Diff of the two buildlogs: -- --- b1/build.log 2021-12-08 15:19:05.368528056 +0000 +++ b2/build.log 2021-12-08 15:55:59.775293130 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 8 02:44:25 -12 2021 -I: pbuilder-time-stamp: 1638974665 +I: Current time: Wed Jan 11 11:42:15 +14 2023 +I: pbuilder-time-stamp: 1673386935 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Mon Nov 12 00:48:37 2018 -12 +gpgv: Signature made Tue Nov 13 02:48:37 2018 +14 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./openbabel_2.4.1+dfsg-3.dsc @@ -33,136 +33,170 @@ dpkg-source: info: applying pybel_indexerror.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1990442/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='06b9281416404391a98692de01da467c' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1990442' - PS1='# ' - PS2='> ' + INVOCATION_ID=0f0a60658b6e4cbcab965bd237783096 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2315527 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.UaxcRA3fgv/pbuilderrc_YaFA --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.UaxcRA3fgv/b1 --logfile b1/build.log openbabel_2.4.1+dfsg-3.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.UaxcRA3fgv/pbuilderrc_DWM1 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.UaxcRA3fgv/b2 --logfile b2/build.log openbabel_2.4.1+dfsg-3.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Nov 7 09:58 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/1990442/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jan 11 11:42 sh -> bash + lrwxrwxrwx 1 root root 4 Dec 11 18:21 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -489,7 +523,7 @@ Get: 265 http://deb.debian.org/debian buster/main amd64 python-all-dev amd64 2.7.16-1 [1068 B] Get: 266 http://deb.debian.org/debian buster/main amd64 python-pkg-resources all 40.8.0-1 [182 kB] Get: 267 http://deb.debian.org/debian buster/main amd64 python-setuptools all 40.8.0-1 [382 kB] -Fetched 183 MB in 3s (52.7 MB/s) +Fetched 183 MB in 2s (79.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -1596,7 +1630,8 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/openbabel-2.4.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openbabel_2.4.1+dfsg-3_source.changes +hostname: Name or service not known +I: Running cd /build/openbabel-2.4.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../openbabel_2.4.1+dfsg-3_source.changes dpkg-buildpackage: info: source package openbabel dpkg-buildpackage: info: source version 2.4.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable @@ -1740,7 +1775,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/openbabel-2.4.1+dfsg' dh_auto_build - cd builddir && make -j15 "INSTALL=install --strip-program=true" + cd builddir && make -j16 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' /usr/bin/cmake -S/build/openbabel-2.4.1+dfsg -B/build/openbabel-2.4.1+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/openbabel-2.4.1+dfsg/builddir/CMakeFiles /build/openbabel-2.4.1+dfsg/builddir/CMakeFiles/progress.marks @@ -1757,99 +1792,99 @@ make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_io.o -[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiisot.o -[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichican2.o -[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicans.o [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.o [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.o -[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o +[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichican2.o +[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicano.o +[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiisot.o +[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichi_bns.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichi_bns.c +[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicans.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichi_io.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichi_io.c +[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o +[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichican2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichican2.c +[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichicano.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichicano.c cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichicans.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichicans.c -[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.o -[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicano.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichi_bns.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichi_bns.c cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiisot.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiisot.c cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichilnct.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichilnct.c +[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimak2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimak2.c -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimap1.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimap1.c -[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichicano.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichicano.c -[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimake.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimake.c -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimap2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimap2.c +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimap1.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimap1.c Scanning dependencies of target openbabel -[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.o +[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.o make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimap2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimap2.c +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichimap4.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichimap4.c -[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichinorm.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichinorm.c -[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.o -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiparm.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiparm.c -[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/alias.o +[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/alias.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/alias.o -c /build/openbabel-2.4.1+dfsg/src/alias.cpp -[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.o +[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/atom.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/atom.o -c /build/openbabel-2.4.1+dfsg/src/atom.cpp +[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiparm.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiparm.c +[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiprt1.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiprt1.c -[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt2.o +[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt2.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiprt2.o -c 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CMakeFiles/inchi.dir/ichiprt3.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiprt3.c -[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiqueu.o +[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiqueu.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiqueu.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiqueu.c -[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiread.o +[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiread.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichiring.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichiring.c -[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o +[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr1.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr1.c -[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o +[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr2.c -[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o +[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr3.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr3.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.o +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr4.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr4.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o +[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/base.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/base.o -c /build/openbabel-2.4.1+dfsg/src/base.cpp +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr5.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr5.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.o +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr6.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr6.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.o +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichirvr7.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichirvr7.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.o +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichisort.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichisort.c -[ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichister.o +[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/bitvec.o -c /build/openbabel-2.4.1+dfsg/src/bitvec.cpp +[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichister.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichister.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichister.c -[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.o +[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ichitaut.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ichitaut.c -[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.o +[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ikey_base26.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ikey_base26.c -[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.o +[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/ikey_dll.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/ikey_dll.c -[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.o +[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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-DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/inchi_dll_a2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/inchi_dll_a2.c -[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.o +[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/inchi_dll_main.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/inchi_dll_main.c -[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/runichi.o +[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/runichi.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/runichi.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/runichi.c -[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o +[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/sha2.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/sha2.c -[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.o +[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/strutil.o -c 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-D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/bond.o -c /build/openbabel-2.4.1+dfsg/src/bond.cpp +[ 9%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/util.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -fPIC -o CMakeFiles/inchi.dir/util.o -c /build/openbabel-2.4.1+dfsg/src/formats/libinchi/util.c [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/bondtyper.o -c /build/openbabel-2.4.1+dfsg/src/bondtyper.cpp [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/builder.o @@ -1880,6 +1915,18 @@ cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 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CMakeFiles/openbabel.dir/griddata.o -c /build/openbabel-2.4.1+dfsg/src/griddata.cpp +[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/isomorphism.o -c /build/openbabel-2.4.1+dfsg/src/isomorphism.cpp +[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/kekulize.o -c /build/openbabel-2.4.1+dfsg/src/kekulize.cpp +[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/locale.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 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-DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/obconversion.o -c /build/openbabel-2.4.1+dfsg/src/obconversion.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.o @@ -1950,6 +1978,13 @@ cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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CMakeFiles/inchi.dir/inchi_dll_main.o CMakeFiles/inchi.dir/runichi.o CMakeFiles/inchi.dir/sha2.o CMakeFiles/inchi.dir/strutil.o CMakeFiles/inchi.dir/util.o +/usr/bin/ranlib libinchi.a +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 15%] Built target inchi [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread 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CMakeFiles/openbabel.dir/stereo/cistrans.o -c /build/openbabel-2.4.1+dfsg/src/stereo/cistrans.cpp [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/tetrahedral.o -c /build/openbabel-2.4.1+dfsg/src/stereo/tetrahedral.cpp +[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/perception.o -c /build/openbabel-2.4.1+dfsg/src/stereo/perception.cpp [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/facade.o -c /build/openbabel-2.4.1+dfsg/src/stereo/facade.cpp -[ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/perception.o -c /build/openbabel-2.4.1+dfsg/src/stereo/perception.cpp [ 22%] Linking CXX shared library ../lib/libopenbabel.so cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,libopenbabel.so.5 -o ../lib/libopenbabel.so.5.0.0 CMakeFiles/openbabel.dir/alias.o CMakeFiles/openbabel.dir/atom.o CMakeFiles/openbabel.dir/base.o CMakeFiles/openbabel.dir/bitvec.o CMakeFiles/openbabel.dir/bond.o CMakeFiles/openbabel.dir/bondtyper.o CMakeFiles/openbabel.dir/builder.o CMakeFiles/openbabel.dir/canon.o CMakeFiles/openbabel.dir/chains.o CMakeFiles/openbabel.dir/chargemodel.o CMakeFiles/openbabel.dir/chiral.o CMakeFiles/openbabel.dir/data.o CMakeFiles/openbabel.dir/data_utilities.o CMakeFiles/openbabel.dir/descriptor.o CMakeFiles/openbabel.dir/fingerprint.o CMakeFiles/openbabel.dir/forcefield.o CMakeFiles/openbabel.dir/format.o CMakeFiles/openbabel.dir/generic.o CMakeFiles/openbabel.dir/graphsym.o CMakeFiles/openbabel.dir/grid.o CMakeFiles/openbabel.dir/griddata.o CMakeFiles/openbabel.dir/isomorphism.o CMakeFiles/openbabel.dir/kekulize.o CMakeFiles/openbabel.dir/locale.o CMakeFiles/openbabel.dir/matrix.o CMakeFiles/openbabel.dir/mcdlutil.o CMakeFiles/openbabel.dir/molchrg.o CMakeFiles/openbabel.dir/mol.o CMakeFiles/openbabel.dir/obconversion.o CMakeFiles/openbabel.dir/oberror.o CMakeFiles/openbabel.dir/obiter.o CMakeFiles/openbabel.dir/obutil.o CMakeFiles/openbabel.dir/op.o CMakeFiles/openbabel.dir/parsmart.o CMakeFiles/openbabel.dir/patty.o CMakeFiles/openbabel.dir/phmodel.o CMakeFiles/openbabel.dir/plugin.o CMakeFiles/openbabel.dir/pointgroup.o CMakeFiles/openbabel.dir/query.o CMakeFiles/openbabel.dir/rand.o CMakeFiles/openbabel.dir/residue.o CMakeFiles/openbabel.dir/ring.o CMakeFiles/openbabel.dir/rotamer.o CMakeFiles/openbabel.dir/rotor.o CMakeFiles/openbabel.dir/spectrophore.o CMakeFiles/openbabel.dir/tautomer.o CMakeFiles/openbabel.dir/tokenst.o CMakeFiles/openbabel.dir/transform.o CMakeFiles/openbabel.dir/typer.o CMakeFiles/openbabel.dir/obmolecformat.o CMakeFiles/openbabel.dir/conformersearch.o CMakeFiles/openbabel.dir/confsearch.o CMakeFiles/openbabel.dir/distgeom.o CMakeFiles/openbabel.dir/dlhandler_unix.o CMakeFiles/openbabel.dir/depict/depict.o CMakeFiles/openbabel.dir/depict/svgpainter.o CMakeFiles/openbabel.dir/math/matrix3x3.o CMakeFiles/openbabel.dir/math/spacegroup.o CMakeFiles/openbabel.dir/math/transform3d.o CMakeFiles/openbabel.dir/math/vector3.o CMakeFiles/openbabel.dir/math/align.o CMakeFiles/openbabel.dir/stereo/stereo.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o CMakeFiles/openbabel.dir/stereo/tetraplanar.o CMakeFiles/openbabel.dir/stereo/squareplanar.o CMakeFiles/openbabel.dir/stereo/cistrans.o CMakeFiles/openbabel.dir/stereo/tetrahedral.o CMakeFiles/openbabel.dir/stereo/perception.o CMakeFiles/openbabel.dir/stereo/facade.o -lm -ldl -lz @@ -2021,146 +2056,136 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 22%] Built target openbabel make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend -make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend -make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= -make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= -make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend -make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend -make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend -make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend +make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend -make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend +make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend +make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend +make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend +make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= +Scanning dependencies of target plugin_descriptors +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target plugin_fingerprints make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats 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/build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target plugin_forcefields +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= -Scanning dependencies of target xyzformat -Scanning dependencies of target yasaraformat +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= Scanning dependencies of target cmlreactformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target xtcformat -make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build -Scanning dependencies of target pdbqtformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target plugin_fingerprints make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target chemdrawcdx +Scanning dependencies of target xyzformat +Scanning dependencies of target xmlformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target cmlformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build -Scanning dependencies of target plugin_descriptors make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build Scanning dependencies of target viewmolformat +[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build +make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/cansmidescriptor.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build -Scanning dependencies of target chemdrawcdx -Scanning dependencies of target plugin_forcefields make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target cmlformat +[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target xmlformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 23%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxyzformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xyzformat.dir/xyzformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xyzformat.cpp -Scanning dependencies of target pcmodelformat make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build -[ 24%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/cmlreactformat.cpp -[ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o +make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build +[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o +[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o +Scanning dependencies of target plugin_ops make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/cmpdfilter.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/groupcontrib.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/filters.cpp +[ 23%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -c /build/openbabel-2.4.1+dfsg/src/fingerprints/finger2.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/cansmidescriptor.cpp -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build -make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build +make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target yasaraformat +[ 23%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.o +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 23%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o +make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldgaff.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxtcformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xtcformat.dir/xtcformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xtcformat.cpp make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 25%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.o -make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build -make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build +make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 25%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.o -[ 25%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.o +[ 24%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxtcformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xtcformat.dir/xtcformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xtcformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/viewmolformat.dir/viewmolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/viewmolformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlformat.dir/xml/cmlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/cmlformat.cpp -Scanning dependencies of target plugin_ops -[ 25%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldgaff.cpp -[ 25%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.o -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xmlformat.dir/xml/xmlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xmlformat.cpp -make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build -[ 25%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/cmlreactformat.cpp +[ 24%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.o +[ 24%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -c /build/openbabel-2.4.1+dfsg/src/formats/chemdrawcdx.cpp -[ 25%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.o -[ 25%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.o -[ 26%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xmlformat.dir/xml/xmlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xmlformat.cpp Scanning dependencies of target plugin_charges -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/yasaraformat.dir/yasaraformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/yasaraformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pcmodelformat.dir/pcmodelformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pcmodelformat.cpp +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pdbqtformat.dir/pdbqtformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.o +[ 24%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlformat.dir/xml/cmlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/cmlformat.cpp +[ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.o +[ 25%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addfilename.o -c /build/openbabel-2.4.1+dfsg/src/ops/addfilename.cpp -[ 26%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxyzformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xyzformat.dir/xyzformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xyzformat.cpp +[ 25%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.o +[ 25%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/yasaraformat.dir/yasaraformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/yasaraformat.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/viewmolformat.dir/viewmolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/viewmolformat.cpp +[ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/eem.o -c /build/openbabel-2.4.1+dfsg/src/charges/eem.cpp -[ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/cmpdfilter.cpp -[ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o +[ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/inchidescriptor.cpp +[ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addinindex.o -c /build/openbabel-2.4.1+dfsg/src/ops/addinindex.cpp -[ 26%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp +[ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/smartsdescriptors.cpp +[ 26%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp /build/openbabel-2.4.1+dfsg/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-2.4.1+dfsg/src/formats/yasaraformat.cpp:562:32: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] snprintf(&buffer[12], 4, "%4d",res->GetNum()); } @@ -2179,135 +2204,116 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 27%] Linking CXX shared module ../../lib/viewmolformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 27%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/groupcontrib.cpp -[ 27%] Linking CXX shared module ../../lib/yasaraformat.so +[ 26%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp +[ 26%] Linking CXX shared module ../../lib/yasaraformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= +Scanning dependencies of target pdbqtformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 27%] Built target viewmolformat -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= +[ 27%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pdbqtformat.dir/pdbqtformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp +[ 28%] Linking CXX shared module ../../lib/viewmolformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target outformat +[ 28%] Built target yasaraformat +make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= +[ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/addpolarh.cpp +Scanning dependencies of target pcmodelformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build -/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::ostream&, unsigned int)': -/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:334:46: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] - snprintf(type_name, sizeof(type_name), " %-3s", tmp); - ^~~~~~~ -In file included from /usr/include/stdio.h:873, - from /usr/include/c++/8/cstdio:42, - from /usr/include/c++/8/fstream:41, - from /build/openbabel-2.4.1+dfsg/include/openbabel/tokenst.h:28, - from /build/openbabel-2.4.1+dfsg/include/openbabel/base.h:29, - from /build/openbabel-2.4.1+dfsg/include/openbabel/atom.h:33, - from /build/openbabel-2.4.1+dfsg/include/openbabel/mol.h:42, - from /build/openbabel-2.4.1+dfsg/include/openbabel/obmolecformat.h:37, - from /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:24: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 - return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:351:54: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] - snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); - ^~~~~~~ -In file included from /usr/include/stdio.h:873, - from /usr/include/c++/8/cstdio:42, - from /usr/include/c++/8/fstream:41, - from /build/openbabel-2.4.1+dfsg/include/openbabel/tokenst.h:28, - from /build/openbabel-2.4.1+dfsg/include/openbabel/base.h:29, - from /build/openbabel-2.4.1+dfsg/include/openbabel/atom.h:33, - from /build/openbabel-2.4.1+dfsg/include/openbabel/mol.h:42, - from /build/openbabel-2.4.1+dfsg/include/openbabel/obmolecformat.h:37, - from /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:24: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 - return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - __bos (__s), __fmt, __va_arg_pack ()); - ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 27%] Built target yasaraformat +[ 28%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pcmodelformat.dir/pcmodelformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pcmodelformat.cpp +[ 28%] Linking CXX shared module ../../lib/xyzformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 28%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -c /build/openbabel-2.4.1+dfsg/src/fingerprints/finger3.cpp +[ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/gasteiger.o -c /build/openbabel-2.4.1+dfsg/src/charges/gasteiger.cpp +[ 28%] Linking CXX shared module ../../lib/xtcformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtcformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 28%] Linking CXX shared module ../lib/plugin_descriptors.so +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 28%] Built target viewmolformat +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= +[ 28%] Built target xyzformat make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= -[ 27%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.o -[ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/addpolarh.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/outformat.dir/outformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/outformat.cpp -[ 27%] Linking CXX shared module ../../lib/pcmodelformat.so -[ 27%] Linking CXX shared module ../../lib/xyzformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 +Scanning dependencies of target outformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target opendxformat -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 27%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.o +[ 28%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/outformat.dir/outformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/outformat.cpp +[ 28%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dopendxformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/opendxformat.dir/opendxformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/opendxformat.cpp -[ 27%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -c /build/openbabel-2.4.1+dfsg/src/fingerprints/finger3.cpp -[ 27%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/gasteiger.o -c /build/openbabel-2.4.1+dfsg/src/charges/gasteiger.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 27%] Built target pcmodelformat +[ 28%] Built target plugin_descriptors make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= +[ 28%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -c /build/openbabel-2.4.1+dfsg/src/fingerprints/fingerecfp.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target rsmiformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 28%] Built target xtcformat make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 27%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.o -[ 27%] Built target xyzformat -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drsmiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/rsmiformat.dir/rsmiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/rsmiformat.cpp make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= +[ 28%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drsmiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/rsmiformat.dir/rsmiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/rsmiformat.cpp Scanning dependencies of target msmsformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 28%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.o +[ 29%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 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CMakeFiles/xtcformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 28%] Built target xtcformat make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= -[ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o +[ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/addnonpolarh.cpp Scanning dependencies of target msiformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 28%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.o +[ 29%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/msiformat.dir/msiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/msiformat.cpp -[ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.o +[ 29%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/none.o -c /build/openbabel-2.4.1+dfsg/src/charges/none.cpp -[ 28%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/filters.cpp -[ 28%] Linking CXX shared module ../../lib/outformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/outformat.so CMakeFiles/outformat.dir/outformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 29%] Linking CXX shared module ../../lib/xmlformat.so +[ 30%] Linking CXX shared module ../../lib/xmlformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.o CMakeFiles/xmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 30%] Linking CXX shared module ../../lib/outformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/outformat.so CMakeFiles/outformat.dir/outformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 29%] Built target xmlformat -[ 29%] Built target outformat +[ 30%] Built target xmlformat make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= @@ -2315,66 +2321,98 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 29%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/inchidescriptor.cpp -[ 29%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.o +[ 30%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpqcformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mpqcformat.dir/mpqcformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mpqcformat.cpp -[ 29%] Linking CXX shared module ../../lib/msmsformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/canonical.o -c /build/openbabel-2.4.1+dfsg/src/ops/canonical.cpp +[ 30%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlreactformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 30%] Built target msmsformat +[ 30%] Linking CXX shared module ../../lib/chemdrawcdx.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 +[ 30%] Built target outformat make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 30%] Linking CXX shared module ../../lib/pcmodelformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 Scanning dependencies of target mpdformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build +/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::ostream&, unsigned int)': +/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:334:46: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] + snprintf(type_name, sizeof(type_name), " %-3s", tmp); + ^~~~~~~ +In file included from /usr/include/stdio.h:873, + from /usr/include/c++/8/cstdio:42, + from /usr/include/c++/8/fstream:41, + from /build/openbabel-2.4.1+dfsg/include/openbabel/tokenst.h:28, + from /build/openbabel-2.4.1+dfsg/include/openbabel/base.h:29, + from /build/openbabel-2.4.1+dfsg/include/openbabel/atom.h:33, + from /build/openbabel-2.4.1+dfsg/include/openbabel/mol.h:42, + from /build/openbabel-2.4.1+dfsg/include/openbabel/obmolecformat.h:37, + from /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:24: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 + return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:351:54: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] + snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); + ^~~~~~~ +In file included from /usr/include/stdio.h:873, + from /usr/include/c++/8/cstdio:42, + from /usr/include/c++/8/fstream:41, + from /build/openbabel-2.4.1+dfsg/include/openbabel/tokenst.h:28, + from /build/openbabel-2.4.1+dfsg/include/openbabel/base.h:29, + from /build/openbabel-2.4.1+dfsg/include/openbabel/atom.h:33, + from /build/openbabel-2.4.1+dfsg/include/openbabel/mol.h:42, + from /build/openbabel-2.4.1+dfsg/include/openbabel/obmolecformat.h:37, + from /build/openbabel-2.4.1+dfsg/src/formats/pdbqtformat.cpp:24: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10 + return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + __bos (__s), __fmt, __va_arg_pack ()); + ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 30%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/mmff94.o -c /build/openbabel-2.4.1+dfsg/src/charges/mmff94.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 30%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpdformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mpdformat.dir/mpdformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mpdformat.cpp -[ 30%] Linking CXX shared module ../../lib/opendxformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 30%] Linking CXX shared module ../../lib/chemdrawcdx.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 30%] Built target chemdrawcdx make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 30%] Linking CXX shared module ../../lib/opendxformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 +[ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/canonical.o -c /build/openbabel-2.4.1+dfsg/src/ops/canonical.cpp Scanning dependencies of target pointcloudformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 30%] Built target opendxformat -[ 30%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -c /build/openbabel-2.4.1+dfsg/src/fingerprints/fingerecfp.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 31%] Linking CXX shared module ../../lib/msmsformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 31%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pointcloudformat.dir/pointcloudformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pointcloudformat.cpp +[ 31%] Built target pcmodelformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= -[ 30%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pointcloudformat.dir/pointcloudformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pointcloudformat.cpp -[ 30%] Linking CXX shared module ../../lib/msiformat.so Scanning dependencies of target mmcifformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/msiformat.so CMakeFiles/msiformat.dir/msiformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 30%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.o +[ 31%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.o +[ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/changecell.o -c /build/openbabel-2.4.1+dfsg/src/ops/changecell.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/mmff94.o -c /build/openbabel-2.4.1+dfsg/src/charges/mmff94.cpp +[ 31%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmcifformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mmcifformat.dir/mmcifformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mmcifformat.cpp -[ 31%] Linking CXX shared module ../../lib/rsmiformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 31%] Built target msiformat +[ 31%] Built target opendxformat make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= @@ -2384,130 +2422,124 @@ make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 31%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdffformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mdffformat.dir/mdffformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mdffformat.cpp -[ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/changecell.o -c /build/openbabel-2.4.1+dfsg/src/ops/changecell.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 31%] Built target rsmiformat +[ 31%] Built target msmsformat make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= -[ 32%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -[ 32%] Linking CXX shared module ../../lib/mpqcformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -c /build/openbabel-2.4.1+dfsg/src/descriptors/smartsdescriptors.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 +[ 32%] Linking CXX shared module ../lib/plugin_fingerprints.so +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz Scanning dependencies of target xedformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 32%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxedformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xedformat.dir/xedformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xedformat.cpp -[ 33%] Linking CXX shared module ../../lib/mpdformat.so -[ 33%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlreactformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 34%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/fromfile.o -c /build/openbabel-2.4.1+dfsg/src/charges/fromfile.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 32%] Built target plugin_fingerprints make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend +[ 32%] Linking CXX shared module ../../lib/msiformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/msiformat.so CMakeFiles/msiformat.dir/msiformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target lpmdformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 35%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.o +[ 33%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlpmdformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/lpmdformat.dir/lpmdformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/lpmdformat.cpp -[ 35%] Built target mpqcformat +[ 33%] Linking CXX shared module ../../lib/mpqcformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 33%] Built target msiformat make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target groformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 35%] Built target mpdformat +[ 34%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/groformat.dir/groformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/groformat.cpp +[ 35%] Linking CXX shared module ../../lib/rsmiformat.so +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 35%] Built target mpqcformat make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= -[ 36%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/groformat.dir/groformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/groformat.cpp +[ 36%] Linking CXX shared module ../../lib/mpdformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 Scanning dependencies of target gausszmatformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 36%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.o +[ 37%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/fromfile.o -c /build/openbabel-2.4.1+dfsg/src/charges/fromfile.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 37%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gausszmatformat.dir/gausszmatformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gausszmatformat.cpp -[ 36%] Linking CXX shared module ../../lib/pdbqtformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 36%] Linking CXX shared module ../../lib/pointcloudformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 +[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/delpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/delpolarh.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 36%] Linking CXX shared module ../lib/plugin_descriptors.so -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 36%] Built target pdbqtformat +[ 37%] Built target rsmiformat make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Linking CXX shared module ../../lib/cmlreactformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 Scanning dependencies of target gausscubeformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Built target mpdformat make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Linking CXX shared module ../lib/plugin_fingerprints.so -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 37%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gausscubeformat.dir/gausscubeformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gausscubeformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Built target pointcloudformat make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o CMakeFiles/cmlreactformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= -[ 37%] Built target plugin_descriptors -make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= +[ 37%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gausscubeformat.dir/gausscubeformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gausscubeformat.cpp Scanning dependencies of target adfformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dadfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/adfformat.dir/adfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/adfformat.