Diff of the two buildlogs: -- --- b1/build.log 2021-12-08 15:29:30.672987408 +0000 +++ b2/build.log 2021-12-08 15:48:50.432779839 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 8 03:19:48 -12 2021 -I: pbuilder-time-stamp: 1638976788 +I: Current time: Wed Jan 11 11:52:42 +14 2023 +I: pbuilder-time-stamp: 1673387562 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Wed Jan 23 08:38:06 2019 -12 +gpgv: Signature made Thu Jan 24 10:38:06 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key @@ -29,136 +29,170 @@ dpkg-source: info: applying 0001-Make-xf-invert-vrs-b-check-regression-test-pass-on-3.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2339451/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e6c5fd73497744eb9db1081b2f8dd1a9' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2339451' - PS1='# ' - PS2='> ' + INVOCATION_ID=50ade5104c8b4dd6a37d6eb2a8025288 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3525613 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.RlTfKu89uQ/pbuilderrc_8UTZ --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.RlTfKu89uQ/b1 --logfile b1/build.log plastimatch_1.7.4+dfsg.1-2.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.RlTfKu89uQ/pbuilderrc_HDO4 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.RlTfKu89uQ/b2 --logfile b2/build.log plastimatch_1.7.4+dfsg.1-2.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Nov 7 09:58 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/2339451/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jan 11 11:52 sh -> bash + lrwxrwxrwx 1 root root 4 Dec 11 18:20 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -336,7 +370,7 @@ Get: 114 http://deb.debian.org/debian buster/main amd64 liblapack-dev amd64 3.8.0-2 [2140 kB] Get: 115 http://deb.debian.org/debian buster/main amd64 libsqlite3-dev amd64 3.27.2-3+deb10u1 [787 kB] Get: 116 http://deb.debian.org/debian buster/main amd64 uuid-dev amd64 2.33.1-0.1 [93.6 kB] -Fetched 142 MB in 2s (69.6 MB/s) +Fetched 142 MB in 4s (37.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -829,7 +863,8 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/plastimatch-1.7.4+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../plastimatch_1.7.4+dfsg.1-2_source.changes +hostname: Name or service not known +I: Running cd /build/plastimatch-1.7.4+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../plastimatch_1.7.4+dfsg.1-2_source.changes dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.7.4+dfsg.1-2 dpkg-buildpackage: info: source distribution unstable @@ -1111,7 +1146,7 @@ -- Build files have been written to: /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1' dh_auto_build - cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/plastimatch-1.7.4+dfsg.1 -B/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles/progress.marks @@ -1121,131 +1156,131 @@ make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend +make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= -make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/specfun /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend -Scanning dependencies of target lbfgs -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build +make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress 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directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build +Scanning dependencies of target inih +Scanning dependencies of target nkidecompress make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -Scanning dependencies of target inih +make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 0%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -Scanning dependencies of target nkidecompress -Scanning dependencies of target plmclp +Scanning dependencies of target specfun make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build +[ 0%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c -make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 1%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o -make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 1%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/devillard.dir/wirth.cpp.o -c /build/plastimatch-1.7.4+dfsg.1/libs/devillard/wirth.cpp -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/plastimatch-1.7.4+dfsg.1/libs/specfun/mpbdv.c -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +Scanning dependencies of target plmclp +[ 1%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress/nkidecompress.cxx [ 1%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -Scanning dependencies of target plmsys cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/inih.dir/ini.c.o -c /build/plastimatch-1.7.4+dfsg.1/libs/inih-r29/ini.c +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 1%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o [ 2%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o +Scanning dependencies of target plmsys +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/plastimatch-1.7.4+dfsg.1/libs/inih-r29/INIReader.cpp +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/plastimatch-1.7.4+dfsg.1/libs/specfun/mpbdv.c make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/plastimatch-1.7.4+dfsg.1/libs/inih-r29/INIReader.cpp -[ 2%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress/nkidecompress.cxx +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 2%] Building CXX object src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp/plm_clp.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/dir_list.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/dir_list.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/dlib_threads.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/file_util.cxx -[ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o +[ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o +[ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/logfile.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/option_range.cxx -[ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o +[ 3%] Linking CXX static library ../../libdevillard.a cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/path_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/path_util.cxx -[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o -[ 4%] Linking CXX static library ../../libdevillard.a cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 +[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_endian.cxx +[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_sleep.cxx [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_fwrite.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 -[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o /usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_sleep.cxx +[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o /usr/bin/ranlib ../../libdevillard.a +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_timer.cxx make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target devillard -[ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS 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-Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/plm_timer.cxx [ 5%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/print_and_exit.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/print_and_exit.cxx [ 5%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/string_util.cxx [ 5%] Building C object src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys/delayload_legacy.c -[ 5%] Linking C static library ../../libspecfun.a -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake [ 6%] Linking CXX static library ../../libnkidecompress.a cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake 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static library ../../libspecfun.a +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o +/usr/bin/ranlib ../../libspecfun.a make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 6%] Built target specfun [ 6%] Linking CXX static library ../../libinih.a cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o +/usr/bin/ranlib ../../libinih.a +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 6%] Built target inih /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp/plm_clp.cxx: In member function 'void dlib::Plm_clp::assign_int_4(int*, const string_type&)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp/plm_clp.cxx:132:44: warning: format '%d' expects a matching 'int*' argument [-Wformat=] rc = sscanf (get_string(name).c_str(), "%d %d %d %d", ^~~~~~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp/plm_clp.cxx:132:44: warning: format '%d' expects a matching 'int*' argument [-Wformat=] -[ 6%] Built target lbfgs -/usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o -/usr/bin/ranlib ../../libinih.a +[ 6%] Linking C static library ../../liblbfgs.a +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o +/usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 6%] Built target inih +[ 6%] Built target lbfgs [ 6%] Linking CXX shared library ../../../libplmsys.so cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmsys.so.1.7 -o ../../../libplmsys.so.1.7 CMakeFiles/plmsys.dir/dir_list.cxx.o CMakeFiles/plmsys.dir/dlib_threads.cxx.o CMakeFiles/plmsys.dir/file_util.cxx.o CMakeFiles/plmsys.dir/logfile.cxx.o CMakeFiles/plmsys.dir/option_range.cxx.o CMakeFiles/plmsys.dir/path_util.cxx.o CMakeFiles/plmsys.dir/plm_endian.cxx.o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o CMakeFiles/plmsys.dir/plm_sleep.cxx.o CMakeFiles/plmsys.dir/plm_timer.cxx.o CMakeFiles/plmsys.dir/print_and_exit.cxx.o CMakeFiles/plmsys.dir/string_util.cxx.o CMakeFiles/plmsys.dir/delayload_legacy.c.o -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -ldl -lpthread -lpthread -lnsl -lpng -lz -ljpeg -lblas -llapack -lsqlite3 @@ -1260,17 +1295,20 @@ make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o +[ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o +[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.cxx -[ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx -[ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o +[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_header.cxx -[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_interpolate.cxx -[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_warp.cxx +[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o +[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx +[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1285,42 +1323,24 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx -[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o -[ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/cxt_io.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_io.cxx -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.cxx:9: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o -[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_probe.cxx -[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.cxx +[ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_probe.cxx +[ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o +[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_matrices.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/exchkeys.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, + from /usr/include/ITK-4.12/itkImageFileReader.h:20, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1329,15 +1349,8 @@ from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_header.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, - from /usr/include/ITK-4.12/itkImageFileReader.h:20, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx:10: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1355,24 +1368,13 @@ from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_header.cxx:7: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx:10: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx:10: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/exchkeys.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1388,7 +1390,8 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx:10: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1407,6 +1410,19 @@ #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_header.