Diff of the two buildlogs: -- --- b1/build.log 2021-10-10 08:43:52.652249780 +0000 +++ b2/build.log 2021-10-10 08:51:51.835912850 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Nov 12 02:58:59 -12 2022 -I: pbuilder-time-stamp: 1668265139 +I: Current time: Sun Oct 10 22:43:56 +14 2021 +I: pbuilder-time-stamp: 1633855436 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Sun Jul 18 07:35:03 2021 -12 +gpgv: Signature made Mon Jul 19 09:35:03 2021 +14 gpgv: using RSA key EBF30A30A8D9C63BDA44C6945FB33F9359E9ED08 gpgv: issuer "anbe@debian.org" gpgv: Can't check signature: No public key @@ -33,136 +33,170 @@ dpkg-source: info: applying fix_float_precision I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/599709/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='b3d50f7eb1f9421fb9032ddf98d9d99e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='599709' - PS1='# ' - PS2='> ' + INVOCATION_ID=915bf41869144aa281145097243d10f4 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2761452 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.HMg3KShns7/pbuilderrc_v4kc --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.HMg3KShns7/b1 --logfile b1/build.log htslib_1.9-12~deb10u1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.HMg3KShns7/pbuilderrc_wnPB --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.HMg3KShns7/b2 --logfile b2/build.log htslib_1.9-12~deb10u1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos15-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Nov 9 02:47 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/599709/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Oct 10 22:44 sh -> bash + lrwxrwxrwx 1 root root 4 Oct 7 22:24 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -268,7 +302,7 @@ Get: 54 http://deb.debian.org/debian buster/main amd64 liblzma-dev amd64 5.2.4-1 [210 kB] Get: 55 http://deb.debian.org/debian buster/main amd64 libssl-dev amd64 1.1.1d-0+deb10u7 [1795 kB] Get: 56 http://deb.debian.org/debian buster/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] -Fetched 25.2 MB in 0s (52.7 MB/s) +Fetched 25.2 MB in 9s (2938 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -515,7 +549,8 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/htslib-1.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../htslib_1.9-12~deb10u1_source.changes +hostname: Name or service not known +I: Running cd /build/htslib-1.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../htslib_1.9-12~deb10u1_source.changes dpkg-buildpackage: info: source package htslib dpkg-buildpackage: info: source version 1.9-12~deb10u1 dpkg-buildpackage: info: source distribution buster @@ -528,7 +563,7 @@ debian/rules override_dh_auto_clean make[1]: Entering directory '/build/htslib-1.9' dh_auto_clean - make -j16 distclean + make -j15 distclean make[2]: Entering directory '/build/htslib-1.9' rm -f test/*.tmp test/*.tmp.* test/tabix/*.tmp.* test/tabix/FAIL* rm -f libhts.so libhts.so.* @@ -638,7 +673,7 @@ LDFLAGS="$(dpkg-buildflags --get LDFLAGS)" \ PACKAGE_VERSION="1.9-12~deb10u1" \ libdir=/usr/lib/x86_64-linux-gnu - make -j16 "CFLAGS=-g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -flto" "CPPFLAGS=-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,-flto -Wl,-flto" PACKAGE_VERSION=1.9-12\~deb10u1 libdir=/usr/lib/x86_64-linux-gnu + make -j15 "CFLAGS=-g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -flto" "CPPFLAGS=-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,-flto -Wl,-flto" PACKAGE_VERSION=1.9-12\~deb10u1 libdir=/usr/lib/x86_64-linux-gnu make[2]: Entering directory '/build/htslib-1.9' gcc -g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -flto -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kfunc.o kfunc.c gcc -g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -flto -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o knetfile.o knetfile.c @@ -762,7 +797,7 @@ make[2]: Leaving directory '/build/htslib-1.9' make[1]: Leaving directory '/build/htslib-1.9' dh_auto_test - make -j16 test VERBOSE=1 + make -j15 test VERBOSE=1 make[1]: Entering directory '/build/htslib-1.9' echo '#define HTS_VERSION "1.9"' > version.h gcc -Wall -g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts.o hts.c @@ -2680,11 +2715,11 @@ ./test_view -@4 range.bam CHROMOSOME_II:2980-2980 CHROMOSOME_IV:1500-1500 CHROMOSOME_II:2980-2980 CHROMOSOME_I:1000-1100 > range.tmp ./compare_sam.pl range.tmp range.out test_vcf_api: - /build/htslib-1.9/test/test-vcf-api /tmp/8SZ8OZyLt8/test-vcf-api.bcf + /build/htslib-1.9/test/test-vcf-api /tmp/FLif51VC4D/test-vcf-api.bcf .. ok test_vcf_sweep: - /build/htslib-1.9/test/test-vcf-sweep /tmp/8SZ8OZyLt8/test-vcf-api.bcf + /build/htslib-1.9/test/test-vcf-sweep /tmp/FLif51VC4D/test-vcf-api.bcf .. ok test_vcf_various: @@ -2704,43 +2739,43 @@ .