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Linking CXX shared module ../../lib/pointcloudformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 +[ 37%] Built target cmlreactformat +make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= Scanning dependencies of target cdxmlformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dadfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/adfformat.dir/adfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/adfformat.cpp -[ 37%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 37%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldghemical.cpp cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/cdxmlformat.cpp -[ 37%] Built target plugin_fingerprints +[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/delnonpolarh.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Built target pointcloudformat make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= -[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/delpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/delpolarh.cpp Scanning dependencies of target daltonformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddaltonformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/daltonformat.dir/daltonformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/daltonformat.cpp -[ 37%] Linking CXX shared module ../../lib/cmlreactformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o CMakeFiles/cmlreactformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 37%] Linking CXX shared module ../../lib/xedformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xedformat.so CMakeFiles/xedformat.dir/xedformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 37%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/eqeq.o -c /build/openbabel-2.4.1+dfsg/src/charges/eqeq.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 37%] Built target xedformat make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend @@ -2517,10 +2549,26 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/asciiformat.dir/asciiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/asciiformat.cpp -[ 37%] Built target cmlreactformat +[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/gen2D.o -c /build/openbabel-2.4.1+dfsg/src/ops/gen2D.cpp +[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/fillUC.o -c /build/openbabel-2.4.1+dfsg/src/ops/fillUC.cpp +[ 37%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/eqeq.o -c /build/openbabel-2.4.1+dfsg/src/charges/eqeq.cpp +[ 37%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldghemical.cpp +[ 37%] Linking CXX shared module ../../lib/gausszmatformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 37%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cdxmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp +[ 37%] Linking CXX shared module ../../lib/pdbqtformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 37%] Built target gausszmatformat make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= @@ -2530,13 +2578,8 @@ make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drxnformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/rxnformat.dir/rxnformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/rxnformat.cpp -[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o -c /build/openbabel-2.4.1+dfsg/src/ops/delnonpolarh.cpp -[ 37%] Linking CXX shared module ../../lib/gausszmatformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Built target gausszmatformat +[ 37%] Built target pdbqtformat make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= @@ -2544,43 +2587,53 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.o [ 37%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrystal09format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/crystal09format.dir/crystal09format.o -c /build/openbabel-2.4.1+dfsg/src/formats/crystal09format.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cdxmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp -[ 37%] Linking CXX shared module ../../lib/daltonformat.so +[ 38%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/asciipainter.cpp +[ 38%] Linking CXX shared module ../../lib/daltonformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 39%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/forcefield.o -c /build/openbabel-2.4.1+dfsg/src/ops/forcefield.cpp +[ 39%] Linking CXX shared module ../../lib/mdffformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Linking CXX shared module ../../lib/groformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/groformat.so CMakeFiles/groformat.dir/groformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 37%] Built target daltonformat +[ 39%] Built target daltonformat make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= -[ 37%] Linking CXX shared module ../../lib/mmcifformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 Scanning dependencies of target chemkinformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.o +[ 39%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemkinformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chemkinformat.dir/chemkinformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/chemkinformat.cpp -[ 37%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cmlformat.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Built target groformat +[ 39%] Built target mdffformat make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target jaguarformat -[ 37%] Built target mmcifformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 39%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Djaguarformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/jaguarformat.dir/jaguarformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/jaguarformat.cpp +[ 39%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/gen3d.o -c /build/openbabel-2.4.1+dfsg/src/ops/gen3d.cpp +[ 39%] Linking CXX shared module ../../lib/adfformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/adfformat.so CMakeFiles/adfformat.dir/adfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 39%] Linking CXX shared module ../../lib/mmcifformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 +[ 39%] Linking CXX shared module ../../lib/groformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/groformat.so CMakeFiles/groformat.dir/groformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 39%] Built target adfformat make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= @@ -2588,128 +2641,113 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Djaguarformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/jaguarformat.dir/jaguarformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/jaguarformat.cpp -[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/gen2D.o -c /build/openbabel-2.4.1+dfsg/src/ops/gen2D.cpp -[ 37%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.o +[ 39%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Daoforceformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/aoforceformat.dir/aoforceformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/aoforceformat.cpp -[ 38%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/asciipainter.cpp -[ 38%] Linking CXX shared module ../../lib/lpmdformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 38%] Linking CXX shared module ../../lib/mdffformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 39%] Linking CXX shared module ../../lib/cdxmlformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 -[ 39%] Built target lpmdformat +[ 39%] Built target groformat make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o CMakeFiles/cdxmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 40%] Linking CXX shared module ../../lib/cdxmlformat.so Scanning dependencies of target pubchem make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build -[ 39%] Linking CXX shared module ../../lib/rxnformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 39%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.o +[ 40%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pubchem.dir/xml/pubchem.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/pubchem.cpp -[ 39%] Built target mdffformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o CMakeFiles/cdxmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 40%] Linking CXX shared module ../../lib/lpmdformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 +[ 40%] Built target mmcifformat make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= -[ 39%] Linking CXX shared module ../../lib/adfformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 +[ 40%] Linking CXX shared module ../../lib/cmlformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 Scanning dependencies of target turbomoleformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/adfformat.so CMakeFiles/adfformat.dir/adfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.o CMakeFiles/cmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 39%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.o -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 40%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/turbomoleformat.dir/turbomoleformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/turbomoleformat.cpp +[ 40%] Linking CXX shared module ../../lib/asciiformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 39%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/fillUC.o -c /build/openbabel-2.4.1+dfsg/src/ops/fillUC.cpp -[ 39%] Built target rxnformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 40%] Built target lpmdformat make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= -[ 39%] Built target cdxmlformat -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= Scanning dependencies of target abinitformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 39%] Linking CXX shared module ../../lib/asciiformat.so -Scanning dependencies of target acesformat -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build +[ 41%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dabinitformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/abinitformat.dir/abinitformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/abinitformat.cpp +[ 41%] Built target cdxmlformat +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 39%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.o -[ 40%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacesformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/acesformat.dir/acesformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/acesformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dabinitformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/abinitformat.dir/abinitformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/abinitformat.cpp -[ 40%] Built target adfformat +[ 41%] Built target cmlformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= -Scanning dependencies of target alchemyformat +Scanning dependencies of target acesformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build -[ 40%] Linking CXX shared module ../../lib/cmlformat.so +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 -[ 40%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/alchemyformat.dir/alchemyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/alchemyformat.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.o CMakeFiles/cmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 40%] Built target asciiformat +[ 41%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacesformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/acesformat.dir/acesformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/acesformat.cpp +Scanning dependencies of target alchemyformat +[ 41%] Built target asciiformat make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target smilesformat +[ 41%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build -[ 41%] Linking CXX shared module ../../lib/crystal09format.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/alchemyformat.dir/alchemyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/alchemyformat.cpp make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 41%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmilesformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/smilesformat.dir/smilesformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/smilesformat.cpp -[ 41%] Built target cmlformat +[ 41%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/largest.o -c /build/openbabel-2.4.1+dfsg/src/ops/largest.cpp +[ 41%] Linking CXX shared module ../../lib/rxnformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 41%] Linking CXX shared module ../../lib/gausscubeformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 41%] Built target rxnformat make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend -[ 41%] Linking CXX shared module ../../lib/jaguarformat.so make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target CSRformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 41%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/CSRformat.dir/CSRformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/CSRformat.cpp -[ 41%] Linking CXX shared module ../../lib/gausscubeformat.so +[ 41%] Linking CXX shared module ../../lib/jaguarformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 -[ 41%] Built target crystal09format +[ 41%] Built target gausscubeformat make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target confabreport make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build @@ -2721,32 +2759,38 @@ make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 41%] Built target gausscubeformat -make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend Scanning dependencies of target pdbformat -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target painterformat [ 41%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.o -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pdbformat.dir/pdbformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pdbformat.cpp -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 41%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/painterformat.dir/painterformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/painterformat.cpp +[ 41%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/loader.o -c /build/openbabel-2.4.1+dfsg/src/ops/loader.cpp [ 41%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pubchem.dir/xml/xml.o -c /build/openbabel-2.4.1+dfsg/src/formats/xml/xml.cpp [ 41%] Linking CXX shared module ../../lib/turbomoleformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 42%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/forcefield.o -c /build/openbabel-2.4.1+dfsg/src/ops/forcefield.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 42%] Built target turbomoleformat +[ 41%] Built target turbomoleformat +make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= +Scanning dependencies of target painterformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 41%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/painterformat.dir/painterformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/painterformat.cpp +[ 41%] Linking CXX shared module ../../lib/alchemyformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 42%] Linking CXX shared module ../../lib/crystal09format.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 42%] Built target alchemyformat make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= @@ -2756,20 +2800,11 @@ make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 42%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmileyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/smileyformat.dir/smileyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/smileyformat.cpp -[ 42%] Linking CXX shared module ../../lib/CSRformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 42%] Linking CXX shared module ../../lib/alchemyformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 42%] Linking CXX shared module ../../lib/aoforceformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 42%] Linking CXX shared module ../../lib/abinitformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 42%] Built target CSRformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 42%] Built target crystal09format make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= @@ -2779,55 +2814,59 @@ make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 43%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpovrayformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/povrayformat.dir/povrayformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/povrayformat.cpp +[ 43%] Linking CXX shared module ../../lib/abinitformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 43%] Linking CXX shared module ../../lib/acesformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 43%] Built target alchemyformat +[ 43%] Linking CXX shared module ../../lib/CSRformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 +[ 43%] Built target aoforceformat make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/acesformat.so CMakeFiles/acesformat.dir/acesformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +Scanning dependencies of target shelxformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 43%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dshelxformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/shelxformat.dir/shelxformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/shelxformat.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 43%] Built target abinitformat make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target shelxformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target xsfformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build +[ 43%] Linking CXX shared module ../../lib/acesformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 43%] Built target aoforceformat -[ 43%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dshelxformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/shelxformat.dir/shelxformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/shelxformat.cpp +[ 43%] Built target CSRformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/acesformat.so CMakeFiles/acesformat.dir/acesformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 43%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxsfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/xsfformat.dir/xsfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/xsfformat.cpp Scanning dependencies of target inchiformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 43%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/inchiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/inchiformat.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 43%] Built target acesformat make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= -[ 43%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/inchiformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/inchiformat.cpp Scanning dependencies of target mdlformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 43%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mdlformat.dir/mdlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mdlformat.cpp -[ 43%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/painterformat.dir/__/depict/commandpainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/commandpainter.cpp /build/openbabel-2.4.1+dfsg/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-2.4.1+dfsg/src/formats/pdbformat.cpp:623:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(type_name, sizeof(type_name), " %-3s", tmp); @@ -2881,33 +2920,70 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 43%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldmmff94.cpp -[ 43%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/gen3d.o -c /build/openbabel-2.4.1+dfsg/src/ops/gen3d.cpp -[ 44%] Linking CXX shared module ../../lib/pubchem.so +[ 43%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opsplit.o -c /build/openbabel-2.4.1+dfsg/src/ops/opsplit.cpp +[ 44%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/optransform.o -c /build/openbabel-2.4.1+dfsg/src/ops/optransform.cpp +[ 44%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/painterformat.dir/__/depict/commandpainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/commandpainter.cpp +[ 45%] Linking CXX shared module ../../lib/pubchem.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.o CMakeFiles/pubchem.dir/xml/xml.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 44%] Linking CXX shared module ../../lib/confabreport.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/confabreport.so CMakeFiles/confabreport.dir/confabreport.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Linking CXX shared module ../../lib/painterformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/painterformat.so CMakeFiles/painterformat.dir/painterformat.o CMakeFiles/painterformat.dir/__/depict/commandpainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target confabreport +[ 45%] Built target pubchem make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats 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-pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/confabreport.so CMakeFiles/confabreport.dir/confabreport.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 46%] Linking CXX shared module ../../lib/painterformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/painterformat.so CMakeFiles/painterformat.dir/painterformat.o CMakeFiles/painterformat.dir/__/depict/commandpainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Built target confabreport make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= +[ 46%] Built target painterformat +make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= +Scanning dependencies of target lmpdatformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target fastsearchformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/lmpdatformat.dir/lmpdatformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/lmpdatformat.cpp +[ 46%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fastsearchformat.dir/fastsearchformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fastsearchformat.cpp +[ 46%] Linking CXX shared module ../../lib/shelxformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 46%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefieldmmff94.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Built target shelxformat +make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= +Scanning dependencies of target thermoformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dthermoformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/thermoformat.dir/thermoformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/thermoformat.cpp /build/openbabel-2.4.1+dfsg/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector<OpenBabel::OBAtom*>&, std::vector<unsigned int>&, char*, bool)': /build/openbabel-2.4.1+dfsg/src/formats/smilesformat.cpp:2989:19: warning: '%d' directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=] sprintf(iso,"%d",atom->GetIsotope()); @@ -2944,44 +3020,13 @@ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dposformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/posformat.dir/posformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/posformat.cpp -Scanning dependencies of target lmpdatformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/lmpdatformat.dir/lmpdatformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/lmpdatformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target painterformat -make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= -Scanning dependencies of target fastsearchformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fastsearchformat.dir/fastsearchformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fastsearchformat.cpp -[ 45%] Linking CXX shared module ../../lib/shelxformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Linking CXX shared module ../../lib/xsfformat.so +[ 46%] Linking CXX shared module ../../lib/xsfformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target shelxformat -make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target thermoformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target xsfformat -[ 45%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dthermoformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/thermoformat.dir/thermoformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/thermoformat.cpp +[ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/partialcharges.o -c /build/openbabel-2.4.1+dfsg/src/ops/partialcharges.cpp +[ 46%] Built target xsfformat make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= @@ -2989,38 +3034,72 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.o +[ 46%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgulpformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gulpformat.dir/gulpformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gulpformat.cpp -[ 45%] Linking CXX shared module ../../lib/chemkinformat.so +[ 46%] Linking CXX shared module ../../lib/chemkinformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/largest.o -c /build/openbabel-2.4.1+dfsg/src/ops/largest.cpp +[ 46%] Linking CXX shared module ../../lib/povrayformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 46%] Linking CXX shared module ../../lib/pdbformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 46%] Linking CXX shared module ../../lib/posformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/posformat.so CMakeFiles/posformat.dir/posformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target chemkinformat +[ 46%] Built target povrayformat make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= +[ 46%] Built target chemkinformat +make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= Scanning dependencies of target mmodformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Linking CXX shared module ../../lib/povrayformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 -[ 45%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mmodformat.dir/mmodformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mmodformat.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target povrayformat -make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= Scanning dependencies of target mol2format make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build +[ 46%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.o make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mmodformat.dir/mmodformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mmodformat.cpp +[ 46%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/getinchi.o -c /build/openbabel-2.4.1+dfsg/src/formats/getinchi.cpp +[ 46%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmol2format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mol2format.dir/mol2format.o -c /build/openbabel-2.4.1+dfsg/src/formats/mol2format.cpp +[ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /build/openbabel-2.4.1+dfsg/src/ops/readconformers.cpp +[ 46%] Built target posformat +make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= +[ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/sort.o -c /build/openbabel-2.4.1+dfsg/src/ops/sort.cpp +Scanning dependencies of target MNAformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/MNAformat.dir/MNAformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/MNAformat.cpp +[ 46%] Built target pdbformat +make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= +Scanning dependencies of target png2format +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 46%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/png2format.dir/png2format.o -c /build/openbabel-2.4.1+dfsg/src/formats/png2format.cpp +[ 46%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/__/ops/unique.o -c /build/openbabel-2.4.1+dfsg/src/ops/unique.cpp /build/openbabel-2.4.1+dfsg/src/formats/lmpdatformat.cpp: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-2.4.1+dfsg/src/formats/lmpdatformat.cpp:528:10: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] "%-4d %4d %4d %4d %4d %4d # %11s\n", @@ -3142,6 +3221,8 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 46%] Linking CXX shared module ../../lib/thermoformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 /build/openbabel-2.4.1+dfsg/src/formats/mdlformat.cpp: In member function 'std::__cxx11::string OpenBabel::MDLFormat::GetTimeDate()': /build/openbabel-2.4.1+dfsg/src/formats/mdlformat.cpp:1652:22: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, @@ -3161,52 +3242,46 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Linking CXX shared module ../../lib/posformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 -[ 45%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/getinchi.o -c /build/openbabel-2.4.1+dfsg/src/formats/getinchi.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/posformat.so CMakeFiles/posformat.dir/posformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Linking CXX shared module ../../lib/pdbformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Linking CXX shared module ../../lib/thermoformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 45%] Built target posformat -make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target MNAformat +[ 46%] Built target thermoformat +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= +Scanning dependencies of target balstformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target pdbformat -make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend +[ 46%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/balstformat.dir/balstformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/balstformat.cpp +[ 46%] Linking CXX shared module ../../lib/gulpformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 47%] Linking CXX shared module ../../lib/smileyformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 47%] Built target gulpformat +make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= -[ 45%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/MNAformat.dir/MNAformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/MNAformat.cpp -Scanning dependencies of target png2format +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= +Scanning dependencies of target dmolformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build +make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/png2format.dir/png2format.o -c /build/openbabel-2.4.1+dfsg/src/formats/png2format.cpp +[ 47%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddmolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/dmolformat.dir/dmolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/dmolformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target thermoformat -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +[ 47%] Built target smileyformat +make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= -[ 45%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/__/ops/unique.o -c /build/openbabel-2.4.1+dfsg/src/ops/unique.cpp -Scanning dependencies of target balstformat +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= +Scanning dependencies of target castepformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build +make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/balstformat.dir/balstformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/balstformat.cpp +[ 47%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcastepformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/castepformat.dir/castepformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/castepformat.cpp /build/openbabel-2.4.1+dfsg/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-2.4.1+dfsg/src/formats/mol2format.cpp:677:35: warning: '%-6s' directive output may be truncated writing between 6 and 32767 bytes into a region of size between 32756 and 32760 [-Wformat-truncation=] snprintf(buffer,BUFF_SIZE,"%7d %-6s %9.4f %9.4f %9.4f %-5s %3s %-8s %9.4f", @@ -3247,515 +3322,486 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Linking CXX shared module ../../lib/mmodformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 -[ 45%] Linking CXX shared module ../../lib/gulpformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Built target mmodformat -make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= -Scanning dependencies of target dmolformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 45%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddmolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/dmolformat.dir/dmolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/dmolformat.cpp -[ 46%] Linking CXX shared module ../../lib/smileyformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 46%] Built target gulpformat -make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= -Scanning dependencies of target castepformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 46%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcastepformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/castepformat.dir/castepformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/castepformat.cpp +[ 47%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /build/openbabel-2.4.1+dfsg/src/ops/opisomorph.cpp +[ 47%] Linking CXX shared module ../../lib/fastsearchformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 47%] Linking CXX shared module ../../lib/lmpdatformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 47%] Linking CXX shared module ../../lib/MNAformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 46%] Built target smileyformat +[ 47%] Built target fastsearchformat make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= -[ 46%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/loader.o -c /build/openbabel-2.4.1+dfsg/src/ops/loader.cpp Scanning dependencies of target gamessukformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 47%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.o +[ 48%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 47%] Linking CXX shared module ../../lib/fastsearchformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 47%] Linking CXX shared module ../../lib/balstformat.so +[ 48%] Linking CXX shared module ../../lib/balstformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/balstformat.so CMakeFiles/balstformat.dir/balstformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 47%] Built target lmpdatformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 49%] Linking CXX shared module ../../lib/inchiformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 +[ 49%] Built target MNAformat make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 48%] Linking CXX shared module ../../lib/inchiformat.so cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.o CMakeFiles/inchiformat.dir/getinchi.o CMakeFiles/inchiformat.dir/__/ops/unique.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 49%] Built target lmpdatformat +make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= Scanning dependencies of target fpsformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 49%] Linking CXX shared module ../../lib/mol2format.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 -[ 49%] Linking CXX shared module ../../lib/MNAformat.so -[ 49%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfpsformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fpsformat.dir/fpsformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fpsformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mol2format.so CMakeFiles/mol2format.dir/mol2format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 49%] Built target fastsearchformat -make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= Scanning dependencies of target nulformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 49%] Linking CXX shared module ../../lib/mmodformat.so make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 49%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfpsformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fpsformat.dir/fpsformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fpsformat.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 49%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnulformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/nulformat.dir/nulformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/nulformat.cpp +[ 49%] Linking CXX shared module ../../lib/dmolformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 49%] Built target mol2format +[ 49%] Built target balstformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= -[ 49%] Built target MNAformat -make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 49%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.o -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnulformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/nulformat.dir/nulformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/nulformat.cpp Scanning dependencies of target gamessformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 49%] Built target balstformat +[ 49%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gamessformat.dir/gamessformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gamessformat.cpp +[ 49%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/png2format.dir/__/depict/cairopainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/cairopainter.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 49%] Built target inchiformat +make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target unichemformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 49%] Built target mmodformat make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= -[ 49%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gamessformat.dir/gamessformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gamessformat.cpp [ 50%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dunichemformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/unichemformat.dir/unichemformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/unichemformat.cpp Scanning dependencies of target molreport make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dunichemformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/unichemformat.dir/unichemformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/unichemformat.cpp make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolreport_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/molreport.dir/molreport.o -c /build/openbabel-2.4.1+dfsg/src/formats/molreport.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 51%] Built target inchiformat +[ 50%] Built target dmolformat make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= +[ 51%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolreport_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/molreport.dir/molreport.o -c /build/openbabel-2.4.1+dfsg/src/formats/molreport.cpp Scanning dependencies of target stlformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 51%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dstlformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/stlformat.dir/stlformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/stlformat.cpp -[ 51%] Linking CXX shared module ../../lib/dmolformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 51%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/png2format.dir/__/depict/cairopainter.o -c /build/openbabel-2.4.1+dfsg/src/depict/cairopainter.cpp -[ 51%] Linking CXX shared module ../../lib/nulformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/nulformat.so CMakeFiles/nulformat.dir/nulformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 52%] Linking CXX shared module ../../lib/mol2format.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mol2format.so CMakeFiles/mol2format.dir/mol2format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 51%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opsplit.o -c /build/openbabel-2.4.1+dfsg/src/ops/opsplit.cpp -[ 51%] Built target dmolformat +[ 52%] Linking CXX shared module ../../lib/nulformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 +[ 53%] Linking CXX shared module ../../lib/castepformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 +[ 53%] Built target mol2format make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/castepformat.so CMakeFiles/castepformat.dir/castepformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/nulformat.so CMakeFiles/nulformat.dir/nulformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target titleformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 51%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.o -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 53%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtitleformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/titleformat.dir/titleformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/titleformat.cpp -[ 51%] Built target nulformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 53%] Built target nulformat make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target mopacformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 52%] Linking CXX shared module ../../lib/castepformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 -[ 52%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mopacformat.dir/mopacformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mopacformat.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/castepformat.so CMakeFiles/castepformat.dir/castepformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 53%] Linking CXX shared module ../../lib/fpsformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 53%] Linking CXX shared module ../../lib/png2format.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 -[ 53%] Linking CXX shared module ../../lib/molreport.so -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/png2format.so CMakeFiles/png2format.dir/png2format.o CMakeFiles/png2format.dir/__/depict/cairopainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/molreport.so CMakeFiles/molreport.dir/molreport.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Built target fpsformat -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 53%] Built target castepformat +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/png2format.so CMakeFiles/png2format.dir/png2format.o CMakeFiles/png2format.dir/__/depict/cairopainter.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 53%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/mopacformat.dir/mopacformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/mopacformat.cpp Scanning dependencies of target nwchemformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 53%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnwchemformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/nwchemformat.dir/nwchemformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/nwchemformat.cpp +[ 54%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /build/openbabel-2.4.1+dfsg/src/ops/ophighlight.