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1416,10 +1432,13 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkLightProcessObject.h:21, - from /usr/include/ITK-4.12/itkImageIOBase.h:24, - from /usr/include/ITK-4.12/itkImageFileReader.h:24, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_io.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_io.cxx:10: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1436,9 +1455,9 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_io.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_io.cxx:10: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_header.cxx:7: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1449,22 +1468,9 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx:24: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1477,17 +1483,27 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkLightProcessObject.h:21, + from /usr/include/ITK-4.12/itkImageIOBase.h:24, + from /usr/include/ITK-4.12/itkImageFileReader.h:24, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx:24: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/gaussian.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1495,9 +1511,10 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx:24: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1514,8 +1531,9 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1532,9 +1550,10 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dicom_util.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx:24: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1545,8 +1564,8 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.cxx:7: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx:8: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1563,13 +1582,29 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx:8: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/float_pair_list.cxx:7: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/gaussian.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/hnd_io.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o @@ -1587,14 +1622,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 12%] Linking CXX static library libplmclp.a -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 -[ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/interpolate.cxx -/usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o -/usr/bin/ranlib libplmclp.a -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1614,11 +1641,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 12%] Built target plmclp -[ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o +[ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/interpolate.cxx +[ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_bbox.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_bbox.cxx -[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_directions.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkNumericTraits.h:21, from /usr/include/ITK-4.12/itkPoint.h:22, @@ -1627,6 +1653,17 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkPoint.h:22, + from /usr/include/ITK-4.12/itkContinuousIndex.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_bbox.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +[ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_directions.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1643,15 +1680,6 @@ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkPoint.h:22, - from /usr/include/ITK-4.12/itkContinuousIndex.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_bbox.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, from /usr/include/ITK-4.12/itkConceptChecking.h:32, from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, from /usr/include/ITK-4.12/itkAtomicInt.h:38, @@ -1668,7 +1696,7 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o +[ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -1696,7 +1724,7 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o +[ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_accumulate.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -1712,7 +1740,7 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o +[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_cast.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -1744,18 +1772,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1772,31 +1788,15 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx +[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx:5: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1812,21 +1812,21 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx:5: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o +[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx +[ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx -[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx:5: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1836,11 +1836,12 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx:8: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1853,12 +1854,10 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx:5: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1866,7 +1865,7 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -1882,8 +1881,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx:8: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -1900,12 +1898,14 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx +[ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx +[ 15%] Linking CXX static library libplmclp.a +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1913,29 +1913,29 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 +[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx +/usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o +[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +/usr/bin/ranlib libplmclp.a +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1960,12 +1960,15 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 15%] Built target plmclp [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx +[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -1977,6 +1980,30 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -1990,23 +2017,10 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2020,36 +2034,44 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2067,6 +2089,19 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2163,18 +2198,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkIntTypes.h:21, - from /usr/include/ITK-4.12/itkMathDetail.h:31, - from /usr/include/ITK-4.12/itkMath.h:31, - from /usr/include/ITK-4.12/itkUnaryFunctorImageFilter.h:21, - from /usr/include/ITK-4.12/itkCastImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx:8: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2194,17 +2217,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkMathDetail.h:32, - from /usr/include/ITK-4.12/itkMath.h:31, - from /usr/include/ITK-4.12/itkUnaryFunctorImageFilter.h:21, - from /usr/include/ITK-4.12/itkCastImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx:8: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ +[ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_scale.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_scale.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_scale.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2221,6 +2235,16 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkIntTypes.h:21, + from /usr/include/ITK-4.12/itkMathDetail.h:31, + from /usr/include/ITK-4.12/itkMath.h:31, + from /usr/include/ITK-4.12/itkUnaryFunctorImageFilter.h:21, + from /usr/include/ITK-4.12/itkCastImageFilter.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx:8: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2241,6 +2265,17 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkMathDetail.h:32, + from /usr/include/ITK-4.12/itkMath.h:31, + from /usr/include/ITK-4.12/itkUnaryFunctorImageFilter.h:21, + from /usr/include/ITK-4.12/itkCastImageFilter.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx:8: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_stats.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2346,8 +2381,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_volume_header.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2365,6 +2398,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_volume_header.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -2569,26 +2604,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_convert.cxx:5: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx:80:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (line, MAX_LINE, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_header.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2617,6 +2632,22 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_convert.cxx:5: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, from /usr/include/ITK-4.12/itkImageConstIterator.h:21, from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, @@ -2625,6 +2656,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx:80:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (line, MAX_LINE, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/plm_image_set.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image_set.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2693,22 +2728,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_txt(const char*) [with T = Labeled_point]': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (s, 1024, fp); - ~~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Labeled_point]': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (s, 1024, fp); - ~~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_txt(const char*) [with T = Point]': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (s, 1024, fp); - ~~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Point]': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (s, 1024, fp); - ~~~~~~^~~~~~~~~~~~~ [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pointset_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset_warp.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2719,8 +2738,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_image.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2730,6 +2747,24 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_txt(const char*) [with T = Labeled_point]': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (s, 1024, fp); + ~~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Labeled_point]': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (s, 1024, fp); + ~~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_txt(const char*) [with T = Point]': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (s, 1024, fp); + ~~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Point]': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (s, 1024, fp); + ~~~~~~^~~~~~~~~~~~~ +[ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_image.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_image.cxx: In function 'void pfm_load(Proj_image*, const char*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_image.cxx:175:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); @@ -2746,6 +2781,20 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_matrix.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_matrix.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/proj_volume.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_volume.cxx +[ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -2778,22 +2827,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.cxx -[ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rasterize_slice.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/pwlut.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2812,6 +2845,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rasterize_slice.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rasterizer.