Diff of the two buildlogs: -- --- b1/build.log 2021-07-20 17:28:57.030001868 +0000 +++ b2/build.log 2021-07-20 17:33:24.303991105 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Aug 22 11:47:49 -12 2022 -I: pbuilder-time-stamp: 1661212069 +I: Current time: Wed Jul 21 07:28:58 +14 2021 +I: pbuilder-time-stamp: 1626802138 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Fri Jan 4 20:39:37 2019 -12 +gpgv: Signature made Sat Jan 5 22:39:37 2019 +14 gpgv: using RSA key 3F464391498FE874BDB5D98F2124AA1983785C90 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./octave-nan_3.1.4-5.dsc @@ -31,136 +31,170 @@ dpkg-source: info: applying workaround-for-mkoctfile-bug.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/18077/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='8e277d9e81d64a089cf2a7ae96933c80' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='18077' - PS1='# ' - PS2='> ' + INVOCATION_ID=b545f258dad748e4862fc444ce9c58b0 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=53120 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.aCil1MJXRZ/pbuilderrc_Tea6 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.aCil1MJXRZ/b1 --logfile b1/build.log octave-nan_3.1.4-5.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.aCil1MJXRZ/pbuilderrc_WnQ8 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.aCil1MJXRZ/b2 --logfile b2/build.log octave-nan_3.1.4-5.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 5.10.0-0.bpo.7-amd64 #1 SMP Debian 5.10.40-1~bpo10+1 (2021-06-04) x86_64 GNU/Linux + Linux i-capture-the-hostname 4.19.0-17-amd64 #1 SMP Debian 4.19.194-2 (2021-06-21) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 9 02:46 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/18077/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 21 07:29 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 7 22:24 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -552,7 +586,7 @@ Get: 350 http://deb.debian.org/debian buster/main amd64 dh-octave all 0.6.2 [19.9 kB] Get: 351 http://deb.debian.org/debian buster/main amd64 libsvm3 amd64 3.21+ds-1.2 [41.6 kB] Get: 352 http://deb.debian.org/debian buster/main amd64 libsvm-dev amd64 3.21+ds-1.2 [41.9 kB] -Fetched 128 MB in 2s (67.2 MB/s) +Fetched 128 MB in 2s (54.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -2007,7 +2041,7 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/octave-nan-3.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/octave-nan-3.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package octave-nan dpkg-buildpackage: info: source version 3.1.4-5 dpkg-buildpackage: info: source distribution unstable @@ -2058,14 +2092,14 @@ /usr/bin/mkoctfile --verbose --mex -lgomp "kth_element.cpp" /usr/bin/mkoctfile --verbose --mex -lgomp "sumskipnan_mex.cpp" /usr/bin/mkoctfile --verbose --mex -lgomp "str2array.cpp" +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG sumskipnan_mex.cpp -o sumskipnan_mex.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG covm_mex.cpp -o covm_mex.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG histo_mex.cpp -o histo_mex.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG kth_element.cpp -o kth_element.o g++ -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -DHAVE_EXTERNAL_LIBSVM -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -c tron.cpp g++ -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -DHAVE_EXTERNAL_LIBSVM -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -c linear.cpp /usr/bin/mkoctfile --verbose -o "svm_model_octave.o" -c "svm_model_matlab.c" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG histo_mex.cpp -o histo_mex.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG sumskipnan_mex.cpp -o sumskipnan_mex.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG kth_element.cpp -o kth_element.o /usr/bin/mkoctfile --verbose --mex -lgomp "xptopen.cpp" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG covm_mex.cpp -o covm_mex.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG str2array.cpp -o str2array.