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 54%] Built target png2format +make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= Scanning dependencies of target APIInterface make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build make[4]: Entering directory 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CMakeFiles/nwchemformat.dir/nwchemformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/nwchemformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.o +[ 54%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong 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-lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 55%] Linking CXX shared module ../../lib/APIInterface.so +[ 55%] Built target fpsformat +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target qchemformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.o +[ 55%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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--verbose=1 -[ 53%] Built target molreport +[ 55%] Linking CXX shared module ../../lib/titleformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 +[ 55%] Built target APIInterface make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/titleformat.so CMakeFiles/titleformat.dir/titleformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target svgformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.o +[ 55%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o +[ 55%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread 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CMakeFiles/svgformat.dir/svgformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/svgformat.cpp +[ 55%] Linking CXX shared module ../../lib/stlformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 +[ 55%] Linking CXX shared module ../../lib/molreport.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 +[ 55%] Linking CXX shared module ../../lib/unichemformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined 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shared module ../../lib/stlformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 +[ 55%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/conformer.o -c /build/openbabel-2.4.1+dfsg/src/ops/conformer.cpp Scanning dependencies of target fastaformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/stlformat.so CMakeFiles/stlformat.dir/stlformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.o +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 55%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /build/openbabel-2.4.1+dfsg/src/ops/opalign.cpp +[ 55%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastaformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fastaformat.dir/fastaformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fastaformat.cpp -[ 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'/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 53%] Built target stlformat make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 55%] Built target stlformat +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend Scanning dependencies of target fingerprintformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build -[ 53%] Built target APIInterface -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg 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-Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fingerprintformat.dir/fingerprintformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fingerprintformat.cpp +make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target siestaformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 54%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.o +[ 55%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.o +[ 56%] Building CXX object 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/build/openbabel-2.4.1+dfsg/src/formats/siestaformat.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fingerprintformat.dir/fingerprintformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fingerprintformat.cpp +[ 56%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opconfab.o -c /build/openbabel-2.4.1+dfsg/src/ops/opconfab.cpp +[ 56%] Linking CXX shared module ../../lib/smilesformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 57%] Linking CXX shared module ../../lib/mdlformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat 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-DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dreportformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/reportformat.dir/reportformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/reportformat.cpp -[ 56%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/optransform.o -c /build/openbabel-2.4.1+dfsg/src/ops/optransform.cpp -[ 57%] Linking CXX shared module ../../lib/mdlformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 57%] Linking CXX shared module ../../lib/titleformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/titleformat.so CMakeFiles/titleformat.dir/titleformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Built target mdlformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 58%] Built target mdlformat make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= +[ 58%] Built target fastaformat +make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= Scanning dependencies of target pngformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS 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'/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= Scanning dependencies of target vaspformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dvaspformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/vaspformat.dir/vaspformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/vaspformat.cpp -[ 57%] Linking CXX shared module ../../lib/fastaformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 57%] Linking CXX shared module ../../lib/svgformat.so -[ 57%] Linking CXX shared module ../../lib/fingerprintformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/svgformat.so CMakeFiles/svgformat.dir/svgformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 57%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o +[ 58%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpngformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pngformat.dir/pngformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pngformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefielduff.cpp -[ 57%] Built target fastaformat +[ 58%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dvaspformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/vaspformat.dir/vaspformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/vaspformat.cpp +[ 58%] Built target qchemformat make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend +[ 58%] Linking CXX shared module ../../lib/svgformat.so make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/svgformat.so CMakeFiles/svgformat.dir/svgformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target pwscfformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.o +[ 58%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpwscfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pwscfformat.dir/pwscfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pwscfformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Built target svgformat +[ 58%] Built target svgformat make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target acrformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Built target fingerprintformat +[ 58%] Linking CXX shared module ../../lib/siestaformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 +[ 58%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/acrformat.dir/acrformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/acrformat.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 58%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o +[ 58%] Linking CXX shared module ../../lib/gamessukformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -c /build/openbabel-2.4.1+dfsg/src/forcefields/forcefielduff.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= -[ 57%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/acrformat.dir/acrformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/acrformat.cpp +[ 58%] Linking CXX shared module ../../lib/fingerprintformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 Scanning dependencies of target zindoformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.o +[ 58%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Built target qchemformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 58%] Built target gamessukformat make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg 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-Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/moldenformat.dir/moldenformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/moldenformat.cpp -[ 57%] Linking CXX shared module ../../lib/reportformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/reportformat.so CMakeFiles/reportformat.dir/reportformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Built target gamessukformat +[ 58%] Built target siestaformat +[ 58%] Linking CXX shared module ../../lib/mopacformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= +Scanning dependencies of target moldenformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build Scanning dependencies of target orcaformat +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 57%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dorcaformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/orcaformat.dir/orcaformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/orcaformat.cpp -[ 58%] 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-I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/moldenformat.dir/moldenformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/moldenformat.cpp +[ 59%] Linking CXX shared module ../lib/plugin_ops.so +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 +[ 59%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.o +[ 59%] Built target fingerprintformat +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dorcaformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/orcaformat.dir/orcaformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/orcaformat.cpp make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.o CMakeFiles/plugin_ops.dir/ops/addinindex.o CMakeFiles/plugin_ops.dir/ops/addpolarh.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.o CMakeFiles/plugin_ops.dir/ops/canonical.o CMakeFiles/plugin_ops.dir/ops/changecell.o CMakeFiles/plugin_ops.dir/ops/delpolarh.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.o CMakeFiles/plugin_ops.dir/ops/gen2D.o CMakeFiles/plugin_ops.dir/ops/fillUC.o CMakeFiles/plugin_ops.dir/ops/forcefield.o CMakeFiles/plugin_ops.dir/ops/gen3d.o CMakeFiles/plugin_ops.dir/ops/largest.o CMakeFiles/plugin_ops.dir/ops/loader.o CMakeFiles/plugin_ops.dir/ops/opsplit.o CMakeFiles/plugin_ops.dir/ops/optransform.o CMakeFiles/plugin_ops.dir/ops/partialcharges.o CMakeFiles/plugin_ops.dir/ops/readconformers.o CMakeFiles/plugin_ops.dir/ops/sort.o CMakeFiles/plugin_ops.dir/ops/opisomorph.o CMakeFiles/plugin_ops.dir/ops/ophighlight.o CMakeFiles/plugin_ops.dir/ops/xout.o CMakeFiles/plugin_ops.dir/ops/conformer.o CMakeFiles/plugin_ops.dir/ops/opalign.o CMakeFiles/plugin_ops.dir/ops/opconfab.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= Scanning dependencies of target PQSformat -[ 58%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.o +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/qeq.o -c /build/openbabel-2.4.1+dfsg/src/charges/qeq.cpp make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 58%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.o +[ 59%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DPQSformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/PQSformat.dir/PQSformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/PQSformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 58%] Built target siestaformat -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= Scanning dependencies of target MCDLformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 58%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.o +[ 59%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS 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Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= -[ 58%] Linking CXX shared module ../../lib/mopacformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 59%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.o +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/qeq.o -c /build/openbabel-2.4.1+dfsg/src/charges/qeq.cpp Scanning dependencies of target copyformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat 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/usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/copyformat.dir/copyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/copyformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 60%] Linking CXX shared module ../../lib/acrformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 -[ 60%] Built target mopacformat +[ 59%] Built target plugin_ops make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend -[ 60%] Linking CXX shared module ../../lib/pwscfformat.so +make[4]: Entering directory 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-lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 60%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcopyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/copyformat.dir/copyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/copyformat.cpp Scanning dependencies of target freefracformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 60%] Building CXX object 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/build/openbabel-2.4.1+dfsg/src/formats/freefracformat.cpp +[ 60%] Linking CXX shared module ../../lib/copyformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 +[ 61%] Linking CXX shared module ../../lib/pngformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/copyformat.so CMakeFiles/copyformat.dir/copyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pngformat.so CMakeFiles/pngformat.dir/pngformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 60%] Built target pwscfformat +[ 61%] Built target pngformat make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 62%] Linking CXX shared module ../../lib/nwchemformat.so +[ 63%] Linking CXX shared module ../../lib/zindoformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 Scanning dependencies of target amberformat -[ 60%] Linking CXX shared module ../../lib/copyformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 60%] Built target acrformat make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 64%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Damberformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/amberformat.dir/amberformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/amberformat.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 64%] Linking CXX shared module ../../lib/reportformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 +[ 64%] Built target copyformat make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/copyformat.so CMakeFiles/copyformat.dir/copyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= -[ 61%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Damberformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/amberformat.dir/amberformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/amberformat.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/reportformat.so CMakeFiles/reportformat.dir/reportformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 64%] Linking CXX shared module ../../lib/pwscfformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 Scanning dependencies of target cccformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 61%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.o +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 64%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcccformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cccformat.dir/cccformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cccformat.cpp -[ 62%] Linking CXX shared module ../../lib/nwchemformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 62%] Built target copyformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 64%] Built target reportformat make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= +[ 64%] Built target zindoformat +make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= Scanning dependencies of target bgfformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 63%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbgfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/bgfformat.dir/bgfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/bgfformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 64%] Linking CXX shared module ../../lib/zindoformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 -[ 64%] Built target nwchemformat -make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target gaussformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 64%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gaussformat.dir/gaussformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gaussformat.cpp -[ 64%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/partialcharges.o -c /build/openbabel-2.4.1+dfsg/src/ops/partialcharges.cpp -[ 64%] Linking CXX shared module ../../lib/gamessformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 64%] Built target zindoformat +[ 65%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbgfformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/bgfformat.dir/bgfformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/bgfformat.cpp +[ 65%] Built target nwchemformat make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= +[ 65%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gaussformat.dir/gaussformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/gaussformat.cpp Scanning dependencies of target boxformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 64%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dboxformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/boxformat.dir/boxformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/boxformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 64%] Built target gamessformat +[ 65%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dboxformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/boxformat.dir/boxformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/boxformat.cpp +[ 65%] Built target pwscfformat make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= @@ -3763,26 +3809,14 @@ make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.o +[ 66%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacheformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cacheformat.dir/cacheformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cacheformat.cpp -[ 65%] Linking CXX shared module ../../lib/freefracformat.so +[ 66%] Linking CXX shared module ../../lib/freefracformat.so cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 +[ 67%] Linking CXX shared module ../../lib/acrformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 65%] Linking CXX shared module ../../lib/PQSformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 65%] Built target freefracformat -make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= -Scanning dependencies of target cacaoformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cacaoformat.dir/cacaoformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cacaoformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/acrformat.so CMakeFiles/acrformat.dir/acrformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz /build/openbabel-2.4.1+dfsg/src/formats/MCDLformat.cpp: In member function 'std::__cxx11::string OpenBabel::MCDLFormat::constring(int (*)[4], char*)': /build/openbabel-2.4.1+dfsg/src/formats/MCDLformat.cpp:209:30: warning: '%s' directive writing up to 99 bytes into a region of size 82 [-Wformat-overflow=] sprintf(line,"%s%d",semis,icons[j]); @@ -3801,132 +3835,143 @@ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 65%] Linking CXX shared module ../../lib/amberformat.so -[ 65%] Built target PQSformat -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 67%] Built target acrformat +make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend +[ 67%] Built target freefracformat +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/amberformat.so CMakeFiles/amberformat.dir/amberformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +Scanning dependencies of target cacaoformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target fchkformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.o +[ 67%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.o +[ 67%] Linking CXX shared module ../../lib/PQSformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cacaoformat.dir/cacaoformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cacaoformat.cpp +[ 67%] Linking CXX shared module ../../lib/amberformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 67%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfchkformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fchkformat.dir/fchkformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fchkformat.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/amberformat.so CMakeFiles/amberformat.dir/amberformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Built target amberformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 67%] Built target PQSformat make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend +[ 67%] Linking CXX shared module ../../lib/gamessformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= +[ 67%] Built target amberformat +make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target carformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcarformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/carformat.dir/carformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/carformat.cpp -[ 65%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /build/openbabel-2.4.1+dfsg/src/ops/readconformers.cpp -[ 65%] Linking CXX shared module ../../lib/cccformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Built target cccformat -make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= Scanning dependencies of target pqrformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.o -[ 65%] Linking CXX shared module ../../lib/boxformat.so +[ 67%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcarformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/carformat.dir/carformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/carformat.cpp +[ 67%] Linking CXX shared module ../../lib/cccformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 +[ 67%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpqrformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/pqrformat.dir/pqrformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/pqrformat.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 -[ 65%] Linking CXX shared module ../../lib/moldenformat.so -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/boxformat.so CMakeFiles/boxformat.dir/boxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 65%] Linking CXX shared module ../../lib/cacheformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 65%] Linking CXX shared module ../../lib/vaspformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 -[ 65%] Linking CXX shared module ../../lib/bgfformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Built target cacheformat -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 67%] Built target gamessformat make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= -[ 65%] Built target boxformat +[ 67%] Built target cccformat make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend +Scanning dependencies of target chem3dformat make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= -Scanning dependencies of target chem3dformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target chemdrawct make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 65%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.o +[ 67%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchem3dformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chem3dformat.dir/chem3dformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/chem3dformat.cpp -[ 65%] Built target moldenformat -make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend -[ 66%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.o +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 68%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawct_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chemdrawct.dir/chemdrawct.o -c /build/openbabel-2.4.1+dfsg/src/formats/chemdrawct.cpp +[ 68%] Linking CXX shared module ../../lib/bgfformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 68%] Linking CXX shared module ../../lib/moldenformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 68%] Linking CXX shared module ../../lib/boxformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/boxformat.so CMakeFiles/boxformat.dir/boxformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 68%] Built target bgfformat +make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= Scanning dependencies of target tinkerformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 66%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.o +[ 68%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtinkerformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/tinkerformat.dir/tinkerformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/tinkerformat.cpp -[ 66%] Built target vaspformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 68%] Built target moldenformat make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= Scanning dependencies of target hinformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 67%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dhinformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/hinformat.dir/hinformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/hinformat.cpp -[ 67%] Built target bgfformat +[ 68%] Linking CXX shared module ../../lib/cacheformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 +[ 68%] Built target boxformat make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= +[ 69%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dhinformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/hinformat.dir/hinformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/hinformat.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target molproformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 67%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.o +[ 69%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolproformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/molproformat.dir/molproformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/molproformat.cpp -[ 67%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/sort.o -c /build/openbabel-2.4.1+dfsg/src/ops/sort.cpp -[ 67%] Linking CXX shared module ../../lib/carformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/carformat.so CMakeFiles/carformat.dir/carformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 67%] Linking CXX shared module ../../lib/cacaoformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 67%] Built target cacaoformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 69%] Built target cacheformat make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= -[ 67%] Built target carformat -make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend +[ 69%] Linking CXX shared module ../../lib/chem3dformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 +Scanning dependencies of target chemtoolformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 69%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chemtoolformat.dir/chemtoolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/chemtoolformat.cpp /build/openbabel-2.4.1+dfsg/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': /build/openbabel-2.4.1+dfsg/src/formats/pqrformat.cpp:501:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] snprintf(type_name, sizeof(type_name), " %-3s", tmp); @@ -3962,628 +4007,618 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= -Scanning dependencies of target chemtoolformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build +[ 69%] Linking CXX shared module ../../lib/chemdrawct.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 69%] Built target chem3dformat +make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= Scanning dependencies of target cifformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 67%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/chemtoolformat.dir/chemtoolformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/chemtoolformat.cpp -[ 68%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.o +[ 70%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcifformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cifformat.dir/cifformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cifformat.cpp -[ 69%] Linking CXX shared module ../../lib/orcaformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 69%] Built target orcaformat +[ 70%] Built target chemdrawct make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= -[ 69%] Linking CXX shared module ../../lib/chem3dformat.so +[ 70%] Linking CXX shared module ../../lib/cacaoformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 Scanning dependencies of target featformat -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 69%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.o +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 70%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfeatformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/featformat.dir/featformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/featformat.cpp -[ 69%] Linking CXX shared module ../../lib/hinformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 -[ 69%] Linking CXX shared module ../../lib/chemdrawct.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/hinformat.so CMakeFiles/hinformat.dir/hinformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 69%] Built target chem3dformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 70%] Built target cacaoformat make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= -[ 69%] Built target chemdrawct -make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= +[ 70%] Linking CXX shared module ../../lib/carformat.so Scanning dependencies of target crkformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -Scanning dependencies of target textformat +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/carformat.so CMakeFiles/carformat.dir/carformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 70%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrkformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/crkformat.dir/crkformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/crkformat.cpp +[ 70%] Linking CXX shared module ../../lib/hinformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/hinformat.so CMakeFiles/hinformat.dir/hinformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 71%] Linking CXX shared module ../../lib/tinkerformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 72%] Linking CXX shared module ../../lib/orcaformat.so +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 +[ 72%] Built target hinformat +make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 69%] Built target hinformat -[ 69%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrkformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/crkformat.dir/crkformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/crkformat.cpp +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 72%] Built target carformat make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= -[ 69%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtextformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/textformat.dir/textformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/textformat.cpp Scanning dependencies of target cssrformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 70%] Linking CXX shared module ../lib/plugin_forcefields.so -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 -[ 70%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.o +Scanning dependencies of target textformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 72%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcssrformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/cssrformat.dir/cssrformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/cssrformat.cpp -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 71%] Linking CXX shared module ../../lib/tinkerformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 72%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtextformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/textformat.dir/textformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/textformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 71%] Built target tinkerformat +[ 72%] Built target orcaformat make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend +[ 72%] Linking CXX shared module ../../lib/featformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/featformat.so CMakeFiles/featformat.dir/featformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target dlpolyformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 72%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/dlpolyformat.dir/dlpolyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/dlpolyformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 72%] Built target plugin_forcefields +[ 72%] Built target tinkerformat make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= +[ 73%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/dlpolyformat.dir/dlpolyformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/dlpolyformat.cpp Scanning dependencies of target fhiaimsformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 73%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o +[ 74%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fhiaimsformat.cpp -[ 73%] Linking CXX shared module ../../lib/chemtoolformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 73%] Linking CXX shared module ../../lib/textformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/textformat.so CMakeFiles/textformat.dir/textformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 73%] Linking CXX shared module ../../lib/pqrformat.so -[ 73%] Built target chemtoolformat -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 +[ 74%] Built target featformat make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target exyzformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 73%] Built target textformat +[ 74%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dexyzformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/exyzformat.dir/exyzformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/exyzformat.cpp +[ 74%] Linking CXX shared module ../../lib/chemtoolformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Linking CXX shared module ../../lib/fchkformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Linking CXX shared module ../../lib/molproformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/molproformat.so CMakeFiles/molproformat.dir/molproformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Built target fchkformat make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= -[ 73%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dexyzformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/exyzformat.dir/exyzformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/exyzformat.cpp Scanning dependencies of target fhformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 73%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.o +[ 75%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/fhformat.dir/fhformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/fhformat.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 73%] Linking CXX shared module ../../lib/cssrformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 -[ 73%] Built target pqrformat +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Built target chemtoolformat make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= -[ 73%] Linking CXX shared module ../../lib/molproformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 -[ 74%] Linking CXX shared module ../../lib/fchkformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 -Scanning dependencies of target ghemicalformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/molproformat.so CMakeFiles/molproformat.dir/molproformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 74%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dghemicalformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/ghemicalformat.dir/ghemicalformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/ghemicalformat.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Linking CXX shared module ../../lib/featformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 -[ 74%] Built target cssrformat +[ 75%] Built target molproformat make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/featformat.so CMakeFiles/featformat.dir/featformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target gromos96format +Scanning dependencies of target ghemicalformat make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.o +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dghemicalformat_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/ghemicalformat.dir/ghemicalformat.o -c /build/openbabel-2.4.1+dfsg/src/formats/ghemicalformat.cpp +[ 75%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.o cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgromos96format_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/cairo -I/build/openbabel-2.4.1+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/gromos96format.dir/gromos96format.o -c /build/openbabel-2.4.1+dfsg/src/formats/gromos96format.cpp +[ 75%] Linking CXX shared module ../../lib/pqrformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Built target molproformat -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Built target pqrformat make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= -[ 74%] Built target fchkformat -make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obchiral.dir/DependInfo.cmake --color= -[ 74%] Built target featformat -make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/depend Scanning dependencies of target obspectrophore -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obspectrophore.dir/obspectrophore.o -c /build/openbabel-2.4.1+dfsg/tools/obspectrophore.cpp +[ 75%] Linking CXX shared module ../../lib/textformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/textformat.so CMakeFiles/textformat.dir/textformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Linking CXX shared module ../../lib/crkformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/crkformat.so CMakeFiles/crkformat.dir/crkformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Linking CXX shared module ../../lib/cssrformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Linking CXX shared module ../../lib/vaspformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 75%] Built target crkformat +make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obchiral.dir/DependInfo.cmake --color= Scanning dependencies of target obchiral make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 75%] Building CXX object tools/CMakeFiles/obchiral.dir/obchiral.o +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obchiral.dir/obchiral.o -c /build/openbabel-2.4.1+dfsg/tools/obchiral.cpp +[ 75%] Built target textformat +make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= +[ 75%] Linking CXX shared module ../../lib/fhiaimsformat.so +[ 76%] Linking CXX shared module ../lib/plugin_forcefields.so +cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 Scanning dependencies of target babel make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obspectrophore.dir/obspectrophore.o -c /build/openbabel-2.4.1+dfsg/tools/obspectrophore.cpp -[ 74%] Building CXX object tools/CMakeFiles/obchiral.dir/obchiral.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obchiral.dir/obchiral.o -c /build/openbabel-2.4.1+dfsg/tools/obchiral.cpp -[ 74%] Building CXX object tools/CMakeFiles/babel.dir/babel.o +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../lib/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 76%] Building CXX object tools/CMakeFiles/babel.dir/babel.o cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/babel.dir/babel.o -c /build/openbabel-2.4.1+dfsg/tools/babel.cpp -/build/openbabel-2.4.1+dfsg/tools/babel.cpp:107:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - << __DATE__ << " -- " << __TIME__ << endl; - ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/babel.cpp:107:51: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - << __DATE__ << " -- " << __TIME__ << endl; - ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/babel.cpp:422:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - cout << "Open Babel " << BABEL_VERSION << " -- " << __DATE__ << " -- " - ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/babel.cpp:423:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - << __TIME__ << endl; - ^~~~~~~~ -[ 74%] Linking CXX shared module ../../lib/crkformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/crkformat.so CMakeFiles/crkformat.dir/crkformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 74%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /build/openbabel-2.4.1+dfsg/src/ops/opisomorph.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Linking CXX shared module ../../lib/fhiaimsformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 -[ 74%] Built target crkformat +[ 76%] Built target vaspformat make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz Scanning dependencies of target obabel make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obabel.dir/obabel.o -c /build/openbabel-2.4.1+dfsg/tools/obabel.