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -2846,8 +2881,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_volume.cxx: In member function 'void Proj_volume::save_header(const char*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_volume.cxx:299:18: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] fprintf (fp, "num_steps=%d\n", d_ptr->num_steps); @@ -2858,6 +2891,8 @@ d_ptr->image_dim[0], d_ptr->image_dim[1]); ~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/proj_volume.cxx:301:18: warning: format '%d' expects argument of type 'int', but argument 4 has type 'plm_long' {aka 'long int'} [-Wformat=] +[ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_fcsv(const char*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx:81:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); @@ -2872,6 +2907,23 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/ray_trace_uniform.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume.cxx +[ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -2906,25 +2958,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx -[ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx:9: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -2946,6 +2979,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3066,6 +3101,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtss_contour.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -3085,16 +3122,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtss_contour.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtss_roi.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtplan.cxx -[ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtplan_beam.cxx -[ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3127,6 +3158,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtplan_beam.cxx +[ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/segmentation.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/segmentation.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -3331,6 +3366,8 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_convolve.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/vf_convolve.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/vf_jacobian.cxx +[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/vf_stats.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, from /usr/include/ITK-4.12/itkImageFileReader.h:20, @@ -3354,10 +3391,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/vf_stats.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume.cxx +[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_boundary_behavior.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3372,6 +3409,7 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -3392,9 +3430,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_boundary_behavior.cxx -[ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmbase.dir/volume_conv.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_conv.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -3540,6 +3575,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -3559,8 +3596,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3667,6 +3702,35 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:14: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::Transform::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] + printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); + ^~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_load(Xform*, FILE*)': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (buf,1024,fp); + ~~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets(buf,1024,fp); + ~~~~~^~~~~~~~~~~~~ [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xio_demographic.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o @@ -3695,10 +3759,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:14: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::Transform::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] - printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); - ^~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3721,31 +3781,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_load(Xform*, FILE*)': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (buf,1024,fp); - ~~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets(buf,1024,fp); - ~~~~~^~~~~~~~~~~~~ [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xio_patient.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -3830,6 +3865,8 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/xpm.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/xpm.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_file.cxx +[ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_image.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3866,8 +3903,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_image.cxx +[ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3904,8 +3941,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -3971,8 +4006,6 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_module.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rdd.cxx -[ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4037,8 +4070,12 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rtss.cxx +[ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4075,8 +4112,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4151,6 +4186,10 @@ ^~~~~~~ [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study.cxx +[ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx +[ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4183,12 +4222,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx -[ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx -[ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4198,8 +4231,9 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_file.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx:11: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -4218,8 +4252,9 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_file.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx:11: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4232,9 +4267,8 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_file.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx:11: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -4253,12 +4287,13 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/volume_header.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_file.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx:11: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4327,18 +4362,21 @@ make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -[ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/bspline_correspond.cxx -[ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -[ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o +[ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx +[ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o +[ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx -[ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx +[ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dvh.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx +[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/geometry_chooser.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4349,23 +4387,13 @@ from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, from /usr/include/ITK-4.12/itkSubtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx -[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dvh.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/geometry_chooser.cxx +[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o +[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o +[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4376,18 +4404,14 @@ from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, from /usr/include/ITK-4.12/itkSubtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dvh.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx -[ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_boundary.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_adjust.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4400,33 +4424,87 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_adjust.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_distance_map.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.cxx:9: + from /usr/include/ITK-4.12/itkImageConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_adjust.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_distance_map.cxx +[ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_gabor.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_crop.cxx +[ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageSource.h:31, + from /usr/include/ITK-4.12/itkGenerateImageSource.h:22, + from /usr/include/ITK-4.12/itkGaborImageSource.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_gabor.cxx:5: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageSource.h:31, + from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, + from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, + from /usr/include/ITK-4.12/itkExtractImageFilter.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_crop.cxx:5: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx:8: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4437,7 +4515,7 @@ from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_adjust.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx:5: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -4452,23 +4530,16 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx:9: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4488,20 +4559,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_gabor.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageSource.h:31, - from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, - from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, - from /usr/include/ITK-4.12/itkExtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_crop.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4518,42 +4575,10 @@ from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, from /usr/include/ITK-4.12/itkSubtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dvh.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageSource.h:31, - from /usr/include/ITK-4.12/itkGenerateImageSource.h:22, - from /usr/include/ITK-4.12/itkGaborImageSource.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_gabor.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_boundary.cxx:9: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx:9: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4566,7 +4591,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4576,7 +4601,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_boundary.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -4596,10 +4621,20 @@ from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, from /usr/include/ITK-4.12/itkSubtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dvh.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/diff.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4623,20 +4658,6 @@ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkNumericTraitsFixedArrayPixel.h:21, - from /usr/include/ITK-4.12/itkFixedArray.hxx:21, - from /usr/include/ITK-4.12/itkFixedArray.h:277, - from /usr/include/ITK-4.12/itkIndex.h:22, - from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, - from /usr/include/ITK-4.12/itkImageRegionConstIteratorWithIndex.h:21, - from /usr/include/ITK-4.12/itkImageRegionIteratorWithIndex.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx:9: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, from /usr/include/ITK-4.12/itkConceptChecking.h:32, from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, from /usr/include/ITK-4.12/itkAtomicInt.h:38, @@ -4674,6 +4695,55 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.cxx:9: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkNumericTraitsFixedArrayPixel.h:21, + from /usr/include/ITK-4.12/itkFixedArray.hxx:21, + from /usr/include/ITK-4.12/itkFixedArray.h:277, + from /usr/include/ITK-4.12/itkIndex.h:22, + from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, + from /usr/include/ITK-4.12/itkImageRegionConstIteratorWithIndex.h:21, + from /usr/include/ITK-4.12/itkImageRegionIteratorWithIndex.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx:9: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageSource.h:31, + from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, + from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, + from /usr/include/ITK-4.12/itkExtractImageFilter.