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -DHAVE_EXTERNAL_LIBSVM -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp svm_model_matlab.c -o svm_model_octave.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG xptopen.cpp -o xptopen.o @@ -2103,10 +2137,6 @@ svm_model_matlab.c:370:11: warning: variable 'sc' set but not used [-Wunused-but-set-variable] int sr, sc, elements; ^~ -xptopen.cpp: In function 'void mexFunction(int, mxArray**, int, const mxArray**)': -xptopen.cpp:510:9: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fread(data, bi[NS], M, fid); - ~~~~~^~~~~~~~~~~~~~~~~~~~~~ linear.cpp: In function 'model* load_model(const char*)': linear.cpp:1938:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%80s",cmd); @@ -2132,12 +2162,16 @@ linear.cpp:2011:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp, "\n"); ~~~~~~^~~~~~~~~~ +xptopen.cpp: In function 'void mexFunction(int, mxArray**, int, const mxArray**)': +xptopen.cpp:510:9: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fread(data, bi[NS], M, fid); + ~~~~~^~~~~~~~~~~~~~~~~~~~~~ +g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o kth_element.mex kth_element.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex -lgomp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -DHAVE_EXTERNAL_LIBSVM -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -v svmtrain_mex.cpp svm_model_octave.o -lsvm -o svmtrain_mex.mex /usr/bin/mkoctfile --verbose --mex -lgomp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -DHAVE_EXTERNAL_LIBSVM -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -v svmpredict_mex.cpp svm_model_octave.o -lsvm -o svmpredict_mex.mex g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -Wdate-time -fPIC -fopenmp -I. -DHAVE_EXTERNAL_LIBSVM -D_FORTIFY_SOURCE=2 -DMEX_DEBUG svmtrain_mex.cpp -o svmtrain_mex.o g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -Wdate-time -fPIC -fopenmp -I. -DHAVE_EXTERNAL_LIBSVM -D_FORTIFY_SOURCE=2 -DMEX_DEBUG svmpredict_mex.cpp -o svmpredict_mex.o g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o str2array.mex str2array.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro -g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o kth_element.mex kth_element.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro svmtrain_mex.cpp: In function 'void print_null(const char*)': svmtrain_mex.cpp:50:29: warning: unused parameter 's' [-Wunused-parameter] void print_null(const char *s) {} @@ -2155,8 +2189,8 @@ void mexFunction( int nlhs, mxArray *plhs[], ~~~~^~~~ g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o histo_mex.mex histo_mex.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro -g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -g -shared -Wl,-Bsymbolic -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -Wdate-time -fPIC -fopenmp -o svmtrain_mex.mex svm_model_octave.o svmtrain_mex.o -lgomp -lsvm -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -g -shared -Wl,-Bsymbolic -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -Wdate-time -fPIC -fopenmp -o svmpredict_mex.mex svm_model_octave.o svmpredict_mex.o -lgomp -lsvm -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro +g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -g -shared -Wl,-Bsymbolic -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wconversion -O2 -Wdate-time -fPIC -fopenmp -o svmtrain_mex.mex svm_model_octave.o svmtrain_mex.o -lgomp -lsvm -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o covm_mex.mex covm_mex.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o sumskipnan_mex.mex sumskipnan_mex.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro g++ -I/usr/include/octave-4.4.1/octave/.. -I/usr/include/octave-4.4.1/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/octave-nan-3.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -o xptopen.mex xptopen.o -lgomp -L/usr/lib/x86_64-linux-gnu/octave/4.4.1 -L/usr/lib/x86_64-linux-gnu -loctinterp -loctave -Wl,-z,relro @@ -2279,67 +2313,67 @@ Checking m files ... warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/zscore.