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 16506107 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1460424515 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 225438479 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 765850218 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 43105705 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1297664584 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 1191174702 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1495031906 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 913292004 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1436975973 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 952607567 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1222033577 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 996524662 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 422674873 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 149668599 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1540136572 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 248397960 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 831350490 .. ok test-bcf-sr: - /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/8SZ8OZyLt8 -s 1062127162 + /build/htslib-1.9/test/test-bcf-sr.pl -t /tmp/FLif51VC4D -s 1085507821 .. ok test_command: @@ -2748,15 +2783,15 @@ .. ok test_convert_padded_header: - /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/8SZ8OZyLt8/headernul0.bam + /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/FLif51VC4D/headernul0.bam .. ok test_convert_padded_header: - /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/8SZ8OZyLt8/headernul1.bam + /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/FLif51VC4D/headernul1.bam .. ok test_convert_padded_header: - /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/8SZ8OZyLt8/headernul678.bam + /build/htslib-1.9/test/test_view -t ce.fa -C /tmp/FLif51VC4D/headernul678.bam .. ok test_rebgzip: Alternate zlib/deflate library detected @@ -2826,11 +2861,11 @@ done dh_auto_install -- prefix=/usr install -d /build/htslib-1.9/debian/tmp - make -j16 install DESTDIR=/build/htslib-1.9/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr + make -j15 install DESTDIR=/build/htslib-1.9/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr make[2]: Entering directory '/build/htslib-1.9' mkdir -p -m 755 /build/htslib-1.9/debian/tmp/usr/bin /build/htslib-1.9/debian/tmp/usr/include /build/htslib-1.9/debian/tmp/usr/include/htslib /build/htslib-1.9/debian/tmp/usr/lib/x86_64-linux-gnu /build/htslib-1.9/debian/tmp/usr/share/man/man1 /build/htslib-1.9/debian/tmp/usr/share/man/man5 /build/htslib-1.9/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig -if test -n ""; then mkdir -p -m 755 /build/htslib-1.9/debian/tmp; fi gcc -Wall -g -O2 -ffile-prefix-map=/build/htslib-1.9=. -fstack-protector-strong -Wformat -Werror=format-security -flto -I. -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts.pico hts.c +if test -n ""; then mkdir -p -m 755 /build/htslib-1.9/debian/tmp; fi sed -e 's#@-includedir@#/usr/include#g;s#@-libdir@#/usr/lib/x86_64-linux-gnu#g;s#@-PACKAGE_VERSION@#1.9#g' htslib.pc.tmp > /build/htslib-1.9/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/htslib.pc chmod 644 /build/htslib-1.9/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/htslib.pc gcc -shared -Wl,-soname,libhts.so.2 -Wl,-z,relro -Wl,-z,now -Wl,-flto -o libhts.so kfunc.pico knetfile.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico hfile.pico hfile_net.pico hts.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_samtools.pico cram/cram_stats.pico cram/files.