Diff of the two buildlogs: -- --- b1/build.log 2020-12-11 00:50:29.467426647 +0000 +++ b2/build.log 2020-12-11 00:52:19.988007609 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jan 12 19:12:08 -12 2022 -I: pbuilder-time-stamp: 1642057928 +I: Current time: Fri Dec 11 14:50:31 +14 2020 +I: pbuilder-time-stamp: 1607647831 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Thu Aug 30 04:54:41 2018 -12 +gpgv: Signature made Fri Aug 31 06:54:41 2018 +14 gpgv: using RSA key 2ED459C30E8DB8A8D93CA77A97F2D4FCA09F304E gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libminc_2.4.03-2.dsc @@ -33,136 +33,170 @@ dpkg-source: info: applying disable-dimension-test.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/25129/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='570b1c57401b4ea6ba024c9d05ad0b8e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='25129' - PS1='# ' - PS2='> ' + INVOCATION_ID=abdb526a9f524306b0d1ebe3585ab366 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=27245 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.E9ScFjwzrc/pbuilderrc_I5Tu --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.E9ScFjwzrc/b1 --logfile b1/build.log libminc_2.4.03-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.E9ScFjwzrc/pbuilderrc_1aHZ --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.E9ScFjwzrc/b2 --logfile b2/build.log libminc_2.4.03-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos15-amd64 5.9.0-0.bpo.2-amd64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) x86_64 GNU/Linux + Linux i-capture-the-hostname 4.19.0-13-amd64 #1 SMP Debian 4.19.160-2 (2020-11-28) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jan 9 02:47 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/25129/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Dec 11 14:50 sh -> bash + lrwxrwxrwx 1 root root 4 Dec 7 22:26 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -287,7 +321,7 @@ Get: 75 http://deb.debian.org/debian buster/main amd64 libnetcdf-dev amd64 1:4.6.2-1 [82.7 kB] Get: 76 http://deb.debian.org/debian buster/main amd64 libnifti2 amd64 2.0.0-3 [105 kB] Get: 77 http://deb.debian.org/debian buster/main amd64 libnifti-dev amd64 2.0.0-3 [136 kB] -Fetched 35.3 MB in 0s (71.7 MB/s) +Fetched 35.3 MB in 1s (34.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -620,7 +654,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-2 dpkg-buildpackage: info: source distribution unstable @@ -756,7 +790,7 @@ -- Build files have been written to: /build/libminc-2.4.03/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/libminc-2.4.03' dh_auto_build - cd obj-x86_64-linux-gnu && make -j16 + cd obj-x86_64-linux-gnu && make -j15 make[1]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/progress.marks @@ -765,49 +799,139 @@ make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= Scanning dependencies of target minc2_static +Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build -Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o +[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o [ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o -[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o +[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat 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CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -[ 6%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -[ 6%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + return (tmp); + ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + result = H5Tget_member_value(volume->mtype_id,idx,value); + ^~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + buffer = malloc(n * sizeof(double)); + ^ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': +/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(ndims, buffer, icount, H5Tget_size(type_id), + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': +/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = volume->number_of_dims; + ^~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + mspc_id = H5Screate_simple(ndims, hdf_count, NULL); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + slice_ndims = ndims; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + for (i = slice_ndims; i < ndims; i++ ) { + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + imap[volume->dim_indices[i]] = i; + ^ +/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': +/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = volume->number_of_dims; + ^~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/hyper.c:16: +/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); + ^~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' + #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} + ^~~ +/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + slice_ndims = ndims; + ^~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + for (i = slice_ndims; i < ndims; i++ ) { + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + imap[volume->dim_indices[i]] = i; + ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", @@ -841,37 +965,21 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] data->frame_ptr->grp_idx - 1, ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': /build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( data->name_ptr, attr_name, data->name_len ); ~~~~^~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - *name = H5Tget_member_name(volume->ftype_id, index); - ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - offset = index * H5Tget_size(ftype_id); - ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': /build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); ^~~~~~~ -/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': -/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy(buffer, tmp, maxlen); - ^~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( path, data->frame_ptr->relpath, maxpath ); ^~~~~~~ /build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] strncpy ( data->frame_ptr->relpath, tmp, maxpath ); ^~~~~~~ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - return (tmp); - ^ /build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] slength = strlen ( path ) - ( pch - path ); @@ -879,73 +987,68 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] std_name[i] = path[pch - path + 1 + i]; ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - result = H5Tget_member_value(volume->mtype_id,idx,value); - ^~~ -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - handle->edge_lengths[i] = dims[i]; - ^~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + number_of_dims = volume->number_of_dims; + ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + max_dims = array_length; + ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + offsets[j] = dimension->start + ( i * dimension->step ); ^ -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - ^~~~~~~ -/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - handle->zlib_level = cd_values[0]; - ^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - ^~~~~ -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = H5Sget_simple_extent_ndims ( fspc_id ); - ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - x1 = x; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - osize[i] = isize[i] / scale; - ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': +/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", + ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( fullpath, MI_ROOT_PATH "/" , length ); + ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); + ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncat(fullpath, "/", length - strlen(fullpath) - 1); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncat(fullpath, path, length - strlen(fullpath) - 1); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': +/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); + ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncat(fullpath, "/", length - strlen(fullpath) - 1); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncat(fullpath, path, length - strlen(fullpath) - 1); + ^ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] restructure_array(ndims, buffer, icount, H5Tget_size(type_id), @@ -953,45 +1056,44 @@ /build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = slice * scale; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': /build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] ndims = volume->number_of_dims; ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': +/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + data->frame_ptr->grp_idx ); + ~~~~~~~~~~~~~~~^~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] mspc_id = H5Screate_simple(ndims, hdf_count, NULL); ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); ^~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + data->frame_ptr->grp_idx - 1, + ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] slice_ndims = ndims; ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] for (i = slice_ndims; i < ndims; i++ ) { ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': +/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( data->name_ptr, attr_name, data->name_len ); + ~~~~^~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( path, data->frame_ptr->relpath, maxpath ); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( path, data->frame_ptr->relpath, maxpath ); + ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy ( data->frame_ptr->relpath, tmp, maxpath ); + ^~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] imap[volume->dim_indices[i]] = i; ^ @@ -1020,40 +1122,24 @@ /build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] for (i = slice_ndims; i < ndims; i++ ) { ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + *name = H5Tget_member_name(volume->ftype_id, index); + ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] imap[volume->dim_indices[i]] = i; ^ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - ^~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - ^~~~~ -[ 8%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - buffer = malloc(n * sizeof(double)); - ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': -/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fopen(path, mode, prp_id); - ^~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': -/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - ^~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + offset = index * H5Tget_size(ftype_id); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': +/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + slength = strlen ( path ) - ( pch - path ); + ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + std_name[i] = path[pch - path + 1 + i]; + ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] number_of_dims = volume->number_of_dims; @@ -1069,6 +1155,136 @@ /build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + offsets[j] = dimension->start + ( i * dimension->step ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + x1 = x; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + osize[i] = isize[i] / scale; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = slice * scale; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + ^ +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c +[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c +[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = H5Sget_simple_extent_ndims ( fspc_id ); + ^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + handle->edge_lengths[i] = dims[i]; + ^~~~ +/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + handle->zlib_level = cd_values[0]; + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); + ^ +[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + return (tmp); + ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + result = H5Tget_member_value(volume->mtype_id,idx,value); + ^~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': +/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fopen(path, mode, prp_id); + ^~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': +/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + ^~~~~ In file included from /usr/include/hdf5/serial/hdf5.h:34, from /build/libminc-2.4.03/libsrc2/volume.c:8: /build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': @@ -1092,24 +1308,9 @@ /build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} ^~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - offsets[j] = dimension->start + ( i * dimension->step ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, from /build/libminc-2.4.03/libsrc2/minc2.h:11, from /build/libminc-2.4.03/libsrc2/volume.c:32: @@ -1119,15 +1320,10 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ /build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); ^ +[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] hdim->offsets = malloc(n_points * sizeof(double)); @@ -1153,6 +1349,7 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c In file included from /usr/include/hdf5/serial/hdf5.h:27, from /build/libminc-2.4.03/libsrc2/volume.c:8: /build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': @@ -1189,16 +1386,113 @@ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); ^ -[ 8%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + x1 = x; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + y1 = y + ( j * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + z1 = z + ( k * scale ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + r = miget_slice_range ( volume, pos, volume->number_of_dims, + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + osize[i] = isize[i] / scale; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = slice * scale; + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + count[0] = scale; + ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + ^ +/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': +/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy(buffer, tmp, maxlen); + ^~~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + *name = H5Tget_member_name(volume->ftype_id, index); + ^~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + offset = index * H5Tget_size(ftype_id); + ^ +[ 11%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o +[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -[ 9%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o +[ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c -[ 9%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +[ 13%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~ +/build/libminc-2.4.03/libsrc2/volume.c:101:21: + host_str, + ~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument +In file included from /usr/include/stdio.h:873, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 + return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o +[ 15%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': +/build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; + ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + ParseLong(argv[srcIndex], &endPtr); + ^~~~~~~~~ /build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] offset_next = -1; /* Initialize. */ @@ -1209,12 +1503,23 @@ /build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' BIT_SET(bitmap, offset_start); ^~~~~~~ +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) ^ /build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' BIT_SET(bitmap, offset_next); ^~~~~~~ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + numSpaces = width + 1 - strlen(infoPtr->key); + ^~~~~ +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + ndims = H5Sget_simple_extent_ndims ( fspc_id ); + ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] files = malloc(sizeof(*files) * array_size); @@ -1222,7 +1527,160 @@ /build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] files = realloc(files, sizeof(*files) * array_size); ^ -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + handle->edge_lengths[i] = dims[i]; + ^~~~ +/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + ^ +/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + handle->zlib_level = cd_values[0]; + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); + ^ +[ 15%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': +/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fopen(path, mode, prp_id); + ^~~~ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': +/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + ^~~~~ +In file included from /usr/include/hdf5/serial/hdf5.h:34, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/usr/include/hdf5/serial/H5Ppublic.h:44:31: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5OPEN H5open(), +/usr/include/hdf5/serial/H5Fpublic.h:52:32: note: in expansion of macro 'H5OPEN' + #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ + ^~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:584:35: note: in expansion of macro 'H5F_ACC_TRUNC' + file_id = _hdf_create(filename, H5F_ACC_TRUNC); + ^~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + hdf_size[i] = create_props->edge_lengths[i]; + ^~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") + ~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' + #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} + ^~~ +/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * + ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); + ^ +/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': +/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + hdim->offsets = malloc(n_points * sizeof(double)); + ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + hdim->widths = malloc(n_points * sizeof(double)); + ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/hdf5.h:27, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': +/usr/include/hdf5/serial/H5Fpublic.h:50:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */ + ^ +/build/libminc-2.4.03/libsrc2/volume.c:1347:16: note: in expansion of macro 'H5F_ACC_RDONLY' + hdf_mode = H5F_ACC_RDONLY; + ^~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ + ^ +/build/libminc-2.4.03/libsrc2/volume.c:1349:16: note: in expansion of macro 'H5F_ACC_RDWR' + hdf_mode = H5F_ACC_RDWR; + ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * + ^ +In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, + from /build/libminc-2.4.03/libsrc2/minc2.h:11, + from /build/libminc-2.4.03/libsrc2/volume.c:32: +/build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); + ^ +/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); + ^ +/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); + ^ +/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); + ^ +[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c +[ 16%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o +[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o +[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +[ 18%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c +[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o +[ 19%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o +/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + strncpy(buffer, tmp, maxlen); + ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': /build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; @@ -1230,7 +1688,6 @@ /build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] ParseLong(argv[srcIndex], &endPtr); ^~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] numSpaces = width + 1 - strlen(infoPtr->key); @@ -1238,22 +1695,13 @@ /build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] numSpaces = width + 1 - strlen(infoPtr->key); ^~~~~ -[ 11%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c -[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = malloc(sizeof(*files) * array_size); + ^ +/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + files = realloc(files, sizeof(*files) * array_size); + ^ /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] icvp->user_do_range = value; @@ -1530,81 +1978,13 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~ -/build/libminc-2.4.03/libsrc2/volume.c:101:21: - host_str, - ~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument -In file included from /usr/include/stdio.h:873, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 - return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': -/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", - ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( fullpath, MI_ROOT_PATH "/" , length ); - ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); - ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncat(fullpath, "/", length - strlen(fullpath) - 1); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncat(fullpath, path, length - strlen(fullpath) - 1); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': -/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); - ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncat(fullpath, "/", length - strlen(fullpath) - 1); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncat(fullpath, path, length - strlen(fullpath) - 1); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': -/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - data->frame_ptr->grp_idx ); - ~~~~~~~~~~~~~~~^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - data->frame_ptr->grp_idx - 1, - ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': -/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( data->name_ptr, attr_name, data->name_len ); - ~~~~^~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( path, data->frame_ptr->relpath, maxpath ); - ^~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( path, data->frame_ptr->relpath, maxpath ); - ^~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] fval[0] = valid_range[0]; ^~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] fval[1] = valid_range[1]; ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy ( data->frame_ptr->relpath, tmp, maxpath ); - ^~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miattput_pointer': /build/libminc-2.4.03/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); @@ -1638,57 +2018,38 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] child_list_size -= strlen(MI_CHILD_SEPARATOR); ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - number_of_dims = volume->number_of_dims; - ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - max_dims = array_length; - ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - slength = strlen ( path ) - ( pch - path ); - ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - std_name[i] = path[pch - path + 1 + i]; - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ +[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o +[ 20%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miappend_history': /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] att_val = malloc(att_len + strlen(tm_stamp) + 2); ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - ^ -[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - offsets[j] = dimension->start + ( i * dimension->step ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c -[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +[ 20%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o +/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': +/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~ +/build/libminc-2.4.03/libsrc2/volume.c:101:21: + host_str, + ~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument + result = snprintf(id_str, length, "%s:%s:%s:%u:%u", + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument +In file included from /usr/include/stdio.h:873, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 + return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -1719,6 +2080,28 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] strlen(value) + 1, value); ~~~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] + offset_next = -1; /* Initialize. */ + ^ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_start); + ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + ^ +/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' + BIT_SET(bitmap, offset_next); + ^~~~~~~ +[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c +[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c +[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] (size_t) number_of_values*inincr); @@ -1788,88 +2171,61 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - return (tmp); - ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - result = H5Tget_member_value(volume->mtype_id,idx,value); - ^~~ -[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': -/build/libminc-2.4.03/libsrc2/hyper.c:258:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(ndims, buffer, icount, H5Tget_size(type_id), - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:296:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), - ^~~~~ -[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': -/build/libminc-2.4.03/libsrc2/hyper.c:433:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = volume->number_of_dims; - ^~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:445:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - mspc_id = H5Screate_simple(ndims, hdf_count, NULL); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:453:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:496:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - slice_ndims = ndims; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:507:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - for (i = slice_ndims; i < ndims; i++ ) { - ^~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -/build/libminc-2.4.03/libsrc2/hyper.c:677:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - imap[volume->dim_indices[i]] = i; - ^ -/build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': -/build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = volume->number_of_dims; - ^~~~~~ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/hyper.c:16: -/build/libminc-2.4.03/libsrc2/hyper.c:933:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); - ^~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' - #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} - ^~~ -/build/libminc-2.4.03/libsrc2/hyper.c:940:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - slice_ndims = ndims; - ^~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:991:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - for (i = slice_ndims; i < ndims; i++ ) { - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - imap[volume->dim_indices[i]] = i; - ^ -[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - val_ptr = malloc(MI2typelen(att_type) * att_length); - ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 16%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] return dim_length; ^~~~~~~~~~ +[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.03/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] input_vector_length = get_vector_length(inmincid, loop_options); ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + att_length += strlen(arg_string) + 1; + ^~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + att_length += strlen(arg_string) + 1; + ^~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_input_buffers, chunk_num_voxels, input_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_output_files, block_num_voxels, output_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_extra_buffers, chunk_num_voxels, output_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_input_buffers, chunk_num_voxels, input_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_output_files, block_num_voxels, output_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + num_extra_buffers, chunk_num_voxels, output_vector_length, + ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': +/build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + input_vector_length = get_vector_length(inmincid, loop_options); + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + ^~~~~~~~~~~~~~~~~ +[ 23%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +/build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + val_ptr = malloc(MI2typelen(att_type) * att_length); + ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -1882,13 +2238,6 @@ /build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - att_length += strlen(arg_string) + 1; - ^~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - att_length += strlen(arg_string) + 1; - ^~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.03/libsrc/hdf_convenience.c:370:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] int typ_size = H5Tget_size(typ_id); @@ -1897,28 +2246,12 @@ int spc_size = H5Sget_simple_extent_npoints(spc_id); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attname': -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'do_voxel_loop': /build/libminc-2.4.03/libsrc/hdf_convenience.c:455:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] att_id = H5Aopen_idx(loc_id, attnum); ^~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); - ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c:458:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] status = H5Aget_name(att_id, MAX_NC_NAME, name); ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_input_buffers, chunk_num_voxels, input_vector_length, - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_output_files, block_num_voxels, output_vector_length, - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_extra_buffers, chunk_num_voxels, output_vector_length, - ^~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attinq': /build/libminc-2.4.03/libsrc/hdf_convenience.c:578:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] *length_ptr = typ_size; @@ -1934,22 +2267,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:958:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] hdf_set_length(var->dset_id, dimnm, length); ^~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_input_buffers, chunk_num_voxels, input_vector_length, - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_output_files, block_num_voxels, output_vector_length, - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - num_extra_buffers, chunk_num_voxels, output_vector_length, - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'setup_looping': -/build/libminc-2.4.03/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - input_vector_length = get_vector_length(inmincid, loop_options); - ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.03/libsrc/hdf_convenience.c:1147:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] H5Tset_size(ftyp_id, val_len); @@ -1994,624 +2311,6 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:1535:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] count[i] = length_ptr[i]; ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); - ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - mystart[idim] = start != NULL ? start[idim] : 0; - ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - myedges[idim] = edges[idim]; - ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - length[idim] = mymap[idim] * myedges[idim]; - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] - mystart[idim] += mystride[idim]; - ^~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - mystart[idim] = start[idim]; - ^~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); - ~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - myedges[idim] = varp->dims[idim] - mystart[idim]; - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] - myedges[idim] = varp->dims[idim] - mystart[idim]; - ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - fstart[i] = start_ptr[i]; - ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - count[i] = length_ptr[i]; - ^~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] - size_ptr[i] = dims[i]; - ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) - ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - file_id = H5Fopen(path, mode, fpid); - ^~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - file->wr_ok = (mode & H5F_ACC_RDWR) != 0; - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - dims[ndims++] = H5Tget_nmembers(type_id); - ^~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/hdf5.h:27, - from /build/libminc-2.4.03/libsrc/minc.h:170, - from /build/libminc-2.4.03/libsrc/minc_private.h:83, - from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: -/usr/include/hdf5/serial/H5Fpublic.h:53:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_EXCL (H5CHECK H5OPEN 0x0004u) /*fail if file already exists*/ - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2337:15: note: in expansion of macro 'H5F_ACC_EXCL' - cmode = H5F_ACC_EXCL; - ^~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Fpublic.h:52:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ - ^ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2340:15: note: in expansion of macro 'H5F_ACC_TRUNC' - cmode = H5F_ACC_TRUNC; - ^~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - ^~~~~ -[ 17%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c -/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': -/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - ucount[j++] = dim_len[i]; - ^~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - ^~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc.h:172, - from /build/libminc-2.4.03/libsrc/minc_private.h:83, - from /build/libminc-2.4.03/libsrc/minc_simple.c:38: -/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - #define nctypelen MI2typelen -/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' - restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - ^~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - p_var->var_atts = malloc(p_var->var_natts * - ^ -/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': -/build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - input[0] = voxel[spatial_axes[0]]; - ^~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - input[1] = voxel[spatial_axes[1]]; - ^~~~~ -/build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - input[2] = voxel[spatial_axes[2]]; - ^~~~~ -[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -[ 18%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - x1 = x; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - y1 = y + ( j * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - z1 = z + ( k * scale ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - r = miget_slice_range ( volume, pos, volume->number_of_dims, - ~~~~~~^~~~~~~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - osize[i] = isize[i] / scale; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = slice * scale; - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - count[0] = scale; - ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - ^ -[ 