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_crop.cxx:5: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, @@ -4695,7 +4765,11 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_boundary.cxx:9: + from /usr/include/ITK-4.12/itkImageConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx:5: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4711,7 +4785,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4724,13 +4798,10 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageSource.h:31, - from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, - from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, - from /usr/include/ITK-4.12/itkExtractImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_crop.cxx:5: + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_boundary.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4746,7 +4817,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/image_center.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -4769,42 +4840,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /usr/include/ITK-4.12/itkImageConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /usr/include/ITK-4.12/itkImageConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_mask.cxx:5: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_scale.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_scale.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -4858,8 +4893,6 @@ ^~~~~~~ [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/itk_union.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_union.cxx -[ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/landmark_diff.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4874,7 +4907,10 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/landmark_diff.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/proj_image_filter.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4895,13 +4931,59 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/proj_image_filter.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/plm_series.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/plm_series.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/plm_study.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/plm_study.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/rt_study_warp.cxx +[ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/sift.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx +[ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx +[ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, + from /build/plastimatch-1.7.4+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /usr/include/ITK-4.12/itkImageConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx:5: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vnl/vnl_random.h:7, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkPointSet.h:31, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_pointset.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx:8: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -4932,21 +5014,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/sift.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, - from /build/plastimatch-1.7.4+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -[ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -4956,35 +5023,6 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, - from /build/plastimatch-1.7.4+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx:7: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vnl/vnl_random.h:7, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkPointSet.h:31, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_pointset.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/simplify_points.cxx:8: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, @@ -4993,9 +5031,9 @@ from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/synthetic_mha.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, @@ -5007,14 +5045,11 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /usr/include/ITK-4.12/itkImageConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx:5: + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, + from /build/plastimatch-1.7.4+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/sift.cxx:7: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -5111,8 +5146,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/volume_boundary_type.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5131,6 +5164,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/volume_boundary_type.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/xf_invert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/xf_invert.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -5199,8 +5234,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 52%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ramp_filter.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/threshbox.cxx: In function 'void do_overlap_fraction(Threshbox_parms*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/threshbox.cxx:257:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp1, "%s", tmpbuf); @@ -5214,6 +5247,8 @@ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/threshbox.cxx:267:8: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 52%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/ramp_filter.cxx [ 52%] Linking CXX shared library ../../../libplmutil.so cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmutil.so.1.7 -o ../../../libplmutil.so.1.7 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o 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/usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ljpeg -lpng -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -ldl /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread @@ -5224,8 +5259,8 @@ make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= -make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= @@ -5233,38 +5268,36 @@ make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -Scanning dependencies of target plmdose -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/bowtie_correction.cxx [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o [ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx -[ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o +[ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr_options.cxx -[ 54%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o +[ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/fdk.cxx -[ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o +[ 54%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/fdk_util.cxx -[ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o +Scanning dependencies of target plmdose +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/beam_calc.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx +[ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o +[ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_map.cxx -[ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/bragg_curve.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/compute_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/compute_dose.cxx [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o -[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o +[ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/particle_type.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_beam_model.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5274,15 +5307,20 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/compute_dose.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr.cxx:19: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, +[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, @@ -5291,9 +5329,9 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr.cxx:19: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5304,19 +5342,18 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/compute_dose.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, +[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx +[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_lut.cxx +[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_spot_map.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, @@ -5324,14 +5361,12 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/drr.cxx:19: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_lut.cxx -[ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_spot_map.cxx + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5364,7 +5399,7 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx:11: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -5388,26 +5423,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load(const char*)': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load_xio(const char*)': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] - fgets (linebuf, 128, fp); - ~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5425,7 +5440,7 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx:11: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -5444,6 +5459,26 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load(const char*)': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load_xio(const char*)': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] + fgets (linebuf, 128, fp); + ~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5480,6 +5515,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5501,18 +5538,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -Scanning dependencies of target plmregister -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build -[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline.cxx -[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_parms.cxx -[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5528,6 +5553,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_parms.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5549,6 +5576,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx +[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5563,7 +5594,11 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o +[ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx +Scanning dependencies of target plmregister +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5578,7 +5613,21 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5599,6 +5648,7 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5615,29 +5665,12 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx -[ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +[ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5654,15 +5687,19 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.h:11, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline.cxx +[ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_gm.cxx [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_mi.cxx +[ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_mse.