Diff of the two buildlogs: -- --- b1/build.log 2021-12-05 22:51:20.940211658 +0000 +++ b2/build.log 2021-12-05 23:01:27.271455768 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jan 7 17:09:45 -12 2023 -I: pbuilder-time-stamp: 1673154585 +I: Current time: Mon Dec 6 12:51:23 +14 2021 +I: pbuilder-time-stamp: 1638744683 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Sun May 26 08:33:48 2019 -12 +gpgv: Signature made Mon May 27 10:33:48 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key @@ -31,136 +31,170 @@ dpkg-source: info: applying doxygen_update.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4176637/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='f30d23c64cad460cb77bb95fd146e6b2' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4176637' - PS1='# ' - PS2='> ' + INVOCATION_ID=3c2519f9292a45a8b3afa71a6fb47091 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2341683 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.LfKs0yIA0S/pbuilderrc_bZkO --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.LfKs0yIA0S/b1 --logfile b1/build.log libhmsbeagle_3.1.2+dfsg-6.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.LfKs0yIA0S/pbuilderrc_9pVZ --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.LfKs0yIA0S/b2 --logfile b2/build.log libhmsbeagle_3.1.2+dfsg-6.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 10 16:21 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/4176637/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Dec 6 12:51 sh -> bash + lrwxrwxrwx 1 root root 4 Nov 8 11:58 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -461,7 +495,7 @@ Get: 239 http://deb.debian.org/debian buster/main amd64 opencl-c-headers all 2.2~2019.01.17-g49f07d3-1 [31.3 kB] Get: 240 http://deb.debian.org/debian buster/main amd64 ocl-icd-opencl-dev amd64 2.2.12-2 [10.7 kB] Get: 241 http://deb.debian.org/debian buster/main amd64 pocl-opencl-icd amd64 1.2-5 [18.2 kB] -Fetched 396 MB in 6s (71.0 MB/s) +Fetched 396 MB in 14s (27.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -1637,7 +1671,8 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libhmsbeagle-3.1.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libhmsbeagle_3.1.2+dfsg-6_source.changes +hostname: Name or service not known +I: Running cd /build/libhmsbeagle-3.1.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libhmsbeagle_3.1.2+dfsg-6_source.changes dpkg-buildpackage: info: source package libhmsbeagle dpkg-buildpackage: info: source version 3.1.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable @@ -1816,7 +1851,7 @@ checking for /usr/local/cuda/lib... no checking for x86 cpuid 0x00000000 output... d:68747541:444d4163:69746e65 checking for x86 cpuid 0x80000000 output... 8000001a:68747541:444d4163:69746e65 -checking for x86 cpuid 0x00000001 output... 600f12:5000800:9eb82203:78bfbff +checking for x86 cpuid 0x00000001 output... 600f12:8000800:9eb82203:78bfbff checking for x86 cpuid 0x00000007 output... 0:0:0:0 checking for x86 cpuid 0x80000001 output... 600f12:0:10be7:2dd3fbff checking for x86-AVX xgetbv 0x00000000 output... 7:0 @@ -1980,10 +2015,10 @@ make[7]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels' make[6]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels' make[6]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU' -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUImplHelper.lo `test -f 'GPUImplHelper.cpp' || echo './'`GPUImplHelper.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUImplHelper.lo `test -f 'GPUImplHelper.cpp' || echo './'`GPUImplHelper.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -o libhmsbeagle_opencl_la-GPUImplHelper.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo `test -f 'GPUInterfaceOpenCL.cpp' || echo './'`GPUInterfaceOpenCL.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo `test -f 'GPUInterfaceOpenCL.cpp' || echo './'`GPUInterfaceOpenCL.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o In file included from /usr/include/CL/cl.h:32, from /usr/include/CL/opencl.h:38, @@ -1993,7 +2028,7 @@ #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelLauncher.lo `test -f 'KernelLauncher.cpp' || echo './'`KernelLauncher.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelLauncher.lo `test -f 'KernelLauncher.cpp' || echo './'`KernelLauncher.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelLauncher.o In file included from /usr/include/CL/cl.h:32, from /usr/include/CL/opencl.h:38, @@ -2004,10 +2039,10 @@ #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -o libhmsbeagle_opencl_la-KernelLauncher.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelResource.lo `test -f 'KernelResource.cpp' || echo './'`KernelResource.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelResource.lo `test -f 'KernelResource.cpp' || echo './'`KernelResource.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelResource.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -o libhmsbeagle_opencl_la-KernelResource.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-OpenCLPlugin.lo `test -f 'OpenCLPlugin.cpp' || echo './'`OpenCLPlugin.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-OpenCLPlugin.lo `test -f 'OpenCLPlugin.cpp' || echo './'`OpenCLPlugin.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o In file included from /usr/include/CL/cl.h:32, from /usr/include/CL/opencl.h:38, @@ -2018,7 +2053,7 @@ #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)") ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -o libhmsbeagle_opencl_la-OpenCLPlugin.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-opencl.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_opencl_la-GPUImplHelper.lo libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo libhmsbeagle_opencl_la-KernelLauncher.lo libhmsbeagle_opencl_la-KernelResource.lo libhmsbeagle_opencl_la-OpenCLPlugin.lo -lOpenCL -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-opencl.