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/var.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/sumsq.m shadows a built-in function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/std.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/spearman.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/skewness.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/ranks.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/range.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/quantile.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/prctile.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/moment.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/median.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/meansq.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/mean.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/mad.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/kurtosis.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/iqr.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/detrend.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/cov.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/corrcoef.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 warning: function /build/octave-nan-3.1.4/debian/octave-nan/usr/share/octave/packages/nan-3.1.4/center.m shadows a core library function warning: called from - /tmp/filewNpIG4 at line 12 column 1 + /tmp/fileUUpBWo at line 12 column 1 [inst/nansum.m] >>>>> /build/octave-nan-3.1.4/inst/nansum.m ***** assert(nansum(NaN),0) @@ -2440,18 +2474,18 @@ Level: |(0) naive-dou |(1) naive-ext |(2) kahan-dou | (3) kahan-ext error: |N*2^-52 |N*2^-64 | 2^-52 | 2^-64 COVM_MEX: -time: |0.068934 |0.170084 | 0.176665 | 0.149967COVM_MEX: -time: |0.251889 | -(0) | 0 | 605.719 | 604.982 | 605.14 -(1) | 605.719 | 0 | 0.01024 | 0.00512 -(2) | 604.982 | 0.01024 | 0 | 0.00512 -(3) | 605.14 | 0.00512 | 0.00512 | 0 +time: |0.048985 |0.194933 | 0.185896 | 0.190337COVM_MEX: +time: |0.186482 | +(0) | 0 | 520.625 | 520.625 | 520.625 +(1) | 520.625 | 0 | 0 | 0 +(2) | 520.625 | 0 | 0 | 0 +(3) | 520.625 | 0 | 0 | 0 SUMSKIPNAN_MEX: -time: |0.024453 |0.122763 | 0.081340 | 0.158423time: |0.006661 | -(0) | 0 |7.44825e-11 |7.44825e-11 |7.44825e-11 -(1) |7.44825e-11 | 0 | 0 | 0 -(2) |7.44825e-11 | 0 | 0 | 0 -(3) |7.44825e-11 | 0 | 0 | 0 +time: |0.052850 |0.182703 | 0.181910 | 0.182452time: |0.002243 | +(0) | 0 |8.36747e-11 |8.32579e-11 |8.32579e-11 +(1) |8.36747e-11 | 0 |2.32831e-15 |2.32831e-15 +(2) |8.32579e-11 |2.32831e-15 | 0 | 0 +(3) |8.32579e-11 |2.32831e-15 | 0 | 0 Testing test_train_sc.m REG REG2 @@ -2491,61 +2525,61 @@ Columns 1 through 8: - 0.61600 0.59200 0.73800 0.72700 0.69500 0.75000 0.75500 0.74800 + 0.58200 0.58300 0.73900 0.73500 0.73100 0.73800 0.75600 0.76400 Columns 9 through 16: - 0.72500 0.75800 0.73200 0.66100 0.66100 0.61200 0.69900 0.69400 + 0.77700 0.73600 0.74300 0.64200 0.62500 0.58000 0.67900 0.65600 Columns 17 through 22: - 0.75500 0.72800 0.62300 0.73500 0.76000 0.74200 + 0.76800 0.74400 0.65800 0.75600 0.74600 0.73300 m = Columns 1 through 8: - 0.77400 0.75500 0.75900 0.78000 0.75500 0.76200 0.76100 0.76100 + 0.77300 0.77800 0.77700 0.77900 0.76400 0.75400 0.75800 0.77900 Columns 9 through 16: - 0.73100 0.77300 0.75000 0.77000 0.79000 0.77000 0.59100 0.57100 + 0.78900 0.75300 0.75400 0.77200 0.76500 0.76700 0.58800 0.52700 Columns 17 through 22: - 0.76400 0.74000 0.73700 0.76400 0.76600 0.76800 + 0.76200 0.75700 0.75600 0.77400 0.73800 0.76300 m = Columns 1 through 8: - 0.62500 0.62400 0.73800 0.72700 0.69500 0.75000 0.75500 0.74800 + 0.61900 0.62500 0.73900 0.73500 0.73100 0.73800 0.75600 0.76400 Columns 9 through 16: - 0.72500 0.75800 0.73200 0.75600 0.74600 0.75500 0.69900 0.62900 + 0.77700 0.73600 0.74300 0.74300 0.74400 0.76700 0.67900 0.61300 Columns 17 through 22: - 0.75500 0.72800 0.71100 0.73500 0.76000 0.74200 + 0.76800 0.74400 0.74000 0.75600 