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx: In member function 'int Wed_Parms::set_key_val(const char*, const char*, int)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx:228:30: warning: format '%i' expects argument of type 'int*', but argument 3 has type 'plm_long*' {aka 'long int*'} [-Wformat=] if (sscanf (val, "%i %i", @@ -5670,12 +5707,14 @@ &(this->ires[0]), ~~~~~~~~~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx:228:30: warning: format '%i' expects argument of type 'int*', but argument 4 has type 'plm_long*' {aka 'long int*'} [-Wformat=] -[ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -msse2 -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_mse.cxx [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize_lbfgsb.cxx +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx: In member function 'void Rt_dij::dump(const string&) const': +/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx:51:26: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] + fprintf (fp, "%d %f\n", c->index, c->dose); + ^~~~~~~~~ ~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx: In member function 'bool Beam_calc::load(const char*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx:194:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); @@ -5701,15 +5740,18 @@ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1385:13: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize_liblbfgs.cxx -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx: In member function 'void Rt_dij::dump(const string&) const': -/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx:51:26: warning: format '%d' expects argument of type 'int', but argument 3 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] - fprintf (fp, "%d %f\n", c->index, c->dose); - ^~~~~~~~~ ~~~~~~~~ [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize_nlopt.cxx +[ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx [ 60%] Linking CXX shared library ../../../libplmreconstruct.so cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmreconstruct.so.1.7 -o ../../../libplmreconstruct.so.1.7 CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o CMakeFiles/plmreconstruct.dir/drr.cxx.o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o CMakeFiles/plmreconstruct.dir/fdk.cxx.o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lznz -lniftiio /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3_threads -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lm ../../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -lfftw3f -lfftw3 ../../../libdevillard.a +[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_parms.cxx +[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_score.cxx +[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function 'void Plan_calc::normalize_beam_dose(Beam_calc*)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:424:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); @@ -5723,25 +5765,12 @@ printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:452:20: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_stage.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function 'void Plan_calc::print_verif()': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:71: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] printf("\n i_res: "); for (int i = 0; i < num_beams; i++) {printf("%d %d ** ", d_ptr->beam_storage[i]->get_aperture()->get_dim()[0], d_ptr->beam_storage[i]->get_aperture()->get_dim()[1]);} ^~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:71: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] -[ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx -[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_parms.cxx -[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_score.cxx -[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_stage.cxx -[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_state.cxx -[ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_regularize.cxx -[ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5772,6 +5801,12 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_state.cxx +[ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_regularize.cxx +[ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/bspline_regularize_numeric.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o @@ -5784,8 +5819,20 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/demons_state.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/gpuit_demons.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmreconstruct.so -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/groupwise_parms.cxx +[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/histogram.cxx +[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkMatrixOffsetTransformBase.h:22, + from /usr/include/ITK-4.12/itkAffineTransform.h:21, + from /usr/include/ITK-4.12/itkImageMomentsCalculator.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx:5: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5798,7 +5845,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 64%] Built target plmreconstruct In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5817,20 +5863,18 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o -[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/histogram.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/groupwise_parms.cxx -[ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkMatrixOffsetTransformBase.h:22, +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkPoint.h:22, + from /usr/include/ITK-4.12/itkMatrix.h:21, + from /usr/include/ITK-4.12/itkMatrixOffsetTransformBase.h:23, from /usr/include/ITK-4.12/itkAffineTransform.h:21, from /usr/include/ITK-4.12/itkImageMomentsCalculator.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_demons.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o @@ -5841,18 +5885,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkPoint.h:22, - from /usr/include/ITK-4.12/itkMatrix.h:21, - from /usr/include/ITK-4.12/itkMatrixOffsetTransformBase.h:23, - from /usr/include/ITK-4.12/itkAffineTransform.h:21, - from /usr/include/ITK-4.12/itkImageMomentsCalculator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx:5: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -5872,24 +5904,7 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_demons_util.h:4, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_demons_util.cxx:1: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmreconstruct.so [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -5909,6 +5924,26 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_demons_util.h:4, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_demons_util.cxx:1: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +[ 65%] Built target plmreconstruct In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -5937,6 +5972,19 @@ [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_log_demons.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkArray.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vnl/vnl_vector.h:22, + from /usr/include/ITK-4.12/itkArray.h:28, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, @@ -5956,19 +6004,6 @@ [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkArray.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vnl/vnl_vector.h:22, - from /usr/include/ITK-4.12/itkArray.h:28, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, @@ -5985,10 +6020,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o -[ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_optimizer.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6006,14 +6037,12 @@ from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, - from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: + from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6031,12 +6060,14 @@ from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, - from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_optimizer.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6047,14 +6078,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkCenteredTransformInitializer.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration.cxx:9: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6071,6 +6094,18 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration.cxx +[ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkCenteredTransformInitializer.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/itk_registration.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6149,9 +6184,6 @@ ^~~~~~~ [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/joint_histogram.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/joint_histogram.cxx -[ 67%] Linking CXX shared library ../../../libplmdose.so -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmdose.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmdose.so.1.7 -o ../../../libplmdose.so.1.7 CMakeFiles/plmdose.dir/beam_calc.cxx.o CMakeFiles/plmdose.dir/beam_map.cxx.o CMakeFiles/plmdose.dir/bragg_curve.cxx.o CMakeFiles/plmdose.dir/compute_dose.cxx.o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o CMakeFiles/plmdose.dir/particle_type.cxx.o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o CMakeFiles/plmdose.dir/rt_dij.cxx.o CMakeFiles/plmdose.dir/rt_lut.cxx.o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o CMakeFiles/plmdose.dir/rt_mebs.cxx.o CMakeFiles/plmdose.dir/rt_parms.cxx.o CMakeFiles/plmdose.dir/plan_calc.cxx.o CMakeFiles/plmdose.dir/rt_sigma.cxx.o CMakeFiles/plmdose.dir/wed_parms.cxx.o -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmutil.so.1.7 ../../../libspecfun.a ../../../libplmbase.so.1.7 -ldouble-conversion -lznz -lniftiio /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3_threads -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lm ../../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread ../../../libplmsys.so.1.7 -lpthread /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -lfftw3f -lfftw3 ../../../libdevillard.a [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/landmark_warp.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -6188,12 +6220,17 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 67%] Linking CXX shared library ../../../libplmdose.so +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmdose.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmdose.so.1.7 -o ../../../libplmdose.so.1.7 CMakeFiles/plmdose.dir/beam_calc.cxx.o CMakeFiles/plmdose.dir/beam_map.cxx.o CMakeFiles/plmdose.dir/bragg_curve.cxx.o CMakeFiles/plmdose.dir/compute_dose.cxx.o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o CMakeFiles/plmdose.dir/particle_type.cxx.o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o CMakeFiles/plmdose.dir/rt_dij.cxx.o CMakeFiles/plmdose.dir/rt_lut.cxx.o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o CMakeFiles/plmdose.dir/rt_mebs.cxx.o CMakeFiles/plmdose.dir/rt_parms.cxx.o CMakeFiles/plmdose.dir/plan_calc.cxx.o CMakeFiles/plmdose.dir/rt_sigma.cxx.o CMakeFiles/plmdose.dir/wed_parms.cxx.o -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmutil.so.1.7 ../../../libspecfun.a ../../../libplmbase.so.1.7 -ldouble-conversion -lznz -lniftiio /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3_threads -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lm ../../../libnkidecompress.a /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread ../../../libplmsys.so.1.7 -lpthread /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -lfftw3f -lfftw3 ../../../libdevillard.a [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/metric_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/metric_parms.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/metric_state.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/metric_state.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/process_parms.cxx +[ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_cluster.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6224,11 +6261,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_cluster.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmdose.so -[ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_gauss.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6263,10 +6295,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 69%] Built target plmdose -[ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_wendland.cxx +[ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_gauss.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_cassert.h:5, from /usr/include/ITK-4.12/vnl/vnl_matrix_fixed.h:31, @@ -6288,6 +6318,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/rbf_wendland.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_cassert.h:5, from /usr/include/ITK-4.12/vnl/vnl_matrix_fixed.h:31, @@ -6309,6 +6341,9 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmdose.so +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 69%] Built target plmdose [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -6336,6 +6371,7 @@ ^~~~~~~ [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_data.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_data.cxx +[ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6348,6 +6384,7 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_parms.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6366,10 +6403,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_parms.cxx -[ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_resample.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6404,6 +6437,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_resample.