools/assertion_result.hpp:21, - from /usr/include/boost/test/tools/old/impl.hpp:20, - from /usr/include/boost/test/test_tools.hpp:46, - from /usr/include/boost/test/unit_test.hpp:18, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: -/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' - 14 | BOOST_HEADER_DEPRECATED( "" ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/magicblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_formatter -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/redoalignment_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42600,12 +42641,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -O_DEFAULT_INSTANCE() \ + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() @@ -42619,9 +42659,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42637,9 +42677,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42655,9 +42695,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42667,19 +42707,20 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blast_report LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42689,51 +42730,21 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blast_report -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42749,9 +42760,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42767,9 +42778,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42785,9 +42796,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42803,9 +42814,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42815,18 +42826,26 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -42839,12 +42858,40 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:41: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:54: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' + 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' + 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -42860,26 +42907,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/delta_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastn -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -42970,12 +43000,14 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -42991,65 +43023,19 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I../ -DNCBI_APP_BUILT_AS=bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/bdbloader_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastp -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43065,9 +43051,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43083,9 +43069,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43101,9 +43087,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43119,9 +43105,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43131,18 +43117,22 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:45, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: note: in definition of macro 'NCBI_BUILD_TIME' + 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -43152,33 +43142,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=blastx -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:41: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:41: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43194,104 +43166,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:45: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43304,25 +43187,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -g/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o blast_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=deltablast -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, @@ -43347,8 +43214,217 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:53: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:47: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -llmdb -lpthread -ldl -lm -lpthread -o blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:51: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=psiblast -w -j15 --jobserver-auth=7,8 all +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:55: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -43439,12 +43515,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43463,12 +43539,12 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:45: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:45: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp:36: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43484,26 +43560,81 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp -o blast_report.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blast_report -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_report -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:51: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:64: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/test/tools/assertion_result.hpp:21, + from /usr/include/boost/test/tools/old/impl.hpp:20, + from /usr/include/boost/test/test_tools.hpp:46, + from /usr/include/boost/test/unit_test.hpp:18, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/test_boost.hpp:68, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:61: +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I../ -DNCBI_APP_BUILT_AS=bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/bdbloader_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=psiblast -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=rpsblast -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -43522,6 +43653,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -43555,113 +43691,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:45: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastn -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=rpsblast -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43674,12 +43706,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43710,12 +43745,9 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43728,12 +43760,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43749,12 +43784,6 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43767,32 +43796,16 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ + | ^ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43805,12 +43818,11 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:158:58: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 158 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43823,12 +43835,15 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:170:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 170 | CVersion(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:69: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43841,12 +43856,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:177:45: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 177 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:85: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43859,15 +43880,18 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:41: +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -43880,29 +43904,29 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blast_formatter -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_formatter -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' + 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/magicblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=rpstblastn -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -43993,12 +44017,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -44015,7 +44039,7 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 142 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^ @@ -44106,12 +44130,12 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:195:61: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 195 | const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()) | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: +In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:77: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_app.cpp:35: + from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ | ^~~~~~~~ @@ -44130,54 +44154,6 @@ In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:41: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp:35: -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:52:26: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 52 | # define NCBI_BUILD_TIME __DATE__ " " __TIME__ - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:124:55: note: in expansion of macro 'NCBI_BUILD_TIME' - 124 | #define NCBI_SBUILDINFO_DEFAULT_INSTANCE() SBuildInfo(NCBI_BUILD_TIME, NCBI_BUILD_TAG_PROXY) - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:104:5: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_INSTANCE' - 104 | NCBI_SBUILDINFO_DEFAULT_INSTANCE() \ - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:117:35: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT_IMPL' - 117 | #define NCBI_SBUILDINFO_DEFAULT() NCBI_SBUILDINFO_DEFAULT_IMPL() - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' - 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgictx.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/objtools/align_format/showdefline.hpp:41, - from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/algo/blast/format/blast_format.hpp:49, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpstblastn_node.cpp:41: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); @@ -44223,24 +44199,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastp -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastp -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/delta_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=seedtop -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=seedtop -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/seedtop_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -44378,24 +44354,30 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/cgi/cgiapp.hpp:68:52: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/auto_unit_test.hpp:17:1: note: '#pragma message: This header is deprecated. Use instead.' + 17 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' + 14 | BOOST_HEADER_DEPRECATED( "" ) + | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp -o blastx_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastx -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastx +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o psiblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=tblastn -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=tblastn -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastn_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -44534,23 +44516,23 @@ 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o deltablast -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/deltablast +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=tblastx -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast TMPL=tblastx -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastx_app.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -44689,23 +44671,23 @@ 68 | CCgiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o seedtop -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seedtop +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastx_app.cpp -o blastx_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastx +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -44820,23 +44802,24 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o psiblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o rpsblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_convert.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -44951,24 +44934,23 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o rpsblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rpsblast +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o seedtop +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdb_path -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_path.cpp:35: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45090,17 +45072,17 @@ /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcheck.cpp:34: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45214,24 +45196,28 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o tblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tblastn -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -ldl -lm -lpthread -o blast_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45345,24 +45331,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/bl2seq_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_report.cpp -o blast_report.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blast_report +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blast_report /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_report +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=blastdbcp -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcp.cpp:31: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45477,23 +45463,23 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o tblastx -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tblastx +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastp +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. +make[4]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=makeblastdb -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/makeblastdb.cpp:38: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45607,6 +45593,24 @@ /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:94:53: note: in expansion of macro 'NCBI_SBUILDINFO_DEFAULT' 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/redoalignment_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blastdb/ && /usr/bin/make -w -j15 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j15 --jobserver-auth=7,8 all +make[5]: warning: -j15 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_path /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_path.cpp -o blastdb_path.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdb_path.