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/rANS_static.pico cram/sam_header.pico cram/string_alloc.pico hfile_libcurl.pico hfile_gcs.pico hfile_s3.pico -ldeflate -llzma -lbz2 -lz -lm -lcurl -lcrypto -lpthread @@ -2897,14 +2932,14 @@ debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/htslib-1.9' dh_installchangelogs NEWS - install -p -m0644 debian/changelog debian/libhts-private-dev/usr/share/doc/libhts-private-dev/changelog.Debian - install -p -m0644 NEWS debian/libhts-private-dev/usr/share/doc/libhts-private-dev/changelog + install -p -m0644 debian/changelog debian/tabix/usr/share/doc/tabix/changelog.Debian + install -p -m0644 NEWS debian/tabix/usr/share/doc/tabix/changelog install -p -m0644 debian/changelog debian/libhts-dev/usr/share/doc/libhts-dev/changelog.Debian install -p -m0644 NEWS debian/libhts-dev/usr/share/doc/libhts-dev/changelog install -p -m0644 debian/changelog debian/htslib-test/usr/share/doc/htslib-test/changelog.Debian install -p -m0644 NEWS debian/htslib-test/usr/share/doc/htslib-test/changelog - install -p -m0644 debian/changelog debian/tabix/usr/share/doc/tabix/changelog.Debian - install -p -m0644 NEWS debian/tabix/usr/share/doc/tabix/changelog + install -p -m0644 debian/changelog debian/libhts-private-dev/usr/share/doc/libhts-private-dev/changelog.Debian + install -p -m0644 NEWS debian/libhts-private-dev/usr/share/doc/libhts-private-dev/changelog install -p -m0644 debian/changelog debian/libhts2/usr/share/doc/libhts2/changelog.Debian install -p -m0644 NEWS debian/libhts2/usr/share/doc/libhts2/changelog make[1]: Leaving directory '/build/htslib-1.9' @@ -2912,21 +2947,21 @@ install -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./htsfile.1 debian/tabix/usr/share/man/man1/htsfile.1 install -p -m0644 ./tabix.1 debian/tabix/usr/share/man/man1/tabix.1 - man -l --recode UTF-8 ./debian/libhts-dev/usr/share/man/man5/faidx.5 > debian/libhts-dev/usr/share/man/man5/faidx.5.dh-new - man -l --recode UTF-8 ./debian/tabix/usr/share/man/man1/htsfile.1 > debian/tabix/usr/share/man/man1/htsfile.1.dh-new - man -l --recode UTF-8 ./debian/libhts-dev/usr/share/man/man5/sam.5 > debian/libhts-dev/usr/share/man/man5/sam.5.dh-new man -l --recode UTF-8 ./debian/libhts-dev/usr/share/man/man5/vcf.5 > debian/libhts-dev/usr/share/man/man5/vcf.5.dh-new + man -l --recode UTF-8 ./debian/libhts-dev/usr/share/man/man5/sam.5 > debian/libhts-dev/usr/share/man/man5/sam.5.dh-new + man -l --recode UTF-8 ./debian/libhts-dev/usr/share/man/man5/faidx.5 > debian/libhts-dev/usr/share/man/man5/faidx.5.dh-new man -l --recode UTF-8 ./debian/tabix/usr/share/man/man1/tabix.1 > debian/tabix/usr/share/man/man1/tabix.1.dh-new - mv debian/libhts-dev/usr/share/man/man5/faidx.5.dh-new debian/libhts-dev/usr/share/man/man5/faidx.5 - chmod 0644 -- debian/libhts-dev/usr/share/man/man5/faidx.5 - mv debian/tabix/usr/share/man/man1/htsfile.1.dh-new debian/tabix/usr/share/man/man1/htsfile.1 - chmod 0644 -- debian/tabix/usr/share/man/man1/htsfile.1 - mv debian/libhts-dev/usr/share/man/man5/sam.5.dh-new debian/libhts-dev/usr/share/man/man5/sam.5 - chmod 0644 -- debian/libhts-dev/usr/share/man/man5/sam.5 + man -l --recode UTF-8 ./debian/tabix/usr/share/man/man1/htsfile.1 > debian/tabix/usr/share/man/man1/htsfile.1.dh-new mv debian/libhts-dev/usr/share/man/man5/vcf.5.dh-new debian/libhts-dev/usr/share/man/man5/vcf.5 chmod 0644 -- debian/libhts-dev/usr/share/man/man5/vcf.5 + mv debian/libhts-dev/usr/share/man/man5/sam.5.dh-new debian/libhts-dev/usr/share/man/man5/sam.5 + chmod 0644 -- debian/libhts-dev/usr/share/man/man5/sam.5 + mv debian/libhts-dev/usr/share/man/man5/faidx.5.dh-new debian/libhts-dev/usr/share/man/man5/faidx.5 + chmod 0644 -- debian/libhts-dev/usr/share/man/man5/faidx.5 mv debian/tabix/usr/share/man/man1/tabix.1.dh-new debian/tabix/usr/share/man/man1/tabix.1 chmod 0644 -- debian/tabix/usr/share/man/man1/tabix.1 + mv debian/tabix/usr/share/man/man1/htsfile.1.dh-new debian/tabix/usr/share/man/man1/htsfile.1 + chmod 0644 -- debian/tabix/usr/share/man/man1/htsfile.1 dh_lintian install -d debian/htslib-test/usr/share/lintian/overrides install -p -m0644 debian/htslib-test.lintian-overrides debian/htslib-test/usr/share/lintian/overrides/htslib-test @@ -2944,15 +2979,15 @@ Using 1626636708 as canonical time Normalizing debian/htslib-test/usr/share/htslib-test/test/bgziptest.txt.gz using File::StripNondeterminism::handlers::gzip dh_compress - cd debian/tabix + cd debian/libhts2 cd debian/htslib-test + cd debian/tabix cd debian/libhts-private-dev cd debian/libhts-dev - cd debian/libhts2 - chmod a-x usr/share/doc/libhts-private-dev/changelog usr/share/doc/libhts-private-dev/changelog.Debian chmod a-x usr/share/doc/libhts2/changelog usr/share/doc/libhts2/changelog.Debian - gzip -9nf usr/share/doc/libhts-private-dev/changelog usr/share/doc/libhts-private-dev/changelog.Debian + chmod a-x usr/share/doc/libhts-private-dev/changelog usr/share/doc/libhts-private-dev/changelog.Debian gzip -9nf usr/share/doc/libhts2/changelog usr/share/doc/libhts2/changelog.Debian + gzip -9nf usr/share/doc/libhts-private-dev/changelog