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6442,6 +6477,8 @@ ^~~~~~~ [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/registration_util.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/registration_util.cxx +[ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/shared_parms.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkSize.h:21, from /usr/include/ITK-4.12/itkOffset.h:21, @@ -6465,14 +6502,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/shared_parms.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/similarity_metric_type.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/stage_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/stage_parms.cxx -[ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/translation_grid_search.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6507,6 +6540,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/translation_grid_search.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6620,18 +6655,24 @@ make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o +[ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o +[ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o +[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o +[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel.cxx -[ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o +[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_feature.cxx -[ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_parms.cxx -[ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx -[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o +[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_task.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_thumbnailer.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6660,27 +6701,17 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -[ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -[ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs.cxx -[ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx +[ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_parms.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_seg_weights.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /build/plastimatch-1.7.4+dfsg.1/libs/ransac/ParametersEstimator.h:5, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ +[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_stats.cxx +[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_staple.cxx +[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6701,8 +6732,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_stats.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6723,25 +6752,9 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /build/plastimatch-1.7.4+dfsg.1/libs/ransac/ParametersEstimator.h:5, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_staple.cxx -[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -fopenmp -o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx +[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6772,6 +6785,25 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /build/plastimatch-1.7.4+dfsg.1/libs/ransac/ParametersEstimator.h:5, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6781,12 +6813,9 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /usr/include/ITK-4.12/itkImageSpatialObject.h:21, - from /usr/include/ITK-4.12/itkImageMaskSpatialObject.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/libs/ransac/ParametersEstimator.h:5, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -6799,8 +6828,10 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDirectory.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx:10: + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -6816,16 +6847,20 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ + from /usr/include/ITK-4.12/itkDirectory.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx:10: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -6838,7 +6873,9 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: + from /usr/include/ITK-4.12/itkImageSpatialObject.h:21, + from /usr/include/ITK-4.12/itkImageMaskSpatialObject.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -6854,7 +6891,9 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_staple.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_stats.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -6870,9 +6909,7 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_stats.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_staple.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -6886,7 +6923,7 @@ from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx:16: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx:7: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -6906,24 +6943,10 @@ from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx:16: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx:7: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx -[ 77%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/segment_body.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/segment_body.cxx:5: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -6934,7 +6957,7 @@ from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx:7: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx:16: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -6954,10 +6977,22 @@ from /usr/include/ITK-4.12/itkImageIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx:7: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx:16: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 77%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wreturn-type -std=gnu++11 -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/segment_body.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment/segment_body.cxx:5: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7016,150 +7051,152 @@ [ 77%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/depend -make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/landmark_warp.dir/DependInfo.cmake --color= +make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/depend make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend -make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/drr.dir/DependInfo.cmake --color= -make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= -make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= +make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/fdk.dir/DependInfo.cmake --color= -make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= -make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= +make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend -make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= +make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend +Scanning dependencies of target fdk make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/depend -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= -Scanning dependencies of target fdk -make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/build -Scanning dependencies of target landmark_diff -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= -make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend Scanning dependencies of target drr make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/build +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= +make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend Scanning dependencies of target landmark_warp make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build -[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_main.cxx.o +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +Scanning dependencies of target landmark_diff Scanning dependencies of target shuffle_mha -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/fdk.dir/fdk_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/fdk_main.cxx make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= +make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -Scanning dependencies of target wed -Scanning dependencies of target merge_vfs -make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/build +make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build +make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +Scanning dependencies of target wed +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_main.cxx.o make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build -Scanning dependencies of target dicom_info +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/fdk.dir/fdk_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/fdk_main.cxx make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build +[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_opts.cxx.o +Scanning dependencies of target merge_vfs make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/fdk.dir/fdk_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/fdk_opts.cxx make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build Scanning dependencies of target bragg_curve +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/drr.dir/drr_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/drr.dir/drr_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/drr_main.cxx make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx +Scanning dependencies of target dicom_info +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/drr.dir/drr_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/drr_main.cxx +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build +[ 79%] Building CXX object src/plastimatch/cli/CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o Scanning dependencies of target dicom_uid +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/landmark_warp_main.cxx make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build -Scanning dependencies of target xvi_archive -Scanning dependencies of target check_grad -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build -[ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build +[ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/wed_main.cxx Scanning dependencies of target group_add +[ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/build -[ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -[ 81%] Building CXX object src/plastimatch/cli/CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/wed_main.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/landmark_warp_main.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o +[ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o +Scanning dependencies of target check_grad make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx +make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx +Scanning dependencies of target xvi_archive +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build Scanning dependencies of target compute_distance +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkSize.h:21, - from /usr/include/ITK-4.12/itkOffset.h:21, - from /usr/include/ITK-4.12/itkIndex.h:21, - from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, - from /usr/include/ITK-4.12/itkImageSliceConstIteratorWithIndex.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx:8: + from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, + from /usr/include/ITK-4.12/itkImageFileReader.h:20, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o +[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/group_add.dir/group_add.cxx.o +[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/group_add.dir/group_add.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/group_add.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, - from /usr/include/ITK-4.12/itkImageFileReader.h:20, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx:6: + from /usr/include/ITK-4.12/itkSize.h:21, + from /usr/include/ITK-4.12/itkOffset.h:21, + from /usr/include/ITK-4.12/itkIndex.h:21, + from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, + from /usr/include/ITK-4.12/itkImageSliceConstIteratorWithIndex.