18%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -[ 18%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -[ 19%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -[ 20%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - *name = H5Tget_member_name(volume->ftype_id, index); - ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - offset = index * H5Tget_size(ftype_id); - ^ -[ 20%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - ndims = H5Sget_simple_extent_ndims ( fspc_id ); - ^~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 21%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -[ 21%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c -[ 22%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 22%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 22%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 22%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -[ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 23%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c -[ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - volume_filename = alloc_string( string_length(prefix_filename) + - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ - 100 ); - ~~~ -[ 25%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o -[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c -[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - handle->edge_lengths[i] = dims[i]; - ^~~~ -/build/libminc-2.4.03/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, - ^ -/build/libminc-2.4.03/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - handle->zlib_level = cd_values[0]; - ^~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -/build/libminc-2.4.03/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - ^ -[ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -[ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -[ 26%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': -/build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:132:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fopen(path, mode, prp_id); - ^~~~ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_create': -/build/libminc-2.4.03/libsrc2/volume.c:224:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:227:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - ^~~~~ -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: -/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' - start[d] = VIO_FLOOR( pos ); - ^~~~~~~~~ -In file included from /usr/include/hdf5/serial/hdf5.h:34, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/usr/include/hdf5/serial/H5Ppublic.h:44:31: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5OPEN H5open(), -/usr/include/hdf5/serial/H5Fpublic.h:52:32: note: in expansion of macro 'H5OPEN' - #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ - ^~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:584:35: note: in expansion of macro 'H5F_ACC_TRUNC' - file_id = _hdf_create(filename, H5F_ACC_TRUNC); - ^~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:634:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - hdf_size[i] = create_props->edge_lengths[i]; - ^~~~~~~~~~~~ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:664:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") - ~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' - #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} - ^~~ -/build/libminc-2.4.03/libsrc2/volume.c:896:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * - ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:900:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:988:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); - ^ -/build/libminc-2.4.03/libsrc2/volume.c: In function '_miget_irregular_spacing': -/build/libminc-2.4.03/libsrc2/volume.c:1171:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - hdim->offsets = malloc(n_points * sizeof(double)); - ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1173:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1195:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - hdim->widths = malloc(n_points * sizeof(double)); - ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1197:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/hdf5.h:27, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/build/libminc-2.4.03/libsrc2/volume.c: In function 'miopen_volume': -/usr/include/hdf5/serial/H5Fpublic.h:50:24: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_RDONLY (H5CHECK H5OPEN 0x0000u) /*absence of rdwr => rd-only */ - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1347:16: note: in expansion of macro 'H5F_ACC_RDONLY' - hdf_mode = H5F_ACC_RDONLY; - ^~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Fpublic.h:51:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - #define H5F_ACC_RDWR (H5CHECK H5OPEN 0x0001u) /*open for read and write */ - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1349:16: note: in expansion of macro 'H5F_ACC_RDWR' - hdf_mode = H5F_ACC_RDWR; - ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1421:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * - ^ -In file included from /build/libminc-2.4.03/libcommon/minc2_error.h:38, - from /build/libminc-2.4.03/libsrc2/minc2.h:11, - from /build/libminc-2.4.03/libsrc2/volume.c:32: -/build/libminc-2.4.03/libsrc2/volume.c:1426:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); - ^ -/build/libminc-2.4.03/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1509:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1510:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); - ^ -/build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); - ^ -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c -[ 28%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c -/build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': -/build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - strncpy(buffer, tmp, maxlen); - ^~~~~~ -[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c -[ 28%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c -[ 30%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -[ 30%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c -/build/libminc-2.4.03/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.03/libsrc2/volume.c:99:41: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size between 0 and 127 [-Wformat-truncation=] - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~ -/build/libminc-2.4.03/libsrc2/volume.c:101:21: - host_str, - ~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument - result = snprintf(id_str, length, "%s:%s:%s:%u:%u", - ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:99:37: note: using the range [0, 4294967295] for directive argument -In file included from /usr/include/stdio.h:873, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 7 and 304 bytes into a destination of size 128 - return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'ParseArgv': -/build/libminc-2.4.03/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; - ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - ParseLong(argv[srcIndex], &endPtr); - ^~~~~~~~~ -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - numSpaces = width + 1 - strlen(infoPtr->key); - ^~~~~ -[ 31%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - directory = alloc_string( slash_index ); - ^~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - *str = alloc_string( length ); - ^~~~~~ -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - progress->n_dots_so_far = n_dots; - ^~~~~~ -[ 33%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = malloc(sizeof(*files) * array_size); - ^ -/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - files = realloc(files, sizeof(*files) * array_size); - ^ -[ 33%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -[ 34%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - str = alloc_string( string_length(initial) ); - ^~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - stripped = alloc_string( last_non_blank - first_non_blank + 1 ); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 34%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c -/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] - offset_next = -1; /* Initialize. */ - ^ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_start); - ^~~~~~~ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - ^ -/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' - BIT_SET(bitmap, offset_next); - ^~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] - current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - ^ -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] - current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - ^ -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' - i = VIO_FLOOR( x ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' - j = VIO_FLOOR( y ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' - k = VIO_FLOOR( z ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] - coefs[c] = outside_value; - ^~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] - out_rgb[i] = c0 + w * dw; - ^~ -[ 34%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' - i = VIO_FLOOR( x ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' - j = VIO_FLOOR( y ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' - k = VIO_FLOOR( z ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' - l = VIO_FLOOR( t ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' - m = VIO_FLOOR( v ); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ^ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' - start[d] = VIO_FLOOR( pos ); - ^~~~~~~~~ -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -[ 36%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 37%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c -[ 37%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -[ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c -[ 38%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define VIO_FLOOR( x ) ((long) floor(x)) - ~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' - #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' - VIO_ROUND( (VIO_Real) FACTOR * amount_done)); - ^~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - slab_size *= file->sizes_in_file[d]; - ^~~~ -In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: -/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' - slab_size *= MIN( file->sizes_in_file[d], - ^~~ /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': /build/libminc-2.4.03/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; @@ -2680,6 +2379,7 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} ^~~~~~~~~~~~~~ +[ 23%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) ^ @@ -2761,6 +2461,92 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} ^~~~~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varputg': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1633:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + mystart = (hsize_t *)calloc(varp->ndims * 7, sizeof(hsize_t)); + ~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1649:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + mystart[idim] = start != NULL ? start[idim] : 0; + ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1658:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + myedges[idim] = edges[idim]; + ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1682:29: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + length[idim] = mymap[idim] * myedges[idim]; + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1683:45: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + stop[idim] = mystart[idim] + myedges[idim] * mystride[idim]; + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1740:16: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] + mystart[idim] += mystride[idim]; + ^~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1742:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + mystart[idim] = start[idim]; + ^~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_vargetg': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1810:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); + ~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:39: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + myedges[idim] = varp->dims[idim] - mystart[idim]; + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1837:22: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] + myedges[idim] = varp->dims[idim] - mystart[idim]; + ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varput': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1957:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + fstart[i] = start_ptr[i]; + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:1958:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + count[i] = length_ptr[i]; + ^~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_varsize': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2069:23: warning: conversion to 'long int' from 'hsize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] + size_ptr[i] = dims[i]; + ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_copy_attr': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2103:26: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + if ((val_ptr = malloc(hdf_size(spc_id, typ_id))) == NULL) + ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_open': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2223:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2239:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + file_id = H5Fopen(path, mode, fpid); + ^~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2249:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + file->wr_ok = (mode & H5F_ACC_RDWR) != 0; + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2271:37: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + dims[ndims++] = H5Tget_nmembers(type_id); + ^~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_create': +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2331:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:MI_MAX_VAR_BUFFER_SIZE*10, 1.0); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/hdf5.h:27, + from /build/libminc-2.4.03/libsrc/minc.h:170, + from /build/libminc-2.4.03/libsrc/minc_private.h:83, + from /build/libminc-2.4.03/libsrc/hdf_convenience.c:8: +/usr/include/hdf5/serial/H5Fpublic.h:53:22: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_EXCL (H5CHECK H5OPEN 0x0004u) /*fail if file already exists*/ + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2337:15: note: in expansion of macro 'H5F_ACC_EXCL' + cmode = H5F_ACC_EXCL; + ^~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Fpublic.h:52:23: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + #define H5F_ACC_TRUNC (H5CHECK H5OPEN 0x0002u) /*overwrite existing files */ + ^ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2340:15: note: in expansion of macro 'H5F_ACC_TRUNC' + cmode = H5F_ACC_TRUNC; + ^~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + ^~~~~ +[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] icvp->user_do_range = value; @@ -2822,7 +2608,7 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] *value = dvalue; ^~~~~~ -[ 38%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o +[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/image_conversion.c:173: /build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': @@ -2889,11 +2675,6 @@ /build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} ^~~~~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - new_history = alloc_string( old_att_length ); - ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] fval[0] = valid_range[0]; @@ -2938,16 +2719,53 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] att_val = malloc(att_len + strlen(tm_stamp) + 2); ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - slab_size *= count[d]; - ^~~~~ -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c -[ 40%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +[ 25%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c +/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': +/build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + ucount[j++] = dim_len[i]; + ^~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + ^~~~~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc.h:172, + from /build/libminc-2.4.03/libsrc/minc_private.h:83, + from /build/libminc-2.4.03/libsrc/minc_simple.c:38: +/build/libminc-2.4.03/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + #define nctypelen MI2typelen +/build/libminc-2.4.03/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' + restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + ^~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + p_var->var_atts = malloc(p_var->var_natts * + ^ +/build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_transform_to_world': +/build/libminc-2.4.03/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + input[0] = voxel[spatial_axes[0]]; + ^~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + input[1] = voxel[spatial_axes[1]]; + ^~~~~ +/build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + input[2] = voxel[spatial_axes[2]]; + ^~~~~ +[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c +[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -2974,12 +2792,22 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:520:14: note: in expansion of macro 