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdb_path @@ -45614,17 +45618,6 @@ /bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdb_path make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -w -j8 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -w -j8 --jobserver-auth=7,8 all -make[5]: warning: -j8 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/ncbiapp.hpp:43, from /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:36: /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include/corelib/version.hpp:142:82: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -45739,19 +45732,54 @@ 94 | CNcbiApplication(const SBuildInfo& build_info = NCBI_SBUILDINFO_DEFAULT()); | ^~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdb_convert -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdb_convert -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdb_aliastool /bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdb_aliastool make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o tblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o tblastx +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/tblastx +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blast_formatter +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blast_formatter +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/psiblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdb_convert.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdb_convert +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdb_convert +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o deltablast +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/deltablast +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcheck /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdbcheck @@ -45766,21 +45794,6 @@ /bin/ln -f blastdbcp /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdbcp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastinput_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o -/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdbcmd -/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin -/bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdbcmd -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeprofiledb /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o makeprofiledb @@ -45789,6 +45802,13 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o blastdbcmd +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastdbcmd +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o /usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeblastdb /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o /usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lz -lbz2 -ldl -lmbedtls -lmbedx509 -lmbedcrypto -lz -ldl -lm -lpthread -o makeblastdb @@ -45796,6 +45816,21 @@ /bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/makeblastdb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/blastinput_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/reproducible-path/ncbi-blast+-2.11.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o +/usr/bin/g++ -std=gnu++14 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin +/bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/bin/bl2seq_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[3]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' make[1]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds' @@ -45807,95 +45842,95 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds' dh_auto_test - cd c\+\+ && /usr/bin/make -j8 check VERBOSE=1 + cd c\+\+ && /usr/bin/make -j15 check VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build && /usr/bin/make -w -j8 --jobserver-auth=3,4 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build && /usr/bin/make -w -j15 --jobserver-auth=3,4 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build && /usr/bin/make -w -j8 --jobserver-auth=3,4 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build && /usr/bin/make -w -j15 --jobserver-auth=3,4 check_r RUN_CHECK=Y; \ fi make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[3]: warning: -j8 forced in submake: resetting jobserver mode. +make[3]: warning: -j15 forced in submake: resetting jobserver mode. ====================================================================== make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[4]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +make[4]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C corelib -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -C util -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C util -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C regexp -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/regexp TMPL=regexp -w -j8 --jobserver-auth=13,14 mark-as-disabled -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/regexp TMPL=regexp -w -j15 --jobserver-auth=13,14 mark-as-disabled +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -C xregexp -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C xregexp -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -C compress -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C compress -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C bzip2 -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: LocalBZ2 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j8 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j15 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -C zlib -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C zlib -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: LocalZ make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/zlib TMPL=zlib -w -j8 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/util/compress/zlib TMPL=zlib -w -j15 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -C api -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C api -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress/api' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/compress' @@ -45903,20 +45938,20 @@ Warning: non-existent sub-project "diff" /bin/echo 'Warning: non-existent sub-project "image"' Warning: non-existent sub-project "image" -/usr/bin/make -C tables -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C tables -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make -C sequtil -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C sequtil -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make -C bitset -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C bitset -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' @@ -45924,31 +45959,31 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "qparse"' Warning: non-existent sub-project "qparse" -/usr/bin/make -C lmdb -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C lmdb -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project lmdb due to unmet requirements: LocalLMDB make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/status/LocalLMDB.enabled', needed by 'requirements'. Stop. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' NOTE: skipping project "lmdb" due to unmet requirements make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdb' -/usr/bin/make -C lmdbxx -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdbxx' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util/lmdbxx' @@ -45957,12 +45992,12 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/util' -/usr/bin/make -C connect -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C connect -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C services -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect/services' @@ -45973,67 +46008,67 @@ /bin/echo 'Warning: non-existent sub-project "daemons"' Warning: non-existent sub-project "daemons" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/connect' -/usr/bin/make -C cgi -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C cgi -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -C html -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C html -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/html' -/usr/bin/make -C build-system -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C build-system -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C helpers -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/helpers' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C msbuild -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: MSWin make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j8 --jobserver-auth=15,16 mark-as-disabled -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j15 --jobserver-auth=15,16 mark-as-disabled +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system/project_tree_builder' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/build-system' -/usr/bin/make -C serial -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C serial -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C datatool -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' TEST -- serial/datatool/datatool make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/datatool' @@ -46041,18 +46076,18 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "soap"' Warning: non-existent sub-project "soap" -/usr/bin/make -C grpc_integration -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial/grpc_integration' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/serial' -/usr/bin/make -C db -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C db -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C sqlite -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/db' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/db/sqlite' /bin/echo 'Warning: non-existent sub-project "bdb"' @@ -46060,356 +46095,356 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/db' /bin/echo 'Warning: non-existent sub-project "dbapi"' Warning: non-existent sub-project "dbapi" -/usr/bin/make -C objects -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objects -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C general -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -C biblio -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C biblio -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -C medline -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C medline -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -C pub -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pub -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -C seqcode -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqcode -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -C seq -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seq -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -C seqset -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqset -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -C submit -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C submit -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -C seqedit -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqedit -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -C seqsplit -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqsplit -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make -C id1 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C id1 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -C id2 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C id2 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -C entrez2 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C entrez2 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -C pubmed -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pubmed -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -C medlars -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C medlars -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/make -C mla -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mla -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -C proj -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C proj -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/proj' -/usr/bin/make -C scoremat -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C scoremat -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -C blast -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -C blastdb -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -C blastxml -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastxml -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -C blastxml2 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -C mmdb -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mmdb -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mmdb' -/usr/bin/make -C cn3d -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cn3d -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/cn3d' -/usr/bin/make -C cdd -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cdd -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/cdd' -/usr/bin/make -C ncbimime -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C ncbimime -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pcsubstance' -/usr/bin/make -C pcassay -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pcassay -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/pcassay' -/usr/bin/make -C gbseq -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C gbseq -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -C insdseq -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C insdseq -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/insdseq' -/usr/bin/make -C tinyseq -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C tinyseq -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/tinyseq' -/usr/bin/make -C biotree -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C biotree -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/biotree' -/usr/bin/make -C entrezgene -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C entrezgene -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/entrezgene' -/usr/bin/make -C omssa -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C omssa -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/omssa' -/usr/bin/make -C remap -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C remap -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/remap' -/usr/bin/make -C seqtest -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqtest -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/seqtest' -/usr/bin/make -C taxon1 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C taxon1 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -C taxon3 -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C taxon3 -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/make -C gbproj -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C gbproj -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/gbproj' -/usr/bin/make -C trackmgr -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C trackmgr -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/trackmgr' -/usr/bin/make -C valerr -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C valerr -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valerr' -/usr/bin/make -C valid -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C valid -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -C access -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C access -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/access' -/usr/bin/make -C docsum -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C docsum -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/docsum' -/usr/bin/make -C featdef -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C featdef -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/featdef' -/usr/bin/make -C genomecoll -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C genomecoll -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C gc_cli -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' SKIP -- objects/genomecoll/gc_cli/gc_cli (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -C homologene -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C homologene -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/homologene' -/usr/bin/make -C mim -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C mim -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/mim' -/usr/bin/make -C objprt -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C objprt -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/objprt' -/usr/bin/make -C variation -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C variation -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -C macro -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C macro -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/macro' -/usr/bin/make -C genesbyloc -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/genesbyloc' -/usr/bin/make -C coords -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C coords -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/coords' -/usr/bin/make -C varrep -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C varrep -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/varrep' -/usr/bin/make -C variation_libs -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C variation_libs -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C dbsnp -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C search_by_rsid -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/variation_libs' -/usr/bin/make -C dbsnp -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C dbsnp -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C primary_track -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/dbsnp' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/dbsnp/primary_track' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objects' -/usr/bin/make -C objmgr -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objmgr -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" -/usr/bin/make -C util -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C util -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make -C split -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C split -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -C objtools -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C objtools -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C logging -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C readers -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" /bin/echo 'Warning: non-existent sub-project "test"' @@ -46417,87 +46452,87 @@ /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -C blast -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C seqdb_reader -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C demo -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C demo -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C services -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' SKIP -- objtools/blast/services/unit_test/blast_services_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' @@ -46505,21 +46540,21 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "diag"' Warning: non-existent sub-project "diag" /bin/echo 'Warning: non-existent sub-project "cassandra"' Warning: non-existent sub-project "cassandra" -/usr/bin/make -C client -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C client -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' SKIP -- objtools/pubseq_gateway/client/test/test_psg_client_impl (unmet build REQUIRES) make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' @@ -46529,34 +46564,34 @@ /bin/echo 'Warning: non-existent sub-project "cache"' Warning: non-existent sub-project "cache" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C data_loaders -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C genbank -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C cache -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' /bin/echo 'Warning: non-existent sub-project "pubseq"' Warning: non-existent sub-project "pubseq" -/usr/bin/make -C id2 -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C id2 -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C id1 -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /bin/echo 'Warning: non-existent sub-project "pubseq2"' Warning: non-existent sub-project "pubseq2" -/usr/bin/make -C gicache -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C gicache -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/gicache' /bin/echo 'Warning: non-existent sub-project "test"' @@ -46564,9 +46599,9 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' @@ -46577,14 +46612,14 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/data_loaders' -/usr/bin/make -C simple -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C simple -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/make -C alnmgr -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C alnmgr -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' @@ -46596,21 +46631,21 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C edit -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C edit -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -C cleanup -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C cleanup -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -C format -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C format -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/format' /bin/echo 'Warning: non-existent sub-project "validator"' @@ -46619,22 +46654,22 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/seqmasks_io' /bin/echo 'Warning: non-existent sub-project "eutils"' Warning: non-existent sub-project "eutils" -/usr/bin/make -C align_format -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C align_format -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' TEST -- objtools/align_format/unit_test/align_format_unit_test make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/align_format/unit_test' @@ -46656,78 +46691,78 @@ Warning: non-existent sub-project "ctools" /bin/echo 'Warning: non-existent sub-project "sra"' Warning: non-existent sub-project "sra" -/usr/bin/make -C algo -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C algo -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C dustmask -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make -C winmask -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C winmask -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/winmask' /bin/echo 'Warning: non-existent sub-project "sequence"' Warning: non-existent sub-project "sequence" -/usr/bin/make -C blast -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C composition_adjustment -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C core -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -C dbindex -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C dbindex -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C makeindex -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' SKIP -- algo/blast/dbindex/makeindex/makeindex make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C api -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -C proteinkmer -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -C format -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C format -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -C blastinput -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C blastinput -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C unit_test -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' @@ -46736,249 +46771,249 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/blastinput' /bin/echo 'Warning: non-existent sub-project "blast_sra_input"' Warning: non-existent sub-project "blast_sra_input" -/usr/bin/make -C igblast -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C igblast -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/igblast' /bin/echo 'Warning: non-existent sub-project "gumbel_params"' Warning: non-existent sub-project "gumbel_params" -/usr/bin/make -C unit_tests -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +/usr/bin/make -C unit_tests -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C blast_format -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +make[7]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C blast_format -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -/usr/bin/make -C blastdb -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -C seqdb_reader -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -C api -w -j8 --jobserver-auth=13,14 check_add_r || exit 5 +/usr/bin/make -C api -w -j15 --jobserver-auth=13,14 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/aalookup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/seqsrc_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/delta_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/ntlookup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/setupfactory_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/search_strategy_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/redoalignment_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/queryinfo_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/querydata_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastsetup_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastextend_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastdiag_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/optionshandle_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/traceback_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/psiblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/phiblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/split_query_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/scoreblk_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/hspstream_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rps_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/gapinfo_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blasthits_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/linkhsp_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastengine_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/version_reference_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/ntscan_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/aascan_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/remote_blast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/uniform_search_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastfilter_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blastoptions_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/bl2seq_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/stat_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/magicblast_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rmblast_blasthits_unit_test make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[9]: warning: -j8 forced in submake: resetting jobserver mode. +make[9]: warning: -j15 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/rmblast_traceback_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast' -/usr/bin/make -C segmask -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C segmask -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/segmask' /bin/echo 'Warning: non-existent sub-project "align"' @@ -47004,21 +47039,21 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo' -/usr/bin/make -C misc -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C misc -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +make[5]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C third_party -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/third_party' -/usr/bin/make -C third_party_static -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C third_party_static -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: -DLL make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/third_party_static' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'mark-as-disabled_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/third_party_static' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/third_party_static' @@ -47040,18 +47075,18 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -w -j8 --jobserver-auth=11,12 check_add_r || exit 5 +make[6]: warning: -j15 forced in submake: resetting jobserver mode. +/usr/bin/make -C test -w -j15 --jobserver-auth=11,12 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp/test' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp/test' TEST -- misc/jsonwrapp/test/test_jsonwrapp make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp/test' -make[8]: warning: -j8 forced in submake: resetting jobserver mode. +make[8]: warning: -j15 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp/test' TEST -- misc/jsonwrapp/test/test_jsonwrapp10 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc/jsonwrapp/test' @@ -47071,9 +47106,9 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -w -j8 --jobserver-auth=7,8 check_add_r || exit 5 +/usr/bin/make -C app -w -j15 --jobserver-auth=7,8 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' -make[5]: warning: -j8 forced in submake: resetting jobserver mode. +make[5]: warning: -j15 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' Warning: non-existent sub-project "asn2asn" /bin/echo 'Warning: non-existent sub-project "asn2fasta"' @@ -47088,55 +47123,55 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blast -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastp make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blastx make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/tblastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/tblastx make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/psiblast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/rpsblast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/rpstblastn make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blast_formatter make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/blast_report make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/deltablast make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' SKIP -- app/blast/seedtop make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blast' @@ -47156,67 +47191,67 @@ Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "igblast"' Warning: non-existent sub-project "igblast" -/usr/bin/make -C winmasker -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C winmasker -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' SKIP -- app/winmasker/winmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -C dustmasker -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C dustmasker -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' SKIP -- app/dustmasker/dustmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -C segmasker -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C segmasker -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' SKIP -- app/segmasker/segmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -C blastdb -w -j8 --jobserver-auth=9,10 check_add_r || exit 5 +/usr/bin/make -C blastdb -w -j15 --jobserver-auth=9,10 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app' -make[6]: warning: -j8 forced in submake: resetting jobserver mode. +make[6]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcmd make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeblastdb make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_aliastool make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcheck make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/convert2blastmask make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcp make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeprofiledb make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_convert make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' -make[7]: warning: -j8 forced in submake: resetting jobserver mode. +make[7]: warning: -j15 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdb_path make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/app/blastdb' @@ -47377,12 +47412,12 @@ Testing, please wait... -OK -- [serial/datatool] datatool.sh (real 0.58, user 0.31, sys 0.09) +OK -- [serial/datatool] datatool.sh (real 0.34, user 0.26, sys 0.07) SKP -- [serial/datatool] datatool_xml.sh -ERR [200] -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.05, user 0.01, sys 0.01) -ERR [200] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 0.30, user 0.06, sys 0.02) -ERR [200] -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.02, user 0.01, sys 0.02) -ERR [200] -- [algo/blast/unit_tests/api] aascan_unit_test (real 0.07, user 0.06, sys 0.01) +ERR [200] -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.02, user 0.02, sys 0.00) +ERR [200] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 0.09, user 0.04, sys 0.02) +ERR [200] -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.02, user 0.02, sys 0.00) +ERR [200] -- [algo/blast/unit_tests/api] aascan_unit_test (real 0.05, user 0.05, sys 0.00) ABS -- [misc/jsonwrapp/test] test_jsonwrapp ABS -- [misc/jsonwrapp/test] test_jsonwrapp10 @@ -47395,22 +47430,22 @@ make[3]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build' make[2]: *** [Makefile:33: check] Error 2 make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.11.0+ds/c++' -dh_auto_test: error: cd c\+\+ && /usr/bin/make -j8 check VERBOSE=1 returned exit code 2 +dh_auto_test: error: cd c\+\+ && /usr/bin/make -j15 check VERBOSE=1 returned exit code 2 make[1]: [debian/rules:81: override_dh_auto_test] Error 25 (ignored) c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err -ERR [200] -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.05, user 0.01, sys 0.01) -ERR [200] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 0.30, user 0.06, sys 0.02) -ERR [200] -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.02, user 0.01, sys 0.02) -ERR [200] -- [algo/blast/unit_tests/api] aascan_unit_test (real 0.07, user 0.06, sys 0.01) +ERR [200] -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.02, user 0.02, sys 0.00) +ERR [200] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 0.09, user 0.04, sys 0.02) +ERR [200] -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.02, user 0.02, sys 0.00) +ERR [200] -- [algo/blast/unit_tests/api] aascan_unit_test (real 0.05, user 0.05, sys 0.00) ====================================================================== gene_info_unit_test ====================================================================== -14658/000/0000/PB DF7539425A45E641 0001/0001 2024-01-14T10:21:24.361747 ionos2-i386 UNK_CLIENT UNK_SESSION gene_info_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test/gene_info_unit_test -14658/000/0000/PB DF7539425A45E641 0002/0002 2024-01-14T10:21:24.362138 ionos2-i386 UNK_CLIENT UNK_SESSION gene_info_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/objtools/blast/gene_info_reader/unit_test/gene_info_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 +18932/000/0000/PB AF2849F47B174C71 0001/0001 2025-02-16T19:16:55.981178 i-capture-the-hostname