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:104:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +[ 76%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obabel.dir/obabel.o -c /build/openbabel-2.4.1+dfsg/tools/obabel.cpp +/build/openbabel-2.4.1+dfsg/tools/babel.cpp:107:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] << __DATE__ << " -- " << __TIME__ << endl; ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:104:51: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/openbabel-2.4.1+dfsg/tools/babel.cpp:107:51: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] << __DATE__ << " -- " << __TIME__ << endl; ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:411:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] +/build/openbabel-2.4.1+dfsg/tools/babel.cpp:422:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] cout << "Open Babel " << BABEL_VERSION << " -- " << __DATE__ << " -- " ^~~~~~~~ -/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:412:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] +/build/openbabel-2.4.1+dfsg/tools/babel.cpp:423:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] << __TIME__ << endl; ^~~~~~~~ -[ 74%] Built target fhiaimsformat +[ 76%] Built target cssrformat make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target obrms make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build +[ 76%] Built target fhiaimsformat make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obrms.dir/obrms.o -c /build/openbabel-2.4.1+dfsg/tools/obrms.cpp -[ 74%] Linking CXX shared module ../../lib/fhformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fhformat.so CMakeFiles/fhformat.dir/fhformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 74%] Linking CXX executable ../bin/babel -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/babel.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/babel.dir/babel.o -o ../bin/babel ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 74%] Linking CXX shared module ../../lib/gromos96format.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 74%] Linking CXX executable ../bin/obchiral -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obchiral.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Built target babel make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obchiral.dir/obchiral.o -o ../bin/obchiral ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= +[ 76%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obrms.dir/obrms.o -c /build/openbabel-2.4.1+dfsg/tools/obrms.cpp Scanning dependencies of target obgen make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 76%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.o make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.o cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgen.dir/obgen.o -c /build/openbabel-2.4.1+dfsg/tools/obgen.cpp -[ 74%] Built target fhformat +/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:104:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + << __DATE__ << " -- " << __TIME__ << endl; + ^~~~~~~~ +/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:104:51: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + << __DATE__ << " -- " << __TIME__ << endl; + ^~~~~~~~ +/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:411:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + cout << "Open Babel " << BABEL_VERSION << " -- " << __DATE__ << " -- " + ^~~~~~~~ +/build/openbabel-2.4.1+dfsg/tools/obabel.cpp:412:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + << __TIME__ << endl; + ^~~~~~~~ +[ 76%] Built target plugin_forcefields make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= +Scanning dependencies of target obdistgen make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build +[ 76%] Linking CXX shared module ../../lib/fhformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/fhformat.so CMakeFiles/fhformat.dir/fhformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +[ 76%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obdistgen.dir/obdistgen.o -c /build/openbabel-2.4.1+dfsg/tools/obdistgen.cpp +[ 76%] Linking CXX shared module ../../lib/gromos96format.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Built target gromos96format +[ 76%] Built target fhformat make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= -Scanning dependencies of target obdistgen -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build -[ 74%] Built target obchiral -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend Scanning dependencies of target obconformer make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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/build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obconformer.dir/obconformer.o -c /build/openbabel-2.4.1+dfsg/tools/obconformer.cpp +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 77%] Built target gromos96format +make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= Scanning dependencies of target obprop make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 75%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.o +[ 77%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.o cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obprop.dir/obprop.o -c /build/openbabel-2.4.1+dfsg/tools/obprop.cpp -[ 75%] Linking CXX executable ../bin/obabel -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 -[ 76%] Linking CXX shared module ../../lib/gaussformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obabel.dir/obabel.o -o ../bin/obabel ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz -[ 76%] Linking CXX shared module ../../lib/ghemicalformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 76%] Built target obabel +[ 77%] Linking CXX executable ../bin/obchiral +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obchiral.dir/link.txt --verbose=1 +[ 77%] Built target ghemicalformat make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obchiral.dir/obchiral.o -o ../bin/obchiral ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz Scanning dependencies of target obfit make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.o +[ 78%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.o cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obabel.dir/obabel.o -o ../bin/obabel ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 77%] Built target gaussformat +[ 78%] Built target obchiral make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 77%] Built target ghemicalformat Scanning dependencies of target obrotamer make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 77%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.o +[ 78%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.o cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ 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-Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/babel.dir/babel.o -o ../bin/babel ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 79%] Linking CXX shared module ../../lib/exyzformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 79%] Built target obabel +make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= Scanning dependencies of target obgrep -[ 77%] Linking CXX executable ../bin/obrms -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrms.dir/obrms.o -o ../bin/obrms ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 77%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgrep.dir/obgrep.o -c /build/openbabel-2.4.1+dfsg/tools/obgrep.cpp -[ 78%] Linking CXX shared module ../../lib/exyzformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 78%] Built target obrms +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 79%] Built target babel +[ 79%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.o make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgrep.dir/obgrep.o -c /build/openbabel-2.4.1+dfsg/tools/obgrep.cpp make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= +[ 79%] Linking CXX executable ../bin/obrms +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 Scanning dependencies of target obenergy make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f 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-[ 78%] Linking CXX shared module ../../lib/dlpolyformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined 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-DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obenergy.dir/obenergy.o -c /build/openbabel-2.4.1+dfsg/tools/obenergy.cpp +[ 79%] Built target exyzformat make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= +[ 79%] Linking CXX executable ../bin/obconformer +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 Scanning dependencies of target obthermo make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obthermo.dir/build.make 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/usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obthermo.dir/obthermo.o -c /build/openbabel-2.4.1+dfsg/tools/obthermo.cpp -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgen.dir/obgen.o -o ../bin/obgen ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obconformer.dir/obconformer.o -o ../bin/obconformer ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgen.dir/obgen.o -o ../bin/obgen ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 79%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS 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-Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obdistgen.dir/obdistgen.o -o ../bin/obdistgen ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 80%] Linking CXX shared module ../../lib/MCDLformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm 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src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /build/openbabel-2.4.1+dfsg/src/ops/ophighlight.cpp -[ 80%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && 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obgen +[ 80%] Built target obconformer make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprop.dir/obprop.o -o ../bin/obprop ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 80%] Built target obgen +make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= Scanning dependencies of target obprobe make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target obrotate make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 81%] Built target obconformer -make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend +make[4]: Leaving directory 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-isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obprobe.dir/obprobe.o -c /build/openbabel-2.4.1+dfsg/tools/obprobe.cpp Scanning dependencies of target obsym make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 80%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obprobe.dir/obprobe.o -c /build/openbabel-2.4.1+dfsg/tools/obprobe.cpp +[ 80%] Linking CXX executable ../bin/obspectrophore +[ 81%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 [ 81%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL 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/usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obsym.dir/obsym.o -c /build/openbabel-2.4.1+dfsg/tools/obsym.cpp +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.o -o ../bin/obspectrophore ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 81%] Built target obprop +[ 81%] Linking CXX shared module ../../lib/dlpolyformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 +[ 81%] Built target MCDLformat make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Scanning dependencies of target obminimize make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 82%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obminimize.dir/obminimize.o -c /build/openbabel-2.4.1+dfsg/tools/obminimize.cpp -[ 82%] Linking CXX executable ../bin/obrotamer -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotamer.dir/obrotamer.o -o ../bin/obrotamer ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 82%] Linking CXX executable ../bin/obfit -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 -[ 82%] Built target obrotamer +[ 81%] Built target obdistgen make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend +[ 82%] Linking CXX executable ../bin/obprop make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfit.dir/obfit.o -o ../bin/obfit ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 83%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obminimize.dir/obminimize.o -c /build/openbabel-2.4.1+dfsg/tools/obminimize.cpp Scanning dependencies of target obtautomer make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 82%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.o -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obtautomer.dir/obtautomer.o -c /build/openbabel-2.4.1+dfsg/tools/obtautomer.cpp -[ 83%] Linking CXX executable ../bin/obgrep -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgrep.dir/obgrep.o -o ../bin/obgrep ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 83%] Linking CXX executable ../bin/obdistgen -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 -[ 83%] Linking CXX executable ../bin/obenergy -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obdistgen.dir/obdistgen.o -o ../bin/obdistgen ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obenergy.dir/obenergy.o -o ../bin/obenergy ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 83%] Built target obfit +[ 83%] Built target obspectrophore make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend -[ 83%] Linking CXX executable ../bin/obspectrophore -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprop.dir/obprop.o -o ../bin/obprop ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/GUI /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/GUI /build/openbabel-2.4.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.o -o ../bin/obspectrophore ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 83%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.o +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obtautomer.dir/obtautomer.o -c /build/openbabel-2.4.1+dfsg/tools/obtautomer.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +Scanning dependencies of target obgui make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 83%] Built target obgrep +make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build +[ 83%] Built target dlpolyformat make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 83%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/OBGUI.o -c /build/openbabel-2.4.1+dfsg/src/GUI/OBGUI.cpp Scanning dependencies of target test_inchiwrite make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 83%] Linking CXX executable ../bin/obthermo -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 -[ 83%] Built target obenergy -Scanning dependencies of target obgui -make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' [ 84%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /build/openbabel-2.4.1+dfsg/test/inchiwrite.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obthermo.dir/obthermo.o -o ../bin/obthermo ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 84%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/OBGUI.o -c /build/openbabel-2.4.1+dfsg/src/GUI/OBGUI.cpp -[ 84%] Built target obdistgen -make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend +[ 84%] Built target obprop +make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= Scanning dependencies of target test_runner make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build -Scanning dependencies of target roundtrip -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/test_runner.o -c /build/openbabel-2.4.1+dfsg/builddir/test/test_runner.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Linking CXX executable ../bin/obsym +[ 84%] Linking CXX executable ../bin/obrotamer +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 +[ 84%] Linking CXX executable ../bin/obthermo +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotamer.dir/obrotamer.o -o ../bin/obrotamer ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obthermo.dir/obthermo.o -o ../bin/obthermo ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 85%] Linking CXX executable ../bin/obgrep +[ 85%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/aligntest.o -c /build/openbabel-2.4.1+dfsg/test/aligntest.cpp +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgrep.dir/obgrep.o -o ../bin/obgrep ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 85%] Linking CXX executable ../bin/obfit +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 +[ 86%] Linking CXX shared module ../../lib/gaussformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obfit.dir/obfit.o -o ../bin/obfit ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 87%] Linking CXX executable ../bin/obsym cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 -[ 85%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/roundtrip.dir/roundtrip.o -c /build/openbabel-2.4.1+dfsg/test/roundtrip.cpp -[ 85%] Built target obspectrophore -[ 85%] Built target obthermo +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obsym.dir/obsym.o -o ../bin/obsym ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 87%] Built target obthermo +make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= +[ 87%] Built target obrotamer make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obsym.dir/obsym.o -o ../bin/obsym ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 85%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/xout.o -c /build/openbabel-2.4.1+dfsg/src/ops/xout.cpp -[ 85%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/aligntest.o -c /build/openbabel-2.4.1+dfsg/test/aligntest.cpp -Scanning dependencies of target bindings_perl +Scanning dependencies of target roundtrip make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build +make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Linking CXX executable ../bin/obrotate -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotate.dir/obrotate.o -o ../bin/obrotate ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 85%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -cd /build/openbabel-2.4.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_perl_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python2.7 -I/usr/lib/x86_64-linux-gnu/perl/5.28/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /build/openbabel-2.4.1+dfsg/scripts/perl/openbabel-perl.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Linking CXX executable ../bin/obprobe -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 -[ 85%] Built target obsym +[ 87%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/roundtrip.dir/roundtrip.o -c /build/openbabel-2.4.1+dfsg/test/roundtrip.cpp +[ 87%] Built target obgrep make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprobe.dir/obprobe.o -o ../bin/obprobe ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/conformer.o -c /build/openbabel-2.4.1+dfsg/src/ops/conformer.cpp +Scanning dependencies of target bindings_perl +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 87%] Built target obsym Scanning dependencies of target bindings_python -[ 85%] Linking CXX executable ../bin/obminimize make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 87%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build -cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 -[ 85%] Built target obrotate -make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obminimize.dir/obminimize.o -o ../bin/obminimize ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 85%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.o +cd /build/openbabel-2.4.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_perl_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python2.7 -I/usr/lib/x86_64-linux-gnu/perl/5.28/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /build/openbabel-2.4.1+dfsg/scripts/perl/openbabel-perl.cpp +[ 87%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.o cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/qtpie.o -c /build/openbabel-2.4.1+dfsg/src/charges/qtpie.cpp -[ 85%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o +make[4]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 87%] Built target obfit +[ 87%] Linking CXX executable ../bin/obrotate +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 +[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.o +[ 87%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o cd /build/openbabel-2.4.1+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_python_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/usr/include/python2.7 -I/usr/lib/x86_64-linux-gnu/perl/5.28/CORE -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -c /build/openbabel-2.4.1+dfsg/scripts/python/openbabel-python.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Built target obprobe -[ 85%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/stdwx.o -c /build/openbabel-2.4.1+dfsg/src/GUI/stdwx.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 85%] Built target obminimize -[ 85%] Linking CXX executable ../bin/obtautomer +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/automorphismtest.o -c /build/openbabel-2.4.1+dfsg/test/automorphismtest.cpp +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obrotate.dir/obrotate.o -o ../bin/obrotate ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 87%] Linking CXX executable ../bin/obenergy +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obenergy.dir/obenergy.o -o ../bin/obenergy ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 87%] Linking CXX executable ../bin/obtautomer cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obtautomer.dir/obtautomer.o -o ../bin/obtautomer ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 85%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /build/openbabel-2.4.1+dfsg/src/ops/opalign.cpp -[ 86%] Linking CXX shared module ../../lib/MCDLformat.so -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 86%] Built target obtautomer -[ 86%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/automorphismtest.o -c /build/openbabel-2.4.1+dfsg/test/automorphismtest.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 86%] Linking CXX executable ../bin/roundtrip -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 -[ 86%] Built target MCDLformat -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 86%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o +[ 87%] Linking CXX executable ../bin/obprobe +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 +[ 87%] Built target gaussformat +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obprobe.dir/obprobe.o -o ../bin/obprobe ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 87%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o +[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/buildertest.o -c /build/openbabel-2.4.1+dfsg/test/buildertest.cpp cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /build/openbabel-2.4.1+dfsg/src/formats/getinchi.cpp -[ 86%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.o -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -fPIC -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opconfab.o -c /build/openbabel-2.4.1+dfsg/src/ops/opconfab.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 86%] Built target roundtrip -[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/buildertest.o -c /build/openbabel-2.4.1+dfsg/test/buildertest.cpp -[ 87%] Linking CXX executable ../bin/test_inchiwrite -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -[ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.o -cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/optswx.o -c /build/openbabel-2.4.1+dfsg/src/GUI/optswx.cpp +[ 88%] Built target obrotate +[ 88%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.o +cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/stdwx.o -c /build/openbabel-2.4.1+dfsg/src/GUI/stdwx.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 87%] Built target test_inchiwrite -[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.o +[ 88%] Built target obenergy +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 88%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.o +[ 88%] Built target obprobe +cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/src/GUI/. -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/optswx.o -c /build/openbabel-2.4.1+dfsg/src/GUI/optswx.cpp +[ 88%] Built target obtautomer +[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/canonconsistenttest.o -c /build/openbabel-2.4.1+dfsg/test/canonconsistenttest.cpp -[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.o +[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/canonstabletest.o -c /build/openbabel-2.4.1+dfsg/test/canonstabletest.cpp -[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.o +[ 88%] Linking CXX executable ../bin/test_inchiwrite +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 88%] Linking CXX executable ../bin/roundtrip +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +[ 88%] Built target test_inchiwrite +[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/carspacegrouptest.o -c /build/openbabel-2.4.1+dfsg/test/carspacegrouptest.cpp -[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.o +[ 88%] Linking CXX executable ../bin/obminimize +cd /build/openbabel-2.4.1+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obminimize.dir/obminimize.o -o ../bin/obminimize ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 88%] Built target roundtrip +[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/cifspacegrouptest.o -c /build/openbabel-2.4.1+dfsg/test/cifspacegrouptest.cpp -[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.o +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 88%] Built target obminimize +[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/cistranstest.o -c /build/openbabel-2.4.1+dfsg/test/cistranstest.cpp -[ 88%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.o +[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/graphsymtest.o -c /build/openbabel-2.4.1+dfsg/test/graphsymtest.cpp -[ 89%] Linking CXX shared module ../lib/plugin_ops.so -cd /build/openbabel-2.4.1+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 -[ 89%] Linking CXX shared 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CMakeFiles/plugin_ops.dir/ops/opsplit.o CMakeFiles/plugin_ops.dir/ops/optransform.o CMakeFiles/plugin_ops.dir/ops/partialcharges.o CMakeFiles/plugin_ops.dir/ops/readconformers.o CMakeFiles/plugin_ops.dir/ops/sort.o CMakeFiles/plugin_ops.dir/ops/opisomorph.o CMakeFiles/plugin_ops.dir/ops/ophighlight.o CMakeFiles/plugin_ops.dir/ops/xout.o CMakeFiles/plugin_ops.dir/ops/conformer.o CMakeFiles/plugin_ops.dir/ops/opalign.o CMakeFiles/plugin_ops.dir/ops/opconfab.o -lm -ldl -lz ../lib/libopenbabel.so.5.0.0 -lm -ldl -lz -cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cifformat.so CMakeFiles/cifformat.dir/cifformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/gziptest.o -c /build/openbabel-2.4.1+dfsg/test/gziptest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/implicitHtest.o -c /build/openbabel-2.4.1+dfsg/test/implicitHtest.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 89%] Built target cifformat +[ 89%] Linking CXX shared module ../../lib/cifformat.so +cd /build/openbabel-2.4.1+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -o ../../lib/cifformat.so CMakeFiles/cifformat.dir/cifformat.o -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/lssrtest.o -c /build/openbabel-2.4.1+dfsg/test/lssrtest.cpp make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 89%] Built target plugin_ops +[ 89%] Built target cifformat [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/isomorphismtest.o -c /build/openbabel-2.4.1+dfsg/test/isomorphismtest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.o @@ -4629,26 +4664,24 @@ [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/conversion.o -c /build/openbabel-2.4.1+dfsg/test/conversion.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/datatest.o -c /build/openbabel-2.4.1+dfsg/test/datatest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/datatest.o -c /build/openbabel-2.4.1+dfsg/test/datatest.cpp cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/ffgaff.o -c /build/openbabel-2.4.1+dfsg/test/ffgaff.cpp -[ 94%] Linking CXX executable ../../bin/obgui -cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgui.dir/OBGUI.o CMakeFiles/obgui.dir/stdwx.o CMakeFiles/obgui.dir/optswx.o -o ../../bin/obgui ../../lib/libopenbabel.so.5.0.0 -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk2u_core-3.0 -lwx_gtk2u_adv-3.0 -lm -ldl -lz [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/ffghemical.o -c /build/openbabel-2.4.1+dfsg/test/ffghemical.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/ffmmff94.o -c /build/openbabel-2.4.1+dfsg/test/ffmmff94.cpp -[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.o [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/ffuff.o -c /build/openbabel-2.4.1+dfsg/test/ffuff.cpp -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/formalcharge.o -c /build/openbabel-2.4.1+dfsg/test/formalcharge.cpp -make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/format.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/format.o -c /build/openbabel-2.4.1+dfsg/test/format.cpp -[ 95%] Built target obgui +[ 95%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/formalcharge.o -c /build/openbabel-2.4.1+dfsg/test/formalcharge.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/formula.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/formula.o -c /build/openbabel-2.4.1+dfsg/test/formula.cpp +[ 95%] Linking CXX executable ../../bin/obgui +cd /build/openbabel-2.4.1+dfsg/builddir/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -rdynamic CMakeFiles/obgui.dir/OBGUI.o CMakeFiles/obgui.dir/stdwx.o CMakeFiles/obgui.dir/optswx.o -o ../../bin/obgui ../../lib/libopenbabel.so.5.0.0 -L/usr/lib/x86_64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk2u_core-3.0 -lwx_gtk2u_adv-3.0 -lm -ldl -lz [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/internalcoord.o -c /build/openbabel-2.4.1+dfsg/test/internalcoord.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.o @@ -4659,6 +4692,8 @@ cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/iterators.o -c /build/openbabel-2.4.1+dfsg/test/iterators.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/logp_psa.o -c /build/openbabel-2.4.1+dfsg/test/logp_psa.cpp +make[4]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 96%] Built target obgui [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/math.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/math.o -c /build/openbabel-2.4.1+dfsg/test/math.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/mol.o @@ -4667,10 +4702,10 @@ cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/phmodel.o -c /build/openbabel-2.4.1+dfsg/test/phmodel.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/residue.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/residue.o -c /build/openbabel-2.4.1+dfsg/test/residue.cpp -[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.o -cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/smartstest.o -c /build/openbabel-2.4.1+dfsg/test/smartstest.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/ringtest.o -c /build/openbabel-2.4.1+dfsg/test/ringtest.cpp +[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.o +cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/smartstest.o -c /build/openbabel-2.4.1+dfsg/test/smartstest.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.o cd /build/openbabel-2.4.1+dfsg/builddir/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/build/openbabel-2.4.1+dfsg/builddir/include -I/build/openbabel-2.4.1+dfsg/data -I/build/openbabel-2.4.1+dfsg/include -I/usr/include/eigen3 -I/build/openbabel-2.4.1+dfsg/test -isystem /usr/lib/x86_64-linux-gnu/wx/include/gtk2-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -ffile-prefix-map=/build/openbabel-2.4.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -DOB_MODULE_PATH="\"/usr/lib/openbabel/2.4.1\"" -DTESTDATADIR="\"/build/openbabel-2.4.1+dfsg/test/files/\"" -DFORMATDIR="\"/build/openbabel-2.4.1+dfsg/builddir/lib//\"" -DTESTDIR=/build/openbabel-2.4.1+dfsg/test -o CMakeFiles/test_runner.dir/smartsparse.o -c /build/openbabel-2.4.1+dfsg/test/smartsparse.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.o @@ -4758,9 +4793,9 @@ /build/openbabel-2.4.1+dfsg/include/openbabel/data.h:318: warning: argument 'dhof1' of command @param is not found in the argument list of OBAtomicHeatOfFormationTable::GetHeatOfFormation(std::string elem, int charge, std::string method, double T, double *dhof0, double *dhofT, double *S0T) /build/openbabel-2.4.1+dfsg/include/openbabel/data.h:330: warning: The following parameters of OpenBabel::OBAtomicHeatOfFormationTable::GetHeatOfFormation(std::string elem, int charge, std::string method, double T, double *dhof0, double *dhofT, double *S0T) are not documented: parameter 'dhofT' -sh: 1: latex: not found +sh: latex: command not found error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log! -sh: 1: dvips: not found +sh: dvips: command not found error: Problems running dvips. Check your installation! make[5]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' Built target docs @@ -4774,10 +4809,10 @@ BABEL_LIBDIR=/build/openbabel-2.4.1+dfsg/builddir/lib \ LD_LIBRARY_PATH=/build/openbabel-2.4.1+dfsg/builddir/lib \ dh_auto_test - cd builddir && make -j15 test ARGS\+=-j15 + cd builddir && make -j16 test ARGS\+=-j16 make[2]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' Running tests... -/usr/bin/ctest --force-new-ctest-process -j15 +/usr/bin/ctest --force-new-ctest-process -j16 Test project /build/openbabel-2.4.1+dfsg/builddir Start 1: test_align_1 Start 2: test_align_2 @@ -4794,321 +4829,319 @@ Start 13: test_automorphism_8 Start 14: test_automorphism_9 Start 15: test_automorphism_10 - 1/160 Test #1: test_align_1 ..................... Passed 0.03 sec Start 16: test_builder_1 - 2/160 Test #2: test_align_2 ..................... Passed 0.05 sec + 1/160 Test #1: test_align_1 ..................... Passed 0.03 sec Start 17: test_builder_2 - 3/160 Test #3: test_align_3 ..................... Passed 0.06 sec + 2/160 Test #2: test_align_2 ..................... Passed 0.05 sec Start 18: test_builder_3 - 4/160 Test #6: test_automorphism_1 .............. Passed 0.07 sec + 3/160 Test #3: test_align_3 ..................... Passed 0.05 sec Start 19: test_builder_4 - 5/160 Test #7: test_automorphism_2 .............. Passed 0.07 sec + 4/160 Test #5: test_align_5 ..................... Passed 0.06 sec Start 20: test_builder_5 - 6/160 Test #8: test_automorphism_3 .............. Passed 0.07 sec + 5/160 Test #6: test_automorphism_1 .............. Passed 0.07 sec Start 21: test_canonconsistent_1 - 7/160 Test #4: test_align_4 ..................... Passed 0.07 sec + 6/160 Test #7: test_automorphism_2 .............. Passed 0.07 sec Start 22: test_canonconsistent_2 - 8/160 Test #5: test_align_5 ..................... Passed 0.07 sec + 7/160 Test #10: test_automorphism_5 .............. Passed 0.08 sec Start 23: test_canonconsistent_3 - 9/160 Test #9: test_automorphism_4 .............. Passed 0.09 sec + 8/160 Test #8: test_automorphism_3 .............. Passed 0.08 sec Start 24: test_canonstable_1 - 10/160 Test #10: test_automorphism_5 .............. Passed 0.09 sec + 9/160 Test #9: test_automorphism_4 .............. Passed 0.08 sec Start 25: test_carspacegroup_1 - 11/160 Test #12: test_automorphism_7 .............. Passed 0.08 sec + 10/160 Test #11: test_automorphism_6 .............. Passed 0.08 sec Start 26: test_carspacegroup_2 - 12/160 Test #11: test_automorphism_6 .............. Passed 0.09 sec + 11/160 Test #4: test_align_4 ..................... Passed 0.09 sec Start 27: test_carspacegroup_3 - 13/160 Test #13: test_automorphism_8 .............. Passed 0.08 sec + 12/160 Test #13: test_automorphism_8 .............. Passed 0.07 sec Start 28: test_carspacegroup_4 - 14/160 Test #15: test_automorphism_10 ............. Passed 0.08 sec + 13/160 Test #14: test_automorphism_9 .............. Passed 0.09 sec Start 29: test_cifspacegroup_1 - 15/160 Test #14: test_automorphism_9 .............. Passed 0.08 sec + 14/160 Test #12: test_automorphism_7 .............. Passed 0.09 sec Start 30: test_cifspacegroup_2 - 16/160 Test #22: test_canonconsistent_2 ........... Passed 0.10 sec + 15/160 Test #15: test_automorphism_10 ............. Passed 0.09 sec Start 31: test_cifspacegroup_3 - 17/160 Test #25: test_carspacegroup_1 ............. Passed 0.10 sec + 16/160 Test #31: test_cifspacegroup_3 ............. Passed 0.02 sec Start 32: test_cifspacegroup_4 - 18/160 Test #31: test_cifspacegroup_3 ............. Passed 0.02 sec + 17/160 Test #25: test_carspacegroup_1 ............. Passed 0.09 sec Start 33: test_cistrans_1 - 19/160 Test #33: test_cistrans_1 .................. Passed 0.02 sec + 18/160 Test #22: test_canonconsistent_2 ........... Passed 0.12 sec Start 34: test_cistrans_2 - 20/160 Test #34: test_cistrans_2 .................. Passed 0.02 sec + 19/160 Test #33: test_cistrans_1 .................. Passed 0.03 sec Start 35: test_cistrans_3 - 21/160 Test #35: test_cistrans_3 .................. Passed 0.02 sec + 20/160 Test #34: test_cistrans_2 .................. Passed 0.03 sec Start 36: test_cistrans_4 - 22/160 Test #23: test_canonconsistent_3 ........... Passed 0.18 sec + 21/160 Test #23: test_canonconsistent_3 ........... Passed 0.16 sec Start 37: test_cistrans_5 - 23/160 Test #36: test_cistrans_4 .................. Passed 0.02 sec + 22/160 Test #35: test_cistrans_3 .................. Passed 0.04 sec Start 38: test_cistrans_6 - 24/160 Test #37: test_cistrans_5 .................. Passed 0.03 sec + 23/160 Test #36: test_cistrans_4 .................. Passed 0.04 sec Start 39: test_cistrans_7 - 25/160 Test #38: test_cistrans_6 .................. Passed 0.15 sec + 24/160 Test #37: test_cistrans_5 .................. Passed 0.02 sec Start 40: test_cistrans_8 - 26/160 Test #20: test_builder_5 ................... Passed 0.38 sec + 25/160 Test #20: test_builder_5 ................... Passed 0.30 sec Start 41: test_cistrans_9 - 27/160 Test #39: test_cistrans_7 .................. Passed 0.17 sec + 26/160 Test #38: test_cistrans_6 .................. Passed 0.17 sec Start 42: test_graphsym_1 - 28/160 Test #19: test_builder_4 ................... Passed 0.48 sec + 27/160 Test #39: test_cistrans_7 .................. Passed 0.18 sec Start 43: test_graphsym_2 - 29/160 Test #18: test_builder_3 ................... Passed 0.55 sec + 28/160 Test #40: test_cistrans_8 .................. Passed 0.18 sec Start 44: test_graphsym_3 - 30/160 Test #40: test_cistrans_8 .................. Passed 0.18 sec + 29/160 Test #19: test_builder_4 ................... Passed 0.44 sec Start 45: test_graphsym_4 - 31/160 Test #41: test_cistrans_9 .................. Passed 0.18 sec + 30/160 Test #18: test_builder_3 ................... Passed 0.48 sec Start 46: test_graphsym_5 - 32/160 Test #42: test_graphsym_1 .................. Passed 0.24 sec + 31/160 Test #41: test_cistrans_9 .................. Passed 0.18 sec Start 47: test_gzip_1 - 33/160 Test #43: test_graphsym_2 .................. Passed 0.20 sec + 32/160 Test #43: test_graphsym_2 .................. Passed 0.18 sec Start 48: test_implicitH_1 - 34/160 Test #44: test_graphsym_3 .................. Passed 0.20 sec + 33/160 Test #42: test_graphsym_1 .................. Passed 0.25 sec Start 49: test_lssr_1 - 35/160 Test #45: test_graphsym_4 .................. Passed 0.20 sec + 34/160 Test #44: test_graphsym_3 .................. Passed 0.23 sec Start 50: test_lssr_2 - 36/160 Test #46: test_graphsym_5 .................. Passed 0.20 sec + 35/160 Test #45: test_graphsym_4 .................. Passed 0.22 sec Start 51: test_lssr_3 - 37/160 Test #21: test_canonconsistent_1 ........... Passed 0.88 sec + 36/160 Test #46: test_graphsym_5 .................. Passed 0.20 sec Start 52: test_lssr_4 - 38/160 Test #48: test_implicitH_1 ................. Passed 0.23 sec + 37/160 Test #48: test_implicitH_1 ................. Passed 0.21 sec Start 53: test_lssr_5 - 39/160 Test #53: test_lssr_5 ...................... Passed 0.25 sec + 38/160 Test #21: test_canonconsistent_1 ........... Passed 0.83 sec Start 54: test_isomorphism_1 - 40/160 Test #49: test_lssr_1 ...................... Passed 0.52 sec + 39/160 Test #53: test_lssr_5 ...................... Passed 0.25 sec Start 55: test_isomorphism_2 - 41/160 Test #54: test_isomorphism_1 ............... Passed 0.18 sec + 40/160 Test #54: test_isomorphism_1 ............... Passed 0.21 sec Start 56: test_isomorphism_3 - 42/160 Test #55: test_isomorphism_2 ............... Passed 0.19 sec + 41/160 Test #49: test_lssr_1 ...................... Passed 0.48 sec Start 57: test_isomorphism_4 - 43/160 Test #26: test_carspacegroup_2 ............. Passed 1.46 sec + 42/160 Test #55: test_isomorphism_2 ............... Passed 0.24 sec Start 58: test_isomorphism_5 - 44/160 Test #28: test_carspacegroup_4 ............. Passed 1.51 sec + 43/160 Test #47: test_gzip_1 ...................... Passed 0.80 sec Start 59: test_isomorphism_6 - 45/160 Test #27: test_carspacegroup_3 ............. Passed 1.53 sec + 44/160 Test #57: test_isomorphism_4 ............... Passed 0.20 sec Start 60: test_isomorphism_7 - 46/160 Test #29: test_cifspacegroup_1 ............. Passed 1.52 sec + 45/160 Test #56: test_isomorphism_3 ............... Passed 0.27 sec Start 61: test_isomorphism_8 - 47/160 Test #47: test_gzip_1 ...................... Passed 0.94 sec + 46/160 Test #29: test_cifspacegroup_1 ............. Passed 1.29 sec Start 62: test_multicml_1 - 48/160 Test #56: test_isomorphism_3 ............... Passed 0.26 sec + 47/160 Test #58: test_isomorphism_5 ............... Passed 0.19 sec Start 63: test_regressions_1 - 49/160 Test #57: test_isomorphism_4 ............... Passed 0.18 sec + 48/160 Test #59: test_isomorphism_6 ............... Passed 0.20 sec Start 64: test_regressions_221 - 50/160 Test #30: test_cifspacegroup_2 ............. Passed 1.60 sec + 49/160 Test #61: test_isomorphism_8 ............... Passed 0.18 sec Start 65: test_regressions_222 - 51/160 Test #58: test_isomorphism_5 ............... Passed 0.18 sec + 50/160 Test #60: test_isomorphism_7 ............... Passed 0.24 sec Start 66: test_regressions_223 - 52/160 Test #59: test_isomorphism_6 ............... Passed 0.18 sec + 51/160 Test #62: test_multicml_1 .................. Passed 0.24 sec Start 67: test_regressions_224 - 53/160 Test #60: test_isomorphism_7 ............... Passed 0.19 sec + 52/160 Test #27: test_carspacegroup_3 ............. Passed 1.56 sec Start 68: test_rotor_1 - 54/160 Test #61: test_isomorphism_8 ............... Passed 0.18 sec + 53/160 Test #32: test_cifspacegroup_4 ............. Passed 1.53 sec Start 69: test_rotor_2 - 55/160 Test #62: test_multicml_1 .................. Passed 0.18 sec + 54/160 Test #68: test_rotor_1 ..................... Passed 0.03 sec Start 70: test_rotor_3 - 56/160 Test #68: test_rotor_1 ..................... Passed 0.04 sec + 55/160 Test #26: test_carspacegroup_2 ............. Passed 1.61 sec Start 71: test_rotor_4 - 57/160 Test #32: test_cifspacegroup_4 ............. Passed 1.68 sec + 56/160 Test #63: test_regressions_1 ............... Passed 0.18 sec Start 72: test_shuffle_1 - 58/160 Test #64: test_regressions_221 ............. Passed 0.20 sec + 57/160 Test #65: test_regressions_222 ............. Passed 0.17 sec Start 73: test_shuffle_2 - 59/160 Test #63: test_regressions_1 ............... Passed 0.24 sec + 58/160 Test #64: test_regressions_221 ............. Passed 0.21 sec Start 74: test_shuffle_3 - 60/160 Test #65: test_regressions_222 ............. Passed 0.21 sec + 59/160 Test #28: test_carspacegroup_4 ............. Passed 1.68 sec Start 75: test_shuffle_4 - 61/160 Test #67: test_regressions_224 ............. Passed 0.20 sec + 60/160 Test #66: test_regressions_223 ............. Passed 0.20 sec Start 76: test_shuffle_5 - 62/160 Test #69: test_rotor_2 ..................... Passed 0.18 sec + 61/160 Test #67: test_regressions_224 ............. Passed 0.18 sec Start 77: test_smiles_1 - 63/160 Test #66: test_regressions_223 ............. Passed 0.28 sec + 62/160 Test #70: test_rotor_3 ..................... Passed 0.18 sec Start 78: test_smiles_2 - 64/160 Test #70: test_rotor_3 ..................... Passed 0.20 sec + 63/160 Test #69: test_rotor_2 ..................... Passed 0.21 sec Start 79: test_smiles_3 - 65/160 Test #71: test_rotor_4 ..................... Passed 0.21 sec + 64/160 Test #30: test_cifspacegroup_2 ............. Passed 1.78 sec Start 80: test_spectrophore_1 - 66/160 Test #77: test_smiles_1 .................... Passed 0.20 sec + 65/160 Test #71: test_rotor_4 ..................... Passed 0.22 sec Start 81: test_spectrophore_2 - 67/160 Test #78: test_smiles_2 .................... Passed 0.20 sec + 66/160 Test #78: test_smiles_2 .................... Passed 0.12 sec Start 82: test_spectrophore_3 - 68/160 Test #75: test_shuffle_4 ................... Passed 0.35 sec + 67/160 Test #77: test_smiles_1 .................... Passed 0.19 sec Start 83: test_spectrophore_4 - 69/160 Test #79: test_smiles_3 .................... Passed 0.26 sec + 68/160 Test #81: test_spectrophore_2 .............. Passed 0.11 sec Start 84: test_spectrophore_5 - 70/160 Test #81: test_spectrophore_2 .............. Passed 0.12 sec + 69/160 Test #75: test_shuffle_4 ................... Passed 0.26 sec Start 85: test_squareplanar_1 - 71/160 Test #82: test_spectrophore_3 .............. Passed 0.12 sec + 70/160 Test #82: test_spectrophore_3 .............. Passed 0.08 sec Start 86: test_squareplanar_2 - 72/160 Test #85: test_squareplanar_1 .............. Passed 0.04 sec + 71/160 Test #85: test_squareplanar_1 .............. Passed 0.04 sec Start 87: test_squareplanar_3 - 73/160 Test #86: test_squareplanar_2 .............. Passed 0.05 sec + 72/160 Test #86: test_squareplanar_2 .............. Passed 0.03 sec Start 88: test_squareplanar_4 - 74/160 Test #84: test_spectrophore_5 .............. Passed 0.10 sec + 73/160 Test #79: test_smiles_3 .................... Passed 0.22 sec Start 89: test_squareplanar_5 - 75/160 Test #87: test_squareplanar_3 .............. Passed 0.06 sec + 74/160 Test #87: test_squareplanar_3 .............. Passed 0.04 sec Start 90: test_stereo_1 - 76/160 Test #88: test_squareplanar_4 .............. Passed 0.05 sec + 75/160 Test #83: test_spectrophore_4 .............. Passed 0.12 sec Start 91: test_stereo_2 - 77/160 Test #83: test_spectrophore_4 .............. Passed 0.16 sec + 76/160 Test #84: test_spectrophore_5 .............. Passed 0.12 sec Start 92: test_stereo_3 - 78/160 Test #89: test_squareplanar_5 .............. Passed 0.04 sec + 77/160 Test #88: test_squareplanar_4 .............. Passed 0.08 sec Start 93: test_stereo_4 - 79/160 Test #90: test_stereo_1 .................... Passed 0.07 sec + 78/160 Test #89: test_squareplanar_5 .............. Passed 0.07 sec Start 94: test_stereo_5 - 80/160 Test #91: test_stereo_2 .................... Passed 0.06 sec + 79/160 Test #90: test_stereo_1 .................... Passed 0.08 sec Start 95: test_stereo_6 - 81/160 Test #92: test_stereo_3 .................... Passed 0.04 sec + 80/160 Test #91: test_stereo_2 .................... Passed 0.07 sec Start 96: test_stereoperception_1 - 82/160 Test #93: test_stereo_4 .................... Passed 0.06 sec + 81/160 Test #92: test_stereo_3 .................... Passed 0.05 sec Start 97: test_stereoperception_2 - 83/160 Test #94: test_stereo_5 .................... Passed 0.06 sec + 82/160 Test #93: test_stereo_4 .................... Passed 0.04 sec Start 98: test_stereoperception_3 - 84/160 Test #76: test_shuffle_5 ................... Passed 0.64 sec + 83/160 Test #94: test_stereo_5 .................... Passed 0.07 sec Start 99: test_stereoperception_4 - 85/160 Test #96: test_stereoperception_1 .......... Passed 0.19 sec + 84/160 Test #96: test_stereoperception_1 .......... Passed 0.18 sec Start 100: test_tautomer_1 - 86/160 Test #97: test_stereoperception_2 .......... Passed 0.19 sec + 85/160 Test #97: test_stereoperception_2 .......... Passed 0.19 sec Start 101: test_tautomer_2 - 87/160 Test #98: test_stereoperception_3 .......... Passed 0.20 sec + 86/160 Test #99: test_stereoperception_4 .......... Passed 0.18 sec Start 102: test_tetrahedral_1 - 88/160 Test #102: test_tetrahedral_1 ............... Passed 0.03 sec + 87/160 Test #98: test_stereoperception_3 .......... Passed 0.21 sec Start 103: test_tetrahedral_2 - 89/160 Test #99: test_stereoperception_4 .......... Passed 0.17 sec + 88/160 Test #102: test_tetrahedral_1 ............... Passed 0.03 sec Start 104: test_tetrahedral_3 - 90/160 Test #103: test_tetrahedral_2 ............... Passed 0.04 sec + 89/160 Test #103: test_tetrahedral_2 ............... Passed 0.03 sec Start 105: test_tetrahedral_4 - 91/160 Test #104: test_tetrahedral_3 ............... Passed 0.03 sec + 90/160 Test #104: test_tetrahedral_3 ............... Passed 0.04 sec Start 106: test_tetrahedral_5 - 92/160 Test #74: test_shuffle_3 ................... Passed 0.94 sec + 91/160 Test #105: test_tetrahedral_4 ............... Passed 0.04 sec Start 107: test_tetranonplanar_1 - 93/160 Test #105: test_tetrahedral_4 ............... Passed 0.05 sec + 92/160 Test #74: test_shuffle_3 ................... Passed 0.80 sec Start 108: test_tetraplanar_1 - 94/160 Test #106: test_tetrahedral_5 ............... Passed 0.05 sec + 93/160 Test #106: test_tetrahedral_5 ............... Passed 0.06 sec Start 109: test_uniqueid_1 - 95/160 Test #107: test_tetranonplanar_1 ............ Passed 0.03 sec + 94/160 Test #76: test_shuffle_5 ................... Passed 0.78 sec Start 110: test_uniqueid_2 - 96/160 Test #108: test_tetraplanar_1 ............... Passed 0.04 sec + 95/160 Test #107: test_tetranonplanar_1 ............ Passed 0.06 sec Start 111: test_aromatest_1 - 97/160 Test #100: test_tautomer_1 .................. Passed 0.20 sec + 96/160 Test #108: test_tetraplanar_1 ............... Passed 0.04 sec Start 112: test_atom_1 - 98/160 Test #109: test_uniqueid_1 .................. Passed 0.06 sec + 97/160 Test #100: test_tautomer_1 .................. Passed 0.23 sec Start 113: test_atom_2 - 99/160 Test #110: test_uniqueid_2 .................. Passed 0.05 sec + 98/160 Test #109: test_uniqueid_1 .................. Passed 0.06 sec Start 114: test_atom_3 -100/160 Test #101: test_tautomer_2 .................. Passed 0.21 sec + 99/160 Test #110: test_uniqueid_2 .................. Passed 0.05 sec Start 115: test_atom_4 -101/160 Test #112: test_atom_1 ...................... Passed 0.03 sec +100/160 Test #101: test_tautomer_2 .................. Passed 0.27 sec Start 116: test_bond_1 -102/160 Test #113: test_atom_2 ...................... Passed 0.06 sec +101/160 Test #112: test_atom_1 ...................... Passed 0.09 sec Start 117: test_cansmi_1 -103/160 Test #114: test_atom_3 ...................... Passed 0.05 sec +102/160 Test #113: test_atom_2 ...................... Passed 0.09 sec Start 118: test_charge_mmff94_1 -104/160 Test #115: test_atom_4 ...................... Passed 0.03 sec +103/160 Test #114: test_atom_3 ...................... Passed 0.09 sec Start 119: test_charge_gasteiger_1 -105/160 Test #116: test_bond_1 ...................... Passed 0.06 sec +104/160 Test #115: test_atom_4 ...................... Passed 0.10 sec Start 120: test_conversion_1 -106/160 Test #111: test_aromatest_1 ................. Passed 0.16 sec +105/160 Test #116: test_bond_1 ...................... Passed 0.07 sec Start 121: test_datatest_1 -107/160 Test #121: test_datatest_1 .................. Passed 0.02 sec +106/160 Test #121: test_datatest_1 .................. Passed 0.03 sec Start 122: test_ffgaff_1 -108/160 Test #120: test_conversion_1 ................ Passed 0.21 sec +107/160 Test #111: test_aromatest_1 ................. Passed 0.22 sec Start 123: test_ffghemical_1 -109/160 Test #95: test_stereo_6 .................... Passed 0.90 sec +108/160 Test #120: test_conversion_1 ................ Passed 0.21 sec Start 124: test_ffmmff94_1 -110/160 Test #119: test_charge_gasteiger_1 .......... Passed 0.38 sec +109/160 Test #119: test_charge_gasteiger_1 .......... Passed 0.36 sec Start 125: test_ffmmff94_2 -111/160 Test #80: test_spectrophore_1 .............. Passed 1.50 sec +110/160 Test #95: test_stereo_6 .................... Passed 0.91 sec Start 126: test_ffuff_1 -112/160 Test #118: test_charge_mmff94_1 ............. Passed 0.75 sec +111/160 Test #80: test_spectrophore_1 .............. Passed 1.32 sec Start 127: test_formalcharge_1 -113/160 Test #72: test_shuffle_1 ................... Passed 2.14 sec +112/160 Test #72: test_shuffle_1 ................... Passed 1.65 sec Start 128: test_format_1 -114/160 Test #73: test_shuffle_2 ................... Passed 2.19 sec +113/160 Test #118: test_charge_mmff94_1 ............. Passed 0.85 sec Start 129: test_formula_1 -115/160 Test #128: test_format_1 .................... Passed 0.22 sec +114/160 Test #128: test_format_1 .................... Passed 0.26 sec Start 130: test_internalcoord_1 -116/160 Test #130: test_internalcoord_1 ............. Passed 0.03 sec +115/160 Test #130: test_internalcoord_1 ............. Passed 0.04 sec Start 131: test_invalidsmarts_1 -117/160 Test #131: test_invalidsmarts_1 ............. Passed 0.03 sec +116/160 Test #131: test_invalidsmarts_1 ............. Passed 0.07 sec Start 132: test_invalidsmiles_1 -118/160 Test #132: test_invalidsmiles_1 ............. Passed 0.03 sec +117/160 Test #132: test_invalidsmiles_1 ............. Passed 0.03 sec Start 133: test_iterators_1 -119/160 Test #127: test_formalcharge_1 .............. Passed 0.90 sec +118/160 Test #127: test_formalcharge_1 .............. Passed 0.75 sec Start 134: test_logp_psa_1 -120/160 Test #51: test_lssr_3 ...................... Passed 3.93 sec +119/160 Test #51: test_lssr_3 ...................... Passed 3.56 sec Start 135: test_math_1 -121/160 Test #134: test_logp_psa_1 .................. Passed 0.39 sec +120/160 Test #134: test_logp_psa_1 .................. Passed 0.32 sec Start 136: test_math_2 -122/160 Test #135: test_math_1 ...................... Passed 0.32 sec +121/160 Test #73: test_shuffle_2 ................... Passed 2.84 sec Start 137: test_math_3 -123/160 Test #129: test_formula_1 ................... Passed 1.13 sec +122/160 Test #135: test_math_1 ...................... Passed 0.32 sec Start 138: test_math_4 -124/160 Test #133: test_iterators_1 ................. Passed 0.93 sec +123/160 Test #129: test_formula_1 ................... Passed 1.02 sec Start 139: test_mol_1 -125/160 Test #137: test_math_3 ...................... Passed 0.06 sec +124/160 Test #133: test_iterators_1 ................. Passed 1.03 sec Start 140: test_phmodel_1 -126/160 Test #52: test_lssr_4 ...................... Passed 4.50 sec +125/160 Test #136: test_math_2 ...................... Passed 0.53 sec Start 141: test_residue_1 -127/160 Test #136: test_math_2 ...................... Passed 0.42 sec +126/160 Test #137: test_math_3 ...................... Passed 0.31 sec Start 142: test_ringtest_1 -128/160 Test #138: test_math_4 ...................... Passed 0.33 sec +127/160 Test #52: test_lssr_4 ...................... Passed 4.18 sec Start 143: test_smartstest_1 -129/160 Test #139: test_mol_1 ....................... Passed 0.34 sec +128/160 Test #138: test_math_4 ...................... Passed 0.31 sec Start 144: test_smartsparse_1 -130/160 Test #144: test_smartsparse_1 ............... Passed 0.06 sec +129/160 Test #144: test_smartsparse_1 ............... Passed 0.07 sec Start 145: test_smilesmatch_1 -131/160 Test #140: test_phmodel_1 ................... Passed 0.40 sec +130/160 Test #139: test_mol_1 ....................... Passed 0.36 sec Start 146: test_unitcell_1 -132/160 Test #146: test_unitcell_1 .................. Passed 0.04 sec +131/160 Test #146: test_unitcell_1 .................. Passed 0.04 sec Start 147: test_cmlreadfile_1 -133/160 Test #141: test_residue_1 ................... Passed 0.36 sec +132/160 Test #140: test_phmodel_1 ................... Passed 0.43 sec Start 148: inchiSamples.sdf_Test -134/160 Test #147: test_cmlreadfile_1 ............... Passed 0.31 sec +133/160 Test #141: test_residue_1 ................... Passed 0.38 sec Start 149: inchiSamplesTechMan.sdf_Test -135/160 Test #142: test_ringtest_1 .................. Passed 0.95 sec +134/160 Test #147: test_cmlreadfile_1 ............... Passed 0.30 sec Start 150: inchiSteffen_PubChem.smi_Test -136/160 Test #149: inchiSamplesTechMan.sdf_Test ..... Passed 0.62 sec +135/160 Test #142: test_ringtest_1 .................. Passed 0.87 sec Start 151: pytest_babel -137/160 Test #148: inchiSamples.sdf_Test ............ Passed 1.08 sec +136/160 Test #149: inchiSamplesTechMan.sdf_Test ..... Passed 0.60 sec Start 152: pytest_sym -138/160 Test #143: test_smartstest_1 ................ Passed 1.54 sec +137/160 Test #150: inchiSteffen_PubChem.smi_Test .... Passed 0.50 sec Start 153: pytest_smartssym -139/160 Test #150: inchiSteffen_PubChem.smi_Test .... Passed 0.60 sec +138/160 Test #148: inchiSamples.sdf_Test ............ Passed 1.01 sec Start 154: pytest_fastsearch -140/160 Test #151: pytest_babel ..................... Passed 0.61 sec +139/160 Test #151: pytest_babel ..................... Passed 0.46 sec Start 155: pytest_unique -141/160 Test #123: test_ffghemical_1 ................ Passed 4.12 sec +140/160 Test #143: test_smartstest_1 ................ Passed 1.43 sec Start 156: pytest_kekule -142/160 Test #126: test_ffuff_1 ..................... Passed 4.16 sec +141/160 Test #123: test_ffghemical_1 ................ Passed 4.00 sec Start 157: pytest_pdbformat -143/160 Test #122: test_ffgaff_1 .................... Passed 4.89 sec +142/160 Test #122: test_ffgaff_1 .................... Passed 4.40 sec Start 158: pybindtest_bindings -144/160 Test #154: pytest_fastsearch ................ Passed 1.26 sec +143/160 Test #154: pytest_fastsearch ................ Passed 1.27 sec Start 159: pybindtest__pybel -145/160 Test #157: pytest_pdbformat ................. Passed 0.61 sec +144/160 Test #126: test_ffuff_1 ..................... Passed 4.42 sec Start 160: pybindtest_example -146/160 Test #117: test_cansmi_1 .................... Passed 5.57 sec -147/160 Test #158: pybindtest_bindings .............. Passed 1.49 sec -148/160 Test #160: pybindtest_example ............... Passed 1.42 sec -149/160 Test #155: pytest_unique .................... Passed 3.52 sec -150/160 Test #145: test_smilesmatch_1 ............... Passed 5.85 sec -151/160 Test #156: pytest_kekule .................... Passed 7.14 sec -152/160 Test #50: test_lssr_2 ...................... Passed 18.28 sec -153/160 Test #153: pytest_smartssym ................. Passed 12.44 sec -154/160 Test #24: test_canonstable_1 ............... Passed 78.42 sec -155/160 Test #125: test_ffmmff94_2 .................. Passed 588.64 sec -156/160 Test #16: test_builder_1 ...................***Timeout 1500.23 sec +145/160 Test #157: pytest_pdbformat ................. Passed 0.74 sec +146/160 Test #117: test_cansmi_1 .................... Passed 5.60 sec +147/160 Test #158: pybindtest_bindings .............. Passed 1.57 sec +148/160 Test #160: pybindtest_example ............... Passed 1.39 sec +149/160 Test #155: pytest_unique .................... Passed 3.50 sec +150/160 Test #145: test_smilesmatch_1 ............... Passed 5.54 sec +151/160 Test #156: pytest_kekule .................... Passed 7.35 sec +152/160 Test #50: test_lssr_2 ...................... Passed 16.05 sec +153/160 Test #153: pytest_smartssym ................. Passed 14.21 sec +154/160 Test #24: test_canonstable_1 ............... Passed 69.32 sec +155/160 Test #125: test_ffmmff94_2 .................. Passed 625.03 sec +156/160 Test #16: test_builder_1 ...................***Timeout 1500.12 sec Starting forcefield.sdf /Volumes/Home/ghutchis/Desktop/UFF/CCCN.gpr /Volumes/Home/ghutchis/Desktop/UFF/CH3CONH2.gpr -/Volumes/Home/ghutchis/Desktop/UFF/COOCH3.gpr -157/160 Test #17: test_builder_2 ...................***Timeout 1500.23 sec +157/160 Test #17: test_builder_2 ...................***Timeout 1500.12 sec Starting filterset.sdf 56 137 135 -134 -158/160 Test #124: test_ffmmff94_1 ..................***Timeout 1500.07 sec +158/160 Test #124: test_ffmmff94_1 ..................***Timeout 1500.06 sec # Testing MMFF94 Force Field... ok 1 # energy ---------------------------------------------------------------------------------------- @@ -5187,7 +5220,7 @@ angle ( 2.902, 2.092, -7.874) ( 2.904, 2.094, -7.872) ( 0.05, 0.09, 0.03) strbnd ( -1.490, -4.290, 5.538) ( -1.491, -4.290, 5.537) ( 0.03, 0.02, 0.02) torsion ( 1.310, 0.148, 0.500) ( 1.310, 0.148, 0.500) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.133, 6.426, -2.475) ( -1.133, 6.427, -2.475) ( 0.00, 0.00, 0.00) electro ( 0.161, -0.154, -0.314) ( 0.161, -0.154, -0.314) ( 0.00, 0.00, 0.00) 10 ( 0.385, -1.062, -0.159) ( 0.412, -1.037, -0.241) ( 1.03, 2.28, 1.31) @@ -5291,7 +5324,7 @@ angle ( -1.279, 0.117, 4.947) ( -1.278, 0.117, 4.948) ( 0.03, 0.00, 0.01) strbnd ( -1.175, -1.676, -0.163) ( -1.175, -1.676, -0.163) ( 0.00, 0.01, 0.00) torsion ( -0.017, 0.448, -2.440) ( -0.017, 0.448, -2.440) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.912, 10.758, -1.469) ( -5.912, 10.758, -1.469) ( 0.00, 0.00, 0.00) electro ( 9.975, -0.305, -0.094) ( 9.975, -0.305, -0.094) ( 0.00, 0.00, 0.00) 23 ( 1.091, -0.357, -0.060) ( 1.092, -0.357, -0.050) ( 0.01, 0.00, 0.06) @@ -5307,7 +5340,7 @@ angle ( 0.284, -0.374, -2.715) ( 0.285, -0.374, -2.714) ( 0.02, 0.00, 0.02) strbnd ( -0.744, -0.761, 0.185) ( -0.744, -0.761, 0.185) ( 0.00, 0.00, 0.00) torsion ( -0.625, 0.065, -0.401) ( -0.625, 0.065, -0.401) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.476, -1.332, 4.015) ( -0.476, -1.332, 4.015) ( 0.01, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 25 ( -0.216, 0.307, 0.417) ( -0.215, 0.308, 0.419) ( 0.03, 0.03, 0.10) @@ -5315,7 +5348,7 @@ angle ( -1.034, 6.306, -1.664) ( -1.034, 6.306, -1.664) ( 0.04, 0.01, 0.01) strbnd ( -0.562, 0.219, 0.095) ( -0.562, 0.219, 0.095) ( 0.00, 0.00, 0.00) torsion ( -0.037, -1.134, 0.433) ( -0.037, -1.134, 0.433) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.429, -5.077, 1.574) ( 1.429, -5.077, 1.574) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.284, -0.046, -0.073) ( -0.283, -0.045, -0.071) ( 0.02, 0.01, 0.02) @@ -5323,7 +5356,7 @@ angle ( -0.745, -7.579, 4.614) ( -0.744, -7.579, 4.614) ( 0.03, 0.01, 0.00) strbnd ( -0.133, -0.439, 0.449) ( -0.133, -0.439, 0.449) ( 0.00, 0.00, 0.00) torsion ( -0.063, 0.000, -0.019) ( -0.063, 0.000, -0.019) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.284, 6.636, -7.210) ( 1.284, 6.636, -7.210) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 27 ( -0.055, 0.024, 0.090) ( -0.053, 0.026, 0.091) ( 0.01, 0.00, 0.01) @@ -5333,15 +5366,15 @@ torsion ( 0.024, 0.049, 0.043) ( 0.024, 0.049, 0.043) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.136, 0.552, -0.214) ( -0.136, 0.552, -0.214) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( 0.017, -0.066, -0.165) ( 0.019, -0.065, -0.164) ( 0.00, 0.01, 0.01) bond ( -0.618, -0.478, -0.203) ( -0.616, -0.477, -0.203) ( 0.12, 0.06, 0.00) angle ( 0.508, -0.622, -0.082) ( 0.508, -0.622, -0.081) ( 0.01, 0.02, 0.00) strbnd ( 0.062, -0.250, 0.582) ( 0.062, -0.250, 0.582) ( 0.00, 0.00, 0.00) torsion ( 0.032, -0.035, -0.016) ( 0.032, -0.035, -0.016) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.032, 1.319, -0.446) ( 0.032, 1.319, -0.446) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 29 ( -0.042, 0.017, 0.205) ( -0.040, 0.019, 0.206) ( 0.01, 0.00, 0.03) bond ( 0.190, -0.138, 0.157) ( 0.192, -0.137, 0.158) ( 0.03, 0.01, 0.02) angle ( -1.278, -5.641, -3.328) ( -1.277, -5.640, -3.328) ( 0.02, 0.01, 0.01) @@ -5349,23 +5382,23 @@ torsion ( -0.378, 0.160, 0.596) ( -0.378, 0.160, 0.596) ( 0.00, 0.00, 0.00) oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.482, 6.333, 2.621) ( 1.482, 6.333, 2.621) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 30 ( 0.055, -0.028, 0.141) ( 0.056, -0.027, 0.144) ( 0.01, 0.00, 0.03) bond ( -0.443, -0.386, 0.756) ( -0.442, -0.386, 0.759) ( 0.03, 0.02, 0.16) angle ( -0.262, -0.474, -0.393) ( -0.261, -0.474, -0.393) ( 0.01, 0.02, 0.01) strbnd ( -0.413, -0.294, -0.338) ( -0.413, -0.294, -0.338) ( 0.00, 0.00, 0.00) torsion ( 0.017, -0.020, -0.001) ( 0.017, -0.020, -0.001) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.156, 1.146, 0.117) ( 1.156, 1.146, 0.117) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 31 ( -0.052, 0.041, 0.085) ( -0.051, 0.043, 0.086) ( 0.01, 0.01, 0.01) bond ( 0.468, -0.992, -0.774) ( 0.469, -0.990, -0.773) ( 0.02, 0.18, 0.09) angle ( -4.788, 0.065, -2.987) ( -4.788, 0.065, -2.987) ( 0.01, 0.00, 0.01) strbnd ( -0.780, 0.245, 0.269) ( -0.780, 0.245, 0.269) ( 0.00, 0.00, 0.00) torsion ( 0.095, -0.413, 0.587) ( 0.095, -0.413, 0.587) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.954, 1.137, 2.990) ( 4.954, 1.137, 2.990) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 32 ( 0.029, -0.014, -0.100) ( 0.031, -0.012, -0.100) ( 0.01, 0.00, 0.01) bond ( 0.990, 1.125, 0.207) ( 0.992, 1.126, 0.207) ( 0.14, 0.17, 0.00) angle ( 3.214, -2.731, -0.541) ( 3.214, -2.730, -0.540) ( 0.01, 0.01, 0.02) @@ -5379,17 +5412,17 @@ angle ( 2.741, 1.372, 0.138) ( 2.741, 1.373, 0.138) ( 0.02, 0.03, 0.00) strbnd ( 0.276, -0.000, 0.286) ( 0.276, -0.000, 0.286) ( 0.00, 0.00, 0.00) torsion ( -0.286, -0.647, 0.304) ( -0.286, -0.647, 0.304) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.131, -0.007, 0.292) ( -3.131, -0.007, 0.292) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 34 ( 0.075, -0.007, -0.103) ( 0.076, -0.006, -0.101) ( 0.00, 0.00, 0.02) bond ( 0.035, -0.551, 0.735) ( 0.035, -0.550, 0.737) ( 0.00, 0.07, 0.16) angle ( 1.556, 0.759, 0.492) ( 1.556, 0.759, 0.493) ( 0.03, 0.02, 0.01) strbnd ( 0.359, -0.089, -0.017) ( 0.359, -0.089, -0.017) ( 0.00, 0.00, 0.00) torsion ( -0.120, -0.433, -0.317) ( -0.120, -0.433, -0.317) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.755, 0.308, -0.996) ( -1.755, 0.308, -0.996) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 35 ( 1.750, -1.226, 0.260) ( 1.752, -1.223, 0.261) ( 0.10, 0.24, 0.04) bond ( 0.213, 0.288, -0.021) ( 0.214, 0.290, -0.021) ( 0.03, 0.07, 0.00) angle ( 0.833, -0.601, 0.186) ( 0.834, -0.601, 0.186) ( 0.04, 0.01, 0.00) @@ -5490,7 +5523,7 @@ 7 ( -0.447, -0.202, -0.130) ( -0.443, -0.195, -0.129) ( 0.18, 0.16, 0.01) bond ( 0.245, 0.341, 0.076) ( 0.249, 0.348, 0.077) ( 0.10, 0.26, 0.00) angle ( -0.389, 0.299, -0.100) ( -0.389, 0.299, -0.099) ( 0.01, 0.00, 0.00) - strbnd ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + strbnd ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.646, 0.581, 0.189) ( 0.646, 0.581, 0.189) ( 0.00, 0.00, 0.00) @@ -5519,7 +5552,7 @@ torsion ( -0.008, -0.021, -0.086) ( -0.008, -0.021, -0.086) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.026, 0.015) ( 0.000, 0.022, 0.012) ( 0.00, 0.01, 0.00) vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( -0.084, -0.011, 0.022) ( -0.082, -0.014, 0.025) ( 0.02, 0.00, 0.01) bond ( -1.795, -1.762, 3.022) ( -1.793, -1.760, 3.028) ( 0.11, 0.11, 0.18) angle ( -8.883, 2.272, -3.938) ( -8.882, 2.272, -3.938) ( 0.01, 0.00, 0.00) @@ -5557,7 +5590,7 @@ angle ( 1.553, -0.437, 0.860) ( 1.553, -0.437, 0.860) ( 0.03, 0.00, 0.04) strbnd ( 0.368, 0.645, -0.047) ( 0.368, 0.645, -0.047) ( 0.00, 0.00, 0.00) torsion ( -0.015, 0.001, -0.149) ( -0.015, 0.001, -0.149) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.977, -0.460, -0.633) ( -1.977, -0.460, -0.633) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( -0.053, 0.067, 0.183) ( -0.052, 0.068, 0.186) ( 0.00, 0.01, 0.05) @@ -5573,9 +5606,9 @@ angle ( 1.546, 0.380, -0.664) ( 1.547, 0.380, -0.664) ( 0.03, 0.01, 0.01) strbnd ( 0.317, -0.116, 0.199) ( 0.317, -0.116, 0.199) ( 0.00, 0.00, 0.00) torsion ( -0.000, 0.006, 0.003) ( -0.000, 0.006, 0.003) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.052, -0.097, 0.162) ( -2.052, -0.097, 0.162) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 6 # gradients ok 7 # energy ---------------------------------------------------------------------------------------- @@ -5590,7 +5623,7 @@ angle ( 1.859, -4.639, 2.751) ( 1.861, -4.637, 2.752) ( 0.10, 0.04, 0.06) strbnd ( 0.352, -0.450, 0.642) ( 0.351, -0.450, 0.641) ( 0.05, 0.03, 0.04) torsion ( -0.296, -0.439, 0.009) ( -0.296, -0.439, 0.009) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.689, 2.322, 0.608) ( 5.689, 2.322, 0.608) ( 0.00, 0.00, 0.00) electro ( -2.279, 0.731, -1.001) ( -2.279, 0.731, -1.001) ( 0.00, 0.00, 0.00) 2 ( -0.776, -0.622, -0.218) ( -0.780, -0.606, -0.189) ( 0.23, 0.97, 0.62) @@ -5606,7 +5639,7 @@ angle ( -5.704, 0.511, -1.299) ( -5.703, 0.511, -1.299) ( 0.01, 0.00, 0.04) strbnd ( -0.435, 0.449, -0.226) ( -0.435, 0.449, -0.226) ( 0.00, 0.00, 0.00) torsion ( -0.156, -0.037, 0.231) ( -0.156, -0.037, 0.231) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 6.326, -2.115, 0.844) ( 6.326, -2.115, 0.844) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 4 ( -0.154, -0.035, 0.283) ( -0.151, -0.034, 0.284) ( 0.04, 0.00, 0.03) @@ -5694,7 +5727,7 @@ bond ( -9.351, 26.406, -0.000) ( -9.351, 26.409, 0.000) ( 0.00, 0.01, 0.00) angle ( 1.760, 0.623, -0.007) ( 1.760, 0.623, -0.006) ( 0.03, 0.00, 0.00) strbnd ( -1.908, -0.349, 0.000) ( -1.908, -0.349, 0.000) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, 0.152) ( 0.000, 0.000, 0.152) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.000, 0.152) ( 0.000, 0.000, 0.152) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.187, 1.385, -0.040) ( 7.187, 1.385, -0.040) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -5718,7 +5751,7 @@ bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) angle ( -0.000, -1.856, -0.010) ( 0.000, -1.856, -0.009) ( 0.00, 0.03, 0.00) strbnd ( 0.304, 1.915, -0.000) ( 0.304, 1.915, -0.000) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.469) ( 0.000, 0.000, -0.469) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.762, -1.899, -1.090) ( -0.762, -1.899, -1.090) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -5777,13 +5810,13 @@ strbnd ( 20.845, -29.505, 51.044) ( 20.845, -29.506, 51.044) ( 0.00, 0.00, 0.00) torsion ( -0.002, -0.001, -0.002) ( -0.002, -0.001, -0.002) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + vdw ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 2 (267.229, 1.097, -1.985) (267.239, 1.101, -1.981) ( 0.00, 0.37, 0.20) bond (324.092, 0.002, 0.003) (324.102, 0.005, 0.006) ( 0.00, 0.00, 0.00) angle ( -7.067, -9.049, 15.613) ( -7.066, -9.047, 15.614) ( 0.02, 0.02, 0.01) strbnd (-54.347, 8.796, -15.254) (-54.349, 8.796, -15.255) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.001, -0.000) ( 0.000, 0.001, -0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, 0.001, -0.000) ( 0.000, 0.001, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.551, 1.346, -2.346) ( 4.551, 1.346, -2.346) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -5829,9 +5862,9 @@ electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 8 ( 27.412, -19.113, -1.101) ( 27.414, -19.112, -1.100) ( 0.01, 0.00, 0.05) bond ( 28.025, -0.000, -0.000) ( 28.028, 0.000, 0.000) ( 0.01, 0.00, 0.00) - angle ( 0.000, -2.447, -0.010) ( 0.000, -2.447, -0.009) ( 0.00, 0.02, 0.00) + angle ( -0.000, -2.447, -0.010) ( 0.000, -2.447, -0.009) ( 0.00, 0.02, 0.00) strbnd ( 0.148, -14.767, -0.000) ( 0.148, -14.767, -0.000) ( 0.00, 0.00, 0.00) - torsion ( 0.000, 0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, -0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.762, -1.899, -1.090) ( -0.762, -1.899, -1.090) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -6065,9 +6098,9 @@ angle ( 12.507, 0.572, 0.600) ( 12.509, 0.573, 0.602) ( 0.02, 0.10, 0.10) strbnd ( 0.608, -3.802, 1.723) ( 0.607, -3.803, 1.722) ( 0.05, 0.02, 0.03) torsion ( -1.338, 1.223, -0.733) ( -1.338, 1.223, -0.733) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.970, 7.085, -4.139) ( -1.970, 7.085, -4.139) ( 0.01, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 0.006, -0.005, 0.058) ( 0.012, 0.000, 0.060) ( 0.00, 0.00, 0.02) bond ( -0.866, -18.509, 3.882) ( -0.862, -18.505, 3.887) ( 0.40, 0.02, 0.12) angle ( 5.959, 26.024, -8.109) ( 5.962, 26.026, -8.108) ( 0.04, 0.01, 0.02) @@ -6081,7 +6114,7 @@ angle ( -5.572, -18.333, 5.423) ( -5.570, -18.330, 5.425) ( 0.04, 0.01, 0.03) strbnd ( -1.114, -2.631, -0.165) ( -1.115, -2.631, -0.166) ( 0.10, 0.02, 0.00) torsion ( 3.318, -0.490, -3.647) ( 3.318, -0.490, -3.647) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 7.225, 9.078, -0.852) ( 7.225, 9.078, -0.852) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( -0.228, 0.018, 0.143) ( -0.223, 0.024, 0.149) ( 0.11, 0.01, 0.08) @@ -6089,7 +6122,7 @@ angle ( -8.266, 12.873, -7.689) ( -8.264, 12.875, -7.687) ( 0.02, 0.02, 0.03) strbnd ( 1.193, 5.294, 4.137) ( 1.192, 5.293, 4.136) ( 0.07, 0.01, 0.03) torsion ( -0.164, -0.701, 3.652) ( -0.164, -0.701, 3.652) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.542, -1.377, 0.272) ( -0.542, -1.377, 0.272) ( 0.01, 0.00, 0.00) electro ( 3.125, -0.209, 0.725) ( 3.125, -0.209, 0.725) ( 0.00, 0.00, 0.00) 27 ( -0.131, 0.200, 0.315) ( -0.126, 0.205, 0.322) ( 0.06, 0.11, 0.19) @@ -6097,15 +6130,15 @@ angle ( -2.830, -11.271, 1.923) ( -2.828, -11.269, 1.924) ( 0.07, 0.02, 0.10) strbnd ( 1.105, -0.095, 0.631) ( 1.104, -0.095, 0.630) ( 0.10, 0.01, 0.02) torsion ( 1.263, -4.544, -4.977) ( 1.263, -4.544, -4.977) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.574, 1.387, 1.663) ( 1.574, 1.387, 1.663) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 28 ( -0.164, 0.308, 0.056) ( -0.159, 0.314, 0.060) ( 0.08, 0.19, 0.03) bond ( -2.953, -11.140, 2.764) ( -2.949, -11.136, 2.768) ( 0.12, 0.04, 0.15) angle ( -6.707, 11.635, 3.591) ( -6.705, 11.637, 3.594) ( 0.03, 0.02, 0.06) strbnd ( 1.933, -1.383, -4.721) ( 1.932, -1.383, -4.722) ( 0.05, 0.02, 0.03) torsion ( -0.767, 1.045, 0.680) ( -0.767, 1.045, 0.680) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.685, -1.579, 0.134) ( -1.684, -1.579, 0.134) ( 0.01, 0.00, 0.00) electro ( 10.015, 1.730, -2.393) ( 10.015, 1.730, -2.393) ( 0.00, 0.00, 0.00) 29 ( -0.089, 0.132, -0.028) ( -0.179, 0.268, 0.043) ( 0.80, 1.80, 0.20) @@ -6145,7 +6178,7 @@ angle ( 8.749, -2.680, 5.549) ( 8.750, -2.680, 5.550) ( 0.01, 0.01, 0.02) strbnd ( 0.282, -2.395, -3.567) ( 0.282, -2.395, -3.567) ( 0.00, 0.00, 0.01) torsion ( -0.756, 0.926, -0.619) ( -0.756, 0.926, -0.619) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.059, 4.362, 2.702) ( 2.059, 4.362, 2.702) ( 0.01, 0.00, 0.00) electro (-11.239, 1.825, -2.594) (-11.239, 1.825, -2.594) ( 0.00, 0.00, 0.00) 34 ( 0.039, 0.551, 0.057) ( 0.045, 0.552, 0.061) ( 0.02, 0.04, 0.02) @@ -6153,7 +6186,7 @@ angle ( 3.434, -0.862, -3.531) ( 3.435, -0.861, -3.530) ( 0.02, 0.04, 0.03) strbnd ( -0.868, -0.657, 2.046) ( -0.868, -0.658, 2.046) ( 0.01, 0.00, 0.02) torsion ( -0.397, 0.278, 0.129) ( -0.397, 0.278, 0.129) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.894, 2.781, 6.709) ( -1.894, 2.781, 6.709) ( 0.01, 0.00, 0.00) electro (-13.976, -4.035, 5.969) (-13.976, -4.035, 5.969) ( 0.00, 0.00, 0.00) 35 ( 0.215, -0.454, -0.523) ( 0.219, -0.455, -0.518) ( 0.09, 0.03, 0.24) @@ -6259,55 +6292,55 @@ torsion ( 0.081, 1.012, -0.193) ( 0.081, 1.012, -0.193) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.317, 0.020, -1.836) ( -0.317, 0.020, -1.835) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 48 ( 0.158, 0.208, 0.381) ( 0.161, 0.209, 0.382) ( 0.05, 0.03, 0.02) bond ( -1.345, -0.662, -0.174) ( -1.342, -0.661, -0.174) ( 0.21, 0.04, 0.00) angle ( 2.482, -5.347, 1.171) ( 2.482, -5.347, 1.171) ( 0.00, 0.01, 0.04) strbnd ( -0.569, -0.838, -0.623) ( -0.569, -0.838, -0.623) ( 0.00, 0.00, 0.00) torsion ( 0.479, -1.375, 1.531) ( 0.479, -1.375, 1.531) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.889, 8.429, -1.524) ( -0.889, 8.429, -1.524) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 49 ( 0.370, -0.684, 0.437) ( 0.371, -0.684, 0.441) ( 0.03, 0.03, 0.14) bond ( -0.186, 0.025, -0.685) ( -0.186, 0.025, -0.682) ( 0.00, 0.00, 0.22) angle ( 1.336, -2.129, -0.442) ( 1.336, -2.128, -0.442) ( 0.04, 0.02, 0.00) strbnd ( 0.611, -0.262, -0.310) ( 0.611, -0.262, -0.310) ( 0.00, 0.00, 0.00) torsion ( -0.104, -0.201, 0.021) ( -0.104, -0.201, 0.021) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.287, 1.882, 1.854) ( -1.287, 1.882, 1.854) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 50 ( 0.588, 0.088, 1.012) ( 0.589, 0.092, 1.013) ( 0.04, 0.03, 0.07) bond ( 0.403, -2.471, 0.627) ( 0.403, -2.468, 0.627) ( 0.00, 0.12, 0.01) angle ( 5.516, 0.699, -0.794) ( 5.517, 0.699, -0.793) ( 0.01, 0.00, 0.04) strbnd ( 0.314, 1.208, -0.817) ( 0.314, 1.208, -0.817) ( 0.00, 0.00, 0.00) torsion ( -0.531, -0.207, -0.474) ( -0.531, -0.207, -0.474) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.114, 0.860, 2.470) ( -5.114, 0.860, 2.470) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 51 ( -0.316, -0.193, -0.505) ( -0.315, -0.192, -0.503) ( 0.06, 0.02, 0.10) bond ( 0.716, -0.298, -0.826) ( 0.717, -0.297, -0.824) ( 0.10, 0.01, 0.15) angle ( 1.189, -5.329, 2.958) ( 1.189, -5.328, 2.959) ( 0.03, 0.01, 0.01) strbnd ( -0.047, -0.589, -0.422) ( -0.047, -0.589, -0.422) ( 0.00, 0.00, 0.00) torsion ( 0.936, -0.735, 1.080) ( 0.936, -0.735, 1.080) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.110, 6.758, -3.296) ( -3.110, 6.758, -3.296) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 52 ( -0.101, -0.092, -0.176) ( -0.100, -0.090, -0.175) ( 0.01, 0.02, 0.01) bond ( 1.134, -2.431, 0.852) ( 1.134, -2.428, 0.852) ( 0.05, 0.10, 0.03) angle ( -3.696, -1.139, 1.674) ( -3.696, -1.138, 1.675) ( 0.01, 0.01, 0.03) strbnd ( -1.209, 1.211, -0.450) ( -1.209, 1.211, -0.450) ( 0.00, 0.00, 0.00) torsion ( -0.018, 0.060, 0.194) ( -0.018, 0.060, 0.194) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 3.689, 2.206, -2.447) ( 3.689, 2.206, -2.447) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 53 ( 0.304, -0.091, -0.474) ( 0.305, -0.090, -0.471) ( 0.04, 0.01, 0.12) bond ( -0.341, -0.134, -0.569) ( -0.341, -0.134, -0.567) ( 0.03, 0.00, 0.14) angle ( 0.912, -4.148, 0.434) ( 0.913, -4.147, 0.434) ( 0.03, 0.01, 0.01) strbnd ( -0.362, -0.327, 0.331) ( -0.362, -0.327, 0.331) ( 0.00, 0.00, 0.00) torsion ( 0.427, -0.471, -0.145) ( 0.427, -0.471, -0.145) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.333, 4.990, -0.524) ( -0.333, 4.990, -0.524) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 54 ( 0.047, 0.327, 0.213) ( 0.048, 0.328, 0.216) ( 0.00, 0.04, 0.06) bond ( 0.044, 0.448, -1.022) ( 0.044, 0.449, -1.019) ( 0.00, 0.02, 0.28) angle ( -5.073, 4.709, 1.855) ( -5.072, 4.710, 1.855) ( 0.01, 0.01, 0.00) @@ -6315,15 +6348,15 @@ torsion ( 0.301, 0.513, 0.239) ( 0.301, 0.513, 0.239) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.463, -4.236, -0.352) ( 5.463, -4.236, -0.352) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 55 ( -0.139, -0.301, 0.325) ( -0.139, -0.299, 0.327) ( 0.01, 0.06, 0.06) bond ( 0.004, -0.058, -0.057) ( 0.004, -0.056, -0.056) ( 0.00, 0.01, 0.01) angle ( -0.993, 1.847, -1.929) ( -0.992, 1.847, -1.929) ( 0.07, 0.01, 0.01) strbnd ( -0.720, -1.271, 0.377) ( -0.720, -1.271, 0.377) ( 0.00, 0.00, 0.00) torsion ( 0.101, 0.125, -0.120) ( 0.101, 0.125, -0.120) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.469, -0.945, 2.055) ( 1.469, -0.944, 2.055) ( 0.01, 0.01, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 56 ( -0.037, -0.300, -0.241) ( -0.036, -0.299, -0.238) ( 0.00, 0.04, 0.06) bond ( 0.176, 1.777, -3.219) ( 0.177, 1.777, -3.216) ( 0.00, 0.04, 0.08) angle ( -1.373, -1.962, -1.160) ( -1.373, -1.962, -1.159) ( 0.05, 0.02, 0.01) @@ -6331,31 +6364,31 @@ torsion ( -1.378, 0.531, 0.218) ( -1.378, 0.532, 0.218) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.841, -0.714, 2.749) ( 2.842, -0.714, 2.749) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 57 ( 0.041, 0.148, -0.296) ( 0.041, 0.150, -0.294) ( 0.00, 0.03, 0.06) bond ( -0.135, 2.007, 2.146) ( -0.135, 2.009, 2.147) ( 0.00, 0.08, 0.08) angle ( 0.451, -0.692, 0.675) ( 0.452, -0.692, 0.675) ( 0.03, 0.02, 0.02) strbnd ( -0.177, -0.030, -0.939) ( -0.177, -0.030, -0.939) ( 0.00, 0.00, 0.00) torsion ( -1.075, -0.300, 0.213) ( -1.075, -0.300, 0.213) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.976, -0.838, -2.392) ( 0.976, -0.838, -2.392) ( 0.02, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 58 ( -0.254, 0.017, -0.064) ( -0.254, 0.019, -0.062) ( 0.02, 0.00, 0.02) bond ( -0.040, -1.500, 1.928) ( -0.040, -1.499, 1.930) ( 0.00, 0.08, 0.11) angle ( -1.136, 1.312, 0.995) ( -1.135, 1.312, 0.995) ( 0.05, 0.03, 0.02) strbnd ( 0.280, -0.457, -0.574) ( 0.280, -0.457, -0.574) ( 0.00, 0.00, 0.00) torsion ( 0.158, 0.214, 0.170) ( 0.158, 0.214, 0.170) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.484, 0.449, -2.583) ( 0.484, 0.449, -2.583) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 59 ( -0.039, 0.371, 0.524) ( -0.039, 0.373, 0.526) ( 0.00, 0.07, 0.11) bond ( 0.250, 2.246, -2.453) ( 0.250, 2.247, -2.451) ( 0.00, 0.07, 0.07) angle ( -0.227, 0.092, 0.062) ( -0.226, 0.092, 0.062) ( 0.01, 0.00, 0.00) strbnd ( -0.193, -0.135, 1.231) ( -0.193, -0.135, 1.231) ( 0.00, 0.00, 0.00) torsion ( 0.564, 2.085, 1.969) ( 0.564, 2.085, 1.969) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.433, -3.917, -0.285) ( -0.433, -3.917, -0.285) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 60 ( -0.063, -0.072, 0.504) ( -0.062, -0.071, 0.506) ( 0.01, 0.01, 0.13) bond ( 0.260, 1.745, 3.031) ( 0.260, 1.746, 3.033) ( 0.00, 0.05, 0.08) angle ( 3.751, -1.603, 0.601) ( 3.752, -1.603, 0.601) ( 0.02, 0.02, 0.01) @@ -6363,13 +6396,13 @@ torsion ( -1.382, 1.853, -0.948) ( -1.382, 1.853, -0.948) ( 0.00, 0.00, 0.00) oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.493, -2.052, -0.640) ( -2.493, -2.052, -0.640) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 61 ( -0.281, 0.189, -0.034) ( -0.280, 0.192, -0.033) ( 0.02, 0.06, 0.00) bond ( 0.133, -2.004, 0.580) ( 0.133, -2.001, 0.581) ( 0.00, 0.15, 0.02) angle ( 0.076, -0.444, -1.547) ( 0.077, -0.444, -1.546) ( 0.00, 0.00, 0.04) strbnd ( -0.121, -0.013, 0.295) ( -0.121, -0.013, 0.295) ( 0.00, 0.00, 0.00) torsion ( 0.940, 0.033, -0.103) ( 0.940, 0.033, -0.103) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.309, 2.616, 0.740) ( -1.309, 2.616, 0.740) ( 0.01, 0.00, 0.00) electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 62 ( -0.037, 0.359, 0.037) ( -0.037, 0.362, 0.038) ( 0.00, 0.10, 0.00) @@ -6377,17 +6410,17 @@ angle ( -0.273, 0.763, 1.769) ( -0.273, 0.763, 1.769) ( 0.01, 0.01, 0.02) strbnd ( -0.325, 0.488, 0.279) ( -0.325, 0.488, 0.279) ( 0.00, 0.00, 0.00) torsion ( 1.294, 0.792, 0.827) ( 1.294, 0.792, 0.827) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.153, -3.573, -1.933) ( -0.153, -3.573, -1.933) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 63 ( -0.297, 0.195, 0.097) ( -0.296, 0.196, 0.100) ( 0.03, 0.01, 0.03) bond ( 0.610, 0.315, 1.633) ( 0.610, 0.315, 1.636) ( 0.02, 0.00, 0.18) angle ( -1.418, 1.386, 0.261) ( -1.418, 1.387, 0.261) ( 0.03, 0.03, 0.00) strbnd ( -0.282, 0.382, 0.365) ( -0.282, 0.382, 0.365) ( 0.00, 0.00, 0.00) torsion ( 0.426, 0.990, -0.350) ( 0.426, 0.990, -0.350) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.367, -2.878, -1.812) ( 0.367, -2.878, -1.812) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 64 ( 5.704, -0.249, 0.138) ( 5.704, -0.244, 0.139) ( 0.00, 0.13, 0.01) bond ( 0.052, 0.524, -0.141) ( 0.052, 0.529, -0.141) ( 0.00, 0.27, 0.01) angle ( 0.150, -0.836, -3.088) ( 0.150, -0.836, -3.088) ( 0.00, 0.00, 0.02) @@ -6401,7 +6434,7 @@ angle ( 0.082, -0.169, 2.424) ( 0.082, -0.169, 2.425) ( 0.00, 0.00, 0.02) strbnd ( 0.390, 0.135, -0.958) ( 0.390, 0.135, -0.958) ( 0.00, 0.00, 0.00) torsion ( -0.084, 0.524, 0.039) ( -0.084, 0.524, 0.039) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.216, 1.133, 7.265) ( -1.216, 1.133, 7.265) ( 0.00, 0.00, 0.00) electro ( 17.799, 1.709, -9.304) ( 17.799, 1.709, -9.304) ( 0.00, 0.00, 0.00) ok 14 # gradients @@ -6561,39 +6594,39 @@ bond ( 6.549, -6.489, -5.236) ( 6.550, -6.488, -5.235) ( 0.02, 0.02, 0.02) angle (-15.891, -11.333, -5.837) (-15.890, -11.333, -5.837) ( 0.00, 0.00, 0.01) strbnd ( -1.046, 0.503, 0.436) ( -1.046, 0.503, 0.436) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.839, 1.264, 1.139) ( 0.839, 1.264, 1.139) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( -6.872, -6.628, -8.449) ( -6.870, -6.627, -8.448) ( 0.02, 0.01, 0.02) bond ( -7.287, 3.445, -8.054) ( -7.286, 3.445, -8.052) ( 0.02, 0.01, 0.02) angle ( -1.156, -10.327, -3.372) ( -1.156, -10.326, -3.372) ( 0.02, 0.01, 0.01) strbnd ( 1.415, -1.060, 1.430) ( 1.415, -1.060, 1.430) ( 0.00, 0.00, 0.00) - torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.156, 1.313, 1.547) ( 0.156, 1.313, 1.547) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( -5.154, -11.419, -3.897) ( -5.153, -11.418, -3.895) ( 0.02, 0.01, 0.04) bond ( -5.951, -7.142, 6.246) ( -5.950, -7.141, 6.247) ( 0.02, 0.02, 0.02) angle ( -0.744, -6.990, -8.698) ( -0.743, -6.990, -8.698) ( 0.02, 0.00, 0.01) strbnd ( 1.377, 1.441, -1.809) ( 1.377, 1.441, -1.809) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.163, 1.273, 0.365) ( 0.163, 1.273, 0.365) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( 6.707, 14.950, -4.095) ( 6.709, 14.951, -4.094) ( 0.04, 0.00, 0.03) bond ( 10.180, 0.038, -5.182) ( 10.183, 0.038, -5.181) ( 0.02, 0.00, 0.01) angle ( -0.643, 16.864, -1.139) ( -0.642, 16.864, -1.139) ( 0.01, 0.00, 0.03) strbnd ( -2.565, 0.430, 1.327) ( -2.565, 0.430, 1.327) ( 0.00, 0.00, 0.00) torsion ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.266, -2.382, 0.899) ( -0.266, -2.382, 0.899) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( 7.712, 7.044, 4.929) ( 7.712, 7.045, 4.931) ( 0.01, 0.01, 0.05) bond ( 2.115, 4.636, 9.930) ( 2.115, 4.637, 9.932) ( 0.01, 0.01, 0.02) angle ( 6.274, 3.725, -3.075) ( 6.274, 3.725, -3.075) ( 0.01, 0.01, 0.00) strbnd ( -0.199, -0.342, -1.642) ( -0.199, -0.342, -1.642) ( 0.00, 0.00, 0.00) - torsion ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.477, -0.975, -0.284) ( -0.477, -0.975, -0.284) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) @@ -6601,10 +6634,10 @@ bond ( -5.076, 7.231, -5.839) ( -5.075, 7.232, -5.838) ( 0.01, 0.02, 0.02) angle ( 15.920, 8.574, -3.218) ( 15.920, 8.575, -3.218) ( 0.00, 0.00, 0.01) strbnd ( 0.876, -0.556, 0.755) ( 0.876, -0.556, 0.755) ( 0.00, 0.00, 0.00) - torsion ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + torsion ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.922, -1.422, 0.511) ( -0.922, -1.422, 0.511) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 16 # gradients ok 17 # energy ---------------------------------------------------------------------------------------- @@ -7230,7 +7263,7 @@ torsion ( 0.000, 0.000, -0.009) ( 0.000, 0.000, -0.009) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.791, -1.108, -0.087) ( -3.791, -1.108, -0.087) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 17 ( 3.734, 1.697, 3.317) ( 3.735, 1.697, 3.320) ( 0.03, 0.05, 0.08) bond ( -0.653, 0.424, 1.150) ( -0.653, 0.424, 1.152) ( 0.05, 0.01, 0.21) angle ( 4.116, 2.173, 1.530) ( 4.116, 2.174, 1.530) ( 0.01, 0.02, 0.01) @@ -7238,21 +7271,21 @@ torsion ( 0.003, -0.008, 0.004) ( 0.003, -0.008, 0.004) ( 0.00, 0.00, 0.00) oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.916, -1.492, 0.852) ( -1.916, -1.492, 0.852) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 18 ( 3.357, 1.877, -3.735) ( 3.358, 1.877, -3.733) ( 0.04, 0.05, 0.07) bond ( -0.951, 0.766, -1.640) ( -0.950, 0.766, -1.638) ( 0.07, 0.04, 0.14) angle ( 4.217, 2.283, -1.378) ( 4.217, 2.284, -1.377) ( 0.01, 0.02, 0.01) strbnd ( 2.195, 0.574, 0.319) ( 2.195, 0.574, 0.319) ( 0.00, 0.00, 0.00) torsion ( -0.003, 0.007, 0.005) ( -0.003, 0.007, 0.005) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.102, -1.754, -1.042) ( -2.101, -1.754, -1.042) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 