'H5F_ACC_RDONLY' hmode = H5F_ACC_RDONLY; ^~~~~~~~~~~~~~ +[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] strlen(value) + 1, value); ~~~~~~~~~~~~~~^~~ -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c +[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c +[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c +[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c +[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] (size_t) number_of_values*inincr); @@ -3049,49 +2877,8 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - ((signed char *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - ((unsigned char *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - ((signed short *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - ((unsigned short *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - ((signed int *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - ((unsigned int *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - ((float *) dst)[i] = value; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); - ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); - ^ -[ 41%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.03/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] return dim_length; @@ -3139,65 +2926,10 @@ /build/libminc-2.4.03/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] get_vector_length(get_output_mincid(loopfile_info, 0), NULL); ^~~~~~~~~~~~~~~~~ -[ 42%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); - ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); - ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); - ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] - file->sizes_in_file[d] = dimension_size[d]; - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - slices_count*=dimension_size[d]; - ^~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - slices_count*=dimension_size[d]; - ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); - ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); - ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); - ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - slab_size *= file->sizes_in_file[d]; - ^~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; - ^~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - long_file_start[file_ind] = (long) file_start[file_ind]; - ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - long_file_count[file_ind] = (long) file_count[file_ind]; - ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - slab_size *= count[d]; - ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); - ~~~~^~~~~~~~~~~~~~~~~~~ -[ 42%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c +[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c +[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -3366,16 +3098,24 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); ^~~~~ -[ 42%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c /build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] val_ptr = malloc(MI2typelen(att_type) * att_length); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 43%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o +[ 30%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o +[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c +[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c +[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o +[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] ucount[j++] = dim_len[i]; @@ -3416,40 +3156,22 @@ /build/libminc-2.4.03/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] input[2] = voxel[spatial_axes[2]]; ^~~~~ -[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC 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CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon 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/build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu 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CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] volume_filename = alloc_string( string_length(prefix_filename) + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 100 ); ~~~ -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c +[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: @@ -3460,44 +3182,56 @@ /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' start[d] = VIO_FLOOR( pos ); ^~~~~~~~~ -[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security 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-I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c -[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 41%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c +[ 41%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + progress->n_dots_so_far = n_dots; + ^~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] directory = alloc_string( slash_index ); ^~~~~~~~~~~ -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] *str = alloc_string( length ); ^~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': -/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - progress->n_dots_so_far = n_dots; - ^~~~~~ -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] str = alloc_string( string_length(initial) ); @@ -3506,6 +3240,39 @@ /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] stripped = alloc_string( last_non_blank - first_non_blank + 1 ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + volume_filename = alloc_string( string_length(prefix_filename) + + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ + 100 ); + ~~~ +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c +/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] + current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + ^ +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] + current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + ^ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:18: +/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' + start[d] = VIO_FLOOR( pos ); + ^~~~~~~~~ +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: @@ -3534,14 +3301,8 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] out_rgb[i] = c0 + w * dw; ^~ -/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] - current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - ^ -/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] - current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); - ^ -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: @@ -3576,7 +3337,6 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' m = VIO_FLOOR( v ); ^~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] #define VIO_FLOOR( x ) ((long) floor(x)) @@ -3584,18 +3344,37 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' start[d] = VIO_FLOOR( pos ); ^~~~~~~~~ -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c -[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + slab_size *= file->sizes_in_file[d]; + ^~~~ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:21: +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' + slab_size *= MIN( file->sizes_in_file[d], + ^~~ +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: /build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': +[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] #define VIO_FLOOR( x ) ((long) floor(x)) ~^~~~~~~~~~~~~~~~ @@ -3605,6 +3384,131 @@ /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' VIO_ROUND( (VIO_Real) FACTOR * amount_done)); ^~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c +[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': +/build/libminc-2.4.03/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + progress->n_dots_so_far = n_dots; + ^~~~~~ +[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c +[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + directory = alloc_string( slash_index ); + ^~~~~~~~~~~ +[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + *str = alloc_string( length ); + ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c +[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + new_history = alloc_string( old_att_length ); + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + slab_size *= count[d]; + ^~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + str = alloc_string( string_length(initial) ); + ^~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + stripped = alloc_string( last_non_blank - first_non_blank + 1 ); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c +/build/libminc-2.4.03/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] + current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + ^ +/build/libminc-2.4.03/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] + current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); + ^ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:238:9: note: in expansion of macro 'VIO_FLOOR' + i = VIO_FLOOR( x ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:239:9: note: in expansion of macro 'VIO_FLOOR' + j = VIO_FLOOR( y ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' + k = VIO_FLOOR( z ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] + coefs[c] = outside_value; + ^~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] + out_rgb[i] = c0 + w * dw; + ^~ +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:19: +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:404:13: note: in expansion of macro 'VIO_FLOOR' + i = VIO_FLOOR( x ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:405:13: note: in expansion of macro 'VIO_FLOOR' + j = VIO_FLOOR( y ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:406:13: note: in expansion of macro 'VIO_FLOOR' + k = VIO_FLOOR( z ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:407:13: note: in expansion of macro 'VIO_FLOOR' + l = VIO_FLOOR( t ); + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' + m = VIO_FLOOR( v ); + ^~~~~~~~~ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); @@ -3624,20 +3528,39 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' slab_size *= MIN( file->sizes_in_file[d], ^~~ -[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - new_history = alloc_string( old_att_length ); - ^~~~~~~~~~~~~~ -[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - slab_size *= count[d]; - ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ^ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' + start[d] = VIO_FLOOR( pos ); + ^~~~~~~~~ +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +In file included from /build/libminc-2.4.03/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.03/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.03/volume_io/Volumes/input_volume.c:20: +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c: In function 'input_volume': +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + #define VIO_FLOOR( x ) ((long) floor(x)) + ~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' + #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) + ^~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' + VIO_ROUND( (VIO_Real) FACTOR * amount_done)); + ^~~~~~~~~ +[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3675,10 +3598,19 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] slab_size *= file->sizes_in_file[d]; ^~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; ^~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + new_history = alloc_string( old_att_length ); + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + slab_size *= count[d]; + ^~~~~ /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); @@ -3716,8 +3648,10 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); ^ -[ 60%] Linking C static library libminc2_static.a -/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake +[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3732,6 +3666,106 @@ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); ~~~~^~~~~~~~~~~~~~~~~~~ +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c +[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); + ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); + ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); + ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] + file->sizes_in_file[d] = dimension_size[d]; + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + slices_count*=dimension_size[d]; + ^~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + slices_count*=dimension_size[d]; + ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); + ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); + ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); + ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + ((signed char *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + ((unsigned char *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + ((signed short *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + ((unsigned short *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + ((signed int *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + ((unsigned int *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + ((float *) dst)[i] = value; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + slab_size *= file->sizes_in_file[d]; + ^~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); + ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); + ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; + ^~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + long_file_start[file_ind] = (long) file_start[file_ind]; + ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + long_file_count[file_ind] = (long) file_count[file_ind]; + ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1214:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + slab_size *= count[d]; + ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); + ~~~~^~~~~~~~~~~~~~~~~~~ +[ 60%] Linking C static library libminc2_static.a +/usr/bin/cmake -P 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/usr/bin/ranlib libminc2_static.a @@ -3747,177 +3781,130 @@ make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= -Scanning dependencies of target minc_long_attr -Scanning dependencies of target minc2-record-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target minc2-leak-test -Scanning dependencies of target test_mconv -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build -Scanning dependencies of target minc2-read-metadata +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend Scanning dependencies of target minc_io make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build -Scanning dependencies of target minc2-volprops-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= +Scanning dependencies of target minc2-read-metadata +Scanning dependencies of target minc2-leak-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target volume_test make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target minc2-grpattr-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target icv_dim +make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build -Scanning dependencies of target minc2-create-test-images-2 -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build -Scanning dependencies of target minc2-create-test-images +Scanning dependencies of target minc2-volprops-test +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target minc2-hyper-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= +Scanning dependencies of target minc2-create-test-images +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' Scanning dependencies of target copy_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target minc2-record-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build +Scanning dependencies of target minc_long_attr make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target volume_test make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target minc2-create-test-images-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target minc2-grpattr-test +Scanning dependencies of target test_mconv +[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build -Scanning dependencies of target mincapi make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 61%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -[ 61%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c +Scanning dependencies of target minc2-hyper-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 61%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp [ 61%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c [ 61%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -Scanning dependencies of target minc_tst -[ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -[ 62%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o -[ 62%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o -[ 62%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c -[ 62%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c +Scanning dependencies of target mincapi +[ 61%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c -[ 62%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 62%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c [ 62%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c +[ 62%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o +[ 62%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c +[ 62%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 62%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o [ 63%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c -[ 63%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c -[ 63%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c -/build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-record-test.c:86:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[1] = j; - ^ -/build/libminc-2.4.03/testdir/minc2-record-test.c:87:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[2] = k; - ^ -/build/libminc-2.4.03/testdir/minc2-record-test.c:105:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-record-test.c:106:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[1] = j; - ^ -/build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - coords[2] = k; - ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'check_high_water_mark': /build/libminc-2.4.03/testdir/minc2-leak-test.c:36:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] return usage.ru_maxrss; ~~~~~^~~~~~~~~~ -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] - buf[i] = i * 0.001f; - ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': /build/libminc-2.4.03/testdir/minc2-leak-test.c:54:24: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] if (cnt <= 0) return cnt; @@ -3925,9 +3912,6 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'long unsigned int' from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] objs = malloc(cnt * sizeof(hid_t)); ^ -/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ /build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'ssize_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); ^~~ @@ -3947,6 +3931,7 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:154:15: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] new_obj = H5Fget_obj_count(hvol->hdf_id, H5F_OBJ_ALL); ^~~~~~~~~~~~~~~~ +[ 64%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o /build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'create_test_image': /build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); @@ -3958,6 +3943,9 @@ /build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] result = miget_dimension_sizes(dimensions, ndims, sizes); ^~~~~ +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c +[ 64%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); @@ -3979,6 +3967,36 @@ /build/libminc-2.4.03/testdir/minc_long_attr.c:298:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] return (errors); ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_float_image': +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:143:17: warning: conversion from 'int' to 'float' may change value [-Wconversion] + buf[i] = i * 0.001f; + ^ +/build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c:86:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[1] = j; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c:87:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[2] = k; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c:105:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c:106:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[1] = j; + ^ +/build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + coords[2] = k; + ^ /build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; @@ -4003,14 +4021,6 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:263:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[2] = k; ^ -/build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': -/build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - total *= dims[i].length; - ^~ -/build/libminc-2.4.03/testdir/mincapi.c: In function 'test4': -/build/libminc-2.4.03/testdir/mincapi.c:269:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - total *= dims[i].length; - ^~ /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:393:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] short t = stemp[i][j][k]; @@ -4021,12 +4031,34 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:424:38: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] stemp[i][j][k] = t; ^ -/build/libminc-2.4.03/testdir/mincapi.c:352:14: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000) + (j * 100) + k; - ^ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] short t = stmp2[i][j][k]; ^~~~~ +/build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test3': +/build/libminc-2.4.03/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +/build/libminc-2.4.03/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[1] = j; + ^ +/build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[2] = k; + ^ +[ 65%] Linking C executable minc2-leak-test +[ 66%] Linking C executable minc2-read-metadata +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 +/build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': +/build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + total *= dims[i].length; + ^~ +/build/libminc-2.4.03/testdir/mincapi.c: In function 'test4': +/build/libminc-2.4.03/testdir/mincapi.c:269:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + total *= dims[i].length; + ^~ +/build/libminc-2.4.03/testdir/mincapi.c:352:14: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000) + (j * 100) + k; + ^ +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 /build/libminc-2.4.03/testdir/mincapi.c: In function 'test5': /build/libminc-2.4.03/testdir/mincapi.c:409:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] total *= dims[TST_X].length; @@ -4045,95 +4077,28 @@ /build/libminc-2.4.03/testdir/mincapi.c:799:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] return (errors); ^ -/build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'test3': -/build/libminc-2.4.03/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ -/build/libminc-2.4.03/testdir/minc2-hyper-test.c:815:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[1] = j; - ^ -/build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[2] = k; - ^ -/build/libminc-2.4.03/testdir/minc.c: In function 'main': -/build/libminc-2.4.03/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - ioff=(j*count[1]+i)*count[2]; - ^ -[ 64%] Linking C executable minc2-volprops-test -[ 64%] Linking C executable test_mconv +[ 67%] Linking C executable minc2-volprops-test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 +[ 68%] Linking C executable minc2-create-test-images-2 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 69%] Linking C executable minc_long_attr +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 +[ 69%] Linking C executable minc2-record-test +[ 69%] Linking C executable test_mconv +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 -[ 64%] Linking C executable minc2-record-test -[ 65%] Linking C executable icv_dim -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 66%] Linking C executable minc2-read-metadata -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 -[ 66%] Linking C executable copy_xfm -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 -[ 67%] Linking C executable minc_tst -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 68%] Linking C executable minc2-create-test-images +[ 70%] Linking C executable minc2-create-test-images cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 69%] Linking C executable minc2-leak-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 -[ 70%] Linking C executable minc2-create-test-images-2 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 -[ 71%] Linking C executable minc_long_attr -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 71%] Linking C executable minc2-grpattr-test -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 71%] Built target test_mconv -[ 72%] Linking C executable volume_test -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target test_xfm -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 72%] Built target minc2-record-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= -[ 72%] Built target minc2-volprops-test -[ 73%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= -[ 73%] Built target icv_dim -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target icv -Scanning dependencies of target minc_types -Scanning dependencies of target icv_vec -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 70%] Linking C executable copy_xfm +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 In file included from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -4146,47 +4111,17 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(j>=0) return _info[j].length; -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build -[ 73%] Built target minc_tst -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 73%] Built target minc2-read-metadata -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= -[ 73%] Built target minc2-create-test-images -[ 73%] Built target minc2-create-test-images-2 -[ 73%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] _info[i].start+=_info[i].step*(dimlength-1); ~~~~~~~~~~^~~ -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _slab_len*=_info[_ndims-i-1].length; ^~~~~~ -[ 73%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= -[ 74%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::open(const char*, const minc_info&, int, nc_type, int)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:712:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _ndims=_info.size(); ~~~~~~~~~~^~ -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:746:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _slab_len*=_info[_ndims-i-1].length; ^~~~~~ @@ -4229,7 +4164,6 @@ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} ^~~ -[ 74%] Built target copy_xfm /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:918:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); @@ -4267,17 +4201,6 @@ /build/libminc-2.4.03/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} ^~~ -[ 75%] Linking C executable mincapi -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= -Scanning dependencies of target icv_dim1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build -Scanning dependencies of target icv_fillvalue -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1459:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] att_length += strlen(append_history) + 1; @@ -4302,49 +4225,162 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:1508:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); ~~~~~~~~^~ -Scanning dependencies of target verify_xfm +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 71%] Linking C executable volume_test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 71%] Linking C executable minc2-grpattr-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, + from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:18, + from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp:18: +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + return _slice_dimensions; + ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(j>=0) return _info[j].length; +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 71%] Built target minc2-read-metadata +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend +[ 71%] Built target minc2-leak-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= +Scanning dependencies of target minc_tst +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 71%] Linking C executable minc2-hyper-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 +[ 71%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c +Scanning dependencies of target icv_dim +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 71%] Built target test_mconv +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= +[ 71%] Built target minc2-create-test-images-2 +[ 71%] Built target minc2-volprops-test +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 71%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= +[ 72%] Linking C executable mincapi +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= +[ 72%] Built target minc2-record-test +Scanning dependencies of target test_xfm +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend +Scanning dependencies of target minc_types +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +[ 72%] Built target minc_long_attr +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build +[ 72%] Built target minc2-create-test-images +Scanning dependencies of target icv +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 75%] Built target minc_long_attr +Scanning dependencies of target icv_vec make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 75%] Built target minc2-leak-test -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build +/build/libminc-2.4.03/testdir/minc.c: In function 'main': +/build/libminc-2.4.03/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + ioff=(j*count[1]+i)*count[2]; + ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= +[ 72%] Built target copy_xfm make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target minc2-label-test -Scanning dependencies of target create_grid_xfm +make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend +[ 73%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= +[ 73%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c +Scanning dependencies of target icv_dim1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target icv_fillvalue +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 74%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o +Scanning dependencies of target create_grid_xfm +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c +[ 74%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build -[ 75%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 75%] Linking C executable minc_tst +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +[ 75%] Built target minc2-grpattr-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +Scanning dependencies of target verify_xfm +[ 75%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 75%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 75%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c -[ 75%] Built target minc2-grpattr-test -Scanning dependencies of target minc2-convert-test -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c -[ 76%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 76%] Linking C executable minc2-hyper-test -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +[ 76%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c +[ 76%] Built target volume_test +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 76%] Built target minc2-hyper-test make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend -[ 77%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp -[ 78%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +[ 77%] Linking C executable icv_dim /build/libminc-2.4.03/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.03/testdir/icv_vec.c:65:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); @@ -4352,21 +4388,50 @@ /build/libminc-2.4.03/testdir/icv_vec.c:66:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] double *dvalue = malloc(N_ELEMENTS * sizeof(double)); ^ -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c /build/libminc-2.4.03/testdir/icv_vec.c:41:24: warning: conversion from 'int' to 'short int' may change value [-Wconversion] #define TVAL(z,y,x,v) ((z)*1000+(y)*100+(x)*10+(v)) ^ /build/libminc-2.4.03/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' ivalue[c] = TVAL(i, j, k, v); ^~~~ -[ 79%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 +Scanning dependencies of target minc2-label-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +[ 77%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 78%] Linking C executable minc_types +Scanning dependencies of target minc2-convert-test +[ 79%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +[ 79%] Built target mincapi Scanning dependencies of target minc2-datatype-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 80%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o +[ 80%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c +[ 80%] Linking C executable test_xfm +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 +Scanning dependencies of target minc2-large-attribute +[ 81%] Linking C executable icv_dim1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': /build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4377,15 +4442,17 @@ /build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = k; ^ -[ 79%] Built target volume_test -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= -[ 79%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -[ 79%] Linking C executable test_xfm -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 -[ 80%] Linking C executable minc_types +[ 82%] Linking C executable icv +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 83%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +[ 83%] Linking C executable create_grid_xfm +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c +[ 83%] Linking C executable icv_fillvalue +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4405,25 +4472,12 @@ /build/libminc-2.4.03/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] voxel[2] = coords[2]; ^~~~~~ -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 -[ 81%] Linking C executable icv -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 -Scanning dependencies of target minc2-large-attribute make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 82%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c -[ 83%] Linking C executable icv_dim1 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 -[ 83%] Linking C executable icv_fillvalue -[ 83%] Linking C executable create_grid_xfm -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 83%] Built target minc_tst +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend /build/libminc-2.4.03/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] start[0] = i; @@ -4437,39 +4491,67 @@ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); ^~~~~~~~~~~~~~ -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 83%] Built target mincapi -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 84%] Linking C executable minc2-datatype-test -[ 85%] Linking C executable verify_xfm -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 +[ 83%] Linking C executable icv_vec +[ 83%] Built target icv_dim +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 +[ 84%] Linking C executable verify_xfm cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 Scanning dependencies of target minc2-full-test +[ 84%] Built target minc_types make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build +Scanning dependencies of target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.03/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 85%] Linking C executable minc2-datatype-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 +[ 85%] Linking C executable minc2-label-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 85%] Linking C executable minc2-convert-test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 -[ 85%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -[ 85%] Linking C executable icv_vec +[ 86%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 86%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 -[ 85%] Linking C executable minc2-label-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 85%] Linking C executable minc2-large-attribute -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 86%] Built target test_xfm +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +Scanning dependencies of target minc2-vector_dimension-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 86%] Linking C executable minc2-large-attribute cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 +Scanning dependencies of target minc2-hyper-test-2 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 85%] Built target minc2-hyper-test +[ 87%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c +[ 88%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4480,6 +4562,7 @@ /build/libminc-2.4.03/testdir/minc2-full-test.c:113:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = k; ^ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test2': /build/libminc-2.4.03/testdir/minc2-full-test.c:227:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; @@ -4505,81 +4588,19 @@ /build/libminc-2.4.03/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = k; ^ -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= -Scanning dependencies of target test_arg_parse -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 86%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c -[ 86%] Built target icv -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 86%] Built target minc_types -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= -Scanning dependencies of target minc2-vector_dimension-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build -[ 86%] Built target test_xfm -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 88%] Built target icv_fillvalue make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend -[ 87%] Linking C executable minc2-full-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 -Scanning dependencies of target minc2-hyper-test-2 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build -[ 88%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c -[ 88%] Built target icv_fillvalue -Scanning dependencies of target minc2-multires-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +[ 88%] Built target icv make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 88%] Linking C executable test_arg_parse -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 +Scanning dependencies of target minc2-multires-test [ 88%] Built target icv_dim1 -[ 89%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend -[ 89%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c -[ 89%] Built target create_grid_xfm -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, - from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:18, - from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp:18: -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - ~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - return _slice_dimensions; - ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(j>=0) return _info[j].length; +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +[ 88%] Built target create_grid_xfm /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[3] = i; @@ -4588,22 +4609,64 @@ coords[0] = i; ^ make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= +[ 88%] Linking C executable test_arg_parse Scanning dependencies of target multidim_test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 88%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': +/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + start[0] = i; + ^ +make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend +[ 88%] Built target verify_xfm +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= +[ 88%] Built target icv_vec /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend Scanning dependencies of target minc2-slice-test -make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build -[ 89%] Built target minc2-datatype-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 89%] Linking C executable minc2-full-test +[ 89%] Built target minc2-label-test +make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend +[ 89%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o +[ 89%] Built target minc2-large-attribute +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= +Scanning dependencies of target icv_range +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build +Scanning dependencies of target minc2-valid-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 90%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c +Scanning dependencies of target minc_conversion +Scanning dependencies of target minc2-read-rgb /build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; ^ @@ -4616,49 +4679,30 @@ /build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] voxel = i*10000 + j*100 + k; ^ -Scanning dependencies of target icv_range make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 90%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -[ 90%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': -/build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - start[0] = i; - ^ -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -Scanning dependencies of target minc2-valid-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 91%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build -[ 91%] Built target verify_xfm +[ 91%] Linking C executable minc2-vector_dimension-test +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 91%] Built target icv_vec -[ 91%] Built target minc2-convert-test -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend -make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= -[ 91%] Built target minc2-label-test +[ 91%] Linking C executable minc2-hyper-test-2 +[ 91%] Built target minc2-convert-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 [ 92%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c -Scanning dependencies of target minc_conversion -[ 92%] Built target minc2-large-attribute -Scanning dependencies of target minc2-read-rgb -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 92%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c +[ 92%] Built target minc2-datatype-test +[ 92%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c /build/libminc-2.4.03/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[0] = i; /*Z*/ @@ -4669,19 +4713,46 @@ /build/libminc-2.4.03/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] coords[2] = rand()%CY; /*Y*/ ^~~~ -[ 92%] Linking C executable minc2-vector_dimension-test -[ 92%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -[ 92%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 93%] Linking C executable minc2-multires-test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 -[ 93%] Linking C executable minc2-hyper-test-2 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': +/build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c:156:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c:156:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test3': +/build/libminc-2.4.03/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + total *= dims[i].length; + ^~ +/build/libminc-2.4.03/testdir/minc_conversion.c:263:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c:263:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c:263:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] + float tmp = (i * 10000.0f) + (j * 100.0f) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': +/build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] + float tmp = (i * 10000) + (j * 100) + k; + ^ +/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'main': +/build/libminc-2.4.03/testdir/minc_conversion.c:414:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + return (errors); + ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 93%] Linking C executable minc2-slice-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 +[ 93%] Linking C executable minc2-valid-test +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 +[ 93%] Built target test_arg_parse /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] return avg/length; @@ -4713,80 +4784,43 @@ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:134:53: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); ^~~~ -[ 93%] Linking C executable minc2-slice-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 -[ 93%] Built target minc2-full-test -/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': -/build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c:156:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c:156:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test3': -/build/libminc-2.4.03/testdir/minc_conversion.c:192:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - total *= dims[i].length; - ^~ -/build/libminc-2.4.03/testdir/minc_conversion.c:263:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c:263:41: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c:263:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] - float tmp = (i * 10000.0f) + (j * 100.0f) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test4': -/build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] - float tmp = (i * 10000) + (j * 100) + k; - ^ -/build/libminc-2.4.03/testdir/minc_conversion.c: In function 'main': -/build/libminc-2.4.03/testdir/minc_conversion.c:414:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - return (errors); - ^ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 93%] Linking C executable minc2-valid-test -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 93%] Linking C executable icv_range cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 93%] Built target minc2-full-test /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 93%] Built target test_arg_parse make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 93%] Built target minc2-vector_dimension-test [ 93%] Built target minc2-hyper-test-2 -[ 93%] Built target minc2-multires-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 93%] Built target minc2-vector_dimension-test [ 94%] Linking C executable minc_conversion cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 -[ 94%] Built target minc2-slice-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 94%] Built target minc2-multires-test +[ 94%] Built target minc2-slice-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 94%] Built target minc2-valid-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 94%] Built target icv_range +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 94%] Linking C executable minc2-read-rgb cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 94%] Built target minc_conversion -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 94%] Linking C executable multidim_test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 -[ 94%] Built target minc2-read-rgb /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 94%] Built target multidim_test [ 94%] Linking CXX shared library libminc_io.so cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 94%] Built target minc2-read-rgb +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 94%] Built target multidim_test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [ 94%] Built target minc_io @@ -4794,57 +4828,57 @@ make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= -Scanning dependencies of target ezminc_rw_test Scanning dependencies of target volume_msq_dist -Scanning dependencies of target trilinear_resample +Scanning dependencies of target volume_avg Scanning dependencies of target create_grid_file +Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build -make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build +Scanning dependencies of target ezminc_rw_test2 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build -Scanning dependencies of target ezminc_rw_test2 -Scanning dependencies of target volume_avg +make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build +Scanning dependencies of target ezminc_rw_test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -[ 95%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -[ 96%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -[ 97%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o +[ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp +[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o +[ 97%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp -[ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -[ 97%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp -In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:15: +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-x86_64-linux-gnu -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4868,7 +4902,7 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:15: +In file included from /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:15: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4915,17 +4949,8 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:70:49: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - if(_cur[i](_rw->dim(i).length)) - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' -/build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:72:55: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:7: +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, + from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4937,8 +4962,44 @@ /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.03/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, - from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + old_step[i-1]=new_info[rdr.map_space(i)].step; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + old_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + new_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); + ~~~~^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + ~^~~~~~ +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); + ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:70:49: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + if(_cur[i](_rw->dim(i).length)) + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' +/build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp:72:55: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] +In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:7: /build/libminc-2.4.03/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.03/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4959,9 +5020,9 @@ vol(x,y,z)=x+y+z; ~~~^~ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:19: + from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:98:23: required from here +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:80:26: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _size[i]=0; ~~~~~^ @@ -4974,9 +5035,43 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _direction_cosines[i][i]=1.0; ~~~~~~~~~~~~~~~~~~~~~^ -In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:71: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + size_t x=floor(_x); + ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + size_t y=floor(_y); + ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + size_t z=floor(_z); + ~~~~~^~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:331:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + float dx=_x-x; + ~~^~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:332:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + float dy=_y-y; + ~~^~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + float dz=_z-z; + ~~^~ +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:19: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:19:26: required from here +/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:98:23: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _size[i]=0; ~~~~~^ @@ -4986,22 +5081,35 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _start[i]=0.0; ~~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _direction_cosines[i][i]=1.0; + ~~~~~~~~~~~~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:143:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _size[i]=a._size[i]; ~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _direction_cosines[i][i]=1.0; - ~~~~~~~~~~~~~~~~~~~~~^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:143:27: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _size[i]=a._size[i]; ~~~~~~~^ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - old_step[i-1]=new_info[rdr.map_space(i)].step; -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - old_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ +In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:19:26: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _size[i]=0; + ~~~~~^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator+=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:121:13: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:440:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5010,24 +5118,23 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:440:31: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(_size[i]!