0.74600 0.73300 Testing test_xval.m - SVM:LIB 99 19.19 -0.61+- 0.00 - REG 99 92.93 0.86+- 0.17 - MDA 49 77.55 0.55+- 0.20 - MD2 49 63.27 0.27+- 0.18 - QDA 49 18.37 -0.62+- 0.00 - QDA2 49 16.33 -0.66+- 0.00 - LD2 49 89.80 0.80+- 0.23 - LD3 49 89.80 0.80+- 0.23 - LD4 49 89.80 0.80+- 0.23 - LD5 49 75.51 0.51+- 0.20 - LD6 49 75.51 0.51+- 0.20 - NBC 49 89.80 0.80+- 0.23 - aNBC 49 89.80 0.80+- 0.23 -WienerHopf 49 89.80 0.80+- 0.23 -LDA/GSVD 99 92.93 0.86+- 0.17 -MDA/GSVD 99 86.87 0.74+- 0.16 + SVM:LIB 99 25.25 -0.49+- 0.00 + REG 99 90.91 0.82+- 0.16 + MDA 49 85.71 0.72+- 0.22 + MD2 49 81.63 0.63+- 0.21 + QDA 49 77.55 0.55+- 0.20 + QDA2 49 83.67 0.67+- 0.22 + LD2 49 93.88 0.88+- 0.24 + LD3 49 93.88 0.88+- 0.24 + LD4 49 93.88 0.88+- 0.24 + LD5 49 71.43 0.43+- 0.18 + LD6 49 71.43 0.43+- 0.18 + NBC 49 93.88 0.88+- 0.24 + aNBC 49 93.88 0.88+- 0.24 +WienerHopf 49 93.88 0.88+- 0.24 +LDA/GSVD 99 90.91 0.82+- 0.16 +MDA/GSVD 99 85.86 0.72+- 0.16 warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations @@ -2647,7 +2681,7 @@ warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations -LDA/sparse 99 92.93 0.86+- 0.17 +LDA/sparse 99 90.91 0.82+- 0.16 warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations @@ -2749,66 +2783,66 @@ warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations warning: sparse LDA is sensitive to linear transformations -MDA/sparse 99 91.92 0.84+- 0.16 - PLA 99 51.52 0.02+- 0.03 - LMS 99 51.52 0.02+- 0.03 -LDA/DELETION 99 92.93 0.86+- 0.17 -MDA/DELETION 99 86.87 0.74+- 0.16 -NBC/DELETION 99 90.91 0.82+- 0.16 -RDA/DELETION 99 92.93 0.86+- 0.17 -REG/DELETION 99 92.93 0.86+- 0.17 - RDA 49 89.80 0.80+- 0.23 - GDBC 49 77.55 0.55+- 0.20 - SVM 99 81.82 0.63+- 0.15 +MDA/sparse 99 89.90 0.80+- 0.16 + PLA 99 50.51 0.00+- 0.00 + LMS 99 50.51 0.00+- 0.00 +LDA/DELETION 99 90.91 0.82+- 0.16 +MDA/DELETION 99 85.86 0.72+- 0.16 +NBC/DELETION 99 88.89 0.78+- 0.16 +RDA/DELETION 99 90.91 0.82+- 0.16 +REG/DELETION 99 90.91 0.82+- 0.16 + RDA 49 93.88 0.88+- 0.24 + GDBC 49 87.76 0.76+- 0.23 + SVM 99 79.80 0.59+- 0.14 RBF 100 50.00 0.00+- 0.00 - PSVM 49 48.98 0.00+- 0.00 + PSVM 49 46.94 -0.04+- 0.00 SVM11 100 50.00 0.00+- 0.00 Length of label vector does not match # of instances. -SVM:LIN0 99 81.82 0.63+- 0.15 -SVM:LIN1 99 79.80 0.59+- 0.14 -SVM:LIN2 99 80.81 0.61+- 0.15 -SVM:LIN3 99 80.81 0.61+- 0.15 +SVM:LIN0 99 79.80 0.59+- 0.14 +SVM:LIN1 99 74.75 0.49+- 0.13 +SVM:LIN2 99 74.75 0.49+- 0.13 +SVM:LIN3 99 74.75 0.49+- 0.13 WINNOW 99 55.56 0.10+- 0.06 - SVM:LIB 99 19.19 -0.61+- 0.00 - REG 99 92.93 0.86+- 0.17 - MDA 49 77.55 0.55+- 0.20 - MD2 49 63.27 0.27+- 0.18 - QDA 49 18.37 -0.62+- 0.00 - QDA2 49 16.33 -0.66+- 0.00 - LD2 49 89.80 0.80+- 0.23 - LD3 49 89.80 0.80+- 0.23 - LD4 49 89.80 0.80+- 0.23 - LD5 49 75.51 0.51+- 0.20 - LD6 49 75.51 0.51+- 0.20 - NBC 49 89.80 0.80+- 0.23 - aNBC 49 89.80 0.80+- 0.23 -WienerHopf 49 89.80 0.80+- 0.23 -LDA/GSVD 99 92.93 0.86+- 0.17 -MDA/GSVD 99 86.87 0.74+- 0.16 -LDA/sparse 99 92.93 0.86+- 0.17 -MDA/sparse 99 91.92 0.84+- 0.16 - PLA 99 51.52 0.02+- 0.03 - LMS 99 51.52 0.02+- 0.03 -LDA/DELETION 99 92.93 0.86+- 0.17 -MDA/DELETION 99 86.87 0.74+- 0.16 -NBC/DELETION 99 90.91 0.82+- 0.16 -RDA/DELETION 99 92.93 0.86+- 0.17 -REG/DELETION 99 92.93 0.86+- 0.17 - RDA 49 89.80 0.80+- 0.23 - GDBC 49 77.55 0.55+- 0.20 - SVM 99 81.82 0.63+- 0.15 + SVM:LIB 99 25.25 -0.49+- 0.00 + REG 99 90.91 0.82+- 0.16 + MDA 49 85.71 0.72+- 0.22 + MD2 49 81.63 0.63+- 0.21 + QDA 49 77.55 0.55+- 0.20 + QDA2 49 83.67 0.67+- 0.22 + LD2 49 93.88 0.88+- 0.24 + LD3 49 93.88 0.88+- 0.24 + LD4 49 93.88 0.88+- 0.24 + LD5 49 71.43 0.43+- 0.18 + LD6 49 71.43 0.43+- 0.18 + NBC 49 93.88 0.88+- 0.24 + aNBC 49 93.88 0.88+- 0.24 +WienerHopf 49 93.88 0.88+- 0.24 +LDA/GSVD 99 90.91 0.82+- 0.16 +MDA/GSVD 99 85.86 0.72+- 0.16 +LDA/sparse 99 90.91 0.82+- 0.16 +MDA/sparse 99 89.90 0.80+- 0.16 + PLA 99 50.51 0.00+- 0.00 + LMS 99 50.51 0.00+- 0.00 +LDA/DELETION 99 90.91 0.82+- 0.16 +MDA/DELETION 99 85.86 0.72+- 0.16 +NBC/DELETION 99 88.89 0.78+- 0.16 +RDA/DELETION 