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx:8: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o +[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7171,6 +7208,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 82%] Linking CXX executable ../../../landmark_diff +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7185,8 +7224,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 82%] Linking CXX executable ../../../landmark_diff -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7201,27 +7238,6 @@ #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../../landmark_diff -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, - from /usr/include/ITK-4.12/itkImageFileReader.h:20, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx:15: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7234,23 +7250,18 @@ from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkImageFileReader.h:24, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx:15: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkNumericTraitsFixedArrayPixel.h:21, - from /usr/include/ITK-4.12/itkFixedArray.hxx:21, - from /usr/include/ITK-4.12/itkFixedArray.h:277, - from /usr/include/ITK-4.12/itkIndex.h:22, - from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, - from /usr/include/ITK-4.12/itkImageSliceConstIteratorWithIndex.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx:8: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, + from /usr/include/ITK-4.12/itkImageFileReader.h:20, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7288,13 +7299,39 @@ #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ +In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, from /usr/include/ITK-4.12/itkImageFileReader.h:20, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx:15: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkNumericTraitsFixedArrayPixel.h:21, + from /usr/include/ITK-4.12/itkFixedArray.hxx:21, + from /usr/include/ITK-4.12/itkFixedArray.h:277, + from /usr/include/ITK-4.12/itkIndex.h:22, + from /usr/include/ITK-4.12/itkImageConstIteratorWithIndex.h:21, + from /usr/include/ITK-4.12/itkImageSliceConstIteratorWithIndex.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx:8: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7317,14 +7354,10 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/wed_main.cxx:9: + from /usr/include/ITK-4.12/itkLightProcessObject.h:21, + from /usr/include/ITK-4.12/itkImageIOBase.h:24, + from /usr/include/ITK-4.12/itkImageFileReader.h:24, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx:15: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -7340,7 +7373,8 @@ from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkImageFileReader.h:24, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx:6: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -7360,10 +7394,12 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/wed_main.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7383,8 +7419,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7394,27 +7428,17 @@ from /usr/include/ITK-4.12/itkTimeStamp.h:33, from /usr/include/ITK-4.12/itkLightObject.h:23, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkLightProcessObject.h:21, - from /usr/include/ITK-4.12/itkImageIOBase.h:24, - from /usr/include/ITK-4.12/itkImageFileReader.h:24, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx:20: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7422,9 +7446,9 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx:31: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx:20: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -7441,12 +7465,28 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx:31: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx:20: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +Scanning dependencies of target plastimatch +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx:31: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7460,23 +7500,20 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx:20: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study_metadata.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/dcmtk_sro.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx:31: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_opts.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/fdk.dir/fdk_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/fdk_opts.cxx -[ 82%] Linking CXX executable ../../../bragg_curve -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 -Scanning dependencies of target plastimatch -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 82%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_add.cxx +make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= +[ 82%] Linking CXX executable ../../../bragg_curve +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7491,6 +7528,13 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +Scanning dependencies of target bspline +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_main.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bspline.dir/bspline_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bspline_main.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7511,24 +7555,11 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 82%] Linking CXX executable ../../../fdk +[ 83%] Linking CXX executable ../../../fdk cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/fdk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/fdk.dir/fdk_main.cxx.o CMakeFiles/fdk.dir/fdk_opts.cxx.o -o ../../../fdk -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 82%] Built target bragg_curve -make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= -Scanning dependencies of target bspline -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bspline.dir/bspline_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bspline_main.cxx -[ 83%] Building CXX object src/plastimatch/cli/CMakeFiles/drr.dir/drr_opts.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/drr.dir/drr_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/drr_opts.cxx -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Built target landmark_diff +[ 83%] Built target bragg_curve make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= @@ -7538,16 +7569,8 @@ make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/demons.dir/demons_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/demons_main.cxx -[ 83%] Linking CXX executable ../../../dicom_uid -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_opts.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bspline.dir/bspline_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bspline_opts.cxx -[ 83%] Linking CXX executable ../../../drr -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/drr.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/drr.dir/drr_main.cxx.o CMakeFiles/drr.dir/drr_opts.cxx.o -o ../../../drr -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Built target fdk +[ 83%] Built target landmark_diff make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= @@ -7557,28 +7580,56 @@ make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/dlib_train.cxx +[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_opts.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/bspline.dir/bspline_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/bspline_opts.cxx [ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/demons_opts.cxx +[ 83%] Building CXX object src/plastimatch/cli/CMakeFiles/drr.dir/drr_opts.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/drr.dir/drr_opts.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/drr_opts.cxx [ 83%] Linking CXX executable ../../../wed +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/wed.dir/wed_main.cxx.o -o ../../../wed -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +[ 83%] Built target fdk +make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= [ 83%] Linking CXX executable ../../../demons cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../../demons -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +Scanning dependencies of target hnd_to_pfm +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build +make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx [ 83%] Linking CXX executable ../../../bspline cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bspline.dir/link.txt --verbose=1 +[ 83%] Linking CXX executable ../../../dicom_uid +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bspline.dir/bspline_main.cxx.o CMakeFiles/bspline.dir/bspline_opts.cxx.o -o ../../../bspline -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 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/usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +[ 83%] Linking CXX executable ../../../drr +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/drr.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/drr.dir/drr_main.cxx.o CMakeFiles/drr.dir/drr_opts.cxx.o -o ../../../drr -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +[ 83%] Linking CXX executable ../../../hnd_to_pfm +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../../hnd_to_pfm -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 83%] Built target drr -[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/closest_point.cxx -Scanning dependencies of target hnd_to_pfm +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= +Scanning dependencies of target sobp +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 83%] Built target demons +[ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/sobp_main.cxx +[ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/closest_point.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, from /usr/include/ITK-4.12/itkImageFileReader.h:20, @@ -7587,8 +7638,23 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx +[ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_mebs.h:15, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/sobp_main.cxx:9: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7606,35 +7672,11 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 83%] Linking CXX executable ../../../hnd_to_pfm -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../../hnd_to_pfm -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Linking CXX executable ../../../shuffle_mha -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 -[ 83%] Built target dicom_uid -make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -Scanning dependencies of target sobp -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build -make[3]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/sobp_main.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/aperture.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose/rt_mebs.h:15, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/sobp_main.cxx:9: + from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, + from /usr/include/ITK-4.12/itkImageFileReader.h:20, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -7660,12 +7702,29 @@ #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 84%] Built target wed make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkLightProcessObject.h:21, + from /usr/include/ITK-4.12/itkImageIOBase.h:24, + from /usr/include/ITK-4.12/itkImageFileReader.h:24, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ [ 84%] Built target bspline -[ 84%] Built target wed [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -[ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_adjust.cxx +[ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_autolabel_train.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -7701,39 +7760,15 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkImageFileReaderException.h:22, - from /usr/include/ITK-4.12/itkImageFileReader.h:20, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkLightProcessObject.h:21, - from /usr/include/ITK-4.12/itkImageIOBase.h:24, - from /usr/include/ITK-4.12/itkImageFileReader.h:24, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/compute_distance.h:13, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx:6: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 84%] Built target hnd_to_pfm +[ 84%] Linking CXX executable ../../../shuffle_mha +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 84%] Built target dicom_uid [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_autolabel.cxx -[ 85%] Built target demons +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 85%] Built target hnd_to_pfm [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_bbox.