19 ( -0.948, 1.749, -2.994) ( -0.947, 1.750, -2.991) ( 0.08, 0.04, 0.10) bond ( 0.687, 0.547, -1.969) ( 0.688, 0.547, -1.967) ( 0.02, 0.01, 0.15) angle ( -2.117, 0.190, -0.687) ( -2.116, 0.190, -0.687) ( 0.02, 0.01, 0.01) strbnd ( -1.351, -0.031, 0.069) ( -1.351, -0.031, 0.069) ( 0.00, 0.00, 0.00) torsion ( -0.009, 1.344, 0.371) ( -0.009, 1.344, 0.371) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.840, -0.300, -0.777) ( 1.840, -0.300, -0.777) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( 3.214, -1.427, 1.320) ( 3.215, -1.424, 1.320) ( 0.03, 0.21, 0.05) @@ -7262,15 +7295,15 @@ torsion ( -0.001, -0.023, -0.087) ( -0.001, -0.023, -0.087) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 6.765, 1.580, 0.691) ( 6.765, 1.580, 0.691) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( 1.311, 2.298, 1.796) ( 1.312, 2.300, 1.798) ( 0.07, 0.08, 0.10) bond ( 0.773, 1.536, 1.536) ( 0.773, 1.538, 1.538) ( 0.03, 0.10, 0.10) angle ( -2.380, 0.642, 0.554) ( -2.380, 0.642, 0.554) ( 0.02, 0.02, 0.01) strbnd ( -1.349, -0.045, -0.017) ( -1.349, -0.045, -0.017) ( 0.00, 0.00, 0.00) torsion ( -0.034, 1.670, -1.653) ( -0.034, 1.670, -1.653) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.301, -1.506, 1.375) ( 4.301, -1.506, 1.375) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( -2.919, 0.875, 1.448) ( -2.916, 0.876, 1.450) ( 0.08, 0.06, 0.11) bond ( -1.870, -0.110, 1.417) ( -1.868, -0.110, 1.418) ( 0.12, 0.00, 0.09) angle ( 0.520, -2.593, 0.484) ( 0.520, -2.593, 0.484) ( 0.01, 0.02, 0.01) @@ -7278,7 +7311,7 @@ torsion ( -1.476, -0.834, -2.010) ( -1.476, -0.834, -2.010) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.746, 5.617, 1.547) ( -0.746, 5.617, 1.547) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( -2.177, 4.626, 0.844) ( -2.175, 4.628, 0.845) ( 0.08, 0.05, 0.06) bond ( 1.483, 1.776, 0.765) ( 1.485, 1.778, 0.766) ( 0.09, 0.10, 0.03) angle ( 2.624, -2.307, 0.268) ( 2.625, -2.307, 0.268) ( 0.01, 0.01, 0.01) @@ -7286,15 +7319,15 @@ torsion ( 0.519, 0.264, -1.620) ( 0.519, 0.264, -1.620) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -7.437, 6.134, 1.436) ( -7.437, 6.134, 1.436) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( -0.385, -1.508, -3.050) ( -0.385, -1.508, -3.047) ( 0.03, 0.04, 0.10) bond ( -0.615, 0.404, -1.895) ( -0.615, 0.404, -1.892) ( 0.02, 0.01, 0.16) angle ( 0.873, -1.806, -0.669) ( 0.873, -1.806, -0.669) ( 0.04, 0.03, 0.01) strbnd ( 0.665, -1.206, 0.041) ( 0.665, -1.206, 0.041) ( 0.00, 0.00, 0.00) torsion ( -0.796, -0.434, 0.166) ( -0.796, -0.434, 0.166) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.512, 1.534, -0.692) ( -0.512, 1.534, -0.692) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) ok 20 # gradients ok 21 # energy ---------------------------------------------------------------------------------------- @@ -7319,13 +7352,13 @@ torsion ( 4.294, 0.736, -3.479) ( 4.294, 0.736, -3.478) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -7.601, 1.652, -5.836) ( -7.601, 1.652, -5.836) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 3 ( 0.562, 0.076, -0.092) ( 0.566, 0.081, -0.087) ( 0.27, 0.04, 0.05) bond ( 6.097, -9.677, 17.390) ( 6.101, -9.673, 17.394) ( 0.06, 0.04, 0.02) angle ( -1.378, 4.252, -13.110) ( -1.376, 4.254, -13.108) ( 0.15, 0.05, 0.02) strbnd ( 0.257, 0.181, -0.552) ( 0.256, 0.180, -0.552) ( 0.03, 0.01, 0.03) torsion ( -0.355, 2.764, 0.802) ( -0.355, 2.764, 0.802) ( 0.00, 0.00, 0.01) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -4.059, 2.557, -4.623) ( -4.059, 2.557, -4.623) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 4 ( 1.701, 0.453, 0.308) ( 1.706, 0.472, 0.382) ( 0.30, 0.89, 2.27) @@ -7375,7 +7408,7 @@ torsion ( 0.192, 1.536, 1.287) ( 0.192, 1.536, 1.287) ( 0.00, 0.00, 0.01) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.897, -3.334, 3.446) ( 4.897, -3.334, 3.447) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 10 ( 0.279, 0.320, 0.215) ( 0.284, 0.326, 0.221) ( 0.13, 0.18, 0.13) bond ( 3.926, 16.947, -8.842) ( 3.929, 16.951, -8.838) ( 0.09, 0.02, 0.05) angle ( -6.642, -8.727, 8.491) ( -6.640, -8.725, 8.493) ( 0.03, 0.02, 0.02) @@ -7383,15 +7416,15 @@ torsion ( -1.013, -0.173, -1.195) ( -1.013, -0.173, -1.195) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.922, -2.802, -1.070) ( 5.922, -2.802, -1.070) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 11 ( 0.045, 0.535, 0.496) ( 0.051, 0.539, 0.502) ( 0.03, 0.24, 0.29) bond (-22.008, -2.471, -8.891) (-22.004, -2.468, -8.886) ( 0.02, 0.14, 0.05) angle ( 15.128, 5.024, 5.636) ( 15.130, 5.026, 5.638) ( 0.01, 0.04, 0.03) strbnd ( 6.334, 1.549, 3.089) ( 6.333, 1.548, 3.089) ( 0.01, 0.06, 0.02) torsion ( -1.616, 1.448, 1.166) ( -1.616, 1.448, 1.166) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.209, -5.015, -0.504) ( 2.209, -5.015, -0.504) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 12 ( 0.018, -0.028, -0.133) ( 0.022, -0.023, -0.128) ( 0.01, 0.01, 0.07) bond (-12.958, 14.537, 15.529) (-12.956, 14.540, 15.533) ( 0.02, 0.02, 0.03) angle ( 5.486, -21.711, -16.528) ( 5.488, -21.709, -16.526) ( 0.04, 0.01, 0.01) @@ -7399,13 +7432,13 @@ torsion ( 0.521, -0.105, -0.116) ( 0.521, -0.105, -0.116) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.814, -1.090, 2.040) ( 2.814, -1.090, 2.040) ( 0.00, 0.01, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 13 ( -0.345, -0.098, -0.425) ( -0.340, -0.093, -0.420) ( 0.16, 0.05, 0.21) bond ( 19.196, -25.927, -5.472) ( 19.199, -25.923, -5.468) ( 0.02, 0.01, 0.07) angle (-20.973, 31.110, 6.384) (-20.971, 31.112, 6.386) ( 0.01, 0.01, 0.03) strbnd ( -1.801, -4.659, 1.967) ( -1.802, -4.660, 1.966) ( 0.04, 0.02, 0.03) torsion ( 2.190, -1.303, -1.287) ( 2.190, -1.303, -1.287) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.043, 0.681, -2.017) ( 1.043, 0.681, -2.017) ( 0.01, 0.00, 0.00) electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 14 ( -0.307, -0.668, -1.189) ( -0.302, -0.663, -1.183) ( 0.14, 0.32, 0.49) @@ -7415,7 +7448,7 @@ torsion ( -0.738, 1.381, 1.027) ( -0.738, 1.381, 1.027) ( 0.00, 0.00, 0.01) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.849, 2.766, 1.934) ( 0.849, 2.766, 1.934) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 15 ( -0.779, -0.703, -0.742) ( -0.774, -0.698, -0.735) ( 0.36, 0.34, 0.45) bond ( 11.046, -27.491, 7.813) ( 11.049, -27.488, 7.817) ( 0.03, 0.01, 0.06) angle (-13.695, 29.364, -9.854) (-13.693, 29.366, -9.852) ( 0.01, 0.01, 0.02) @@ -7423,7 +7456,7 @@ torsion ( 0.502, -0.879, -1.143) ( 0.502, -0.879, -1.143) ( 0.00, 0.00, 0.01) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.527, -3.606, 3.470) ( 2.528, -3.606, 3.470) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 16 ( -1.065, -0.614, 1.036) ( -1.061, -0.609, 1.042) ( 0.45, 0.30, 0.57) bond ( -9.763, 20.766, -9.836) ( -9.759, 20.769, -9.832) ( 0.04, 0.02, 0.05) angle ( 9.857, -21.778, 9.882) ( 9.859, -21.776, 9.884) ( 0.02, 0.01, 0.02) @@ -7431,7 +7464,7 @@ torsion ( -0.978, 0.700, 0.353) ( -0.978, 0.700, 0.353) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.539, -0.634, -0.360) ( -0.539, -0.634, -0.360) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 17 ( -1.087, -1.069, 0.177) ( -1.083, -1.064, 0.183) ( 0.43, 0.46, 0.10) bond ( -1.901, -13.454, 13.464) ( -1.897, -13.450, 13.468) ( 0.18, 0.03, 0.03) angle ( 1.193, 9.826, -16.679) ( 1.195, 9.828, -16.677) ( 0.18, 0.02, 0.01) @@ -7447,7 +7480,7 @@ torsion ( -0.534, -0.161, -0.695) ( -0.534, -0.161, -0.695) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.214, 5.005, -1.050) ( -1.214, 5.005, -1.050) ( 0.01, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 19 ( -0.892, -1.390, -0.413) ( -0.887, -1.384, -0.407) ( 0.44, 0.43, 0.23) bond (-14.431, 0.239, -5.354) (-14.427, 0.243, -5.350) ( 0.03, 0.11, 0.08) angle ( 5.190, -0.465, 6.381) ( 5.192, -0.463, 6.382) ( 0.04, 0.09, 0.03) @@ -7455,7 +7488,7 @@ torsion ( 0.871, -0.786, -1.907) ( 0.871, -0.786, -1.907) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 5.131, 0.367, -0.974) ( 5.131, 0.367, -0.974) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 20 ( -1.255, 0.127, -0.110) ( -1.249, 0.133, -0.106) ( 0.48, 0.08, 0.05) bond ( 4.252, -7.565, 15.329) ( 4.256, -7.560, 15.333) ( 0.11, 0.06, 0.03) angle ( 1.408, 3.130, -7.552) ( 1.409, 3.132, -7.550) ( 0.13, 0.06, 0.03) @@ -7463,7 +7496,7 @@ torsion ( -2.747, 1.008, 0.725) ( -2.747, 1.008, 0.725) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -4.560, 3.029, -4.380) ( -4.560, 3.029, -4.380) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 21 ( 0.264, 0.125, -0.017) ( 0.269, 0.129, -0.012) ( 0.13, 0.06, 0.01) bond ( 20.008, -3.510, -2.218) ( 20.012, -3.507, -2.215) ( 0.02, 0.09, 0.15) angle (-15.231, -7.030, 0.649) (-15.229, -7.028, 0.651) ( 0.01, 0.03, 0.15) @@ -7485,23 +7518,23 @@ angle ( 10.251, 5.425, -14.704) ( 10.253, 5.427, -14.702) ( 0.02, 0.04, 0.01) strbnd ( 4.541, -0.227, 0.888) ( 4.540, -0.227, 0.888) ( 0.02, 0.01, 0.06) torsion ( -1.610, 3.720, 3.452) ( -1.610, 3.720, 3.452) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.819, 5.346, -4.109) ( -3.819, 5.346, -4.109) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 24 ( 0.357, 0.362, 0.364) ( 0.362, 0.367, 0.370) ( 0.18, 0.17, 0.22) bond ( 21.264, -13.824, -2.826) ( 21.268, -13.820, -2.821) ( 0.02, 0.03, 0.16) angle (-16.268, 12.918, 11.920) (-16.266, 12.920, 11.922) ( 0.01, 0.02, 0.01) strbnd ( -2.042, -2.702, 2.306) ( -2.043, -2.703, 2.305) ( 0.04, 0.04, 0.01) torsion ( 0.242, -0.309, -3.665) ( 0.242, -0.309, -3.665) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.840, 4.280, -7.371) ( -2.839, 4.280, -7.371) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 25 ( 0.298, 0.643, 0.076) ( 0.302, 0.648, 0.081) ( 0.13, 0.32, 0.04) bond (-17.007, -1.605, 19.177) (-17.004, -1.602, 19.181) ( 0.02, 0.21, 0.02) angle ( 20.289, -11.578, -20.050) ( 20.291, -11.576, -20.048) ( 0.01, 0.02, 0.01) strbnd ( 0.219, 4.268, -0.478) ( 0.218, 4.267, -0.478) ( 0.02, 0.02, 0.02) torsion ( -1.834, 2.984, 4.550) ( -1.834, 2.984, 4.550) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.369, 6.574, -3.124) ( -1.369, 6.574, -3.124) ( 0.01, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 26 ( 1.237, -0.464, 0.129) ( 1.240, -0.447, 0.209) ( 0.28, 0.80, 1.04) @@ -7525,7 +7558,7 @@ angle ( -2.167, 1.247, 4.426) ( -2.166, 1.247, 4.428) ( 0.01, 0.03, 0.03) strbnd ( 0.310, 0.219, 0.140) ( 0.310, 0.219, 0.140) ( 0.00, 0.00, 0.01) torsion ( 0.871, -2.454, -0.635) ( 0.871, -2.454, -0.635) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.614, -2.920, -1.379) ( -3.614, -2.920, -1.379) ( 0.00, 0.00, 0.00) electro ( -2.324, -0.193, -0.270) ( -2.323, -0.193, -0.270) ( 0.00, 0.00, 0.00) 29 ( 0.408, 0.492, 0.031) ( 0.409, 0.493, 0.034) ( 0.03, 0.06, 0.01) @@ -7535,7 +7568,7 @@ torsion ( 1.322, -0.173, 0.334) ( 1.322, -0.173, 0.334) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.277, 1.563, -4.719) ( 1.277, 1.563, -4.719) ( 0.01, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 30 ( 0.503, 0.033, 0.106) ( 0.504, 0.034, 0.109) ( 0.04, 0.00, 0.03) bond ( 0.388, -0.566, -1.877) ( 0.388, -0.566, -1.874) ( 0.01, 0.02, 0.16) angle ( -1.222, 1.435, -0.686) ( -1.222, 1.436, -0.686) ( 0.05, 0.04, 0.00) @@ -7543,7 +7576,7 @@ torsion ( -1.037, 0.246, -0.289) ( -1.037, 0.246, -0.289) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.936, -1.598, 1.950) ( 2.936, -1.598, 1.950) ( 0.00, 0.01, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 31 ( 0.438, 0.182, 0.134) ( 0.439, 0.183, 0.137) ( 0.04, 0.02, 0.04) bond ( -1.114, 1.979, 6.032) ( -1.114, 1.980, 6.035) ( 0.01, 0.02, 0.05) angle ( -0.690, 1.900, -0.751) ( -0.689, 1.901, -0.751) ( 0.04, 0.03, 0.01) @@ -7551,7 +7584,7 @@ torsion ( 0.783, 1.067, -0.206) ( 0.783, 1.067, -0.206) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.437, -4.688, -2.903) ( 1.437, -4.687, -2.903) ( 0.01, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 32 ( 1.763, 0.235, -0.010) ( 1.764, 0.236, -0.007) ( 0.05, 0.03, 0.00) bond ( -0.495, 1.091, 2.241) ( -0.495, 1.092, 2.244) ( 0.01, 0.06, 0.12) angle ( -0.145, 0.135, -0.098) ( -0.144, 0.135, -0.098) ( 0.01, 0.01, 0.00) @@ -7567,7 +7600,7 @@ torsion ( -2.226, 0.124, 1.967) ( -2.226, 0.125, 1.967) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.223, 1.107, -0.518) ( -1.223, 1.107, -0.518) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 34 ( 0.623, -0.025, -0.099) ( 0.624, -0.024, -0.096) ( 0.07, 0.00, 0.02) bond ( 1.205, -1.083, -2.206) ( 1.205, -1.082, -2.204) ( 0.05, 0.05, 0.10) angle ( 4.429, -0.679, 2.755) ( 4.430, -0.679, 2.755) ( 0.01, 0.03, 0.01) @@ -7575,7 +7608,7 @@ torsion ( -1.189, -0.747, -0.284) ( -1.189, -0.747, -0.284) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.797, 1.923, -1.593) ( -3.797, 1.923, -1.593) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 35 ( 0.727, 0.236, 0.113) ( 0.728, 0.237, 0.115) ( 0.07, 0.02, 0.03) bond ( -1.135, 1.111, 3.160) ( -1.134, 1.111, 3.163) ( 0.03, 0.03, 0.08) angle ( 2.191, 0.137, 0.737) ( 2.191, 0.138, 0.737) ( 0.03, 0.01, 0.01) @@ -7583,7 +7616,7 @@ torsion ( 0.059, -1.190, 0.439) ( 0.059, -1.190, 0.439) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.416, 1.359, -3.581) ( -1.416, 1.359, -3.581) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 36 ( 0.488, 0.270, -0.116) ( 0.489, 0.274, -0.116) ( 0.04, 0.09, 0.01) bond ( 0.456, -2.299, 0.220) ( 0.456, -2.296, 0.220) ( 0.01, 0.14, 0.00) angle ( 2.467, 0.624, 1.393) ( 2.468, 0.624, 1.393) ( 0.02, 0.00, 0.04) @@ -7591,7 +7624,7 @@ torsion ( 0.177, -0.003, -0.400) ( 0.177, -0.003, -0.399) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.636, 0.622, -2.274) ( -2.636, 0.622, -2.274) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 37 ( 0.151, 1.287, 0.431) ( 0.152, 1.288, 0.434) ( 0.02, 0.05, 0.13) bond ( 1.073, -0.388, -2.975) ( 1.074, -0.388, -2.972) ( 0.04, 0.00, 0.10) angle ( -0.794, 2.840, -0.658) ( -0.793, 2.841, -0.658) ( 0.04, 0.02, 0.00) @@ -7599,15 +7632,15 @@ torsion ( -1.057, -0.640, -0.298) ( -1.057, -0.640, -0.298) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.212, -1.506, 2.709) ( 1.212, -1.506, 2.709) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 38 ( 0.339, 0.476, 1.257) ( 0.340, 0.479, 1.258) ( 0.03, 0.15, 0.04) bond ( -0.805, 4.071, 0.318) ( -0.805, 4.074, 0.318) ( 0.01, 0.08, 0.00) angle ( 5.353, 1.181, -1.582) ( 5.354, 1.181, -1.581) ( 0.01, 0.00, 0.03) strbnd ( 0.930, -1.391, -0.658) ( 0.930, -1.391, -0.658) ( 0.00, 0.00, 0.00) torsion ( -1.899, -0.571, 2.506) ( -1.899, -0.571, 2.506) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.240, -2.814, 0.673) ( -3.240, -2.814, 0.673) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 39 ( 0.197, 1.934, -0.224) ( 0.197, 1.941, -0.201) ( 0.01, 0.38, 0.52) bond ( -0.322, 6.022, -1.065) ( -0.322, 6.026, -1.065) ( 0.00, 0.06, 0.01) angle ( -3.546, -0.243, -0.303) ( -3.546, -0.243, -0.303) ( 0.02, 0.00, 0.00) @@ -7621,9 +7654,9 @@ angle ( 0.476, 0.291, -0.208) ( 0.477, 0.292, -0.208) ( 0.02, 0.02, 0.00) strbnd ( 0.323, 0.150, 1.507) ( 0.323, 0.150, 1.507) ( 0.00, 0.00, 0.00) torsion ( 0.949, 0.716, -0.364) ( 0.949, 0.716, -0.364) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.355, -1.875, 0.672) ( 0.355, -1.875, 0.672) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 41 ( 0.302, 0.253, -0.644) ( 0.303, 0.254, -0.641) ( 0.04, 0.02, 0.15) bond ( -1.052, 0.652, 1.694) ( -1.051, 0.653, 1.696) ( 0.08, 0.02, 0.13) angle ( 1.336, 3.153, -0.385) ( 1.337, 3.153, -0.384) ( 0.03, 0.02, 0.01) @@ -7631,7 +7664,7 @@ torsion ( -0.348, -0.299, -0.101) ( -0.348, -0.299, -0.101) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.164, -3.428, -0.491) ( 0.164, -3.428, -0.491) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 42 ( 0.242, -0.051, 0.087) ( 0.243, -0.051, 0.090) ( 0.02, 0.00, 0.03) bond ( 0.344, 0.091, -1.789) ( 0.344, 0.091, -1.786) ( 0.00, 0.00, 0.18) angle ( -2.274, 1.718, -0.351) ( -2.274, 1.718, -0.351) ( 0.02, 0.03, 0.00) @@ -7639,7 +7672,7 @@ torsion ( 0.347, 0.529, 0.094) ( 0.347, 0.529, 0.094) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.770, -3.355, 1.666) ( 1.770, -3.355, 1.666) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 43 ( 0.647, 0.422, -0.099) ( 0.648, 0.424, -0.099) ( 0.07, 0.12, 0.01) bond ( -0.598, 1.361, 0.419) ( -0.597, 1.363, 0.420) ( 0.03, 0.19, 0.01) angle ( 0.254, 1.061, -3.086) ( 0.255, 1.061, -3.085) ( 0.01, 0.01, 0.02) @@ -7647,7 +7680,7 @@ torsion ( -0.431, -0.894, 2.291) ( -0.431, -0.894, 2.291) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.837, -1.379, 1.046) ( 0.837, -1.379, 1.046) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 44 ( -0.948, 0.980, 0.797) ( -0.947, 0.982, 0.799) ( 0.08, 0.11, 0.21) bond ( -0.079, -0.094, -0.209) ( -0.078, -0.094, -0.207) ( 0.00, 0.00, 0.05) angle ( -1.561, 3.754, -1.115) ( -1.561, 3.755, -1.115) ( 0.03, 0.01, 0.01) @@ -7655,23 +7688,23 @@ torsion ( 0.309, -1.025, 0.349) ( 0.309, -1.025, 0.349) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.408, -1.954, 1.389) ( 1.408, -1.954, 1.389) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 45 ( 0.684, 0.907, 1.369) ( 0.687, 0.908, 1.370) ( 0.16, 0.08, 0.09) bond ( -1.901, 0.820, 1.194) ( -1.899, 0.820, 1.195) ( 0.11, 0.03, 0.07) angle ( -0.217, -0.147, -0.244) ( -0.216, -0.146, -0.243) ( 0.00, 0.01, 0.01) strbnd ( -0.303, -0.559, -1.117) ( -0.303, -0.559, -1.117) ( 0.00, 0.00, 0.00) torsion ( 1.043, 1.144, 0.873) ( 1.043, 1.144, 0.873) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.062, -0.352, 0.663) ( 2.062, -0.352, 0.663) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 46 ( 0.367, -0.348, 0.007) ( 0.368, -0.346, 0.010) ( 0.03, 0.04, 0.00) bond ( -0.743, 1.942, 5.648) ( -0.743, 1.943, 5.651) ( 0.01, 0.02, 0.05) angle ( -0.834, 2.429, -0.945) ( -0.833, 2.430, -0.945) ( 0.05, 0.03, 0.01) strbnd ( -0.401, -0.284, -2.968) ( -0.401, -0.284, -2.968) ( 0.00, 0.00, 0.00) torsion ( -0.439, -1.217, 0.361) ( -0.439, -1.217, 0.361) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.784, -3.218, -2.089) ( 2.784, -3.218, -2.089) ( 0.00, 0.01, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 47 ( 0.015, -0.265, 0.203) ( 0.016, -0.264, 0.204) ( 0.00, 0.04, 0.03) bond ( 0.405, -0.387, -0.424) ( 0.406, -0.386, -0.423) ( 0.05, 0.04, 0.05) angle ( -2.172, -2.780, 0.450) ( -2.171, -2.779, 0.451) ( 0.02, 0.01, 0.02) @@ -7679,15 +7712,15 @@ torsion ( -0.276, -0.075, -0.196) ( -0.276, -0.075, -0.196) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.791, 2.933, -1.421) ( 2.791, 2.933, -1.421) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 48 ( -0.723, -0.153, -2.370) ( -0.721, -0.151, -2.369) ( 0.12, 0.03, 0.05) bond ( -0.977, 1.037, 0.786) ( -0.976, 1.038, 0.787) ( 0.12, 0.13, 0.06) angle ( -0.242, 0.074, -0.397) ( -0.241, 0.074, -0.397) ( 0.01, 0.00, 0.01) strbnd ( 0.015, -0.149, -2.101) ( 0.015, -0.149, -2.101) ( 0.00, 0.00, 0.00) torsion ( -0.303, 0.391, -0.890) ( -0.303, 0.391, -0.890) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.783, -1.505, 0.233) ( 0.783, -1.505, 0.233) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 49 ( 0.608, -1.419, -1.523) ( 0.609, -1.418, -1.520) ( 0.04, 0.06, 0.21) bond ( -0.234, 0.800, -3.501) ( -0.234, 0.800, -3.498) ( 0.00, 0.01, 0.09) angle ( -0.364, -2.283, -0.498) ( -0.363, -2.283, -0.498) ( 0.02, 0.02, 0.00) @@ -7695,7 +7728,7 @@ torsion ( 1.209, -1.267, -0.371) ( 1.209, -1.267, -0.371) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.305, 0.529, 0.922) ( 1.305, 0.529, 0.922) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 50 ( -1.926, -0.688, -1.325) ( -1.925, -0.687, -1.323) ( 0.05, 0.11, 0.15) bond ( 1.132, -1.684, -2.127) ( 1.132, -1.683, -2.125) ( 0.04, 0.07, 0.08) angle ( -0.386, 0.713, -0.771) ( -0.386, 0.714, -0.771) ( 0.02, 0.03, 0.02) @@ -7703,7 +7736,7 @@ torsion ( -0.839, 0.814, -1.092) ( -0.839, 0.814, -1.092) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.600, -0.054, 0.749) ( -1.600, -0.054, 0.749) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 51 ( 0.141, -0.997, -1.237) ( 0.142, -0.996, -1.234) ( 0.01, 0.10, 0.23) bond ( -0.459, 0.602, -1.366) ( -0.459, 0.603, -1.364) ( 0.01, 0.03, 0.19) angle ( -4.840, -2.593, 0.483) ( -4.839, -2.592, 0.483) ( 0.01, 0.02, 0.01) @@ -7711,7 +7744,7 @@ torsion ( 0.609, -0.569, -0.456) ( 0.609, -0.569, -0.456) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 4.897, 2.477, 1.772) ( 4.897, 2.477, 1.772) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 52 ( -2.339, 0.741, 1.932) ( -2.338, 0.742, 1.935) ( 0.04, 0.05, 0.15) bond ( -0.579, 0.431, -1.609) ( -0.579, 0.431, -1.606) ( 0.02, 0.01, 0.17) angle ( -0.609, 2.084, 0.779) ( -0.609, 2.085, 0.779) ( 0.03, 0.02, 0.01) @@ -7719,7 +7752,7 @@ torsion ( -0.384, -0.338, 0.048) ( -0.384, -0.338, 0.048) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.864, -2.295, 1.315) ( -0.864, -2.295, 1.315) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 53 ( 0.056, -1.491, 2.539) ( 0.057, -1.489, 2.541) ( 0.01, 0.13, 0.06) bond ( -1.594, 2.825, 2.595) ( -1.593, 2.827, 2.597) ( 0.03, 0.05, 0.05) angle ( -1.514, -2.295, 1.569) ( -1.514, -2.295, 1.569) ( 0.03, 0.01, 0.02) @@ -7727,7 +7760,7 @@ torsion ( 1.240, -0.042, 0.806) ( 1.240, -0.042, 0.806) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 1.431, -1.377, -0.123) ( 1.431, -1.377, -0.123) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 54 ( -1.751, -1.353, 0.152) ( -1.750, -1.352, 0.155) ( 0.04, 0.06, 0.05) bond ( -0.353, 0.090, 4.018) ( -0.353, 0.090, 4.021) ( 0.00, 0.00, 0.08) angle ( -0.173, -0.584, -0.002) ( -0.173, -0.583, -0.002) ( 0.01, 0.04, 0.00) @@ -7743,31 +7776,31 @@ torsion ( 0.064, 0.110, -0.250) ( 0.064, 0.110, -0.250) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.132, 4.501, -0.381) ( -0.132, 4.502, -0.381) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 56 ( -1.939, -2.205, 0.809) ( -1.938, -2.204, 0.812) ( 0.03, 0.03, 0.27) bond ( -0.033, -0.223, -1.036) ( -0.033, -0.223, -1.033) ( 0.00, 0.00, 0.31) angle ( 0.267, -3.200, 0.682) ( 0.267, -3.200, 0.682) ( 0.01, 0.02, 0.00) strbnd ( 0.445, -0.392, 0.323) ( 0.445, -0.392, 0.323) ( 0.00, 0.00, 0.00) torsion ( -0.267, -0.189, 0.049) ( -0.267, -0.189, 0.049) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.350, 1.799, 0.791) ( -2.350, 1.799, 0.791) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 57 ( -0.222, -0.711, 1.702) ( -0.221, -0.708, 1.703) ( 0.02, 0.16, 0.07) bond ( -1.423, -3.015, 1.849) ( -1.423, -3.013, 1.849) ( 0.03, 0.07, 0.04) angle ( 1.191, -0.586, -0.038) ( 1.192, -0.586, -0.038) ( 0.04, 0.01, 0.00) strbnd ( 0.927, 0.636, -0.840) ( 0.927, 0.636, -0.840) ( 0.00, 0.00, 0.00) torsion ( 0.670, 0.208, 0.854) ( 0.670, 0.208, 0.854) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.587, 2.046, -0.123) ( -1.587, 2.046, -0.123) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 58 ( -1.065, -1.279, -1.213) ( -1.063, -1.277, -1.212) ( 0.14, 0.19, 0.05) bond ( -0.341, 0.461, 0.108) ( -0.340, 0.463, 0.108) ( 0.04, 0.10, 0.00) angle ( -2.386, -1.529, -0.965) ( -2.386, -1.529, -0.964) ( 0.01, 0.01, 0.04) strbnd ( -0.455, -0.647, -0.480) ( -0.455, -0.647, -0.480) ( 0.00, 0.00, 0.00) torsion ( 0.014, 0.020, -0.041) ( 0.014, 0.020, -0.041) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.104, 0.416, 0.164) ( 2.104, 0.416, 0.164) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 59 ( -1.070, -1.140, -0.343) ( -1.069, -1.138, -0.342) ( 0.10, 0.20, 0.03) bond ( -1.369, -2.487, 1.248) ( -1.368, -2.484, 1.248) ( 0.05, 0.09, 0.04) angle ( -1.624, 0.072, -1.636) ( -1.623, 0.072, -1.636) ( 0.03, 0.00, 0.03) @@ -7775,7 +7808,7 @@ torsion ( -0.290, 0.448, 0.574) ( -0.290, 0.448, 0.574) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.584, 0.022, 0.237) ( 2.584, 0.022, 0.237) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 60 ( -0.358, -1.910, -0.423) ( -0.357, -1.909, -0.420) ( 0.02, 0.03, 0.14) bond ( 0.061, -0.358, -2.470) ( 0.061, -0.358, -2.467) ( 0.00, 0.00, 0.13) angle ( -2.334, -1.222, 0.119) ( -2.334, -1.222, 0.119) ( 0.02, 0.04, 0.00) @@ -7783,7 +7816,7 @@ torsion ( 0.016, -0.218, 0.032) ( 0.016, -0.218, 0.032) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.778, -0.179, 1.331) ( 2.778, -0.179, 1.331) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 61 ( -1.170, -0.189, 0.037) ( -1.168, -0.188, 0.038) ( 0.25, 0.01, 0.00) bond ( -0.428, -0.103, -0.175) ( -0.426, -0.103, -0.175) ( 0.12, 0.00, 0.01) angle ( -0.331, -3.245, 2.709) ( -0.331, -3.244, 2.710) ( 0.00, 0.01, 0.02) @@ -7791,7 +7824,7 @@ torsion ( -0.146, 0.349, 0.151) ( -0.146, 0.349, 0.152) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.626, 3.464, -3.153) ( 0.626, 3.464, -3.153) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 62 ( -1.757, 0.318, 0.260) ( -1.756, 0.322, 0.261) ( 0.03, 0.11, 0.02) bond ( 0.021, 0.242, -0.008) ( 0.021, 0.246, -0.008) ( 0.00, 0.08, 0.00) angle ( 2.576, -0.098, 3.676) ( 2.576, -0.098, 3.677) ( 0.02, 0.00, 0.01) @@ -7799,7 +7832,7 @@ torsion ( 1.156, -0.106, -0.183) ( 1.156, -0.106, -0.183) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -5.770, -0.362, -4.129) ( -5.770, -0.362, -4.129) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 63 ( -1.163, 0.855, -0.571) ( -1.161, 0.856, -0.570) ( 0.16, 0.08, 0.09) bond ( -1.786, 1.024, 1.583) ( -1.785, 1.024, 1.584) ( 0.09, 0.05, 0.08) angle ( 0.428, -0.094, 0.542) ( 0.428, -0.094, 0.543) ( 0.01, 0.00, 0.02) @@ -7807,21 +7840,21 @@ torsion ( -0.227, -0.276, -0.077) ( -0.227, -0.276, -0.077) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.250, 0.874, -3.065) ( -0.250, 0.874, -3.065) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 64 ( 0.790, -0.989, 0.790) ( 0.793, -0.989, 0.791) ( 0.25, 0.06, 0.06) bond ( 0.666, 0.107, -0.162) ( 0.670, 0.108, -0.162) ( 0.21, 0.00, 0.00) angle ( -0.821, -2.989, -5.388) ( -0.821, -2.989, -5.387) ( 0.00, 0.02, 0.01) strbnd ( -1.303, -0.763, -0.758) ( -1.303, -0.763, -0.758) ( 0.00, 0.00, 0.00) torsion ( 0.159, -0.563, 0.283) ( 0.159, -0.563, 0.283) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.089, 3.218, 6.815) ( 2.089, 3.218, 6.815) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 65 ( 1.612, 1.583, -0.244) ( 1.613, 1.584, -0.242) ( 0.09, 0.07, 0.05) bond ( -0.305, 0.226, -0.426) ( -0.304, 0.227, -0.424) ( 0.03, 0.01, 0.08) angle ( 3.626, -2.262, -3.808) ( 3.626, -2.262, -3.808) ( 0.01, 0.02, 0.01) strbnd ( 0.994, -1.017, -0.192) ( 0.994, -1.017, -0.192) ( 0.00, 0.00, 0.00) torsion ( 0.256, 0.264, -0.043) ( 0.256, 0.264, -0.043) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -2.959, 4.372, 4.225) ( -2.958, 4.372, 4.225) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 66 ( -1.078, 0.552, -0.760) ( -1.078, 0.556, -0.759) ( 0.06, 0.19, 0.05) @@ -7829,15 +7862,15 @@ angle ( 2.563, -0.264, -3.412) ( 2.563, -0.264, -3.411) ( 0.02, 0.00, 0.02) strbnd ( 0.510, 0.950, -1.109) ( 0.510, 0.950, -1.109) ( 0.00, 0.00, 0.00) torsion ( -0.450, 0.067, -0.151) ( -0.450, 0.067, -0.151) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.718, -0.314, 3.909) ( -3.717, -0.314, 3.909) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 67 ( 0.335, 0.250, 0.082) ( 0.336, 0.253, 0.082) ( 0.02, 0.08, 0.00) bond ( 0.214, -2.095, 0.090) ( 0.214, -2.092, 0.090) ( 0.00, 0.16, 0.00) angle ( 1.574, 0.246, 1.978) ( 1.575, 0.246, 1.979) ( 0.04, 0.00, 0.03) strbnd ( -0.777, 1.004, 0.844) ( -0.777, 1.004, 0.844) ( 0.00, 0.00, 0.00) torsion ( 0.181, -0.026, -1.050) ( 0.181, -0.026, -1.050) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -0.857, 1.121, -1.781) ( -0.857, 1.121, -1.781) ( 0.00, 0.00, 0.00) electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 68 ( 0.121, 0.190, 0.044) ( 0.122, 0.191, 0.047) ( 0.01, 0.02, 0.01) @@ -7845,9 +7878,9 @@ angle ( 2.086, -0.263, 0.761) ( 2.086, -0.263, 0.761) ( 0.03, 0.01, 0.01) strbnd ( 0.013, -1.433, -0.930) ( 0.013, -1.433, -0.930) ( 0.00, 0.00, 0.00) torsion ( 0.192, -1.114, 0.423) ( 0.192, -1.114, 0.423) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.224, 2.055, -3.126) ( -1.224, 2.055, -3.126) ( 0.01, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 69 ( 0.670, 0.306, 0.584) ( 0.671, 0.308, 0.587) ( 0.08, 0.04, 0.14) bond ( -0.089, 0.102, 0.156) ( -0.088, 0.103, 0.158) ( 0.01, 0.01, 0.03) angle ( 0.439, -2.980, 2.180) ( 0.440, -2.979, 2.180) ( 0.02, 0.02, 0.01) @@ -7869,9 +7902,9 @@ angle ( -0.676, -2.968, -5.094) ( -0.676, -2.967, -5.094) ( 0.01, 0.02, 0.01) strbnd ( -1.187, -1.166, -0.503) ( -1.187, -1.166, -0.503) ( 0.00, 0.00, 0.00) torsion ( 0.213, -0.324, 0.223) ( 0.213, -0.324, 0.223) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 0.541, 3.906, 6.307) ( 0.541, 3.906, 6.307) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 72 ( 0.699, 1.329, -0.078) ( 0.701, 1.330, -0.076) ( 0.13, 0.05, 0.02) bond ( -0.821, 0.235, -0.916) ( -0.820, 0.235, -0.914) ( 0.12, 0.00, 0.17) angle ( 3.757, -0.301, -3.447) ( 3.757, -0.301, -3.447) ( 0.01, 0.01, 0.01) @@ -7879,7 +7912,7 @@ torsion ( -0.090, -0.149, 0.042) ( -0.090, -0.149, 0.042) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.334, 2.346, 4.357) ( -3.333, 2.346, 4.357) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 73 ( -0.259, 0.501, -0.385) ( -0.258, 0.505, -0.385) ( 0.01, 0.17, 0.02) bond ( -0.024, 0.218, -0.017) ( -0.024, 0.221, -0.017) ( 0.00, 0.07, 0.00) angle ( 2.747, 0.023, -3.607) ( 2.748, 0.023, -3.606) ( 0.02, 0.00, 0.02) @@ -7887,7 +7920,7 @@ torsion ( -0.122, -0.015, -0.032) ( -0.122, -0.015, -0.032) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -3.075, -0.304, 4.442) ( -3.075, -0.304, 4.443) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 74 ( 0.198, 2.184, -1.550) ( 0.200, 2.185, -1.547) ( 0.04, 0.04, 0.23) bond ( -0.028, -0.019, -0.043) ( -0.027, -0.018, -0.040) ( 0.00, 0.00, 0.01) angle ( 2.217, 0.907, -1.911) ( 2.217, 0.907, -1.911) ( 0.01, 0.00, 0.01) @@ -8070,9 +8103,9 @@ angle ( -3.259, -5.157, -2.297) ( -3.259, -5.157, -2.296) ( 0.01, 0.01, 0.02) strbnd ( -0.614, 0.250, -1.435) ( -0.614, 0.250, -1.435) ( 0.00, 0.00, 0.00) torsion ( 0.085, 0.141, 0.107) ( 0.085, 0.141, 0.107) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + oop ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( 2.173, 5.843, 3.461) ( 2.173, 5.843, 3.461) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 22 ( 0.001, 0.003, -0.029) ( 0.002, 0.004, -0.025) ( 0.00, 0.00, 0.01) bond ( -0.285, 1.036, -3.315) ( -0.285, 1.036, -3.312) ( 0.00, 0.03, 0.09) angle ( 0.181, -1.068, -0.350) ( 0.182, -1.067, -0.350) ( 0.01, 0.05, 0.00) @@ -8080,715 +8113,20 @@ torsion ( 0.351, -0.744, -0.263) ( 0.351, -0.744, -0.263) ( 0.00, 0.00, 0.00) oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) vdw ( -1.220, 1.896, 3.796) ( -1.220, 1.896, 3.796) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) + electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) 23 ( 0.003, -0.104, -0.010) ( 0.007, -0.098, -0.004) ( 0.00, 0.06, 0.01) bond ( -3.127, -17.812, 3.460) ( -3.123, -17.808, 3.465) ( 0.13, 0.02, 0.13) - angle ( 0.202, 7.188, -7.171) ( 0.204, 7.190, -7.169) ( 0.04, 0.03, 0.02) - strbnd ( 3.369, -1.380, -2.585) ( 3.367, -1.380, -2.585) ( 0.04, 0.05, 0.01) - torsion ( -0.244, 1.380, 2.916) ( -0.244, 1.381, 2.917) ( 0.00, 0.01, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.952, 7.510, 2.573) ( -0.952, 7.510, 2.573) ( 0.00, 0.00, 0.00) - electro ( 0.755, 3.009, 0.796) ( 0.755, 3.009, 0.796) ( 0.00, 0.00, 0.00) -24 ( 0.007, -0.018, -0.003) ( 0.008, -0.016, -0.001) ( 0.00, 0.00, 0.00) - bond ( 0.060, 1.792, 1.597) ( 0.060, 1.794, 1.599) ( 0.00, 0.10, 0.09) - angle ( -3.575, -1.364, 1.663) ( -3.575, -1.363, 1.664) ( 0.02, 0.02, 0.02) - strbnd ( -0.521, 0.527, -1.117) ( -0.521, 0.527, -1.117) ( 0.00, 0.00, 0.00) - torsion ( 0.187, -0.049, 0.048) ( 0.187, -0.049, 0.048) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 3.856, -0.925, -2.194) ( 3.857, -0.925, -2.194) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -25 ( 0.066, -0.058, -0.075) ( 0.072, -0.052, -0.069) ( 0.04, 0.03, 0.04) - bond (-13.633, 0.941, 12.416) (-13.629, 0.945, 12.421) ( 0.03, 0.39, 0.04) - angle ( 2.350, 2.416, -9.408) ( 2.353, 2.418, -9.406) ( 0.09, 0.08, 0.02) - strbnd ( 0.055, 4.163, -0.501) ( 0.054, 4.162, -0.502) ( 0.00, 0.03, 0.04) - torsion ( 2.065, -2.248, 1.183) ( 2.065, -2.248, 1.183) ( 0.00, 0.00, 0.01) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 6.223, -3.991, -2.667) ( 6.223, -3.991, -2.667) ( 0.00, 0.00, 0.00) - electro ( 3.006, -1.338, -1.097) ( 3.006, -1.338, -1.097) ( 0.00, 0.00, 0.00) -26 ( -0.004, -0.009, 0.017) ( -0.004, -0.008, 0.020) ( 0.00, 0.00, 0.01) - bond ( -0.508, 1.114, -2.671) ( -0.508, 1.115, -2.668) ( 0.01, 0.04, 0.10) - angle ( -3.386, -1.138, 0.169) ( -3.386, -1.138, 0.170) ( 0.02, 0.04, 0.00) - strbnd ( -0.285, 1.027, 0.757) ( -0.285, 1.027, 0.757) ( 0.00, 0.00, 0.00) - torsion ( -0.469, 0.506, 0.301) ( -0.469, 0.506, 0.301) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 4.645, -1.519, 1.461) ( 4.645, -1.518, 1.461) ( 0.00, 0.01, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -27 ( -0.053, 0.087, 0.044) ( -0.047, 0.093, 0.047) ( 0.03, 0.05, 0.01) - bond (-15.148, -5.941, -10.039) (-15.143, -5.937, -10.037) ( 0.03, 0.08, 0.02) - angle ( -5.200, -8.059, 8.744) ( -5.198, -8.058, 8.745) ( 0.03, 0.02, 0.02) - strbnd ( -1.543, -1.202, 1.549) ( -1.544, -1.203, 1.548) ( 0.04, 0.04, 0.03) - torsion ( -0.831, 0.963, -3.227) ( -0.831, 0.963, -3.226) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 6.577, 4.313, -0.037) ( 6.577, 4.313, -0.037) ( 0.00, 0.00, 0.00) - electro ( 16.093, 10.014, 3.054) ( 16.093, 10.014, 3.054) ( 0.00, 0.00, 0.00) -28 ( 0.001, 0.014, -0.042) ( 0.002, 0.015, -0.039) ( 0.00, 0.00, 0.01) - bond ( 0.463, -1.202, 2.694) ( 0.464, -1.202, 2.697) ( 0.00, 0.05, 0.10) - angle ( 0.035, -0.321, -0.149) ( 0.036, -0.320, -0.149) ( 0.00, 0.01, 0.00) - strbnd ( -0.222, -0.567, -1.132) ( -0.222, -0.567, -1.132) ( 0.00, 0.00, 0.00) - torsion ( 0.438, -1.586, -0.782) ( 0.438, -1.586, -0.782) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.714, 3.690, -0.674) ( -0.714, 3.690, -0.674) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -29 ( 0.008, 0.030, 0.008) ( 0.008, 0.032, 0.009) ( 0.00, 0.01, 0.00) - bond ( -0.087, -1.217, -1.051) ( -0.087, -1.215, -1.050) ( 0.00, 0.16, 0.14) - angle ( -0.252, 0.112, -0.110) ( -0.251, 0.113, -0.110) ( 0.02, 0.00, 0.00) - strbnd ( 0.115, 0.045, 1.331) ( 0.115, 0.045, 1.331) ( 0.00, 0.00, 0.00) - torsion ( -0.210, 0.236, -0.255) ( -0.210, 0.236, -0.255) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.441, 0.855, 0.093) ( 0.441, 0.855, 0.093) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -30 ( -0.057, 0.017, 0.002) ( -0.054, 0.018, 0.002) ( 0.02, 0.00, 0.00) - bond ( -1.435, 0.851, -0.093) ( -1.433, 0.852, -0.093) ( 0.17, 0.08, 0.00) - angle ( -0.122, -0.244, -0.343) ( -0.122, -0.243, -0.342) ( 0.00, 0.01, 0.02) - strbnd ( 0.598, -0.582, 1.034) ( 0.598, -0.582, 1.034) ( 0.00, 0.00, 0.00) - torsion ( -0.027, -0.078, -0.298) ( -0.027, -0.078, -0.297) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.930, 0.070, -0.299) ( 0.930, 0.070, -0.299) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -31 ( 0.005, -0.020, 0.028) ( 0.006, -0.019, 0.031) ( 0.00, 0.00, 0.01) - bond ( 0.312, -0.902, 2.849) ( 0.312, -0.902, 2.852) ( 0.00, 0.03, 0.11) - angle ( -0.502, 0.107, 0.089) ( -0.501, 0.107, 0.089) ( 0.03, 0.01, 0.00) - strbnd ( -0.940, 0.677, -0.469) ( -0.940, 0.677, -0.469) ( 0.00, 0.00, 0.00) - torsion ( -1.235, 1.160, 0.502) ( -1.235, 1.160, 0.502) ( 0.00, 0.00, 0.00) - oop ( 0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 2.370, -1.062, -2.942) ( 2.370, -1.062, -2.942) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -32 ( 0.003, -0.016, -0.010) ( 0.005, -0.014, -0.009) ( 0.00, 0.00, 0.00) - bond ( -0.021, -0.018, 0.009) ( -0.019, -0.016, 0.009) ( 0.00, 0.00, 0.00) - angle ( -0.160, 0.222, 0.062) ( -0.160, 0.222, 0.062) ( 0.00, 0.01, 0.00) - strbnd ( -0.521, 0.030, -0.937) ( -0.521, 0.030, -0.938) ( 0.00, 0.00, 0.01) - torsion ( 0.592, -0.069, 1.057) ( 0.592, -0.069, 1.057) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.902, 0.369, 0.423) ( 0.902, 0.369, 0.423) ( 0.00, 0.00, 0.00) - electro ( -0.789, -0.550, -0.623) ( -0.789, -0.550, -0.623) ( 0.00, 0.00, 0.00) -33 ( -0.030, -0.053, 0.105) ( -0.019, -0.047, 0.022) ( 0.03, 0.03, 0.87) - bond ( -1.616, -9.765, 0.189) ( -1.616, -9.756, 0.189) ( 0.01, 0.10, 0.00) - angle ( 20.636, -3.367, 2.623) ( 20.637, -3.367, 2.623) ( 0.00, 0.00, 0.00) - strbnd ( 0.680, 2.049, 0.006) ( 0.680, 2.049, 0.006) ( 0.00, 0.00, 0.00) - torsion ( -0.339, 0.113, 2.931) ( -0.339, 0.113, 2.931) ( 0.00, 0.00, 0.00) - oop ( -0.045, 0.015, 0.377) ( -0.035, 0.012, 0.294) ( 0.04, 0.00, 3.13) - vdw ( -3.314, -1.163, -1.055) ( -3.314, -1.163, -1.055) ( 0.00, 0.00, 0.00) - electro (-16.031, 12.066, -4.968) (-16.031, 12.066, -4.968) ( 0.00, 0.00, 0.00) -34 ( 0.021, 0.161, 0.031) ( 0.031, 0.164, -0.005) ( 0.02, 0.05, 0.11) - bond ( -3.927, 2.786, -0.594) ( -3.921, 2.789, -0.594) ( 0.15, 0.13, 0.00) - angle ( 16.132, -2.853, 2.371) ( 16.132, -2.852, 2.372) ( 0.00, 0.05, 0.01) - strbnd ( -0.845, 3.072, -0.258) ( -0.845, 3.072, -0.258) ( 0.00, 0.01, 0.00) - torsion ( 0.144, -0.049, -1.174) ( 0.144, -0.049, -1.173) ( 0.00, 0.00, 0.02) - oop ( -0.036, 0.013, 0.294) ( -0.031, 0.011, 0.258) ( 0.02, 0.00, 1.06) - vdw (-11.558, -6.965, 1.339) (-11.558, -6.965, 1.339) ( 0.00, 0.00, 0.00) - electro ( 0.110, 4.158, -1.948) ( 0.110, 4.158, -1.948) ( 0.00, 0.00, 0.00) -35 ( -0.101, -0.084, -0.013) ( -0.097, -0.081, -0.013) ( 0.04, 0.02, 0.00) - bond ( 0.234, 0.187, 0.015) ( 0.238, 0.189, 0.015) ( 0.08, 0.04, 0.00) - angle ( -9.135, 11.640, -1.684) ( -9.135, 11.640, -1.684) ( 0.00, 0.00, 0.00) - strbnd ( -1.252, -0.773, -0.092) ( -1.252, -0.773, -0.092) ( 0.00, 0.00, 0.00) - torsion ( 0.050, -0.027, -0.452) ( 0.050, -0.027, -0.452) ( 0.00, 0.00, 0.01) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.204, 0.155, -0.034) ( -0.204, 0.155, -0.034) ( 0.00, 0.00, 0.00) - electro ( 10.207, -11.265, 2.235) ( 10.207, -11.265, 2.235) ( 0.00, 0.00, 0.00) -36 ( 0.023, -0.029, -0.012) ( 0.030, -0.025, -0.007) ( 0.01, 0.01, 0.01) - bond ( 1.340, -4.011, -2.272) ( 1.346, -4.008, -2.268) ( 0.45, 0.07, 0.18) - angle ( -1.289, 0.664, 1.982) ( -1.288, 0.666, 1.984) ( 0.08, 0.10, 0.10) - strbnd ( 0.232, -0.792, 0.487) ( 0.231, -0.793, 0.486) ( 0.02, 0.03, 0.03) - torsion ( -1.155, 0.195, -0.282) ( -1.155, 0.195, -0.282) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.717, 5.471, 0.093) ( 0.717, 5.471, 0.093) ( 0.00, 0.00, 0.00) - electro ( 0.179, -1.556, -0.020) ( 0.179, -1.556, -0.020) ( 0.00, 0.00, 0.00) -37 ( 0.029, 0.043, -0.047) ( 0.034, 0.047, -0.041) ( 0.01, 0.02, 0.03) - bond ( 1.435, -3.700, -1.718) ( 1.438, -3.696, -1.713) ( 0.27, 0.10, 0.31) - angle ( 0.328, 0.545, 0.556) ( 0.329, 0.546, 0.558) ( 0.03, 0.08, 0.12) - strbnd ( -0.069, -0.300, 0.440) ( -0.069, -0.301, 0.439) ( 0.00, 0.01, 0.04) - torsion ( 0.956, 0.601, 0.479) ( 0.956, 0.601, 0.479) ( 0.01, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -2.832, 4.136, 0.355) ( -2.832, 4.136, 0.355) ( 0.00, 0.00, 0.00) - electro ( 0.210, -1.238, -0.159) ( 0.210, -1.238, -0.159) ( 0.00, 0.00, 0.00) -38 ( -0.013, 0.017, -0.005) ( -0.012, 0.019, -0.003) ( 0.00, 0.00, 0.00) - bond ( 0.435, -0.767, 0.899) ( 0.435, -0.766, 0.901) ( 0.02, 0.11, 0.17) - angle ( 0.496, 0.229, -0.045) ( 0.496, 0.229, -0.045) ( 0.03, 0.00, 0.00) - strbnd ( -0.157, 0.213, -0.446) ( -0.157, 0.213, -0.446) ( 0.00, 0.00, 0.00) - torsion ( 0.563, -0.012, -0.282) ( 0.563, -0.012, -0.283) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.724, 0.200, 0.015) ( -0.724, 0.200, 0.015) ( 0.00, 0.00, 0.00) - electro ( -0.625, 0.154, -0.145) ( -0.625, 0.154, -0.145) ( 0.00, 0.00, 0.00) -39 ( -0.005, -0.008, 0.012) ( -0.003, -0.007, 0.014) ( 0.00, 0.00, 0.00) - bond ( 0.863, 0.325, -0.866) ( 0.864, 0.325, -0.865) ( 0.15, 0.01, 0.15) - angle ( 0.432, -1.789, -0.241) ( 0.433, -1.789, -0.241) ( 0.01, 0.02, 0.01) - strbnd ( -0.148, -0.179, 0.111) ( -0.148, -0.179, 0.111) ( 0.00, 0.00, 0.00) - torsion ( 0.500, -0.248, 0.406) ( 0.500, -0.248, 0.406) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -1.310, 2.013, 0.436) ( -1.310, 2.013, 0.436) ( 0.00, 0.00, 0.00) - electro ( -0.342, -0.130, 0.167) ( -0.342, -0.130, 0.167) ( 0.00, 0.00, 0.00) -40 ( -0.029, -0.039, 0.034) ( -0.028, -0.036, 0.035) ( 0.00, 0.01, 0.00) - bond ( -0.592, -0.813, 0.455) ( -0.591, -0.811, 0.456) ( 0.06, 0.16, 0.03) - angle ( -0.349, 0.064, -0.339) ( -0.348, 0.064, -0.339) ( 0.01, 0.00, 0.02) - strbnd ( 0.254, 0.177, -0.194) ( 0.254, 0.177, -0.194) ( 0.00, 0.00, 0.00) - torsion ( -0.231, -0.135, -0.540) ( -0.231, -0.135, -0.540) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.504, 0.376, 0.413) ( 0.504, 0.376, 0.413) ( 0.00, 0.00, 0.00) - electro ( 0.385, 0.292, 0.238) ( 0.385, 0.292, 0.238) ( 0.00, 0.00, 0.00) -41 ( 0.005, -0.012, 0.021) ( 0.005, -0.011, 0.024) ( 0.00, 0.00, 0.01) - bond ( -0.265, 0.213, -1.387) ( -0.265, 0.213, -1.384) ( 0.00, 0.00, 0.25) - angle ( -0.002, -0.794, -0.122) ( -0.001, -0.793, -0.122) ( 0.00, 0.04, 0.00) - strbnd ( 0.104, -0.149, 0.254) ( 0.104, -0.149, 0.254) ( 0.00, 0.00, 0.00) - torsion ( -0.534, -0.473, 0.029) ( -0.534, -0.473, 0.029) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.465, 1.537, 0.914) ( 0.465, 1.537, 0.914) ( 0.00, 0.00, 0.00) - electro ( 0.237, -0.346, 0.332) ( 0.237, -0.346, 0.332) ( 0.00, 0.00, 0.00) -42 ( 0.013, 0.008, -0.041) ( 0.014, 0.009, -0.038) ( 0.00, 0.00, 0.01) - bond ( -1.424, -0.121, 4.422) ( -1.424, -0.120, 4.425) ( 0.03, 0.00, 0.07) - angle ( 0.750, -1.072, 0.212) ( 0.750, -1.071, 0.212) ( 0.02, 0.08, 0.00) - strbnd ( 0.500, -0.190, -1.471) ( 0.500, -0.190, -1.471) ( 0.00, 0.00, 0.00) - torsion ( -0.246, 0.662, -0.061) ( -0.246, 0.662, -0.061) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.074, 0.895, -1.822) ( -0.074, 0.895, -1.822) ( 0.00, 0.00, 0.00) - electro ( 0.507, -0.167, -1.321) ( 0.507, -0.167, -1.321) ( 0.00, 0.00, 0.00) -ok 24 # gradients -ok 25 # energy ----------------------------------------------------------------------------------------- - - VALIDATE GRADIENTS : /Volumes/Home/ghutchis/Desktop/UFF/clopidogrel.gpr - - -ATOM IDX NUMERICAL GRADIENT ANALYTICAL GRADIENT REL. ERROR (%) ----------------------------------------------------------------------------------------- - 1 ( 0.094, -0.054, 0.252) ( 0.101, -0.049, 0.257) ( 0.07, 0.03, 0.12) - bond ( 0.405, 3.441, 0.242) ( 0.412, 3.445, 0.242) ( 0.28, 0.13, 0.00) - angle ( -0.409, 0.650, -0.195) ( -0.408, 0.652, -0.195) ( 0.06, 0.11, 0.00) - strbnd ( -0.322, -4.041, -0.254) ( -0.322, -4.042, -0.254) ( 0.01, 0.03, 0.00) - torsion ( -0.032, -0.018, 0.320) ( -0.032, -0.018, 0.321) ( 0.00, 0.00, 0.03) - oop ( 0.002, 0.001, -0.014) ( 0.001, 0.001, -0.011) ( 0.00, 0.00, 0.01) - vdw ( -0.047, -0.020, -0.019) ( -0.047, -0.020, -0.019) ( 0.00, 0.00, 0.00) - electro ( 0.497, -0.068, 0.172) ( 0.497, -0.068, 0.172) ( 0.00, 0.00, 0.00) - 2 ( -0.202, -0.384, 0.053) ( -0.198, -0.377, 0.070) ( 0.09, 0.28, 0.09) - bond ( 3.541, -2.137, 0.264) ( 3.546, -2.131, 0.265) ( 0.15, 0.30, 0.00) - angle ( 1.746, 1.275, 0.298) ( 1.748, 1.277, 0.298) ( 0.10, 0.14, 0.00) - strbnd ( -2.090, 1.285, -0.146) ( -2.091, 1.285, -0.146) ( 0.05, 0.01, 0.00) - torsion ( 0.033, 0.016, -0.297) ( 0.034, 0.016, -0.296) ( 0.00, 0.00, 0.04) - oop ( 0.010, 0.005, -0.088) ( 0.009, 0.004, -0.072) ( 0.00, 0.00, 0.14) - vdw ( -3.041, -0.539, -0.132) ( -3.041, -0.539, -0.132) ( 0.00, 0.00, 0.00) - electro ( -0.403, -0.288, 0.154) ( -0.403, -0.288, 0.154) ( 0.00, 0.00, 0.00) - 3 ( -0.110, 0.062, 0.058) ( -0.093, 0.078, -0.064) ( 0.18, 0.10, 0.70) - bond ( 10.808, 8.532, 1.851) ( 10.812, 8.538, 1.851) ( 0.04, 0.07, 0.01) - angle ( -1.280, -12.576, -1.628) ( -1.278, -12.574, -1.628) ( 0.16, 0.02, 0.03) - strbnd ( -2.662, -2.231, -0.989) ( -2.662, -2.232, -0.989) ( 0.02, 0.03, 0.01) - torsion ( -0.153, 0.061, 1.120) ( -0.153, 0.061, 