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_opencl_la-GPUImplHelper.lo libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo libhmsbeagle_opencl_la-KernelLauncher.lo libhmsbeagle_opencl_la-KernelResource.lo libhmsbeagle_opencl_la-OpenCLPlugin.lo -lOpenCL -ldl libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o .libs/libhmsbeagle_opencl_la-KernelLauncher.o .libs/libhmsbeagle_opencl_la-KernelResource.o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o -lOpenCL -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-opencl.so.31 -o .libs/libhmsbeagle-opencl.so.31.0.0 libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so.31" && ln -s "libhmsbeagle-opencl.so.31.0.0" "libhmsbeagle-opencl.so.31") libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so" && ln -s "libhmsbeagle-opencl.so.31.0.0" "libhmsbeagle-opencl.so") @@ -2030,10 +2065,10 @@ make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU' Making all in CPU make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU' -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_la-BeagleCPUPlugin.lo `test -f 'BeagleCPUPlugin.cpp' || echo './'`BeagleCPUPlugin.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_la-BeagleCPUPlugin.lo `test -f 'BeagleCPUPlugin.cpp' || echo './'`BeagleCPUPlugin.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -o libhmsbeagle_cpu_la-BeagleCPUPlugin.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_cpu_la-BeagleCPUPlugin.lo -lpthread -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -pthread -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_cpu_la-BeagleCPUPlugin.lo -lpthread -ldl libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o -lpthread -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -pthread -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libhmsbeagle-cpu.so.31 -o .libs/libhmsbeagle-cpu.so.31.0.0 libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so.31" && ln -s "libhmsbeagle-cpu.so.31.0.0" "libhmsbeagle-cpu.so.31") libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so" && ln -s "libhmsbeagle-cpu.so.31.0.0" "libhmsbeagle-cpu.so") @@ -2041,10 +2076,10 @@ ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libhmsbeagle-cpu.a libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-cpu.la" && ln -s "../libhmsbeagle-cpu.la" "libhmsbeagle-cpu.la" ) -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.lo `test -f 'BeagleCPUSSEPlugin.cpp' || echo './'`BeagleCPUSSEPlugin.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.lo `test -f 'BeagleCPUSSEPlugin.cpp' || echo './'`BeagleCPUSSEPlugin.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUSSEPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/build/libhmsbeagle-3.1.2+dfsg -I/build/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUSSEPlugin.cpp -o libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu-sse.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.lo -lpthread -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -pthread -msse2 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu-sse.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.lo -lpthread -ldl libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_cpu_sse_la-BeagleCPUSSEPlugin.o -lpthread -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -pthread -msse2 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libhmsbeagle-cpu-sse.so.31 -o .libs/libhmsbeagle-cpu-sse.so.31.0.0 libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu-sse.so.31" && ln -s "libhmsbeagle-cpu-sse.so.31.0.0" "libhmsbeagle-cpu-sse.so.31") libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu-sse.so" && ln -s "libhmsbeagle-cpu-sse.so.31.0.0" "libhmsbeagle-cpu-sse.so") @@ -2055,13 +2090,13 @@ make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU' Making all in plugin make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin' -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-Plugin.lo `test -f 'Plugin.cpp' || echo './'`Plugin.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-Plugin.lo `test -f 'Plugin.cpp' || echo './'`Plugin.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -fPIC -DPIC -o .libs/libplugin_la-Plugin.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -o libplugin_la-Plugin.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-UnixSharedLibrary.lo `test -f 'UnixSharedLibrary.cpp' || echo './'`UnixSharedLibrary.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-UnixSharedLibrary.lo `test -f 'UnixSharedLibrary.cpp' || echo './'`UnixSharedLibrary.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -fPIC -DPIC -o .libs/libplugin_la-UnixSharedLibrary.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -o libplugin_la-UnixSharedLibrary.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libplugin.la libplugin_la-Plugin.lo libplugin_la-UnixSharedLibrary.lo -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libplugin.la libplugin_la-Plugin.lo libplugin_la-UnixSharedLibrary.lo -ldl libtool: link: ar cru .libs/libplugin.a .libs/libplugin_la-Plugin.o .libs/libplugin_la-UnixSharedLibrary.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libplugin.a @@ -2069,23 +2104,23 @@ make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin' Making all in benchmark make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark' -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-BeagleBenchmark.lo `test -f 'BeagleBenchmark.cpp' || echo './'`BeagleBenchmark.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-BeagleBenchmark.lo `test -f 'BeagleBenchmark.cpp' || echo './'`BeagleBenchmark.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleBenchmark.cpp -fPIC -DPIC -o .libs/libbenchmark_la-BeagleBenchmark.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleBenchmark.cpp -o libbenchmark_la-BeagleBenchmark.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-linalg.lo `test -f 'linalg.cpp' || echo './'`linalg.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-linalg.lo `test -f 'linalg.cpp' || echo './'`linalg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c linalg.cpp -fPIC -DPIC -o .libs/libbenchmark_la-linalg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c linalg.cpp -o libbenchmark_la-linalg.