UNK_CLIENT UNK_SESSION gene_info_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test/gene_info_unit_test +18932/000/0000/PB AF2849F47B174C71 0002/0002 2025-02-16T19:16:55.981544 i-capture-the-hostname UNK_CLIENT UNK_SESSION gene_info_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/objtools/blast/gene_info_reader/unit_test/gene_info_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 Running 4 test cases... *** No errors detected @@ -47418,13 +47453,13 @@ Test setup error: *** No errors detected -14658/000/0000/PE DF7539425A45E641 0003/0003 2024-01-14T10:21:24.365331 ionos2-i386 UNK_CLIENT UNK_SESSION gene_info_unit_test stop 200 0.010150002 -real 0.05 -user 0.01 -sys 0.01 -Start time : 01/14/2024 10:21:24 -Stop time : 01/14/2024 10:21:24 -Load averages: 6.34 12.93 12.79 +18932/000/0000/PE AF2849F47B174C71 0003/0003 2025-02-16T19:16:55.983741 i-capture-the-hostname UNK_CLIENT UNK_SESSION gene_info_unit_test stop 200 0.005694941 +real 0.02 +user 0.02 +sys 0.00 +Start time : 02/16/2025 19:16:55 +Stop time : 02/16/2025 19:16:55 +Load averages: 12.84 24.72 21.29 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 200 @@ -47434,8 +47469,8 @@ proteinkmer_unit_test ====================================================================== -14730/000/0000/PB DF75398A5A45E641 0001/0001 2024-01-14T10:21:24.667310 ionos2-i386 UNK_CLIENT UNK_SESSION proteinkmer_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test -14730/000/0000/PB DF75398A5A45E641 0002/0002 2024-01-14T10:21:24.667811 ionos2-i386 UNK_CLIENT UNK_SESSION proteinkmer_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 +19007/000/0000/PB AF284A3F7B174C81 0001/0001 2025-02-16T19:16:56.126072 i-capture-the-hostname UNK_CLIENT UNK_SESSION proteinkmer_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test +19007/000/0000/PB AF284A3F7B174C81 0002/0002 2025-02-16T19:16:56.126520 i-capture-the-hostname UNK_CLIENT UNK_SESSION proteinkmer_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 Running 31 test cases... *** No errors detected @@ -47443,13 +47478,13 @@ Test setup error: *** No errors detected -14730/000/0000/PE DF75398A5A45E641 0003/0003 2024-01-14T10:21:24.724380 ionos2-i386 UNK_CLIENT UNK_SESSION proteinkmer_unit_test stop 200 0.146246934 -real 0.30 -user 0.06 +19007/000/0000/PE AF284A3F7B174C81 0003/0003 2025-02-16T19:16:56.138087 i-capture-the-hostname UNK_CLIENT UNK_SESSION proteinkmer_unit_test stop 200 0.031960109 +real 0.09 +user 0.04 sys 0.02 -Start time : 01/14/2024 10:21:24 -Stop time : 01/14/2024 10:21:24 -Load averages: 6.34 12.93 12.79 +Start time : 02/16/2025 19:16:56 +Stop time : 02/16/2025 19:16:56 +Load averages: 12.84 24.72 21.29 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 200 @@ -47459,8 +47494,8 @@ blastdiag_unit_test ====================================================================== -14802/000/0000/PB DF7539D25A45E641 0001/0001 2024-01-14T10:21:24.806583 ionos2-i386 UNK_CLIENT UNK_SESSION blastdiag_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/blastdiag_unit_test -14802/000/0000/PB DF7539D25A45E641 0002/0002 2024-01-14T10:21:24.806977 ionos2-i386 UNK_CLIENT UNK_SESSION blastdiag_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/blastdiag_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 +19081/000/0000/PB AF284A897B174C81 0001/0001 2025-02-16T19:16:56.224365 i-capture-the-hostname UNK_CLIENT UNK_SESSION blastdiag_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/blastdiag_unit_test +19081/000/0000/PB AF284A897B174C81 0002/0002 2025-02-16T19:16:56.224741 i-capture-the-hostname UNK_CLIENT UNK_SESSION blastdiag_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/blastdiag_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 Running 3 test cases... *** No errors detected @@ -47468,13 +47503,13 @@ Test setup error: *** No errors detected -14802/000/0000/PE DF7539D25A45E641 0003/0003 2024-01-14T10:21:24.810187 ionos2-i386 UNK_CLIENT UNK_SESSION blastdiag_unit_test stop 200 0.006198093 +19081/000/0000/PE AF284A897B174C81 0003/0003 2025-02-16T19:16:56.227005 i-capture-the-hostname UNK_CLIENT UNK_SESSION blastdiag_unit_test stop 200 0.004431077 real 0.02 -user 0.01 -sys 0.02 -Start time : 01/14/2024 10:21:24 -Stop time : 01/14/2024 10:21:24 -Load averages: 6.34 12.93 12.79 +user 0.02 +sys 0.00 +Start time : 02/16/2025 19:16:56 +Stop time : 02/16/2025 19:16:56 +Load averages: 12.84 24.72 21.29 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 200 @@ -47484,8 +47519,8 @@ aascan_unit_test ====================================================================== -14874/000/0000/PB DF753A1A5A45E641 0001/0001 2024-01-14T10:21:24.932264 ionos2-i386 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test -14874/000/0000/PB DF753A1A5A45E641 0002/0002 2024-01-14T10:21:24.932705 ionos2-i386 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 +19155/000/0000/PB AF284AD37B174C81 0001/0001 2025-02-16T19:16:56.341352 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.11.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test +19155/000/0000/PB AF284AD37B174C81 0002/0002 2025-02-16T19:16:56.341751 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.11.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=Feb++1+2021+02:23:21&ncbi_app_package_name=blast&ncbi_app_package_version=2.11.0&ncbi_app_package_date=Feb++1+2021+02:23:21&ncbi_app_version=2.11.0 Running 4 test cases... *** No errors detected @@ -47493,13 +47528,13 @@ Test setup error: *** No errors detected -14874/000/0000/PE DF753A1A5A45E641 0003/0003 2024-01-14T10:21:24.936514 ionos2-i386 UNK_CLIENT UNK_SESSION aascan_unit_test stop 200 0.009644065 -real 0.07 -user 0.06 -sys 0.01 -Start time : 01/14/2024 10:21:24 -Stop time : 01/14/2024 10:21:24 -Load averages: 6.34 12.93 12.79 +19155/000/0000/PE AF284AD37B174C81 0003/0003 2025-02-16T19:16:56.344291 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test stop 200 0.006399064 +real 0.05 +user 0.05 +sys 0.00 +Start time : 02/16/2025 19:16:56 +Stop time : 02/16/2025 19:16:56 +Load averages: 12.84 24.72 21.29 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 200 @@ -47710,8 +47745,8 @@ dh_gencontrol -O--sourcedirectory=c\+\+ dh_md5sums -O--sourcedirectory=c\+\+ dh_builddeb -O--sourcedirectory=c\+\+ -dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.11.0+ds-1_i386.deb'. dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.11.0+ds-1_all.deb'. +dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.11.0+ds-1_i386.deb'. dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.11.0+ds-1_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ncbi-blast+_2.11.0+ds-1_i386.changes @@ -47721,12 +47756,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/103896/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/28819 and its subdirectories -I: Current time: Sun Jan 14 10:26:53 -12 2024 -I: pbuilder-time-stamp: 1705271213 +I: removing directory /srv/workspace/pbuilder/103896 and its subdirectories +I: Current time: Sun Feb 16 19:21:00 +14 2025 +I: pbuilder-time-stamp: 1739683260