=a._size[i]) ~~~~~~~^ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _step[i]=0.0; + ~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _start[i]=0.0; + ~~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _direction_cosines[i][i]=1.0; + ~~~~~~~~~~~~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume& minc::simple_volume::operator*=(const minc::simple_volume&) [with T = float]': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:122:13: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:475:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(_size[i]!=a._size[i]) ~~~~~^ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - new_start[i-1]=new_info[rdr.map_space(i)].start; /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:475:31: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(_size[i]!=a._size[i]) ~~~~~~~^ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); - ~~~~^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_non_standard_volume(minc::minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:21:52: required from here @@ -5043,28 +5150,30 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:264:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(dimorder[i]); ~~~~~~~^~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - ~^~~~~~ -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); - ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - volume*=info[i].length; - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] - buffer[i]=static_cast(random())*100.0/RAND_MAX; - ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - short_attr[i]=i; +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:23:31: required from here @@ -5099,44 +5208,44 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - volume*=info[i].length; - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] - buffer[i]=static_cast(random())*100.0/RAND_MAX; - ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - short_attr[i]=i; -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:20:51: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:31:5: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _stride[i]=_size[i-1]*_stride[i-1]; ~~~~~~~^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _stride[i]=_size[i-1]*_stride[i-1]; ~^~ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] _stride[i]=_size[i-1]*_stride[i-1]; ~^~ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] total*=_size[i]; ~~~~~^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ +In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + if(_cur[i](_rw->dim(i).length)) + ^ In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:19: /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': @@ -5154,11 +5263,16 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] total*=_size[i]; ~~~~~^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - volume*=info[i].length; - ~~~~~~^~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:4: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:20:51: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _stride[i]=_size[i-1]*_stride[i-1]; + ~~~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _stride[i]=_size[i-1]*_stride[i-1]; + ~^~ In file included from /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:18: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' @@ -5166,12 +5280,23 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] if(rw.map_space(i)<0) continue; ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + _stride[i]=_size[i-1]*_stride[i-1]; + ~^~ /build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] strides[rw.map_space(i)]=str; ^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + total*=_size[i]; + ~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' +/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' +/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:132:39: required from here @@ -5184,6 +5309,16 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + volume*=info[i].length; + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] + buffer[i]=static_cast(random())*100.0/RAND_MAX; + ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + short_attr[i]=i; In file included from /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:3: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:268:5: required from 'void minc::load_non_standard_volume(minc::minc_1_reader&, T*) [with T = float]' @@ -5191,7 +5326,12 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] if(_cur[i](_rw->dim(i).length)) ^ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + volume*=info[i].length; + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} may change value [-Wfloat-conversion] buffer[i]=static_cast(random())*100.0/RAND_MAX; ^ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] @@ -5203,34 +5343,11 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] if(_cur[i](_rw->dim(i).length)) ^ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:80:26: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:185:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _size[i]=0; - ~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:186:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _step[i]=0.0; - ~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:187:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _start[i]=0.0; - ~~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:190:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _direction_cosines[i][i]=1.0; - ~~~~~~~~~~~~~~~~~~~~~^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:100:40: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - volume*=info[i].length; - ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - short_attr[i]=i; /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] def[0]=amp*sin(M_PI*pos[0]/100.0); @@ -5241,39 +5358,43 @@ /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] def[2]=amp*cos(3*M_PI*pos[2]/100.0); ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:115:71: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - size_t x=floor(_x); - ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - size_t y=floor(_y); - ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - size_t z=floor(_z); - ~~~~~^~~~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:331:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - float dx=_x-x; - ~~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:332:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - float dy=_y-y; - ~~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - float dz=_z-z; - ~~^~ -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:187:61: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + volume*=info[i].length; + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] + buffer[i]=static_cast(random())*100.0/RAND_MAX; + ^ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + short_attr[i]=i; +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + volume*=info[i].length; + ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:18: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + short_attr[i]=i; +In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:11: +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; minc::simple_volume::vect = minc::fixed_vec<3, double>; minc::simple_volume::idx = minc::fixed_vec<3, long unsigned int>]': +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:112:69: required from here +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + ~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:27: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + ~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + ~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:44: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + ~~~~~~^ +/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:70: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; + ~~~~~~~~~~~~~~~~~~~~~^ In file included from /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:8: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' @@ -5287,18 +5408,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here @@ -5311,18 +5420,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here @@ -5335,18 +5432,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:119:45: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here @@ -5395,64 +5480,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:11: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; minc::simple_volume::vect = minc::fixed_vec<3, double>; minc::simple_volume::idx = minc::fixed_vec<3, long unsigned int>]': -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:112:69: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - ~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:27: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - ~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - ~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:34: warning: conversion from 'long unsigned int' to 'double' may change value [-Wconversion] -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:44: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - ~~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:544:70: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - ret[i]+=(_step[j]*iii[j]+_start[j])*_direction_cosines[j][i]; - ~~~~~~~~~~~~~~~~~~~~~^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - if(rw.map_space(i)<0) continue; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - strides[rw.map_space(i)]=str; - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - str*=rw.ndim(i); - ^ -In file included from /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:18: -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:31:5: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _stride[i]=_size[i-1]*_stride[i-1]; - ~~~~~~~^ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _stride[i]=_size[i-1]*_stride[i-1]; - ~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - _stride[i]=_size[i-1]*_stride[i-1]; - ~^~ -/build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - total*=_size[i]; - ~~~~~^ -In file included from /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:17: -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - if(_cur[i](_rw->dim(i).length)) - ^ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:160:9: required from 'minc::simple_volume::simple_volume(size_t, size_t, size_t) [with T = minc::fixed_vec<3, float>; size_t = long unsigned int]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:103:45: required from here @@ -5468,11 +5495,18 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:54:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] total*=_size[i]; ~~~~~^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]' -/build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc::minc_1_reader&, minc::simple_volume&) [with T = float]' -/build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:81:44: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = double]': +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + if(rw.map_space(i)<0) continue; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + strides[rw.map_space(i)]=str; + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + str*=rw.ndim(i); + ^ In file included from /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = minc::fixed_vec<3, float>]' @@ -5498,18 +5532,6 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - if(_cur[i](_rw->dim(i).length)) - ^ -/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = int]': -/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = int]' -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' -/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here -/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc::minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.03/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc::minc_1_writer&, const minc::simple_volume&) [with T = minc::fixed_vec<3, float>]' /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:124:36: required from here @@ -5522,6 +5544,18 @@ /build/libminc-2.4.03/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] str*=rw.ndim(i); ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = unsigned char]' +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + if(_cur[i](_rw->dim(i).length)) + ^ +/build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = int]': +/build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = int]' +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' +/build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:184:55: required from here +/build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.03/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.03/ezminc/minc_1_simple.h:221:5: required from 'void minc::load_standard_volume(minc::minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' @@ -5532,31 +5566,31 @@ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -[ 98%] Linking CXX executable ezminc_rw_test2 -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 99%] Linking CXX executable volume_msq_dist +[ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 +[ 99%] Linking CXX executable ezminc_rw_test2 +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[100%] Built target ezminc_rw_test2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[100%] Built target ezminc_rw_test2 [100%] Built target volume_msq_dist +[100%] Linking CXX executable trilinear_resample +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf [100%] Linking CXX executable create_grid_file cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [100%] Built target volume_avg -[100%] Linking CXX executable trilinear_resample -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[100%] Built target create_grid_file make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' [100%] Built target trilinear_resample +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[100%] Built target create_grid_file [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.03/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf @@ -5574,11 +5608,11 @@ /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/libminc-2.4.03/obj-x86_64-linux-gnu Start 1: ezminc_rw_test - 1/52 Test #1: ezminc_rw_test ................... Passed 0.03 sec + 1/52 Test #1: ezminc_rw_test ................... Passed 0.04 sec Start 2: minc_types-1 - 2/52 Test #2: minc_types-1 ..................... Passed 0.04 sec + 2/52 Test #2: minc_types-1 ..................... Passed 0.03 sec Start 3: minc_types-2 - 3/52 Test #3: minc_types-2 ..................... Passed 0.11 sec + 3/52 Test #3: minc_types-2 ..................... Passed 0.16 sec Start 4: icv_dim1-1 4/52 Test #4: icv_dim1-1 ....................... Passed 0.02 sec Start 5: icv_dim1-2 @@ -5586,53 +5620,53 @@ Start 6: icv_dim-1 6/52 Test #6: icv_dim-1 ........................ Passed 0.02 sec Start 7: icv_dim-2 - 7/52 Test #7: icv_dim-2 ........................ Passed 0.02 sec + 7/52 Test #7: icv_dim-2 ........................ Passed 0.03 sec Start 8: icv_fillvalue-1 - 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.03 sec + 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.02 sec Start 9: icv_fillvalue-2 - 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.03 sec + 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.02 sec Start 10: icv_range-1 10/52 Test #10: icv_range-1 ...................... Passed 0.03 sec Start 11: icv_range-2 -11/52 Test #11: icv_range-2 ...................... Passed 0.08 sec +11/52 Test #11: icv_range-2 ...................... Passed 0.09 sec Start 12: arg_parse -12/52 Test #12: arg_parse ........................ Passed 0.36 sec +12/52 Test #12: arg_parse ........................ Passed 0.35 sec Start 13: icv 13/52 Test #13: icv .............................. Passed 0.02 sec Start 14: icv_vec 14/52 Test #14: icv_vec .......................... Passed 0.02 sec Start 15: minc -15/52 Test #15: minc ............................. Passed 0.01 sec +15/52 Test #15: minc ............................. Passed 0.02 sec Start 16: mincapi -16/52 Test #16: mincapi .......................... Passed 0.06 sec +16/52 Test #16: mincapi .......................... Passed 0.08 sec Start 17: test_mconv -17/52 Test #17: test_mconv ....................... Passed 0.01 sec +17/52 Test #17: test_mconv ....................... Passed 0.02 sec Start 18: minc_long_attr_10k -18/52 Test #18: minc_long_attr_10k ............... Passed 0.07 sec +18/52 Test #18: minc_long_attr_10k ............... Passed 0.08 sec Start 19: minc_long_attr_100k -19/52 Test #19: minc_long_attr_100k .............. Passed 0.06 sec +19/52 Test #19: minc_long_attr_100k .............. Passed 0.08 sec Start 20: minc_long_attr_1m -20/52 Test #20: minc_long_attr_1m ................ Passed 0.06 sec +20/52 Test #20: minc_long_attr_1m ................ Passed 0.09 sec Start 21: minc_conversion -21/52 Test #21: minc_conversion .................. Passed 0.06 sec +21/52 Test #21: minc_conversion .................. Passed 0.09 sec Start 22: volume_test-1 -22/52 Test #22: volume_test-1 .................... Passed 1.35 sec +22/52 Test #22: volume_test-1 .................... Passed 1.44 sec Start 23: volume_multidim_test -23/52 Test #23: volume_multidim_test ............. Passed 0.84 sec +23/52 Test #23: volume_multidim_test ............. Passed 0.66 sec Start 24: test_xfm_1 -24/52 Test #24: test_xfm_1 ....................... Passed 0.03 sec +24/52 Test #24: test_xfm_1 ....................... Passed 0.02 sec Start 25: test_xfm_2 25/52 Test #25: test_xfm_2 ....................... Passed 0.02 sec Start 26: test_xfm_3 -26/52 Test #26: test_xfm_3 ....................... Passed 0.05 sec +26/52 Test #26: test_xfm_3 ....................... Passed 0.04 sec Start 27: copy_xfm -27/52 Test #27: copy_xfm ......................... Passed 0.03 sec +27/52 Test #27: copy_xfm ......................... Passed 0.04 sec Start 28: verify_xfm_1 28/52 Test #28: verify_xfm_1 ..................... Passed 0.03 sec Start 29: verify_xfm_float 29/52 Test #29: verify_xfm_float ................. Passed 0.02 sec Start 30: verify_xfm_short -30/52 Test #30: verify_xfm_short ................. Passed 0.04 sec +30/52 Test #30: verify_xfm_short ................. Passed 0.03 sec Start 31: verify_xfm_byte 31/52 Test #31: verify_xfm_byte .................. Passed 0.03 sec Start 32: verify_xfm_2 @@ -5640,47 +5674,47 @@ Start 33: test_arg_parse 33/52 Test #33: test_arg_parse ................... Passed 0.01 sec Start 34: minc2-convert-test -34/52 Test #34: minc2-convert-test ............... Passed 4.86 sec +34/52 Test #34: minc2-convert-test ............... Passed 8.96 sec Start 35: minc2-create-test-images -35/52 Test #35: minc2-create-test-images ......... Passed 0.09 sec +35/52 Test #35: minc2-create-test-images ......... Passed 0.10 sec Start 36: minc2-create-test-images-2 -36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.08 sec +36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.09 sec Start 37: minc2-large-attribute-10k 37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.03 sec Start 38: minc2-large-attribute-100k -38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.02 sec +38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.03 sec Start 39: minc2-large-attribute-1m -39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.03 sec +39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.04 sec Start 40: minc2-datatype-test -40/52 Test #40: minc2-datatype-test .............. Passed 2.24 sec +40/52 Test #40: minc2-datatype-test .............. Passed 3.39 sec Start 41: minc2-full-test -41/52 Test #41: minc2-full-test .................. Passed 0.61 sec +41/52 Test #41: minc2-full-test .................. Passed 0.96 sec Start 42: minc2-grpattr-test 42/52 Test #42: minc2-grpattr-test ............... Passed 0.02 sec Start 43: minc2-hyper-test-2 -43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.08 sec +43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.09 sec Start 44: minc2-hyper-test -44/52 Test #44: minc2-hyper-test ................. Passed 0.03 sec +44/52 Test #44: minc2-hyper-test ................. Passed 0.04 sec Start 45: minc2-label-test 45/52 Test #45: minc2-label-test ................. Passed 0.02 sec Start 46: minc2-multires-test -46/52 Test #46: minc2-multires-test .............. Passed 3.09 sec +46/52 Test #46: minc2-multires-test .............. Passed 5.30 sec Start 47: minc2-record-test -47/52 Test #47: minc2-record-test ................ Passed 0.04 sec +47/52 Test #47: minc2-record-test ................ Passed 0.05 sec Start 48: minc2-slice-test 48/52 Test #48: minc2-slice-test ................. Passed 0.02 sec Start 49: minc2-valid-test -49/52 Test #49: minc2-valid-test ................. Passed 0.02 sec +49/52 Test #49: minc2-valid-test ................. Passed 0.03 sec Start 50: minc2-vector_dimension-test -50/52 Test #50: minc2-vector_dimension-test ...... Passed 0.65 sec +50/52 Test #50: minc2-vector_dimension-test ...... Passed 0.79 sec Start 51: minc2-volprops-test 51/52 Test #51: minc2-volprops-test .............. Passed 0.01 sec Start 52: minc2-leak-test -52/52 Test #52: minc2-leak-test .................. Passed 13.48 sec +52/52 Test #52: minc2-leak-test .................. Passed 16.54 sec 100% tests passed, 0 tests failed out of 52 -Total Test time (real) = 29.08 sec +Total Test time (real) = 40.23 sec make[2]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.03' create-stamp debian/debhelper-build-stamp @@ -5689,7 +5723,7 @@ dh_testroot dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/progress.marks @@ -5698,9 +5732,9 @@ make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/depend make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' @@ -5719,369 +5753,368 @@ make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-metadata.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_long_attr.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/mincapi.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-volprops-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-metadata.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images-2.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-volprops-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_tst.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/test_mconv.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-leak-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_long_attr.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images-2.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/test_mconv.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-record-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/mincapi.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 61%] Built target icv_dim +[ 61%] Built target minc_long_attr +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend +[ 62%] Built target mincapi +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 62%] Built target minc2-read-metadata make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-grpattr-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend [ 63%] Built target minc2-volprops-test +[ 64%] Built target minc2-read-metadata +[ 65%] Built target icv_dim make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend -[ 64%] Built target minc2-create-test-images-2 -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-record-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-create-test-images.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 65%] Built target minc2-leak-test -[ 66%] Built target minc_long_attr +[ 66%] Built target test_mconv make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend +[ 68%] Built target minc2-leak-test +[ 68%] Built target minc2-create-test-images-2 make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 67%] Built target minc_tst -[ 68%] Built target mincapi -[ 69%] Built target test_mconv -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend +[ 69%] Built target minc2-record-test make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'ezminc/CMakeFiles/minc_io.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 69%] Built target minc2-grpattr-test -[ 70%] Built target minc2-record-test +[ 70%] Built target minc2-create-test-images +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend +[ 70%] Built target minc2-grpattr-test make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend -[ 71%] Built target minc2-create-test-images +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= +[ 71%] Built target minc2-hyper-test +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= +[ 72%] Built target minc_io +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= -[ 72%] Built target minc2-hyper-test -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend -[ 73%] Built target minc_io make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/copy_xfm.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/volume_test.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 72%] Built target copy_xfm +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +[ 73%] Built target volume_test make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/volume_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/copy_xfm.dir/build'. +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 73%] Built target copy_xfm -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -[ 74%] Built target volume_test -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/icv.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_tst.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_types.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/icv.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_vec.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_types.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_dim1.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_fillvalue.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 75%] Built target icv_vec -[ 76%] Built target icv_dim1 -[ 77%] Built target icv +[ 74%] Built target minc_tst +[ 75%] Built target icv +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +[ 76%] Built target icv_vec make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend +[ 77%] Built target minc_types make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend +[ 78%] Built target icv_dim1 make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend -[ 78%] Built target minc_types -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend [ 78%] Built target icv_fillvalue -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-label-test.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-datatype-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-convert-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-large-attribute.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-label-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-datatype-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 79%] Built target minc2-datatype-test -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= -[ 80%] Built target minc2-convert-test -make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/test_arg_parse.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= +[ 79%] Built target minc2-convert-test +[ 80%] Built target minc2-label-test +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend [ 81%] Built target minc2-large-attribute -[ 82%] Built target minc2-label-test +make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend +[ 82%] Built target minc2-datatype-test make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-full-test.dir/build'. -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.03/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= -[ 83%] Built target test_arg_parse -make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend -[ 84%] Built target minc2-full-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/test_xfm.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/test_arg_parse.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-vector_dimension-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/test_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/verify_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 83%] Built target test_arg_parse +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/create_grid_xfm.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-full-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test-2.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/create_grid_xfm.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 85%] Built target test_xfm +[ 84%] Built target test_xfm +make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend +[ 85%] Built target verify_xfm +[ 86%] Built target minc2-full-test +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend -[ 87%] Built target verify_xfm [ 87%] Built target create_grid_xfm make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend -[ 88%] Built target minc2-vector_dimension-test +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.03/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.03/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= -[ 89%] Built target minc2-hyper-test-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-multires-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/icv_range.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-multires-test.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-hyper-test-2.dir/build'. +make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-vector_dimension-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-slice-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' +[ 88%] Built target minc2-multires-test +[ 89%] Built target icv_range +[ 90%] Built target minc2-hyper-test-2 +[ 91%] Built target minc2-vector_dimension-test +[ 92%] Built target minc2-slice-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-valid-test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 90%] Built target icv_range -[ 92%] Built target minc2-slice-test -[ 92%] Built target minc2-multires-test -[ 93%] Built target minc2-valid-test make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'testdir/CMakeFiles/minc2-read-rgb.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' @@ -6089,35 +6122,36 @@ make[3]: Nothing to be done for 'testdir/CMakeFiles/minc_conversion.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_msq_dist.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_avg.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_avg.dir/build'. +make[3]: Nothing to be done for 'testdir/CMakeFiles/multidim_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/trilinear_resample.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/volume_msq_dist.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 94%] Built target minc_conversion make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/create_grid_file.dir/build'. +make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 95%] Built target volume_msq_dist -[ 95%] Built target minc2-read-rgb make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'testdir/CMakeFiles/multidim_test.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/trilinear_resample.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 96%] Built target volume_avg -[ 97%] Built target trilinear_resample make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build'. +make[3]: Nothing to be done for 'ezminc/examples/CMakeFiles/create_grid_file.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build'. make[3]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' -[ 97%] Built target multidim_test -[ 98%] Built target create_grid_file -[ 99%] Built target ezminc_rw_test +[ 92%] Built target minc2-read-rgb +[ 93%] Built target minc2-valid-test +[ 94%] Built target minc_conversion +[ 95%] Built target volume_avg +[ 95%] Built target multidim_test +[ 96%] Built target volume_msq_dist +[ 97%] Built target create_grid_file +[ 98%] Built target trilinear_resample [100%] Built target ezminc_rw_test2 +[100%] Built target ezminc_rw_test make[2]: Leaving directory '/build/libminc-2.4.03/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall @@ -6189,28 +6223,30 @@ dh_strip dh_makeshlibs dh_shlibdeps -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 were not linked against libz.so.1 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 were not linked against libsz.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 were not linked against libdl.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 were not linked against libdl.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 were not linked against libz.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc2.so.5.2.0 debian/libminc2-5.2.0/usr/lib/x86_64-linux-gnu/libminc_io.so.5.2.0 were not linked against libsz.so.2 (they use none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb +dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-2_amd64.deb'. dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-2_amd64.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-2_amd64.deb'. -dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libminc_2.4.03-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/27245/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/25129 and its subdirectories -I: Current time: Wed Jan 12 19:13:32 -12 2022 -I: pbuilder-time-stamp: 1642058012 +I: removing directory /srv/workspace/pbuilder/27245 and its subdirectories +I: Current time: Fri Dec 11 14:52:19 +14 2020 +I: pbuilder-time-stamp: 1607647939