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbenchmark.la libbenchmark_la-BeagleBenchmark.lo libbenchmark_la-linalg.lo -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbenchmark.la libbenchmark_la-BeagleBenchmark.lo libbenchmark_la-linalg.lo -ldl libtool: link: ar cru .libs/libbenchmark.a .libs/libbenchmark_la-BeagleBenchmark.o .libs/libbenchmark_la-linalg.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libbenchmark.a libtool: link: ( cd ".libs" && rm -f "libbenchmark.la" && ln -s "../libbenchmark.la" "libbenchmark.la" ) make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark' make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle' -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_la-beagle.lo `test -f 'beagle.cpp' || echo './'`beagle.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_la-beagle.lo `test -f 'beagle.cpp' || echo './'`beagle.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -fPIC -DPIC -o .libs/libhmsbeagle_la-beagle.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -o libhmsbeagle_la-beagle.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 4:2:3 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_la-beagle.lo plugin/libplugin.la benchmark/libbenchmark.la -lpthread -ldl +/bin/sh ../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 4:2:3 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_la-beagle.lo plugin/libplugin.la benchmark/libbenchmark.la -lpthread -ldl libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_la-beagle.o -Wl,--whole-archive plugin/.libs/libplugin.a benchmark/.libs/libbenchmark.a -Wl,--no-whole-archive -lpthread -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle.so.1 -o .libs/libhmsbeagle.so.1.3.2 libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so.1" && ln -s "libhmsbeagle.so.1.3.2" "libhmsbeagle.so.1") libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so" && ln -s "libhmsbeagle.so.1.3.2" "libhmsbeagle.so") @@ -2101,10 +2136,10 @@ make[3]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle' Making all in libhmsbeagle/JNI make[3]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI' -/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo `test -f 'beagle_BeagleJNIWrapper.cpp' || echo './'`beagle_BeagleJNIWrapper.cpp +/bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo `test -f 'beagle_BeagleJNIWrapper.cpp' || echo './'`beagle_BeagleJNIWrapper.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o >/dev/null 2>&1 -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -Wl,-rpath -Wl,/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/.libs -L../../libhmsbeagle /build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/.libs/libhmsbeagle.so -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so libtool: link: ar cru .libs/libhmsbeagle-jni.a libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o ar: `u' modifier ignored since `D' is the default (see `U') @@ -2286,7 +2321,7 @@ [jar] Building jar: /build/libhmsbeagle-3.1.2+dfsg/lib/beagle.jar BUILD SUCCESSFUL -Total time: 1 second +Total time: 6 seconds make[1]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg' @@ -2341,7 +2376,7 @@ make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/examples/synthetictest' g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o synthetictest.o synthetictest.cpp g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o linalg.o linalg.cpp -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o synthetictest synthetictest.o linalg.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o synthetictest synthetictest.o linalg.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/synthetictest synthetictest.o linalg.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl echo './synthetictest' > synthetictest.sh echo './synthetictest --states 64 --sites 100 --taxa 10' >> synthetictest.sh @@ -2370,7 +2405,7 @@ make tinytest make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/examples/tinytest' g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o tinytest.o tinytest.cpp -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o tinytest tinytest.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o tinytest tinytest.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tinytest tinytest.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/examples/tinytest' make check-TESTS @@ -2400,7 +2435,7 @@ oddstatetest.cpp:444:36: warning: passing NULL to non-pointer argument 1 of ‘void runBeagle(int, int, int, int, bool, bool, int)’ [-Wconversion-null] rateCategoryCount); ^ -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o oddstatetest oddstatetest.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o oddstatetest oddstatetest.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/oddstatetest oddstatetest.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest' make check-TESTS @@ -2426,7 +2461,7 @@ make complextest make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/examples/complextest' g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o complextest.o complextest.cpp -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o complextest complextest.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o complextest complextest.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/complextest complextest.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/examples/complextest' make check-TESTS @@ -2452,7 +2487,7 @@ make fourtaxon fourtaxonrun.sh make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon' g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fourtaxon.o fourtaxon.cpp -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o fourtaxon fourtaxon.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o fourtaxon fourtaxon.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fourtaxon fourtaxon.