99 90.91 0.82+- 0.16 +REG/DELETION 99 90.91 0.82+- 0.16 + RDA 49 93.88 0.88+- 0.24 + GDBC 49 87.76 0.76+- 0.23 + SVM 99 79.80 0.59+- 0.14 RBF 100 50.00 0.00+- 0.00 - PSVM 49 48.98 0.00+- 0.00 + PSVM 49 46.94 -0.04+- 0.00 SVM11 100 50.00 0.00+- 0.00 SVM:LIN4 failed -SVM:LIN0 99 81.82 0.63+- 0.15 -SVM:LIN1 99 79.80 0.59+- 0.14 -SVM:LIN2 99 80.81 0.61+- 0.15 -SVM:LIN3 99 80.81 0.61+- 0.15 +SVM:LIN0 99 79.80 0.59+- 0.14 +SVM:LIN1 99 74.75 0.49+- 0.13 +SVM:LIN2 99 74.75 0.49+- 0.13 +SVM:LIN3 99 74.75 0.49+- 0.13 WINNOW 99 55.56 0.10+- 0.06 error: 'fid' undefined near line 157 column 14 error: called from - /tmp/filewNpIG4 at line 157 column 5 + /tmp/fileUUpBWo at line 157 column 5 Summary: 32 tests, 32 passed, 0 known failures, 0 skipped dh_octave_substvar -O--buildsystem=octave dh_installdocs -O--buildsystem=octave @@ -2827,8 +2861,8 @@ dh_strip -O--buildsystem=octave dh_makeshlibs -O--buildsystem=octave dh_shlibdeps -O--buildsystem=octave -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/covm_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/histo_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/train.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/xptopen.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/sumskipnan_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmtrain_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmpredict_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/str2array.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/kth_element.mex were not linked against libpthread.so.0 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/covm_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/histo_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/train.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/xptopen.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/sumskipnan_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmtrain_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmpredict_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/str2array.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/kth_element.mex were not linked against liboctave.so.6 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/covm_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/xptopen.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/histo_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/str2array.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmtrain_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/sumskipnan_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/kth_element.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmpredict_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/train.mex were not linked against liboctave.so.6 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/covm_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/xptopen.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/histo_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/str2array.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmtrain_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/sumskipnan_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/kth_element.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/svmpredict_mex.mex debian/octave-nan/usr/lib/x86_64-linux-gnu/octave/packages/nan-3.1.4/x86_64-pc-linux-gnu-api-v52/train.mex were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb -O--buildsystem=octave dh_gencontrol -O--buildsystem=octave dpkg-gencontrol: warning: package octave-nan: substitution variable ${octave:Upstream-Description} unused, but is defined @@ -2843,12 +2877,14 @@ dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/53120/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/18077 and its subdirectories -I: Current time: Mon Aug 22 11:51:57 -12 2022 -I: pbuilder-time-stamp: 1661212317 +I: removing directory /srv/workspace/pbuilder/53120 and its subdirectories +I: Current time: Wed Jul 21 07:33:23 +14 2021 +I: pbuilder-time-stamp: 1626802403