usr/share/doc/libhts-private-dev/changelog.Debian chmod a-x usr/share/doc/htslib-test/changelog usr/share/doc/htslib-test/changelog.Debian cd '/build/htslib-1.9' cd '/build/htslib-1.9' @@ -2965,111 +3000,111 @@ gzip -9nf usr/share/doc/libhts-dev/changelog usr/share/doc/libhts-dev/changelog.Debian usr/share/man/man5/faidx.5 usr/share/man/man5/sam.5 usr/share/man/man5/vcf.5 cd '/build/htslib-1.9' dh_fixperms + find debian/tabix -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 + find debian/htslib-test -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhts-private-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhts2 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhts-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 - find debian/tabix -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 - find debian/htslib-test -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhts2 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tabix ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts-private-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts2/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts2/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libhts2/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/tabix/usr/share/doc -type f -a -true -a ! -regex 'debian/tabix/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/libhts2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/tabix/usr/share/doc -type f -a -true -a ! -regex 'debian/tabix/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libhts2/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tabix/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/tabix/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-private-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts-private-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libhts2 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/tabix/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libhts-private-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts2/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/tabix -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libhts-private-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts-private-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/tabix/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x - find debian/libhts-private-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/tabix/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libhts-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/htslib-test ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/libhts-private-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/share/man debian/libhts-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libhts-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/htslib-test/usr/share/doc -type f -a -true -a ! -regex 'debian/htslib-test/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libhts-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/libhts-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/htslib-test/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/libhts-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/htslib-test/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/htslib-test -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing dh_strip - install -d debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca - objcopy --only-keep-debug --compress-debug-sections debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug - chmod 0644 -- debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug - chown 0:0 -- debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 + strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhts-dev/usr/lib/x86_64-linux-gnu/libhts.a install -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/tabix debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/10/7e52b9275c3e63b7fbf478bde45d9d034929e1.debug - objcopy --add-gnu-debuglink debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 + install -d debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca + objcopy --only-keep-debug --compress-debug-sections debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/10/7e52b9275c3e63b7fbf478bde45d9d034929e1.debug chown 0:0 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/10/7e52b9275c3e63b7fbf478bde45d9d034929e1.debug strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/tabix objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/10/7e52b9275c3e63b7fbf478bde45d9d034929e1.debug debian/tabix/usr/bin/tabix - install -d debian/.debhelper/libhts2/dbgsym-root/usr/share/doc - ln -s libhts2 debian/.debhelper/libhts2/dbgsym-root/usr/share/doc/libhts2-dbgsym + chmod 0644 -- debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug + chown 0:0 -- debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 + objcopy --add-gnu-debuglink debian/.debhelper/libhts2/dbgsym-root/usr/lib/debug/.build-id/ca/f87bb597cabb422e93c56244f979d0030f5449.debug debian/libhts2/usr/lib/x86_64-linux-gnu/libhts.so.1.9 install -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/htsfile debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/b6/dad9e1febbb284c895a4bd8e77c180b01bd10f.debug + install -d debian/.debhelper/libhts2/dbgsym-root/usr/share/doc + ln -s libhts2 debian/.debhelper/libhts2/dbgsym-root/usr/share/doc/libhts2-dbgsym chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/b6/dad9e1febbb284c895a4bd8e77c180b01bd10f.debug chown 0:0 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/b6/dad9e1febbb284c895a4bd8e77c180b01bd10f.debug strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/htsfile +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/kfunc.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/knetfile.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/kstring.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/bcf_sr_sort.o: plugin needed to handle lto object objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/b6/dad9e1febbb284c895a4bd8e77c180b01bd10f.debug debian/tabix/usr/bin/htsfile - strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhts-dev/usr/lib/x86_64-linux-gnu/libhts.a +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/bgzf.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/errmod.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/faidx.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hfile.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hfile_net.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hts.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hts_os.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/md5.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/multipart.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/probaln.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/realn.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/regidx.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/sam.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/synced_bcf_reader.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/vcf_sweep.o: plugin needed to handle lto object install -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/bgzip debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/21/2e1c72dca523aeffa785464c4578002d2e6291.debug +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/tbx.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/textutils.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/thread_pool.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/vcf.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/vcfutils.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_codecs.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_decode.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_encode.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_external.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_index.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_io.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_samtools.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/cram_stats.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/files.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/mFILE.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/open_trace_file.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/pooled_alloc.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/rANS_static.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/sam_header.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/string_alloc.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hfile_libcurl.