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl echo './fourtaxon --niters 4 --filename ./fourtaxon.dat' > fourtaxonrun.sh chmod +x fourtaxonrun.sh @@ -2480,7 +2515,7 @@ make matrixtest make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/examples/matrixtest' g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-amd64/include -I/usr/lib/jvm/java-11-openjdk-amd64/include/linux -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o matrixtest.o matrixtest.cpp -/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o matrixtest matrixtest.o ../../libhmsbeagle/libhmsbeagle.la -ldl +/bin/sh ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o matrixtest matrixtest.o ../../libhmsbeagle/libhmsbeagle.la -ldl libtool: link: g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/matrixtest matrixtest.o ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl make[5]: Leaving directory '/build/libhmsbeagle-3.1.2+dfsg/examples/matrixtest' make check-TESTS @@ -2569,7 +2604,7 @@ make[4]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU' make[5]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU' /bin/mkdir -p '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-opencl.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-opencl.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.so.31.0.0 /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libhmsbeagle-opencl.so.31.0.0 libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so.31 || { rm -f libhmsbeagle-opencl.so.31 && ln -s libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so.31; }; }) libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so || { rm -f libhmsbeagle-opencl.so && ln -s libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so; }; }) @@ -2586,7 +2621,7 @@ make[3]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU' make[4]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU' /bin/mkdir -p '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-cpu.la libhmsbeagle-cpu-sse.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-cpu.la libhmsbeagle-cpu-sse.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.so.31.0.0 /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu.so.31.0.0 libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so.31 || { rm -f libhmsbeagle-cpu.so.31 && ln -s libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so.31; }; }) libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so || { rm -f libhmsbeagle-cpu.so && ln -s libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so; }; }) @@ -2622,7 +2657,7 @@ make[3]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle' make[4]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle' /bin/mkdir -p '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ../libtool --mode=install /usr/bin/install -c libhmsbeagle.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ../libtool --mode=install /usr/bin/install -c libhmsbeagle.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libhmsbeagle.so.1.3.2 /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libhmsbeagle.so.1.3.2 libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle.so.1.3.2 libhmsbeagle.so.1 || { rm -f libhmsbeagle.so.1 && ln -s libhmsbeagle.so.1.3.2 libhmsbeagle.so.1; }; }) libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhmsbeagle.so.1.3.2 libhmsbeagle.so || { rm -f libhmsbeagle.so && ln -s libhmsbeagle.so.1.3.2 libhmsbeagle.so; }; }) @@ -2640,9 +2675,9 @@ make[2]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI' make[3]: Entering directory '/build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI' /bin/mkdir -p '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-jni.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-jni.la '/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: warning: relinking 'libhmsbeagle-jni.la' -libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI; /bin/bash "/build/libhmsbeagle-3.1.2+dfsg/libtool" --tag CXX --mode=relink g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl -inst-prefix-dir /build/libhmsbeagle-3.1.2+dfsg/debian/tmp) +libtool: install: (cd /build/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI; /bin/sh "/build/libhmsbeagle-3.1.2+dfsg/libtool" --tag CXX --mode=relink g++ -O3 -std=c++11 -g -O2 -ffile-prefix-map=/build/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/x86_64-linux-gnu libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl -inst-prefix-dir /build/libhmsbeagle-3.1.2+dfsg/debian/tmp) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/8/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -L../../libhmsbeagle -L/build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lhmsbeagle -ldl -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/8/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.soT /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libhmsbeagle-jni.so libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.lai /build/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libhmsbeagle-jni.la @@ -2756,30 +2791,30 @@ install -p -m0644 ./doc/man/man3/BeagleOperationByPartition.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3 install -p -m0644 ./doc/man/man3/BeagleResource.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 install -p -m0644 ./doc/man/man3/BeagleResourceList.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 - man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new + man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new + man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new + man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3.dh-new - man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new - man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3.dh-new man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 > debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new - mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 - chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 - mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 - chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 - mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 - chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 - mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 - chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3 chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3 + mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 + chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3 chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3 - mv debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 - chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3 chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3 + mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 + chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 + mv debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 + chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 + mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 + chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 + mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 + chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 dh_perl rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log debian/rules override_dh_link @@ -2855,64 +2890,64 @@ Adding substvars: java:Depends= java:Recommends= dh_strip_nondeterminism Using 1558901197 as canonical time - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_s.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_h.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_b.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_a.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_off.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_benchmarked_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/splitbar.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/open.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_h.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_g.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_f.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/graph_legend.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_benchmarked_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderopen.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderclosed.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doxygen.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doc.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/closed.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle_8h__incl.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doxygen.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doc.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_h.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_g.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/mag_sel.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/close.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle-dox.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bdwn.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bc_s.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_r.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_m.png using File::StripNondeterminism::handlers::png Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_l.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/mag_sel.png using File::StripNondeterminism::handlers::png - Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/close.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bc_s.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_r.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_f.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/graph_legend.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_s.png using File::StripNondeterminism::handlers::png + Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_h.png using File::StripNondeterminism::handlers::png Using 1558901197 as canonical time Normalizing debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar using File::StripNondeterminism::handlers::jar dh_compress cd debian/libhmsbeagle-dev - cd debian/libhmsbeagle1v5 cd debian/libhmsbeagle-java - chmod a-x usr/share/doc/libhmsbeagle1v5/changelog.Debian + cd debian/libhmsbeagle1v5 chmod a-x usr/share/doc/libhmsbeagle-java/changelog.Debian - gzip -9nf usr/share/doc/libhmsbeagle1v5/changelog.Debian gzip -9nf usr/share/doc/libhmsbeagle-java/changelog.Debian + chmod a-x usr/share/doc/libhmsbeagle1v5/changelog.Debian + gzip -9nf usr/share/doc/libhmsbeagle1v5/changelog.Debian cd '/build/libhmsbeagle-3.1.2+dfsg' cd '/build/libhmsbeagle-3.1.2+dfsg' chmod a-x usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleBenchmarkedResource.3 usr/share/man/man3/BeagleBenchmarkedResourceList.3 usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleOperationByPartition.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3 gzip -9nf usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleBenchmarkedResource.3 usr/share/man/man3/BeagleBenchmarkedResourceList.3 usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleOperationByPartition.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3 cd '/build/libhmsbeagle-3.1.2+dfsg' dh_fixperms - find debian/libhmsbeagle-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhmsbeagle1v5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhmsbeagle-java -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 + find debian/libhmsbeagle-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libhmsbeagle-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhmsbeagle1v5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/libhmsbeagle-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhmsbeagle-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhmsbeagle1v5/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle1v5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhmsbeagle-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/libhmsbeagle1v5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhmsbeagle-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/libhmsbeagle-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/libhmsbeagle1v5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhmsbeagle1v5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhmsbeagle1v5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/libhmsbeagle-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/libhmsbeagle-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhmsbeagle-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhmsbeagle-dev/usr/share/man