1.121) ( 0.00, 0.00, 0.09) - oop ( -0.073, -0.051, 0.782) ( -0.062, -0.043, 0.659) ( 0.08, 0.04, 9.60) - vdw ( -8.513, 7.070, -1.049) ( -8.513, 7.070, -1.049) ( 0.00, 0.00, 0.00) - electro ( 1.764, -0.743, -0.030) ( 1.764, -0.743, -0.030) ( 0.00, 0.00, 0.00) - 4 ( -0.088, -0.102, -0.382) ( -0.110, -0.122, -0.055) ( 0.20, 0.20, 12.48) - bond ( 20.270, -4.350, 1.475) ( 20.275, -4.343, 1.476) ( 0.02, 0.15, 0.01) - angle ( 12.458, 12.739, 3.115) ( 12.460, 12.741, 3.115) ( 0.02, 0.01, 0.01) - strbnd (-17.883, -3.513, -1.809) (-17.884, -3.514, -1.809) ( 0.01, 0.03, 0.00) - torsion ( 0.036, 0.065, -1.684) ( 0.036, 0.065, -1.683) ( 0.00, 0.00, 0.04) - oop ( 0.171, 0.149, -1.871) ( 0.143, 0.122, -1.545) ( 0.48, 0.40, 17.39) - vdw (-12.241, -4.949, 0.142) (-12.241, -4.949, 0.142) ( 0.00, 0.00, 0.00) - electro ( -2.899, -0.244, 0.249) ( -2.899, -0.244, 0.249) ( 0.00, 0.00, 0.00) - 5 ( -0.068, -0.017, -0.125) ( -0.065, -0.011, -0.110) ( 0.02, 0.01, 0.19) - bond ( 1.518, -21.327, -9.249) ( 1.522, -21.323, -9.244) ( 0.25, 0.02, 0.05) - angle ( -8.489, 14.472, 7.087) ( -8.487, 14.475, 7.088) ( 0.02, 0.02, 0.02) - strbnd ( 11.557, 1.653, 2.302) ( 11.556, 1.652, 2.302) ( 0.01, 0.05, 0.02) - torsion ( -0.182, 0.061, -1.411) ( -0.182, 0.061, -1.410) ( 0.00, 0.00, 0.02) - oop ( 0.005, 0.003, -0.040) ( 0.004, 0.002, -0.031) ( 0.00, 0.00, 0.04) - vdw ( -7.969, 3.574, 1.404) ( -7.968, 3.574, 1.404) ( 0.00, 0.00, 0.00) - electro ( 3.491, 1.548, -0.219) ( 3.491, 1.548, -0.219) ( 0.00, 0.00, 0.00) - 6 ( 0.024, -0.167, 0.098) ( 0.036, -0.156, 0.018) ( 0.03, 0.18, 0.79) - bond ( -9.999, -4.566, -1.383) ( -9.996, -4.563, -1.383) ( 0.03, 0.06, 0.00) - angle ( 0.723, -4.226, -0.076) ( 0.723, -4.225, -0.077) ( 0.04, 0.03, 0.00) - strbnd ( 12.551, 6.889, 1.807) ( 12.551, 6.889, 1.807) ( 0.00, 0.01, 0.00) - torsion ( 0.080, 0.020, -0.668) ( 0.080, 0.020, -0.667) ( 0.00, 0.00, 0.01) - oop ( -0.057, -0.045, 0.532) ( -0.048, -0.038, 0.452) ( 0.05, 0.03, 4.28) - vdw ( -3.283, 1.455, -0.244) ( -3.283, 1.455, -0.244) ( 0.00, 0.00, 0.00) - electro ( 0.009, 0.307, 0.130) ( 0.009, 0.307, 0.130) ( 0.00, 0.00, 0.00) - 7 ( -0.002, 0.041, -0.083) ( 0.003, 0.047, -0.081) ( 0.00, 0.02, 0.02) - bond ( 10.203, 5.616, 25.277) ( 10.207, 5.620, 25.278) ( 0.04, 0.07, 0.00) - angle (-14.427, 4.571, -29.699) (-14.425, 4.572, -29.697) ( 0.01, 0.03, 0.01) - strbnd ( 1.147, -1.228, -0.703) ( 1.146, -1.229, -0.703) ( 0.05, 0.04, 0.03) - torsion ( 1.193, -0.605, -0.282) ( 1.193, -0.605, -0.282) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 5.912, 0.367, 4.636) ( 5.912, 0.367, 4.636) ( 0.00, 0.00, 0.00) - electro ( -4.030, -8.679, 0.687) ( -4.030, -8.679, 0.687) ( 0.00, 0.00, 0.00) - 8 ( -0.124, -0.019, -0.296) ( -0.123, -0.017, -0.295) ( 0.01, 0.01, 0.03) - bond ( -0.019, -0.836, 0.410) ( -0.019, -0.833, 0.411) ( 0.00, 0.23, 0.03) - angle ( 4.770, -0.609, -1.012) ( 4.771, -0.609, -1.012) ( 0.01, 0.01, 0.04) - strbnd ( 0.249, 0.128, -1.740) ( 0.249, 0.128, -1.740) ( 0.00, 0.00, 0.00) - torsion ( -0.173, -0.083, -0.176) ( -0.173, -0.083, -0.176) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -4.951, 1.380, 2.222) ( -4.951, 1.380, 2.222) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - 9 ( -0.069, 0.131, -0.224) ( -0.068, 0.132, -0.221) ( 0.01, 0.01, 0.07) - bond ( -0.548, -0.489, -3.470) ( -0.548, -0.489, -3.467) ( 0.01, 0.00, 0.09) - angle ( 2.634, -1.083, -0.264) ( 2.635, -1.082, -0.264) ( 0.02, 0.05, 0.00) - strbnd ( 0.419, -1.396, 0.765) ( 0.419, -1.396, 0.765) ( 0.00, 0.00, 0.00) - torsion ( -0.167, -0.223, 0.058) ( -0.167, -0.223, 0.058) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -2.406, 3.323, 2.687) ( -2.406, 3.323, 2.687) ( 0.00, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -10 ( -0.074, -0.055, -0.182) ( -0.069, -0.050, -0.177) ( 0.04, 0.03, 0.10) - bond (-15.381, 12.089, -12.058) (-15.377, 12.093, -12.053) ( 0.02, 0.04, 0.04) - angle ( 8.484, -11.406, 11.903) ( 8.487, -11.404, 11.904) ( 0.03, 0.02, 0.01) - strbnd ( 4.060, 9.673, 0.443) ( 4.059, 9.672, 0.443) ( 0.02, 0.01, 0.02) - torsion ( 1.330, -0.770, -1.490) ( 1.330, -0.769, -1.490) ( 0.01, 0.00, 0.01) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.699, -11.336, 1.328) ( 1.699, -11.336, 1.328) ( 0.01, 0.00, 0.00) - electro ( -0.266, 1.694, -0.308) ( -0.266, 1.694, -0.308) ( 0.00, 0.00, 0.00) -11 ( 0.037, -0.007, -0.105) ( 0.053, 0.011, -0.240) ( 0.06, 0.01, 1.41) - bond ( 9.639, 15.878, 4.037) ( 9.642, 15.883, 4.041) ( 0.04, 0.03, 0.11) - angle ( -9.172, -2.161, -6.458) ( -9.170, -2.158, -6.456) ( 0.02, 0.11, 0.02) - strbnd ( 1.149, -6.264, -0.982) ( 1.147, -6.265, -0.982) ( 0.10, 0.02, 0.04) - torsion ( -0.350, -0.442, 3.225) ( -0.350, -0.442, 3.225) ( 0.00, 0.00, 0.00) - oop ( -0.054, -0.059, 0.659) ( -0.042, -0.046, 0.518) ( 0.06, 0.07, 9.28) - vdw ( -0.242, -4.058, -0.450) ( -0.242, -4.058, -0.450) ( 0.00, 0.00, 0.00) - electro ( -0.932, -2.902, -0.135) ( -0.932, -2.902, -0.135) ( 0.00, 0.00, 0.00) -12 ( 0.007, 0.058, -0.013) ( 0.009, 0.059, -0.013) ( 0.00, 0.01, 0.00) - bond ( -1.070, 0.929, 0.454) ( -1.069, 0.931, 0.454) ( 0.16, 0.12, 0.01) - angle ( 4.468, 5.608, -0.977) ( 4.468, 5.608, -0.977) ( 0.01, 0.01, 0.05) - strbnd ( 0.788, -0.295, -1.704) ( 0.788, -0.295, -1.704) ( 0.00, 0.00, 0.00) - torsion ( -0.551, -1.028, 0.811) ( -0.551, -1.028, 0.811) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -3.628, -5.157, 1.404) ( -3.628, -5.157, 1.404) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -13 ( -0.120, 0.039, -0.037) ( -0.119, 0.040, -0.033) ( 0.01, 0.00, 0.01) - bond ( -0.328, -0.292, -3.901) ( -0.328, -0.292, -3.897) ( 0.00, 0.00, 0.08) - angle ( -0.446, 1.585, -0.081) ( -0.446, 1.585, -0.081) ( 0.02, 0.04, 0.00) - strbnd ( -0.722, 1.212, 0.784) ( -0.722, 1.212, 0.784) ( 0.00, 0.00, 0.00) - torsion ( -0.435, 1.492, -0.075) ( -0.435, 1.492, -0.075) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.812, -3.957, 3.236) ( 1.812, -3.957, 3.236) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -14 ( 0.067, 0.147, -0.288) ( 0.068, 0.148, -0.285) ( 0.00, 0.01, 0.08) - bond ( -0.175, 1.062, 2.357) ( -0.175, 1.063, 2.360) ( 0.00, 0.05, 0.12) - angle ( -0.080, -0.961, 0.427) ( -0.080, -0.961, 0.427) ( 0.00, 0.04, 0.00) - strbnd ( 0.554, 0.475, -1.094) ( 0.554, 0.475, -1.094) ( 0.00, 0.00, 0.00) - torsion ( -0.550, 1.444, -0.691) ( -0.550, 1.444, -0.691) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.318, -1.873, -1.287) ( 0.318, -1.873, -1.287) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -15 ( 0.046, -0.135, -0.333) ( 0.047, -0.133, -0.331) ( 0.00, 0.03, 0.06) - bond ( 0.373, 1.480, -1.330) ( 0.373, 1.482, -1.328) ( 0.00, 0.12, 0.11) - angle ( -2.004, 0.579, 0.084) ( -2.004, 0.580, 0.085) ( 0.03, 0.01, 0.00) - strbnd ( 0.258, 0.339, 0.948) ( 0.258, 0.339, 0.948) ( 0.00, 0.00, 0.00) - torsion ( 0.462, -0.620, -0.562) ( 0.462, -0.620, -0.562) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.958, -1.914, 0.528) ( 0.958, -1.914, 0.528) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -16 ( -0.222, -0.176, 0.346) ( -0.217, -0.175, 0.343) ( 0.09, 0.02, 0.10) - bond ( 0.758, -0.200, 0.086) ( 0.762, -0.200, 0.086) ( 0.28, 0.01, 0.00) - angle ( 0.078, 0.315, 0.044) ( 0.078, 0.315, 0.044) ( 0.00, 0.02, 0.00) - strbnd ( -0.224, 0.410, -0.006) ( -0.224, 0.410, -0.006) ( 0.00, 0.00, 0.00) - torsion ( -0.053, -0.023, 0.416) ( -0.053, -0.023, 0.416) ( 0.00, 0.00, 0.01) - oop ( -0.002, -0.001, 0.014) ( -0.001, -0.001, 0.011) ( 0.00, 0.00, 0.00) - vdw ( -0.370, -0.087, -0.051) ( -0.370, -0.087, -0.051) ( 0.00, 0.00, 0.00) - electro ( -0.409, -0.590, -0.156) ( -0.409, -0.590, -0.156) ( 0.00, 0.00, 0.00) -17 ( -0.172, -0.001, 0.210) ( -0.170, 0.003, 0.205) ( 0.02, 0.00, 0.11) - bond ( 0.202, -2.402, -0.106) ( 0.202, -2.398, -0.106) ( 0.00, 0.16, 0.00) - angle ( 0.155, 0.010, 0.062) ( 0.156, 0.010, 0.062) ( 0.01, 0.00, 0.00) - strbnd ( 0.312, 1.242, 0.101) ( 0.312, 1.242, 0.101) ( 0.00, 0.00, 0.00) - torsion ( -0.037, -0.018, 0.329) ( -0.037, -0.018, 0.329) ( 0.00, 0.00, 0.01) - oop ( -0.003, -0.001, 0.025) ( -0.002, -0.001, 0.019) ( 0.00, 0.00, 0.01) - vdw ( -0.532, 0.720, -0.009) ( -0.532, 0.720, -0.009) ( 0.00, 0.00, 0.00) - electro ( -0.269, 0.447, -0.192) ( -0.269, 0.447, -0.192) ( 0.00, 0.00, 0.00) -18 ( -0.081, -0.033, -0.057) ( -0.060, -0.053, -0.067) ( 0.17, 0.07, 0.06) - bond ( -6.379, 0.928, -24.889) ( -6.375, 0.931, -24.885) ( 0.06, 0.30, 0.02) - angle ( 9.056, 0.616, 23.534) ( 9.058, 0.619, 23.536) ( 0.02, 0.14, 0.01) - strbnd ( -5.196, -2.586, -0.461) ( -5.197, -2.587, -0.462) ( 0.03, 0.04, 0.02) - torsion ( 1.569, -1.208, 0.648) ( 1.569, -1.208, 0.648) ( 0.00, 0.01, 0.00) - oop ( -0.120, 0.144, 0.106) ( -0.104, 0.120, 0.090) ( 0.19, 0.35, 0.17) - vdw ( 1.409, 4.724, -3.655) ( 1.409, 4.724, -3.655) ( 0.01, 0.00, 0.00) - electro ( -0.420, -2.651, 4.661) ( -0.420, -2.651, 4.661) ( 0.00, 0.00, 0.00) -19 ( -0.058, 0.004, 0.349) ( -0.047, 0.015, 0.354) ( 0.06, 0.00, 0.19) - bond ( -2.284, 1.490, -1.564) ( -2.281, 1.492, -1.560) ( 0.13, 0.13, 0.31) - angle ( -1.097, -5.742, -2.880) ( -1.096, -5.741, -2.878) ( 0.12, 0.02, 0.06) - strbnd ( 3.814, -3.033, 2.137) ( 3.814, -3.033, 2.137) ( 0.01, 0.00, 0.01) - torsion ( 0.420, 0.671, -0.162) ( 0.420, 0.672, -0.162) ( 0.02, 0.04, 0.00) - oop ( -0.056, -0.065, 0.006) ( -0.050, -0.058, 0.005) ( 0.04, 0.05, 0.00) - vdw ( -0.306, 9.504, 2.421) ( -0.306, 9.504, 2.421) ( 0.01, 0.00, 0.00) - electro ( -0.549, -2.822, 0.391) ( -0.549, -2.822, 0.391) ( 0.00, 0.00, 0.00) -20 ( 0.614, 0.560, 0.386) ( 0.502, 0.609, 0.460) ( 6.89, 2.73, 2.86) - bond ( -2.231, -20.883, 8.347) ( -2.227, -20.877, 8.352) ( 0.15, 0.03, 0.06) - angle ( -4.426, 15.205, -3.475) ( -4.426, 15.207, -3.473) ( 0.02, 0.01, 0.05) - strbnd ( -4.771, -2.312, -7.995) ( -4.772, -2.313, -7.996) ( 0.01, 0.04, 0.02) - torsion ( -2.925, 0.824, 1.217) ( -2.924, 0.824, 1.217) ( 0.01, 0.00, 0.00) - oop ( 0.652, -0.226, -0.380) ( 0.536, -0.185, -0.311) ( 7.57, 0.92, 2.60) - vdw ( 7.151, 3.310, 3.612) ( 7.151, 3.310, 3.612) ( 0.00, 0.00, 0.00) - electro ( 7.163, 4.641, -0.940) ( 7.163, 4.641, -0.940) ( 0.00, 0.00, 0.00) -21 ( -0.124, -0.034, 0.051) ( -0.123, -0.033, 0.055) ( 0.01, 0.00, 0.02) - bond ( -0.235, -0.308, -2.219) ( -0.235, -0.308, -2.216) ( 0.00, 0.00, 0.15) - angle ( 4.698, -5.851, 0.315) ( 4.699, -5.850, 0.315) ( 0.01, 0.01, 0.00) - strbnd ( -0.581, -0.336, 1.443) ( -0.581, -0.336, 1.443) ( 0.00, 0.00, 0.00) - torsion ( -1.301, 0.144, 0.118) ( -1.301, 0.144, 0.118) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -2.704, 6.318, 0.395) ( -2.704, 6.318, 0.395) ( 0.01, 0.00, 0.00) - electro ( 0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -22 ( -0.190, -0.210, -0.397) ( -0.195, -0.220, -0.390) ( 0.10, 0.21, 0.27) - bond ( 7.110, -5.000, 16.974) ( 7.113, -4.998, 16.979) ( 0.05, 0.04, 0.03) - angle ( -2.542, 1.862, -6.168) ( -2.541, 1.862, -6.166) ( 0.04, 0.04, 0.03) - strbnd ( -2.998, 2.586, 2.923) ( -2.998, 2.586, 2.923) ( 0.00, 0.00, 0.01) - torsion ( 0.187, 0.206, 0.004) ( 0.187, 0.207, 0.004) ( 0.01, 0.02, 0.00) - oop ( 0.071, 0.090, -0.001) ( 0.060, 0.076, -0.000) ( 0.07, 0.12, 0.00) - vdw ( -3.409, 1.113, -13.213) ( -3.409, 1.113, -13.213) ( 0.00, 0.01, 0.00) - electro ( 1.392, -1.067, -0.917) ( 1.392, -1.067, -0.917) ( 0.00, 0.00, 0.00) -23 ( -0.334, -0.228, 0.485) ( -0.328, -0.223, 0.493) ( 0.22, 0.13, 0.36) - bond ( -4.764, 3.427, 11.494) ( -4.760, 3.429, 11.499) ( 0.07, 0.06, 0.05) - angle ( 1.122, -0.757, 2.811) ( 1.123, -0.756, 2.813) ( 0.09, 0.04, 0.06) - strbnd ( 2.035, -1.610, -1.356) ( 2.035, -1.610, -1.356) ( 0.01, 0.01, 0.01) - torsion ( -0.226, -0.307, 0.011) ( -0.225, -0.307, 0.011) ( 0.01, 0.03, 0.00) - oop ( -0.009, -0.013, -0.000) ( -0.008, -0.010, -0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.387, -0.990, -13.718) ( 1.387, -0.990, -13.718) ( 0.00, 0.00, 0.00) - electro ( 0.120, 0.021, 1.244) ( 0.120, 0.021, 1.244) ( 0.00, 0.00, 0.00) -24 ( 0.020, -0.128, -0.527) ( 0.034, -0.112, -0.520) ( 0.03, 0.20, 0.37) - bond ( -7.605, 5.610, 5.554) ( -7.601, 5.612, 5.560) ( 0.05, 0.04, 0.10) - angle ( -1.737, 1.343, 0.082) ( -1.736, 1.343, 0.083) ( 0.06, 0.05, 0.01) - strbnd ( 0.340, -0.282, -1.073) ( 0.340, -0.282, -1.073) ( 0.00, 0.00, 0.02) - torsion ( 0.141, 0.176, 0.004) ( 0.142, 0.177, 0.004) ( 0.01, 0.01, 0.00) - oop ( -0.055, -0.073, -0.001) ( -0.046, -0.061, -0.001) ( 0.05, 0.09, 0.00) - vdw ( 9.119, -7.021, -4.701) ( 9.119, -7.021, -4.701) ( 0.00, 0.00, 0.00) - electro ( -0.183, 0.118, -0.392) ( -0.183, 0.118, -0.392) ( 0.00, 0.00, 0.00) -25 ( 0.159, 0.213, 0.583) ( 0.143, 0.190, 0.589) ( 0.26, 0.50, 0.38) - bond (-11.078, 8.736, -4.694) (-11.074, 8.738, -4.688) ( 0.03, 0.02, 0.12) - angle ( 1.300, -0.887, -3.803) ( 1.301, -0.886, -3.801) ( 0.08, 0.06, 0.05) - strbnd ( 1.316, -0.991, 0.244) ( 1.316, -0.991, 0.244) ( 0.01, 0.01, 0.00) - torsion ( -0.076, -0.091, 0.002) ( -0.076, -0.090, 0.002) ( 0.00, 0.01, 0.00) - oop ( 0.140, 0.179, 0.005) ( 0.119, 0.152, 0.004) ( 0.30, 0.49, 0.00) - vdw ( 8.950, -6.944, 9.005) ( 8.950, -6.943, 9.005) ( 0.00, 0.00, 0.00) - electro ( -0.393, 0.211, -0.176) ( -0.393, 0.211, -0.176) ( 0.00, 0.00, 0.00) -26 ( 0.084, 0.183, -0.225) ( 0.142, 0.255, -0.217) ( 0.48, 1.32, 0.18) - bond ( -0.944, 0.846, -18.247) ( -0.940, 0.848, -18.243) ( 0.30, 0.17, 0.02) - angle ( 7.126, -5.296, 3.718) ( 7.127, -5.296, 3.720) ( 0.01, 0.01, 0.05) - strbnd ( -7.430, 5.904, 0.945) ( -7.430, 5.904, 0.944) ( 0.00, 0.00, 0.05) - torsion ( -0.866, -1.152, -0.063) ( -0.866, -1.152, -0.063) ( 0.03, 0.06, 0.00) - oop ( -0.313, -0.407, -0.015) ( -0.261, -0.338, -0.012) ( 1.66, 2.81, 0.00) - vdw ( 3.069, -0.873, 13.253) ( 3.069, -0.873, 13.253) ( 0.00, 0.00, 0.00) - electro ( -0.557, 1.161, 0.184) ( -0.557, 1.161, 0.184) ( 0.00, 0.00, 0.00) -27 ( -0.315, -0.428, 0.139) ( -0.314, -0.427, 0.141) ( 0.05, 0.03, 0.03) - bond ( 2.446, -1.770, 2.501) ( 2.447, -1.769, 2.503) ( 0.06, 0.04, 0.06) - angle ( -1.543, 1.181, 2.343) ( -1.543, 1.181, 2.344) ( 0.01, 0.01, 0.02) - strbnd ( -1.339, 0.977, -0.789) ( -1.339, 0.977, -0.789) ( 0.00, 0.00, 0.00) - torsion ( 0.988, 1.336, -0.022) ( 0.988, 1.336, -0.022) ( 0.01, 0.02, 0.00) - oop ( 0.002, 0.003, -0.000) ( 0.002, 0.002, -0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.259, -2.708, -3.410) ( 1.260, -2.708, -3.410) ( 0.00, 0.00, 0.00) - electro ( -2.129, 0.554, -0.484) ( -2.129, 0.554, -0.484) ( 0.00, 0.00, 0.00) -28 ( 0.161, 0.473, -0.074) ( 0.162, 0.473, -0.072) ( 0.01, 0.00, 0.01) - bond ( -1.791, 1.438, -1.751) ( -1.790, 1.439, -1.750) ( 0.08, 0.07, 0.08) - angle ( -0.694, 0.523, 1.139) ( -0.694, 0.523, 1.139) ( 0.01, 0.00, 0.04) - strbnd ( 0.572, -0.470, 0.906) ( 0.572, -0.470, 0.906) ( 0.00, 0.00, 0.00) - torsion ( 0.222, 0.282, 0.005) ( 0.222, 0.283, 0.005) ( 0.00, 0.01, 0.00) - oop ( 0.006, 0.008, 0.000) ( 0.005, 0.007, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 2.510, -1.901, -1.427) ( 2.510, -1.901, -1.427) ( 0.00, 0.00, 0.00) - electro ( -0.665, 0.593, 1.054) ( -0.665, 0.593, 1.054) ( 0.00, 0.00, 0.00) -29 ( 0.385, 0.558, 0.067) ( 0.367, 0.535, 0.068) ( 0.68, 1.30, 0.01) - bond ( 0.302, -0.086, -3.852) ( 0.302, -0.086, -3.850) ( 0.00, 0.00, 0.06) - angle ( -6.191, 4.765, -0.593) ( -6.191, 4.765, -0.593) ( 0.00, 0.00, 0.00) - strbnd ( 0.076, 0.015, -2.804) ( 0.076, 0.015, -2.804) ( 0.00, 0.00, 0.00) - torsion ( 0.648, 0.848, 0.032) ( 0.648, 0.848, 0.032) ( 0.00, 0.01, 0.00) - oop ( 0.111, 0.143, 0.005) ( 0.093, 0.120, 0.005) ( 0.20, 0.34, 0.00) - vdw ( 5.741, -5.031, 8.170) ( 5.741, -5.031, 8.171) ( 0.00, 0.00, 0.00) - electro ( -0.302, -0.096, -0.891) ( -0.302, -0.096, -0.891) ( 0.00, 0.00, 0.00) -30 ( -0.388, -0.464, -0.137) ( -0.390, -0.467, -0.134) ( 0.06, 0.11, 0.05) - bond ( -0.285, 0.192, 2.526) ( -0.284, 0.192, 2.529) ( 0.00, 0.00, 0.15) - angle ( 0.191, -0.141, 0.032) ( 0.191, -0.141, 0.032) ( 0.01, 0.00, 0.00) - strbnd ( -0.092, 0.073, -0.831) ( -0.092, 0.073, -0.831) ( 0.00, 0.00, 0.00) - torsion ( -0.351, -0.466, -0.004) ( -0.351, -0.466, -0.004) ( 0.00, 0.01, 0.00) - oop ( 0.013, 0.017, 0.000) ( 0.011, 0.014, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.124, -0.078, -0.755) ( 0.124, -0.078, -0.755) ( 0.00, 0.00, 0.00) - electro ( 0.011, -0.061, -1.105) ( 0.011, -0.061, -1.105) ( 0.00, 0.00, 0.00) -31 ( -0.193, 0.021, 0.101) ( -0.196, 0.016, 0.102) ( 0.05, 0.01, 0.01) - bond ( -1.807, 1.366, 0.917) ( -1.805, 1.368, 0.917) ( 0.11, 0.09, 0.05) - angle ( 0.005, 0.002, 0.007) ( 0.005, 0.002, 0.008) ( 0.00, 0.00, 0.00) - strbnd ( 0.452, -0.351, -0.140) ( 0.452, -0.351, -0.140) ( 0.00, 0.00, 0.00) - torsion ( -0.111, -0.144, -0.004) ( -0.110, -0.143, -0.004) ( 0.00, 0.00, 0.00) - oop ( 0.028, 0.036, 0.000) ( 0.023, 0.030, 0.000) ( 0.01, 0.02, 0.00) - vdw ( 0.558, -0.417, -0.304) ( 0.558, -0.417, -0.304) ( 0.00, 0.00, 0.00) - electro ( 0.682, -0.472, -0.376) ( 0.682, -0.472, -0.376) ( 0.00, 0.00, 0.00) -32 ( -0.425, -0.505, -0.048) ( -0.365, -0.520, -0.079) ( 2.55, 0.73, 0.15) - bond ( -5.280, -7.572, -4.556) ( -5.277, -7.567, -4.554) ( 0.05, 0.06, 0.04) - angle ( -0.110, 0.279, -0.337) ( -0.110, 0.279, -0.337) ( 0.00, 0.01, 0.02) - strbnd ( 1.293, 1.229, 1.466) ( 1.293, 1.229, 1.466) ( 0.00, 0.01, 0.01) - torsion ( 1.739, -0.595, -1.027) ( 1.739, -0.595, -1.027) ( 0.00, 0.00, 0.00) - oop ( -0.260, 0.090, 0.151) ( -0.202, 0.070, 0.118) ( 1.49, 0.18, 0.50) - vdw ( 4.932, 0.142, 8.178) ( 4.933, 0.142, 8.178) ( 0.00, 0.00, 0.00) - electro ( -2.741, 5.922, -3.924) ( -2.741, 5.922, -3.924) ( 0.00, 0.00, 0.00) -33 ( 0.059, 0.082, -0.083) ( 0.093, 0.076, -0.098) ( 0.20, 0.05, 0.12) - bond ( 4.715, 4.557, 6.062) ( 4.716, 4.560, 6.065) ( 0.02, 0.07, 0.06) - angle ( -7.689, -18.240, -5.025) ( -7.688, -18.238, -5.024) ( 0.01, 0.01, 0.01) - strbnd ( 3.295, -2.419, 7.181) ( 3.295, -2.419, 7.181) ( 0.00, 0.01, 0.00) - torsion ( -1.716, 0.412, 0.834) ( -1.716, 0.412, 0.834) ( 0.01, 0.00, 0.00) - oop ( -0.210, 0.072, 0.121) ( -0.178, 0.061, 0.103) ( 0.68, 0.08, 0.23) - vdw ( 1.937, 10.751, -6.247) ( 1.938, 10.752, -6.247) ( 0.00, 0.00, 0.00) - electro ( -0.274, 4.948, -3.009) ( -0.274, 4.948, -3.009) ( 0.00, 0.00, 0.00) -34 ( 0.389, 0.093, 0.080) ( 0.395, 0.098, 0.086) ( 0.24, 0.05, 0.05) - bond ( -0.334, -4.761, 2.356) ( -0.329, -4.757, 2.361) ( 0.15, 0.10, 0.19) - angle ( 0.189, 3.946, 0.226) ( 0.190, 3.948, 0.228) ( 0.03, 0.05, 0.04) - strbnd ( 0.552, 0.973, 0.402) ( 0.551, 0.972, 0.402) ( 0.02, 0.16, 0.02) - torsion ( 1.469, -0.111, -0.152) ( 1.469, -0.111, -0.152) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -3.779, 1.527, -7.078) ( -3.779, 1.527, -7.078) ( 0.00, 0.00, 0.00) - electro ( 2.292, -1.482, 4.326) ( 2.292, -1.482, 4.326) ( 0.00, 0.00, 0.00) -35 ( 0.303, 0.212, 0.053) ( 0.304, 0.213, 0.055) ( 0.04, 0.01, 0.01) - bond ( 0.249, 0.013, 0.448) ( 0.250, 0.013, 0.451) ( 0.02, 0.00, 0.12) - angle ( 0.291, 0.661, -0.181) ( 0.291, 0.662, -0.181) ( 0.01, 0.04, 0.00) - strbnd ( -0.215, -0.451, -0.159) ( -0.215, -0.451, -0.159) ( 0.00, 0.00, 0.00) - torsion ( 0.017, -0.004, -0.009) ( 0.017, -0.004, -0.009) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.039, -0.007, -0.046) ( -0.039, -0.007, -0.046) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -36 ( 0.432, 0.172, 0.118) ( 0.434, 0.174, 0.120) ( 0.05, 0.03, 0.02) - bond ( 0.425, -0.592, -0.547) ( 0.425, -0.590, -0.545) ( 0.03, 0.08, 0.07) - angle ( 1.840, -0.935, 2.446) ( 1.841, -0.935, 2.446) ( 0.02, 0.03, 0.01) - strbnd ( 0.155, -0.679, -0.026) ( 0.155, -0.679, -0.026) ( 0.00, 0.00, 0.00) - torsion ( -0.272, -0.056, -0.151) ( -0.272, -0.056, -0.151) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -1.715, 2.434, -1.604) ( -1.715, 2.434, -1.604) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -37 ( 0.355, -0.026, 0.062) ( 0.358, -0.025, 0.062) ( 0.11, 0.00, 0.00) - bond ( -0.517, -0.155, 0.092) ( -0.514, -0.155, 0.092) ( 0.16, 0.00, 0.00) - angle ( 0.968, -1.352, 3.151) ( 0.969, -1.351, 3.152) ( 0.01, 0.04, 0.01) - strbnd ( -0.412, -0.566, 0.270) ( -0.412, -0.566, 0.270) ( 0.00, 0.00, 0.00) - torsion ( -0.011, -0.098, -0.229) ( -0.011, -0.098, -0.229) ( 0.00, 0.00, 0.00) - oop ( -0.000, 0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.326, 2.145, -3.222) ( 0.326, 2.145, -3.222) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -ok 26 # gradients -ok 27 # energy ----------------------------------------------------------------------------------------- - - VALIDATE GRADIENTS : /Volumes/Home/ghutchis/Desktop/UFF/esomeprazole.gpr - - -ATOM IDX NUMERICAL GRADIENT ANALYTICAL GRADIENT REL. ERROR (%) ----------------------------------------------------------------------------------------- - 1 ( -0.595, 0.676, -0.223) ( -0.647, 0.628, 0.039) ( 3.09, 3.19, 5.85) - bond ( 7.276, 5.385, 2.590) ( 7.281, 5.390, 2.590) ( 0.07, 0.10, 0.02) - angle ( 4.901, -5.978, 0.229) ( 4.902, -5.976, 0.230) ( 0.04, 0.03, 0.01) - strbnd ( -0.020, -1.711, -0.647) ( -0.020, -1.711, -0.647) ( 0.00, 0.01, 0.00) - torsion ( -0.151, -0.425, 0.365) ( -0.151, -0.425, 0.366) ( 0.00, 0.00, 0.03) - oop ( 0.345, 0.325, -1.540) ( 0.287, 0.270, -1.280) ( 2.03, 1.76, 16.87) - vdw (-14.890, 2.733, -1.371) (-14.889, 2.733, -1.371) ( 0.00, 0.00, 0.00) - electro ( 1.944, 0.348, 0.151) ( 1.944, 0.348, 0.151) ( 0.00, 0.00, 0.00) - 2 ( 0.243, -0.582, 0.489) ( 0.380, -0.465, -0.033) ( 3.33, 6.81, 25.52) - bond ( 8.112, -21.040, -1.715) ( 8.117, -21.034, -1.714) ( 0.06, 0.03, 0.04) - angle ( -1.169, 7.194, -15.182) ( -1.167, 7.196, -15.182) ( 0.15, 0.03, 0.00) - strbnd ( -2.863, 15.068, 3.232) ( -2.863, 15.068, 3.232) ( 0.01, 0.01, 0.00) - torsion ( -0.342, -0.574, 3.648) ( -0.342, -0.574, 3.649) ( 0.00, 0.00, 0.03) - oop ( -0.793, -0.680, 3.202) ( -0.663, -0.570, 2.678) (10.36, 7.47, 16.36) - vdw ( -2.909, 0.463, 7.531) ( -2.909, 0.463, 7.531) ( 0.00, 0.01, 0.00) - electro ( 0.206, -1.014, -0.227) ( 0.206, -1.014, -0.227) ( 0.00, 0.00, 0.00) - 3 ( -0.763, 1.187, -0.035) ( -0.848, 1.119, 0.325) ( 6.49, 5.73, 1.25) - bond ( -9.190, -3.608, -3.894) ( -9.185, -3.603, -3.893) ( 0.05, 0.14, 0.02) - angle ( -1.891, 2.042, 2.324) ( -1.889, 2.043, 2.324) ( 0.09, 0.09, 0.02) - strbnd ( 1.681, -6.510, -1.289) ( 1.680, -6.510, -1.289) ( 0.02, 0.00, 0.00) - torsion ( 0.497, 0.356, -1.699) ( 0.498, 0.356, -1.698) ( 0.00, 0.00, 0.05) - oop ( 0.546, 0.446, -2.107) ( 0.455, 0.371, -1.749) ( 5.00, 3.33, 16.96) - vdw ( 9.870, 8.310, 7.295) ( 9.870, 8.311, 7.295) ( 0.00, 0.00, 0.00) - electro ( -2.277, 0.151, -0.665) ( -2.277, 0.151, -0.665) ( 0.00, 0.00, 0.00) - 4 ( 1.476, -1.408, -0.324) ( 1.484, -1.398, -0.333) ( 0.57, 0.66, 0.29) - bond ( -9.024, 1.819, -2.154) ( -9.020, 1.825, -2.154) ( 0.05, 0.29, 0.03) - angle ( -3.381, -7.942, -3.027) ( -3.379, -7.940, -3.027) ( 0.06, 0.02, 0.02) - strbnd ( 0.700, 12.247, 3.116) ( 0.700, 12.246, 3.116) ( 0.01, 0.00, 0.00) - torsion ( 0.035, 0.371, 0.858) ( 0.035, 0.371, 0.859) ( 0.00, 0.00, 0.07) - oop ( -0.017, -0.017, 0.081) ( -0.015, -0.014, 0.070) ( 0.00, 0.00, 0.09) - vdw ( 11.765, -8.172, 0.917) ( 11.765, -8.172, 0.917) ( 0.00, 0.00, 0.00) - electro ( 1.398, 0.286, -0.115) ( 1.398, 0.286, -0.115) ( 0.00, 0.00, 0.00) - 5 ( -7.232, 4.097, 0.766) ( -7.223, 4.103, 0.756) ( 0.13, 0.16, 0.75) - bond ( 0.599, 18.391, 5.068) ( 0.604, 18.393, 5.069) ( 0.30, 0.01, 0.01) - angle ( -2.567, -4.844, -1.977) ( -2.566, -4.842, -1.977) ( 0.01, 0.04, 0.00) - strbnd ( 0.126, -3.607, -0.716) ( 0.126, -3.607, -0.716) ( 0.01, 0.00, 0.01) - torsion ( -0.412, -0.447, 1.649) ( -0.412, -0.447, 1.650) ( 0.00, 0.00, 0.04) - oop ( -0.023, -0.020, 0.080) ( -0.020, -0.017, 0.069) ( 0.01, 0.01, 0.09) - vdw ( -3.582, -7.643, -2.794) ( -3.582, -7.643, -2.794) ( 0.00, 0.00, 0.00) - electro ( -1.373, 2.267, -0.544) ( -1.373, 2.267, -0.544) ( 0.00, 0.00, 0.00) - 6 ( 1.194, -0.710, -0.021) ( 1.214, -0.689, -0.081) ( 1.75, 1.54, 0.13) - bond ( 10.729, -1.010, 2.254) ( 10.734, -1.004, 2.255) ( 0.05, 0.56, 0.03) - angle ( 1.143, 3.497, 1.367) ( 1.144, 3.499, 1.367) ( 0.15, 0.05, 0.02) - strbnd ( -2.517, 7.619, 1.196) ( -2.517, 7.618, 1.196) ( 0.00, 0.01, 0.00) - torsion ( 0.159, 0.163, -0.520) ( 0.159, 0.163, -0.519) ( 0.00, 0.00, 0.05) - oop ( -0.086, -0.090, 0.386) ( -0.072, -0.076, 0.324) ( 0.12, 0.13, 2.38) - vdw ( -7.659, -11.450, -4.951) ( -7.659, -11.450, -4.951) ( 0.00, 0.00, 0.00) - electro ( -0.575, 0.560, 0.247) ( -0.575, 0.560, 0.247) ( 0.00, 0.00, 0.00) - 7 ( 0.327, -3.127, -0.353) ( 0.337, -3.117, -0.367) ( 0.32, 0.34, 0.51) - bond ( -9.535, 2.023, 0.064) ( -9.531, 2.028, 0.068) ( 0.04, 0.21, 0.02) - angle ( 7.090, 1.853, 9.392) ( 7.092, 1.855, 9.394) ( 0.03, 0.11, 0.02) - strbnd ( 2.802, 2.634, -5.055) ( 2.801, 2.634, -5.056) ( 0.04, 0.01, 0.03) - torsion ( -1.902, -1.148, -3.686) ( -1.902, -1.148, -3.686) ( 0.00, 0.00, 0.00) - oop ( -0.031, -0.029, 0.121) ( -0.026, -0.025, 0.103) ( 0.02, 0.01, 0.23) - vdw ( 0.111, -4.681, -1.119) ( 0.111, -4.681, -1.119) ( 0.00, 0.00, 0.00) - electro ( 1.794, -3.780, -0.070) ( 1.794, -3.780, -0.070) ( 0.00, 0.00, 0.00) - 8 ( -0.966, 1.382, 0.070) ( -0.996, 1.356, 0.203) ( 2.96, 1.82, 0.93) - bond ( 1.366, 7.925, -6.059) ( 1.366, 7.930, -6.057) ( 0.03, 0.06, 0.04) - angle ( -4.971, 2.924, 18.703) ( -4.970, 2.924, 18.704) ( 0.02, 0.01, 0.00) - strbnd ( 6.002, -13.364, -10.233) ( 6.002, -13.364, -10.234) ( 0.00, 0.00, 0.00) - torsion ( -1.754, -0.117, -1.236) ( -1.754, -0.117, -1.236) ( 0.00, 0.00, 0.01) - oop ( 0.204, 0.195, -0.836) ( 0.172, 0.164, -0.706) ( 0.66, 0.59, 10.89) - vdw ( -1.863, 4.959, -0.269) ( -1.863, 4.959, -0.269) ( 0.01, 0.00, 0.00) - electro ( 0.051, -1.139, 0.000) ( 0.051, -1.139, 0.000) ( 0.00, 0.00, 0.00) - 9 ( 0.472, -1.055, -0.032) ( 0.477, -1.049, -0.027) ( 0.27, 0.54, 0.02) - bond ( -1.279, -5.277, 4.593) ( -1.274, -5.273, 4.598) ( 0.36, 0.08, 0.10) - angle ( 2.902, 2.092, -7.874) ( 2.904, 2.094, -7.872) ( 0.05, 0.09, 0.03) - strbnd ( -1.490, -4.290, 5.538) ( -1.491, -4.290, 5.537) ( 0.03, 0.02, 0.02) - torsion ( 1.310, 0.148, 0.500) ( 1.310, 0.148, 0.500) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -1.133, 6.426, -2.475) ( -1.133, 6.427, -2.475) ( 0.00, 0.00, 0.00) - electro ( 0.161, -0.154, -0.314) ( 0.161, -0.154, -0.314) ( 0.00, 0.00, 0.00) -10 ( 0.385, -1.062, -0.159) ( 0.412, -1.037, -0.241) ( 1.03, 2.28, 1.31) - bond ( -8.551, -5.303, -3.605) ( -8.546, -5.298, -3.601) ( 0.05, 0.08, 0.13) - angle ( 8.575, 4.295, 4.735) ( 8.577, 4.297, 4.737) ( 0.02, 0.04, 0.03) - strbnd ( -3.559, -3.043, -2.147) ( -3.560, -3.043, -2.147) ( 0.03, 0.02, 0.02) - torsion ( 0.442, 0.421, -1.896) ( 0.442, 0.421, -1.895) ( 0.00, 0.00, 0.01) - oop ( -0.113, -0.097, 0.463) ( -0.092, -0.078, 0.375) ( 0.24, 0.18, 4.06) - vdw ( 3.911, 2.676, 2.455) ( 3.911, 2.676, 2.455) ( 0.00, 0.00, 0.00) - electro ( -0.320, -0.012, -0.165) ( -0.320, -0.012, -0.165) ( 0.00, 0.00, 0.00) -11 ( 0.541, -0.368, -0.055) ( 0.555, -0.353, -0.089) ( 0.77, 0.55, 0.19) - bond ( 5.504, -2.491, 1.129) ( 5.508, -2.486, 1.133) ( 0.08, 0.18, 0.40) - angle ( -6.722, 2.765, 0.097) ( -6.721, 2.767, 0.099) ( 0.03, 0.07, 0.01) - strbnd ( 4.737, -1.045, 0.544) ( 4.736, -1.046, 0.544) ( 0.02, 0.05, 0.02) - torsion ( 0.823, 1.626, -1.528) ( 0.823, 1.626, -1.527) ( 0.00, 0.00, 0.01) - oop ( -0.047, -0.047, 0.210) ( -0.038, -0.038, 0.170) ( 0.04, 0.04, 0.84) - vdw ( -4.511, -1.279, -1.089) ( -4.511, -1.278, -1.089) ( 0.00, 0.00, 0.00) - electro ( 0.757, 0.104, 0.581) ( 0.757, 0.104, 0.581) ( 0.00, 0.00, 0.00) -12 ( 0.752, -10.437, 1.848) ( 0.765, -10.435, 1.820) ( 0.95, 0.03, 1.51) - bond ( -2.163, -10.908, 1.525) ( -2.156, -10.902, 1.525) ( 0.33, 0.05, 0.02) - angle ( 7.340, -14.819, 2.943) ( 7.342, -14.817, 2.943) ( 0.03, 0.02, 0.00) - strbnd ( 1.090, 1.959, -0.206) ( 1.090, 1.958, -0.206) ( 0.04, 0.07, 0.00) - torsion ( 0.003, -0.004, -0.043) ( 0.003, -0.003, -0.041) ( 0.00, 0.00, 0.01) - oop ( -0.016, 0.021, 0.139) ( -0.012, 0.017, 0.109) ( 0.01, 0.01, 0.42) - vdw ( -5.550, 14.354, -2.772) ( -5.550, 14.354, -2.772) ( 0.00, 0.00, 0.00) - electro ( 0.047, -1.041, 0.262) ( 0.047, -1.041, 0.262) ( 0.00, 0.00, 0.00) -13 ( 2.757, -5.629, 1.087) ( 2.764, -5.622, 1.091) ( 0.25, 0.13, 0.32) - bond ( -5.590, -19.311, 2.388) ( -5.585, -19.306, 2.388) ( 0.10, 0.03, 0.01) - angle ( -2.512, 1.805, -0.566) ( -2.510, 1.807, -0.566) ( 0.06, 0.10, 0.00) - strbnd ( 3.165, 3.520, -0.196) ( 3.165, 3.520, -0.196) ( 0.01, 0.01, 0.00) - torsion ( 0.011, -0.018, -0.109) ( 0.011, -0.018, -0.108) ( 0.00, 0.00, 0.02) - oop ( -0.000, -0.000, -0.000) ( -0.000, 0.000, 0.002) ( 0.00, 0.00, 0.00) - vdw ( 7.287, 7.764, -0.420) ( 7.287, 7.764, -0.420) ( 0.00, 0.00, 0.00) - electro ( 0.396, 0.611, -0.010) ( 0.396, 0.611, -0.010) ( 0.00, 0.00, 0.00) -14 ( -1.335, -2.141, 0.084) ( -1.328, -2.134, 0.089) ( 0.50, 0.31, 0.04) - bond (-18.782, -2.708, -1.626) (-18.776, -2.703, -1.625) ( 0.03, 0.18, 0.02) - angle ( 1.613, 0.543, 0.108) ( 1.615, 0.545, 0.108) ( 0.10, 0.08, 0.00) - strbnd ( 0.794, 1.342, -0.132) ( 0.794, 1.342, -0.132) ( 0.01, 0.02, 0.00) - torsion ( 0.006, -0.009, -0.062) ( 0.006, -0.009, -0.061) ( 0.00, 0.00, 0.01) - oop ( 0.002, -0.002, -0.016) ( 0.001, -0.002, -0.013) ( 0.00, 0.00, 0.00) - vdw ( 15.838, -1.596, 1.914) ( 15.838, -1.596, 1.914) ( 0.00, 0.00, 0.00) - electro ( -0.806, 0.290, -0.101) ( -0.806, 0.290, -0.101) ( 0.00, 0.00, 0.00) -15 ( 3.031, -0.230, 0.341) ( 3.037, -0.223, 0.340) ( 0.22, 0.15, 0.03) - bond ( -3.294, 18.549, -3.151) ( -3.288, 18.554, -3.151) ( 0.15, 0.03, 0.01) - angle ( 0.378, -2.944, 0.489) ( 0.379, -2.943, 0.489) ( 0.06, 0.05, 0.00) - strbnd ( -1.098, -1.073, 0.051) ( -1.098, -1.073, 0.051) ( 0.02, 0.02, 0.00) - torsion ( 0.011, -0.016, -0.110) ( 0.011, -0.016, -0.109) ( 0.00, 0.00, 0.01) - oop ( -0.002, 0.002, 0.015) ( -0.001, 0.002, 0.012) ( 0.00, 0.00, 0.00) - vdw ( 6.009, -14.658, 2.893) ( 6.009, -14.658, 2.893) ( 0.00, 0.00, 0.00) - electro ( 1.026, -0.090, 0.154) ( 1.026, -0.090, 0.154) ( 0.00, 0.00, 0.00) -16 ( 12.370, 1.930, 0.944) ( 12.375, 1.941, 0.966) ( 0.04, 0.55, 2.13) - bond ( 19.213, 6.717, 1.018) ( 19.218, 6.723, 1.018) ( 0.03, 0.09, 0.03) - angle ( 2.973, 5.082, -0.490) ( 2.974, 5.083, -0.490) ( 0.05, 0.03, 0.00) - strbnd ( -3.945, -1.731, -0.147) ( -3.945, -1.731, -0.147) ( 0.01, 0.02, 0.00) - torsion ( 0.003, -0.013, -0.075) ( 0.003, -0.013, -0.074) ( 0.00, 0.00, 0.01) - oop ( 0.006, -0.010, -0.064) ( 0.004, -0.007, -0.043) ( 0.00, 0.00, 0.13) - vdw ( -5.726, -9.344, 0.835) ( -5.726, -9.344, 0.835) ( 0.00, 0.00, 0.00) - electro ( -0.154, 1.229, -0.132) ( -0.154, 1.229, -0.132) ( 0.00, 0.00, 0.00) -17 (-13.450, 41.014, -7.667) (-13.439, 41.016, -7.711) ( 0.08, 0.00, 0.58) - bond ( 7.284, 9.618, -0.698) ( 7.289, 9.625, -0.697) ( 0.07, 0.07, 0.02) - angle ( -5.871, 33.585, -5.632) ( -5.869, 33.587, -5.631) ( 0.04, 0.01, 0.00) - strbnd ( 1.328, -2.439, 0.465) ( 1.328, -2.439, 0.465) ( 0.05, 0.01, 0.00) - torsion ( 0.017, -0.014, -0.098) ( 0.017, -0.014, -0.097) ( 0.00, 0.00, 0.02) - oop ( -0.021, 0.034, 0.221) ( -0.016, 0.026, 0.174) ( 0.01, 0.02, 1.03) - vdw (-15.787, 1.374, -1.831) (-15.786, 1.374, -1.831) ( 0.00, 0.00, 0.00) - electro ( -0.402, -1.143, -0.094) ( -0.402, -1.143, -0.094) ( 0.00, 0.00, 0.00) -18 ( 44.261, -1.248, 2.232) ( 44.256, -1.222, 2.354) ( 0.01, 2.10, 5.48) - bond ( 18.720, 10.029, 0.469) ( 18.726, 10.037, 0.469) ( 0.03, 0.07, 0.01) - angle ( 2.437, -10.834, 1.649) ( 2.439, -10.831, 1.649) ( 0.09, 0.02, 0.01) - strbnd ( 18.165, 8.848, 0.274) ( 18.163, 8.848, 0.274) ( 0.01, 0.00, 0.00) - torsion ( -0.089, 0.096, 0.587) ( -0.089, 0.096, 0.588) ( 0.00, 0.00, 0.06) - oop ( 0.077, -0.115, -0.815) ( 0.065, -0.099, -0.694) ( 0.10, 0.19, 9.85) - vdw ( 5.264, -9.676, 0.160) ( 5.264, -9.676, 0.160) ( 0.00, 0.00, 0.00) - electro ( -0.312, 0.403, -0.093) ( -0.312, 0.403, -0.093) ( 0.00, 0.00, 0.00) -19 ( 68.488, 18.064, -0.270) ( 68.513, 18.028, -0.566) ( 0.04, 0.20, 8.00) - bond (-11.492, -18.306, 1.768) (-11.486, -18.298, 1.768) ( 0.05, 0.04, 0.01) - angle (101.652, 48.540, 2.493) (101.655, 48.542, 2.493) ( 0.00, 0.00, 0.00) - strbnd (-24.853, -12.078, -0.240) (-24.854, -12.079, -0.240) ( 0.00, 0.01, 0.00) - torsion ( 0.472, -0.098, -2.127) ( 0.472, -0.098, -2.127) ( 0.00, 0.00, 0.03) - oop ( -0.075, 0.149, 1.013) ( -0.056, 0.104, 0.715) ( 0.14, 0.66, 29.40) - vdw ( 3.529, 0.033, -3.379) ( 3.529, 0.033, -3.379) ( 0.00, 0.00, 0.00) - electro ( -0.746, -0.175, 0.203) ( -0.746, -0.175, 0.203) ( 0.00, 0.00, 0.00) -20 (-65.552, 0.344, -2.838) (-65.559, 0.376, -2.670) ( 0.01, 1.10, 5.94) - bond ( 7.165, 11.748, -1.102) ( 7.168, 11.754, -1.101) ( 0.04, 0.05, 0.02) - angle (-70.683, -26.242, -1.391) (-70.681, -26.241, -1.391) ( 0.00, 0.00, 0.02) - strbnd ( -3.515, 15.582, -2.659) ( -3.515, 15.582, -2.659) ( 0.01, 0.00, 0.00) - torsion ( -0.115, 0.289, 1.930) ( -0.115, 0.289, 1.931) ( 0.00, 0.00, 0.03) - oop ( 0.033, -0.067, -0.441) ( 0.022, -0.041, -0.274) ( 0.04, 0.17, 7.41) - vdw ( 0.077, -0.056, -0.476) ( 0.077, -0.056, -0.476) ( 0.00, 0.00, 0.00) - electro ( 1.485, -0.911, 1.301) ( 1.485, -0.911, 1.301) ( 0.00, 0.00, 0.00) -21 (-46.009, -33.491, 1.964) (-46.011, -33.467, 2.085) ( 0.00, 0.07, 6.12) - bond ( 4.977, 6.420, 0.115) ( 4.980, 6.425, 0.117) ( 0.08, 0.09, 0.02) - angle (-47.413, -32.158, -7.694) (-47.411, -32.158, -7.693) ( 0.00, 0.00, 0.01) - strbnd ( 2.563, -7.549, 6.232) ( 2.563, -7.550, 6.232) ( 0.02, 0.00, 0.01) - torsion ( 2.245, 1.464, 5.606) ( 2.245, 1.464, 5.606) ( 0.00, 0.00, 0.00) - oop ( 0.019, -0.040, -0.279) ( 0.012, -0.023, -0.161) ( 0.01, 0.07, 3.29) - vdw ( -3.043, -1.120, -2.528) ( -3.043, -1.120, -2.528) ( 0.01, 0.00, 0.00) - electro ( -5.357, -0.507, 0.512) ( -5.357, -0.507, 0.512) ( 0.00, 0.00, 0.00) -22 ( -3.034, 3.423, -0.273) ( -3.032, 3.427, -0.272) ( 0.09, 0.12, 0.01) - bond ( -4.627, -5.920, -1.055) ( -4.624, -5.916, -1.055) ( 0.05, 0.06, 0.01) - angle ( -1.279, 0.117, 4.947) ( -1.278, 0.117, 4.948) ( 0.03, 0.00, 0.01) - strbnd ( -1.175, -1.676, -0.163) ( -1.175, -1.676, -0.163) ( 0.00, 0.01, 0.00) - torsion ( -0.017, 0.448, -2.440) ( -0.017, 0.448, -2.440) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -5.912, 10.758, -1.469) ( -5.912, 10.758, -1.469) ( 0.00, 0.00, 0.00) - electro ( 9.975, -0.305, -0.094) ( 9.975, -0.305, -0.094) ( 0.00, 0.00, 0.00) -23 ( 1.091, -0.357, -0.060) ( 1.092, -0.357, -0.050) ( 0.01, 0.00, 0.06) - bond ( 1.966, 1.803, 0.870) ( 1.968, 1.804, 0.870) ( 0.09, 0.09, 0.03) - angle ( -1.373, 1.481, 0.033) ( -1.372, 1.481, 0.033) ( 0.03, 0.03, 0.00) - strbnd ( 0.378, -0.636, -0.059) ( 0.378, -0.636, -0.059) ( 0.00, 0.00, 0.00) - torsion ( 0.041, 0.040, -0.176) ( 0.041, 0.040, -0.176) ( 0.00, 0.00, 0.00) - oop ( 0.014, 0.015, -0.064) ( 0.012, 0.013, -0.054) ( 0.00, 0.00, 0.06) - vdw ( 0.864, -2.400, -0.448) ( 0.864, -2.400, -0.448) ( 0.00, 0.00, 0.00) - electro ( -0.799, -0.659, -0.215) ( -0.799, -0.659, -0.215) ( 0.00, 0.00, 0.00) -24 ( -1.132, -0.023, 0.800) ( -1.131, -0.020, 0.801) ( 0.07, 0.01, 0.05) - bond ( 0.429, 2.379, -0.283) ( 0.429, 2.383, -0.283) ( 0.00, 0.13, 0.00) - angle ( 0.284, -0.374, -2.715) ( 0.285, -0.374, -2.714) ( 0.02, 0.00, 0.02) - strbnd ( -0.744, -0.761, 0.185) ( -0.744, -0.761, 0.185) ( 0.00, 0.00, 0.00) - torsion ( -0.625, 0.065, -0.401) ( -0.625, 0.065, -0.401) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.476, -1.332, 4.015) ( -0.476, -1.332, 4.015) ( 0.01, 0.00, 0.00) - electro ( -0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -25 ( -0.216, 0.307, 0.417) ( -0.215, 0.308, 0.419) ( 0.03, 0.03, 0.10) - bond ( -0.012, -0.007, -0.021) ( -0.011, -0.007, -0.018) ( 0.00, 0.00, 0.00) - angle ( -1.034, 6.306, -1.664) ( -1.034, 6.306, -1.664) ( 0.04, 0.01, 0.01) - strbnd ( -0.562, 0.219, 0.095) ( -0.562, 0.219, 0.095) ( 0.00, 0.00, 0.00) - torsion ( -0.037, -1.134, 0.433) ( -0.037, -1.134, 0.433) ( 0.00, 0.00, 0.00) - oop ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.429, -5.077, 1.574) ( 1.429, -5.077, 1.574) ( 0.00, 0.00, 0.00) - electro ( -0.000, 0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -26 ( -0.284, -0.046, -0.073) ( -0.283, -0.045, -0.071) ( 0.02, 0.01, 0.02) - bond ( -0.628, 1.336, 2.092) ( -0.627, 1.337, 2.095) ( 0.01, 0.07, 0.11) - angle ( -0.745, -7.579, 4.614) ( -0.744, -7.579, 4.614) ( 0.03, 0.01, 0.00) - strbnd ( -0.133, -0.439, 0.449) ( -0.133, -0.439, 0.449) ( 0.00, 0.00, 0.00) - torsion ( -0.063, 0.000, -0.019) ( -0.063, 0.000, -0.019) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 1.284, 6.636, -7.210) ( 1.284, 6.636, -7.210) ( 0.00, 0.00, 0.00) - electro ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -27 ( -0.055, 0.024, 0.090) ( -0.053, 0.026, 0.091) ( 0.01, 0.00, 0.01) - bond ( 0.526, -0.388, 0.144) ( 0.528, -0.387, 0.144) ( 0.11, 0.04, 0.00) - angle ( 0.050, -0.042, -0.294) ( 0.050, -0.042, -0.294) ( 0.00, 0.00, 0.02) - strbnd ( -0.519, -0.146, 0.412) ( -0.519, -0.147, 0.412) ( 0.00, 0.00, 0.00) - torsion ( 0.024, 0.049, 0.043) ( 0.024, 0.049, 0.043) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, 0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( -0.136, 0.552, -0.214) ( -0.136, 0.552, -0.214) ( 0.00, 0.00, 0.00) - electro ( -0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) -28 ( 0.017, -0.066, -0.165) ( 0.019, -0.065, -0.164) ( 0.00, 0.01, 0.01) - bond ( -0.618, -0.478, -0.203) ( -0.616, -0.477, -0.203) ( 0.12, 0.06, 0.00) - angle ( 0.508, -0.622, -0.082) ( 0.508, -0.622, -0.081) ( 0.01, 0.02, 0.00) - strbnd ( 0.062, -0.250, 0.582) ( 0.062, -0.250, 0.582) ( 0.00, 0.00, 0.00) - torsion ( 0.032, -0.035, -0.016) ( 0.032, -0.035, -0.016) ( 0.00, 0.00, 0.00) - oop ( 0.000, -0.000, -0.000) ( 0.000, 0.000, 0.000) ( 0.00, 0.00, 0.00) - vdw ( 0.032, 1.319, -0.446) ( 0.032, 1.319, -0.446) ( 0.00, 0.00, 0.00) -159/160 Test #152: pytest_sym .......................***Timeout 1500.12 sec +159/160 Test #152: pytest_sym .......................***Timeout 1500.18 sec /build/openbabel-2.4.1+dfsg/scripts/python:/build/openbabel-2.4.1+dfsg/builddir/lib -160/160 Test #159: pybindtest__pybel ................***Timeout 1500.06 sec +160/160 Test #159: pybindtest__pybel ................***Timeout 1500.09 sec /build/openbabel-2.4.1+dfsg/scripts/python:/build/openbabel-2.4.1+dfsg/builddir/lib 97% tests passed, 5 tests failed out of 160 -Total Test time (real) = 1508.47 sec +Total Test time (real) = 1507.61 sec The following tests FAILED: 16 - test_builder_1 (Timeout) @@ -8799,7 +8137,7 @@ Errors while running CTest make[2]: *** [Makefile:76: test] Error 8 make[2]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -dh_auto_test: cd builddir && make -j15 test ARGS\+=-j15 returned exit code 2 +dh_auto_test: cd builddir && make -j16 test ARGS\+=-j16 returned exit code 2 make[1]: [debian/rules:57: override_dh_auto_test] Error 2 (ignored) make[1]: Leaving directory '/build/openbabel-2.4.1+dfsg' create-stamp debian/debhelper-build-stamp @@ -8808,7 +8146,7 @@ dh_testroot -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dh_prep -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dh_auto_install -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir - cd builddir && make -j15 install DESTDIR=/build/openbabel-2.4.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd builddir && make -j16 install DESTDIR=/build/openbabel-2.4.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' /usr/bin/cmake -S/build/openbabel-2.4.1+dfsg -B/build/openbabel-2.4.1+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/openbabel-2.4.1+dfsg/builddir/CMakeFiles /build/openbabel-2.4.1+dfsg/builddir/CMakeFiles/progress.marks @@ -8817,24 +8155,26 @@ make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats/libinchi /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi /build/openbabel-2.4.1+dfsg/builddir/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/CMakeFiles/openbabel.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/libinchi/CMakeFiles/inchi.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build [ 8%] Built target inchi +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/CMakeFiles/openbabel.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 22%] Built target openbabel make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend @@ -8847,13 +8187,12 @@ make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src /build/openbabel-2.4.1+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= @@ -8862,20 +8201,22 @@ make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build @@ -8884,20 +8225,22 @@ make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build +make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build @@ -8907,7 +8250,7 @@ make[3]: Nothing to be done for 'src/CMakeFiles/plugin_fingerprints.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 23%] Built target plugin_fingerprints -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend +make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xtcformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' @@ -8915,10 +8258,10 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/xyzformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/viewmolformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/yasaraformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/yasaraformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/viewmolformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbqtformat.dir/build'. @@ -8927,109 +8270,120 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/pcmodelformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/outformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= [ 23%] Built target xtcformat -make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend -[ 24%] Built target xyzformat make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend -[ 25%] Built target viewmolformat +[ 24%] Built target xyzformat make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend -[ 25%] Built target yasaraformat -[ 26%] Built target pdbqtformat +[ 24%] Built target yasaraformat make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend +[ 25%] Built target viewmolformat make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend -[ 26%] Built target pcmodelformat +[ 25%] Built target pcmodelformat +[ 26%] Built target pdbqtformat +[ 26%] Built target outformat make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend +make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend +make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/CMakeFiles/plugin_forcefields.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawcdx.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/CMakeFiles/plugin_forcefields.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawcdx.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= [ 27%] Built target plugin_forcefields -make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend -[ 27%] Built target chemdrawcdx -make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend +make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_descriptors.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= +[ 27%] Built target chemdrawcdx +make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend [ 29%] Built target plugin_descriptors -make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend +make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/xmlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlreactformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build +[ 30%] Built target xmlformat +make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/xmlformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlreactformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 30%] Built target xmlformat -make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend -[ 31%] Built target cmlreactformat -make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build +[ 31%] Built target cmlreactformat +make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlformat.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 31%] Built target cmlformat -make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend +make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build +[ 31%] Built target cmlformat +make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/outformat.