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hfile_gcs.o: plugin needed to handle lto object +strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/st5Z2ovS/hfile_s3.o: plugin needed to handle lto object chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/21/2e1c72dca523aeffa785464c4578002d2e6291.debug chown 0:0 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/21/2e1c72dca523aeffa785464c4578002d2e6291.debug strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/bgzip objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/21/2e1c72dca523aeffa785464c4578002d2e6291.debug debian/tabix/usr/bin/bgzip install -d debian/.debhelper/tabix/dbgsym-root/usr/share/doc ln -s tabix debian/.debhelper/tabix/dbgsym-root/usr/share/doc/tabix-dbgsym -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/kfunc.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/knetfile.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/kstring.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/bcf_sr_sort.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/bgzf.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/errmod.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/faidx.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hfile.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hfile_net.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hts.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hts_os.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/md5.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/multipart.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/probaln.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/realn.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/regidx.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/sam.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/synced_bcf_reader.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/vcf_sweep.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/tbx.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/textutils.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/thread_pool.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/vcf.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/vcfutils.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_codecs.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_decode.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_encode.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_external.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_index.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_io.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_samtools.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/cram_stats.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/files.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/mFILE.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/open_trace_file.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/pooled_alloc.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/rANS_static.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/sam_header.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/string_alloc.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hfile_libcurl.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hfile_gcs.o: plugin needed to handle lto object -strip: debian/libhts-dev/usr/lib/x86_64-linux-gnu/stczjWEO/hfile_s3.o: plugin needed to handle lto object dh_makeshlibs rm -f debian/libhts2/DEBIAN/shlibs install -d debian/libhts2/DEBIAN @@ -3093,23 +3128,23 @@ install -d debian/libhts-private-dev/DEBIAN install -d debian/htslib-test/DEBIAN dh_gencontrol - echo misc:Depends= >> debian/htslib-test.substvars - echo misc:Pre-Depends= >> debian/htslib-test.substvars - dpkg-gencontrol -phtslib-test -ldebian/changelog -Tdebian/htslib-test.substvars -Pdebian/htslib-test echo misc:Depends= >> debian/libhts-dev.substvars echo misc:Pre-Depends= >> debian/libhts-dev.substvars dpkg-gencontrol -plibhts-dev -ldebian/changelog -Tdebian/libhts-dev.substvars -Pdebian/libhts-dev echo misc:Depends= >> debian/libhts-private-dev.substvars echo misc:Pre-Depends= >> debian/libhts-private-dev.substvars dpkg-gencontrol -plibhts-private-dev -ldebian/changelog -Tdebian/libhts-private-dev.substvars -Pdebian/libhts-private-dev - echo misc:Depends= >> debian/tabix.substvars - echo misc:Pre-Depends= >> debian/tabix.substvars - install -d debian/.debhelper/tabix/dbgsym-root/DEBIAN - dpkg-gencontrol -ptabix -ldebian/changelog -Tdebian/tabix.substvars -Pdebian/.debhelper/tabix/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=tabix-dbgsym "-DDepends=tabix (= \${binary:Version})" "-DDescription=debug symbols for tabix" "-DBuild-Ids=107e52b9275c3e63b7fbf478bde45d9d034929e1 212e1c72dca523aeffa785464c4578002d2e6291 b6dad9e1febbb284c895a4bd8e77c180b01bd10f" -DSection=debug -UReplaces -UBreaks + echo misc:Depends= >> debian/htslib-test.substvars + echo misc:Pre-Depends= >> debian/htslib-test.substvars + dpkg-gencontrol -phtslib-test -ldebian/changelog -Tdebian/htslib-test.substvars -Pdebian/htslib-test echo misc:Depends= >> debian/libhts2.substvars echo misc:Pre-Depends= >> debian/libhts2.substvars install -d debian/.debhelper/libhts2/dbgsym-root/DEBIAN dpkg-gencontrol -plibhts2 -ldebian/changelog -Tdebian/libhts2.substvars -Pdebian/.debhelper/libhts2/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libhts2-dbgsym "-DDepends=libhts2 (= \${binary:Version})" "-DDescription=debug symbols for libhts2" -DBuild-Ids=caf87bb597cabb422e93c56244f979d0030f5449 -DSection=debug -UReplaces -UBreaks + echo misc:Depends= >> debian/tabix.substvars + echo misc:Pre-Depends= >> debian/tabix.substvars + install -d debian/.debhelper/tabix/dbgsym-root/DEBIAN + dpkg-gencontrol -ptabix -ldebian/changelog -Tdebian/tabix.substvars -Pdebian/.debhelper/tabix/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=tabix-dbgsym "-DDepends=tabix (= \${binary:Version})" "-DDescription=debug symbols for tabix" "-DBuild-Ids=107e52b9275c3e63b7fbf478bde45d9d034929e1 212e1c72dca523aeffa785464c4578002d2e6291 b6dad9e1febbb284c895a4bd8e77c180b01bd10f" -DSection=debug -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libhts2/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libhts2/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibhts2 -ldebian/changelog -Tdebian/libhts2.substvars -Pdebian/libhts2 @@ -3128,15 +3163,15 @@ chown 0:0 -- debian/htslib-test/DEBIAN/control dh_md5sums cd debian/libhts2 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/libhts-private-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/tabix >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/libhts-private-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts2/DEBIAN/md5sums chown 0:0 -- debian/libhts2/DEBIAN/md5sums + cd debian/libhts-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts-private-dev/DEBIAN/md5sums chown 0:0 -- debian/libhts-private-dev/DEBIAN/md5sums chmod 0644 -- debian/tabix/DEBIAN/md5sums chown 0:0 -- debian/tabix/DEBIAN/md5sums - cd debian/libhts-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/htslib-test >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts-dev/DEBIAN/md5sums chown 0:0 -- debian/libhts-dev/DEBIAN/md5sums @@ -3150,19 +3185,19 @@ chown 0:0 -- debian/.debhelper/tabix/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/libhts2 .. - dpkg-deb --build debian/.debhelper/libhts2/dbgsym-root .. - dpkg-deb --build debian/libhts-private-dev .. dpkg-deb --build debian/libhts-dev .. dpkg-deb --build debian/.debhelper/tabix/dbgsym-root .. - dpkg-deb --build debian/htslib-test .. + dpkg-deb --build debian/libhts-private-dev .. + dpkg-deb --build debian/.debhelper/libhts2/dbgsym-root .. dpkg-deb --build debian/tabix .. + dpkg-deb --build debian/htslib-test .. +dpkg-deb: building package 'htslib-test' in '../htslib-test_1.9-12~deb10u1_all.deb'. +dpkg-deb: building package 'tabix' in '../tabix_1.9-12~deb10u1_amd64.deb'. dpkg-deb: building package 'libhts2' in '../libhts2_1.9-12~deb10u1_amd64.deb'. dpkg-deb: building package 'libhts2-dbgsym' in '../libhts2-dbgsym_1.9-12~deb10u1_amd64.deb'. dpkg-deb: building package 'libhts-private-dev' in '../libhts-private-dev_1.9-12~deb10u1_all.deb'. -dpkg-deb: building package 'htslib-test' in '../htslib-test_1.9-12~deb10u1_all.deb'. -dpkg-deb: building package 'libhts-dev' in '../libhts-dev_1.9-12~deb10u1_amd64.deb'. dpkg-deb: building package 'tabix-dbgsym' in '../tabix-dbgsym_1.9-12~deb10u1_amd64.deb'. -dpkg-deb: building package 'tabix' in '../tabix_1.9-12~deb10u1_amd64.deb'. +dpkg-deb: building package 'libhts-dev' in '../libhts-dev_1.9-12~deb10u1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../htslib_1.9-12~deb10u1_amd64.changes dpkg-genchanges: warning: the current version (1.9-12~deb10u1) is earlier than the previous one (1.9-12) @@ -3173,12 +3208,14 @@ dpkg-genchanges: warning: the current version (1.9-12~deb10u1) is earlier than the previous one (1.9-12) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2761452/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/599709 and its subdirectories -I: Current time: Sat Nov 12 03:06:54 -12 2022 -I: pbuilder-time-stamp: 1668265614 +I: removing directory /srv/workspace/pbuilder/2761452 and its subdirectories +I: Current time: Sun Oct 10 22:51:51 +14 2021 +I: pbuilder-time-stamp: 1633855911