debian/libhmsbeagle-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhmsbeagle-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 @@ -2942,9 +2977,6 @@ dh_strip install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle.so.1.3.2 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/58/0862884128ed051feb39111404983dad08c63a.debug - strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle.a - strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu.a - strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu-sse.a chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/58/0862884128ed051feb39111404983dad08c63a.debug chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/58/0862884128ed051feb39111404983dad08c63a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle.so.1.3.2 @@ -2969,9 +3001,12 @@ objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/9d/7beb13fe00526d3b8d459f92b9c7e0c6fbbba4.debug debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu.so.31.0.0 install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu-sse.so.31.0.0 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/82/a5a40cd91430f393555d89bfce314518dd5cb5.debug + strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle.a + strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu.a chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/82/a5a40cd91430f393555d89bfce314518dd5cb5.debug chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/82/a5a40cd91430f393555d89bfce314518dd5cb5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu-sse.so.31.0.0 + strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu-sse.a objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/82/a5a40cd91430f393555d89bfce314518dd5cb5.debug debian/libhmsbeagle1v5/usr/lib/x86_64-linux-gnu/libhmsbeagle-cpu-sse.so.31.0.0 install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libhmsbeagle1v5/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.dwz @@ -3008,39 +3043,39 @@ echo misc:Pre-Depends= >> debian/libhmsbeagle1v5.substvars install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/.debhelper/libhmsbeagle1v5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libhmsbeagle1v5-dbgsym "-DDepends=libhmsbeagle1v5 (= \${binary:Version})" "-DDescription=debug symbols for libhmsbeagle1v5" "-DBuild-Ids=580862884128ed051feb39111404983dad08c63a 82a5a40cd91430f393555d89bfce314518dd5cb5 9d7beb13fe00526d3b8d459f92b9c7e0c6fbbba4 b9914eb0654dbb3909e16789dbfa19ec5fcef220 c2694421d20ffc7f363749a9d79e54df17b1105a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks - chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control - chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control - dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/libhmsbeagle1v5 -UMulti-Arch dpkg-gencontrol: warning: Depends field of package libhmsbeagle-dev: substitution variable ${shlibs:Depends} used, but is not defined + chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/control + chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/control dpkg-gencontrol: warning: Depends field of package libhmsbeagle-java: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/control chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/control - chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/control - chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/control + chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control + chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control + dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/libhmsbeagle1v5 -UMulti-Arch chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/control chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/control dh_md5sums cd debian/libhmsbeagle-java >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/libhmsbeagle-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libhmsbeagle1v5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/md5sums chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/md5sums - chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/md5sums - chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/md5sums chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/md5sums chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/md5sums + cd debian/libhmsbeagle-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/md5sums + chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/md5sums cd debian/.debhelper/libhmsbeagle1v5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums dh_builddeb - dpkg-deb --build debian/libhmsbeagle-dev .. - dpkg-deb --build debian/libhmsbeagle1v5 .. dpkg-deb --build debian/.debhelper/libhmsbeagle1v5/dbgsym-root .. + dpkg-deb --build debian/libhmsbeagle1v5 .. + dpkg-deb --build debian/libhmsbeagle-dev .. dpkg-deb --build debian/libhmsbeagle-java .. dpkg-deb: building package 'libhmsbeagle-dev' in '../libhmsbeagle-dev_3.1.2+dfsg-6_amd64.deb'. dpkg-deb: building package 'libhmsbeagle1v5-dbgsym' in '../libhmsbeagle1v5-dbgsym_3.1.2+dfsg-6_amd64.deb'. -dpkg-deb: building package 'libhmsbeagle1v5' in '../libhmsbeagle1v5_3.1.2+dfsg-6_amd64.deb'. dpkg-deb: building package 'libhmsbeagle-java' in '../libhmsbeagle-java_3.1.2+dfsg-6_amd64.deb'. +dpkg-deb: building package 'libhmsbeagle1v5' in '../libhmsbeagle1v5_3.1.2+dfsg-6_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libhmsbeagle_3.1.2+dfsg-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3048,12 +3083,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2341683/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4176637 and its subdirectories -I: Current time: Sat Jan 7 17:14:26 -12 2023 -I: pbuilder-time-stamp: 1673154866 +I: removing directory /srv/workspace/pbuilder/2341683 and its subdirectories +I: Current time: Mon Dec 6 13:01:26 +14 2021 +I: pbuilder-time-stamp: 1638745286