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/opendxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 31%] Built target outformat -make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/rsmiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 31%] Built target opendxformat +make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend +[ 32%] Built target rsmiformat +make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/msmsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/msiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 32%] Built target rsmiformat -make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpqcformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' @@ -9037,483 +8391,472 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpdformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/opendxformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pointcloudformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build +make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= -[ 32%] Built target msiformat -make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmcifformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 33%] Built target msmsformat -make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend -[ 33%] Built target mpqcformat make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend -[ 34%] Built target mpdformat -make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build -[ 34%] Built target opendxformat -make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= +[ 33%] Built target msiformat +make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= +[ 33%] Built target mpqcformat +make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend +[ 34%] Built target mpdformat +make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend +[ 34%] Built target pointcloudformat +make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend +[ 34%] Built target mmcifformat +make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pointcloudformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmcifformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/xedformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build -[ 34%] Built target pointcloudformat -make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend -[ 34%] Built target mmcifformat -make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdffformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= -[ 34%] Built target mdffformat -make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/lpmdformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= +[ 34%] Built target mdffformat +make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend +[ 34%] Built target xedformat +make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build +make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build +[ 35%] Built target lpmdformat +make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build +make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/xedformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/groformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/lpmdformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausszmatformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build -[ 34%] Built target xedformat -make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend -[ 35%] Built target lpmdformat -make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend +make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= +[ 36%] Built target groformat +make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/groformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 36%] Built target groformat -make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend +[ 36%] Built target gausszmatformat +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build +make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausszmatformat.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 36%] Built target gausszmatformat -make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/rxnformat.dir/build'. +make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausscubeformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/daltonformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 36%] Built target rxnformat -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build +make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build [ 36%] Built target gausscubeformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/adfformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= -[ 36%] Built target daltonformat -make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend -[ 36%] Built target adfformat -make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/adfformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/rxnformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/asciiformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/daltonformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 36%] Built target adfformat +make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/crystal09format.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 37%] Built target asciiformat -make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend +make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build +[ 36%] Built target rxnformat +make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/jaguarformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemkinformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 38%] Built target crystal09format -make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build +[ 36%] Built target daltonformat +make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend +[ 37%] Built target crystal09format make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend -[ 38%] Built target chemkinformat +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= +[ 37%] Built target jaguarformat make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend +[ 37%] Built target chemkinformat +make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/jaguarformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/asciiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= -[ 38%] Built target jaguarformat -make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/aoforceformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build +make[3]: Nothing to be done for 'src/formats/CMakeFiles/turbomoleformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/aoforceformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cdxmlformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 38%] Built target aoforceformat +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= +[ 38%] Built target asciiformat make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend -[ 39%] Built target cdxmlformat +[ 38%] Built target aoforceformat make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend +[ 38%] Built target turbomoleformat +make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build +make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/turbomoleformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build -[ 39%] Built target turbomoleformat -make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cdxmlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/abinitformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 40%] Built target abinitformat +[ 39%] Built target cdxmlformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/acesformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/alchemyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build -[ 40%] Built target acesformat +[ 40%] Built target abinitformat +make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/CSRformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 40%] Built target alchemyformat +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= +[ 40%] Built target acesformat make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= -[ 40%] Built target CSRformat -make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend +make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pubchem.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= +[ 41%] Built target pubchem +make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= -[ 41%] Built target pubchem -make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/alchemyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= -[ 41%] Built target pdbformat -make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build +[ 41%] Built target alchemyformat +make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/smilesformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/CSRformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= -[ 41%] Built target smilesformat +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build +[ 41%] Built target CSRformat +make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend +[ 41%] Built target pdbformat make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/painterformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 42%] Built target painterformat -make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/smileyformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/povrayformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= -[ 43%] Built target smileyformat -make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/xsfformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/povrayformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/painterformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/smilesformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/shelxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/smileyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build -[ 44%] Built target povrayformat +[ 42%] Built target povrayformat +make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend +[ 43%] Built target painterformat +make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend +[ 43%] Built target xsfformat make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build -[ 44%] Built target shelxformat +[ 43%] Built target shelxformat make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend +[ 43%] Built target smilesformat +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +[ 44%] Built target smileyformat +make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/xsfformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 44%] Built target xsfformat -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_charges.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build [ 45%] Built target plugin_charges -make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend +make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/posformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/CMakeFiles/plugin_ops.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= -[ 50%] Built target plugin_ops -make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend +make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build +make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build +[ 45%] Built target posformat +make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/CMakeFiles/plugin_ops.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/posformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/lmpdatformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 50%] Built target posformat -make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastsearchformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 50%] Built target lmpdatformat +make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build +[ 50%] Built target plugin_ops make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend -[ 50%] Built target fastsearchformat -make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= +[ 50%] Built target lmpdatformat +make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= +make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/thermoformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastsearchformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build -[ 50%] Built target thermoformat +make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= +[ 50%] Built target fastsearchformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend [ 51%] Built target mdlformat make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/inchiformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/gulpformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build [ 52%] Built target inchiformat make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= -[ 52%] Built target gulpformat -make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmodformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build -[ 52%] Built target mmodformat -make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/thermoformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mol2format.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/gulpformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= -[ 53%] Built target mol2format -make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build +[ 52%] Built target thermoformat +make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend +[ 52%] Built target gulpformat +make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmodformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/MNAformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mol2format.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build -[ 53%] Built target MNAformat -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/nulformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build +make[3]: Nothing to be done for 'src/formats/CMakeFiles/MNAformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/balstformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 53%] Built target nulformat +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/dmolformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 52%] Built target mmodformat +make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend +[ 53%] Built target mol2format +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend +[ 53%] Built target MNAformat make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build +make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build [ 53%] Built target balstformat make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/dmolformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/png2format.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/nulformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= [ 53%] Built target dmolformat make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= -[ 53%] Built target png2format +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= +[ 53%] Built target nulformat make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build +make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/castepformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= -[ 54%] Built target castepformat -make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/png2format.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build +[ 53%] Built target png2format +make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/castepformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 54%] Built target castepformat +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessukformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build +make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build [ 55%] Built target gamessukformat -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend +make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fpsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 56%] Built target fpsformat -make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= +[ 56%] Built target fpsformat +make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' @@ -9521,425 +8864,411 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/unichemformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/APIInterface.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 56%] Built target gamessformat -make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend -[ 57%] Built target unichemformat make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend +[ 57%] Built target unichemformat +make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/molreport.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 57%] Built target APIInterface -make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/stlformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build -[ 58%] Built target molreport make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= -[ 58%] Built target stlformat +[ 58%] Built target molreport make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/titleformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= -[ 58%] Built target titleformat -make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/mopacformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/stlformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= -[ 58%] Built target mopacformat -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/titleformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build +[ 58%] Built target stlformat +make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend +[ 58%] Built target titleformat +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/mopacformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/nwchemformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build -[ 59%] Built target nwchemformat -make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/qchemformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= +[ 58%] Built target mopacformat +make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend +[ 59%] Built target nwchemformat +make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build +[ 59%] Built target qchemformat +make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build -[ 59%] Built target qchemformat -make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastaformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 59%] Built target fastaformat -make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/confabreport.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build +[ 59%] Built target fastaformat +make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/svgformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 59%] Built target svgformat +make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fingerprintformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= -[ 59%] Built target confabreport -make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build -[ 59%] Built target svgformat -make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= [ 59%] Built target fingerprintformat make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/siestaformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/siestaformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/confabreport.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build +make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build [ 60%] Built target siestaformat -make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/reportformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 61%] Built target reportformat +make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build +[ 60%] Built target confabreport make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pngformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 61%] Built target reportformat +make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/vaspformat.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= [ 62%] Built target pngformat -make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pwscfformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 62%] Built target vaspformat make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build -[ 62%] Built target pwscfformat -make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/acrformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/zindoformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/vaspformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pwscfformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= -[ 63%] Built target zindoformat -make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend -[ 64%] Built target acrformat -make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/acrformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/copyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 62%] Built target vaspformat +make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/moldenformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= +[ 62%] Built target pwscfformat +make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build -[ 65%] Built target copyformat -make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/zindoformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 63%] Built target acrformat +make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend +[ 64%] Built target copyformat +make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend +[ 65%] Built target zindoformat +make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build -[ 65%] Built target moldenformat -make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/orcaformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= -[ 66%] Built target orcaformat -make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build +make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/moldenformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/PQSformat.dir/build'. +make[3]: Nothing to be done for 'src/formats/CMakeFiles/orcaformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 66%] Built target PQSformat -make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build +[ 65%] Built target moldenformat +make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend +[ 66%] Built target orcaformat +make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/PQSformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= +[ 66%] Built target PQSformat +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/MCDLformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/freefracformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build +[ 67%] Built target MCDLformat +make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/MCDLformat.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build -[ 67%] Built target MCDLformat -make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend +[ 67%] Built target freefracformat +make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/freefracformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/amberformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/cccformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 67%] Built target freefracformat -make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= [ 68%] Built target amberformat -make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend -[ 68%] Built target cccformat make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/cccformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/bgfformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/boxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build -[ 69%] Built target bgfformat -make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gaussformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/boxformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 70%] Built target gaussformat -make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacheformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacaoformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 70%] Built target boxformat -make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend -[ 71%] Built target cacheformat -make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= -[ 71%] Built target cacaoformat make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fchkformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build +make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/carformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build +make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build +[ 68%] Built target cccformat +make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/pqrformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 69%] Built target bgfformat +make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/chem3dformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 70%] Built target gaussformat +make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend +[ 71%] Built target cacheformat +make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend [ 72%] Built target fchkformat +make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend +[ 72%] Built target boxformat make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend [ 72%] Built target carformat +[ 72%] Built target cacaoformat make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend +[ 72%] Built target pqrformat +make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend +make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/pqrformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= +[ 72%] Built target chem3dformat +make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/chem3dformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= -[ 72%] Built target pqrformat make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= -make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build -[ 72%] Built target chem3dformat -make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawct.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= -[ 73%] Built target chemdrawct -make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend +make[3]: Nothing to be done for 'src/formats/CMakeFiles/hinformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/molproformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/formats /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/formats /build/openbabel-2.4.1+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/tinkerformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build -[ 74%] Built target tinkerformat -make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/textformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/hinformat.dir/build'. +make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build +make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build +make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build +make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build +make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build +make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build +make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 74%] Built target textformat +make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build +make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build +[ 73%] Built target chemdrawct +[ 74%] Built target hinformat +make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend +[ 75%] Built target tinkerformat make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/depend -[ 75%] Built target hinformat make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build +[ 75%] Built target molproformat +make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/molproformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/textformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obchiral.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= +[ 75%] Built target textformat +make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemtoolformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cifformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 75%] Built target molproformat -make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build -[ 76%] Built target cifformat -make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend -[ 76%] Built target chemtoolformat +make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build +[ 75%] Built target chemtoolformat make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= +[ 76%] Built target cifformat +make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/featformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build -[ 76%] Built target featformat -make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/crkformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= -[ 76%] Built target crkformat -make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cssrformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/dlpolyformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 76%] Built target cssrformat -make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhiaimsformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' @@ -9947,210 +9276,219 @@ make[3]: Nothing to be done for 'src/formats/CMakeFiles/exyzformat.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'src/formats/CMakeFiles/ghemicalformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhformat.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'src/formats/CMakeFiles/gromos96format.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/build +[ 76%] Built target featformat +make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build +[ 76%] Built target crkformat +[ 76%] Built target cssrformat [ 77%] Built target dlpolyformat +make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend +make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend [ 78%] Built target fhiaimsformat +make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend [ 79%] Built target exyzformat -make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend +make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend +[ 79%] Built target ghemicalformat +[ 79%] Built target gromos96format +make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend +[ 79%] Built target fhformat +make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend +make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obabel.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/babel.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= -make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/ghemicalformat.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 79%] Built target babel -make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build -make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend -[ 79%] Built target fhformat -make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obabel.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= -[ 79%] Built target ghemicalformat -make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'src/formats/CMakeFiles/gromos96format.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build [ 79%] Built target obabel -make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend +make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= -[ 79%] Built target gromos96format -make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= +make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= +[ 79%] Built target babel +make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obspectrophore.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 79%] Built target obspectrophore -make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend +make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/CMakeFiles/obchiral.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obspectrophore.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obchiral.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 79%] Built target obchiral -make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend +make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build +[ 79%] Built target obspectrophore +make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obrms.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build +[ 79%] Built target obchiral +make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build +make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build -[ 79%] Built target obrms -make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/GUI /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/GUI /build/openbabel-2.4.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obgen.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obrms.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 79%] Built target obgen -make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/tools /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/tools /build/openbabel-2.4.1+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/src/GUI /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/src/GUI /build/openbabel-2.4.1+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= +[ 79%] Built target obrms +make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obprop.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obgen.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obfit.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obconformer.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 80%] Built target obprop +[ 79%] Built target obgen make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obprop.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build -[ 81%] Built target obfit -make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obgrep.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 82%] Built target obconformer -make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obrotamer.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obthermo.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 83%] Built target obgrep -make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= -[ 83%] Built target obrotamer make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/CMakeFiles/obrotamer.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 80%] Built target obfit +make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obenergy.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obthermo.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obrotate.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 81%] Built target obprop +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 82%] Built target obgrep +make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build +make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend +make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obrotate.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obprobe.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= -[ 83%] Built target obenergy -[ 83%] Built target obthermo +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obconformer.dir/build'. +make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 82%] Built target obthermo make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obsym.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 84%] Built target obrotate +[ 82%] Built target obrotamer +[ 82%] Built target obenergy make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obprobe.dir/build'. +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/test /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/test /build/openbabel-2.4.1+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= +[ 83%] Built target obrotate +[ 83%] Built target obprobe +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Nothing to be done for 'tools/CMakeFiles/obminimize.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +cd /build/openbabel-2.4.1+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/openbabel-2.4.1+dfsg /build/openbabel-2.4.1+dfsg/scripts /build/openbabel-2.4.1+dfsg/builddir /build/openbabel-2.4.1+dfsg/builddir/scripts /build/openbabel-2.4.1+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= +[ 84%] Built target obconformer [ 85%] Built target obsym -[ 85%] Built target obprobe make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build +[ 86%] Built target obminimize make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obminimize.dir/build'. +make[3]: Nothing to be done for 'tools/CMakeFiles/obtautomer.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 86%] Built target obminimize make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'tools/CMakeFiles/obtautomer.dir/build'. +make[3]: Nothing to be done for 'test/CMakeFiles/test_inchiwrite.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build [ 86%] Built target obtautomer -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'test/CMakeFiles/test_inchiwrite.dir/build'. -make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' [ 87%] Built target test_inchiwrite make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/roundtrip.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' +[ 87%] Built target roundtrip make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build -[ 87%] Built target roundtrip make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' +make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obdistgen.dir/build'. +make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_perl.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build -[ 87%] Built target obdistgen -make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' -make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_perl.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 87%] Built target bindings_perl +make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build +[ 87%] Built target bindings_perl +[ 87%] Built target obdistgen make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'src/GUI/CMakeFiles/obgui.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_python.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' -[ 87%] Built target obgui [ 88%] Built target bindings_python +[ 88%] Built target obgui make[3]: Entering directory '/build/openbabel-2.4.1+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/test_runner.dir/build'. make[3]: Leaving directory '/build/openbabel-2.4.1+dfsg/builddir' @@ -10556,33 +9894,33 @@ make[1]: Leaving directory '/build/openbabel-2.4.1+dfsg' dh_makeshlibs -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dh_shlibdeps -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libdl.so.2 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libz.so.1 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libgomp.so.1 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libcrypt.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libgomp.so.1 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libdl.so.2 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libcrypt.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libz.so.1 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obprop debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obthermo were not linked against libdl.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obprop debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obthermo were not linked against libz.so.1 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obprop debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obthermo were not linked against libgomp.so.1 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obprop debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obthermo were not linked against libpthread.so.0 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libdl.so.2 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libpthread.so.0 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libchemistry-openbabel-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Chemistry/OpenBabel/OpenBabel.so was not linked against libdl.so.2 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libz.so.1 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libgomp.so.1 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-openbabel/usr/lib/python2.7/dist-packages/_openbabel.x86_64-linux-gnu.so was not linked against libdl.so.2 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libgomp.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libz.so.1 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libpthread.so.0 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel-gui/usr/bin/obgui was not linked against libdl.so.2 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obthermo debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obprop were not linked against libz.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obthermo debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obprop were not linked against libgomp.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obthermo debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obprop were not linked against libpthread.so.0 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/openbabel/usr/bin/obfit debian/openbabel/usr/bin/obchiral debian/openbabel/usr/bin/obsym debian/openbabel/usr/bin/obrotate debian/openbabel/usr/bin/obgrep debian/openbabel/usr/bin/obthermo debian/openbabel/usr/bin/obminimize debian/openbabel/usr/bin/obprobe debian/openbabel/usr/bin/obabel debian/openbabel/usr/bin/obconformer debian/openbabel/usr/bin/obgen debian/openbabel/usr/bin/babel debian/openbabel/usr/bin/obenergy debian/openbabel/usr/bin/obtautomer debian/openbabel/usr/bin/obdistgen debian/openbabel/usr/bin/obrotamer debian/openbabel/usr/bin/obrms debian/openbabel/usr/bin/obspectrophore debian/openbabel/usr/bin/obprop were not linked against libdl.so.2 (they use none of the library's symbols) dh_installdeb -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dh_gencontrol -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dpkg-gencontrol: warning: package python-openbabel: substitution variable ${python:Versions} unused, but is defined dh_md5sums -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir dh_builddeb -O--builddirectory=/build/openbabel-2.4.1\+dfsg/builddir -dpkg-deb: building package 'openbabel' in '../openbabel_2.4.1+dfsg-3_amd64.deb'. +dpkg-deb: building package 'libopenbabel-doc' in '../libopenbabel-doc_2.4.1+dfsg-3_all.deb'. dpkg-deb: building package 'libopenbabel-dev' in '../libopenbabel-dev_2.4.1+dfsg-3_amd64.deb'. +dpkg-deb: building package 'openbabel' in '../openbabel_2.4.1+dfsg-3_amd64.deb'. dpkg-deb: building package 'openbabel-gui' in '../openbabel-gui_2.4.1+dfsg-3_amd64.deb'. +dpkg-deb: building package 'openbabel-dbg' in '../openbabel-dbg_2.4.1+dfsg-3_amd64.deb'. dpkg-deb: building package 'libopenbabel5' in '../libopenbabel5_2.4.1+dfsg-3_amd64.deb'. -dpkg-deb: building package 'libopenbabel-doc' in '../libopenbabel-doc_2.4.1+dfsg-3_all.deb'. dpkg-deb: building package 'libchemistry-openbabel-perl' in '../libchemistry-openbabel-perl_2.4.1+dfsg-3_amd64.deb'. -dpkg-deb: building package 'openbabel-dbg' in '../openbabel-dbg_2.4.1+dfsg-3_amd64.deb'. dpkg-deb: building package 'python-openbabel' in '../python-openbabel_2.4.1+dfsg-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../openbabel_2.4.1+dfsg-3_amd64.changes @@ -10591,12 +9929,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2315527/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1990442 and its subdirectories -I: Current time: Wed Dec 8 03:19:05 -12 2021 -I: pbuilder-time-stamp: 1638976745 +I: removing directory /srv/workspace/pbuilder/2315527 and its subdirectories +I: Current time: Wed Jan 11 12:19:07 +14 2023 +I: pbuilder-time-stamp: 1673389147