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -7761,18 +7796,16 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 85%] Built target shuffle_mha [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_benchmark.cxx -[ 85%] Linking CXX executable ../../../sobp -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../../sobp -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 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/usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl [ 86%] Linking CXX executable ../../../compute_distance cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../../compute_distance -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +[ 86%] Linking CXX executable ../../../sobp +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../../sobp -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 86%] Built target sobp +[ 86%] Built target shuffle_mha [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_boundary.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -7825,6 +7858,24 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 87%] Built target sobp +[ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /usr/include/ITK-4.12/itkImageConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, + from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7845,28 +7896,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 88%] Linking CXX executable ../../../check_grad -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -[ 88%] Linking CXX executable ../../../landmark_warp -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_warp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -o ../../../landmark_warp -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -[ 88%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /usr/include/ITK-4.12/itkImageConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionConstIterator.h:21, - from /usr/include/ITK-4.12/itkImageRegionIterator.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7887,10 +7916,23 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 87%] Linking CXX executable ../../../landmark_warp +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_warp.dir/link.txt --verbose=1 +[ 88%] Linking CXX executable ../../../check_grad +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -o ../../../landmark_warp -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +[ 88%] Linking CXX executable ../../../dicom_info +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl [ 88%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_crop.cxx +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 88%] Built target landmark_warp [ 88%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o +[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7903,8 +7945,28 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 89%] Built target check_grad +In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, + from /usr/include/ITK-4.12/vcl_limits.h:5, + from /usr/include/ITK-4.12/itkNumericTraits.h:51, + from /usr/include/ITK-4.12/itkConceptChecking.h:32, + from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, + from /usr/include/ITK-4.12/itkAtomicInt.h:38, + from /usr/include/ITK-4.12/itkTimeStamp.h:33, + from /usr/include/ITK-4.12/itkLightObject.h:23, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx:6: +/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" + ^~~~~~~ +[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7937,6 +7999,20 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dose.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -7950,24 +8026,11 @@ from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/dice_statistics.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx:6: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx:7: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 89%] Linking CXX executable ../../../dicom_info -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 89%] Built target landmark_warp -[ 89%] Built target check_grad -[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx -[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dose.cxx -[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -7982,18 +8045,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8014,28 +8065,11 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, - from /usr/include/ITK-4.12/vcl_limits.h:5, - from /usr/include/ITK-4.12/itkNumericTraits.h:51, - from /usr/include/ITK-4.12/itkConceptChecking.h:32, - from /usr/include/ITK-4.12/itkAtomicIntDetail.h:39, - from /usr/include/ITK-4.12/itkAtomicInt.h:38, - from /usr/include/ITK-4.12/itkTimeStamp.h:33, - from /usr/include/ITK-4.12/itkLightObject.h:23, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/distance_map.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx:7: -/usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" - ^~~~~~~ -[ 90%] Linking CXX executable ../../../xvi_archive -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -[ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o +[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 89%] Built target dicom_info +[ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_dvh.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, @@ -8067,8 +8101,9 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 91%] Built target dicom_info +[ 91%] Linking CXX executable ../../../xvi_archive +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_filter.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -8105,6 +8140,8 @@ ^~~~~~~ [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_gamma.cxx +[ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_header.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8119,8 +8156,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 91%] Linking CXX executable ../../../merge_vfs -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8141,23 +8176,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -[ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_header.cxx -[ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx:7: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8190,6 +8208,22 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 91%] Built target xvi_archive +[ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8208,28 +8242,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 92%] Built target merge_vfs [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_mabs.cxx -[ 92%] Built target xvi_archive -[ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ -[ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8262,17 +8276,17 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkDataObject.h:31, - from /usr/include/ITK-4.12/itkProcessObject.h:31, - from /usr/include/ITK-4.12/itkImageSource.h:31, - from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, - from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, - from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, - from /usr/include/ITK-4.12/itkMaximumImageFilter.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx:7: + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx:6: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -8294,6 +8308,22 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkDataObject.h:31, + from /usr/include/ITK-4.12/itkProcessObject.h:31, + from /usr/include/ITK-4.12/itkImageSource.h:31, + from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, + from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, + from /usr/include/ITK-4.12/itkBinaryFunctorImageFilter.h:21, + from /usr/include/ITK-4.12/itkMaximumImageFilter.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx:7: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8314,13 +8344,16 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 93%] Linking CXX executable ../../../merge_vfs +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 93%] Built target merge_vfs +[ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx [ 94%] Linking CXX executable ../../../group_add cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/group_add.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/group_add.dir/group_add.cxx.o -o ../../../group_add -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.7 ../../../libplmregister.so.1.7 ../../../libplmreconstruct.so.1.7 ../../../libplmdose.so.1.7 ../../../libplmutil.so.1.7 ../../../libplmbase.so.1.7 ../../../libplmsys.so.1.7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg8.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg12.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libijg16.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcharls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libcmr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmrt.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmseg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmtract.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libdcmtls.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmsr.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmimage.so.14.3.6.4 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.14.3.6.4 -lssl -lcrypto /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmnet.so.14.3.6.4 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmfg.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmiod.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libdcmdata.so.14.3.6.4 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.8 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.8 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 -lm /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm /usr/lib/x86_64-linux-gnu/liboflog.so.14.3.6.4 /usr/lib/x86_64-linux-gnu/libofstd.so.14.3.6.4 -licuuc -licudata -lnsl -lpthread -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -ldl -make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 94%] Built target group_add -[ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_multiply.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -8357,6 +8390,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +make[3]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 94%] Built target group_add [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_probe.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, @@ -8402,6 +8437,8 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8421,10 +8458,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx -[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8455,6 +8488,10 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx +[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8464,7 +8501,7 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -8483,12 +8520,10 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8498,7 +8533,7 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -8517,7 +8552,7 @@ from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image.h:10, from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/plm_image.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -8553,8 +8588,6 @@ ^~~~~~~ [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_stats.cxx -[ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8585,6 +8618,8 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8695,6 +8730,20 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ +[ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_union.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_union.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_union.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8713,22 +8762,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_union.cxx -[ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/itk_union.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_union.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8747,15 +8780,17 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx +[ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx:13: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx:9: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -8771,21 +8806,19 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study.h:9, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx:13: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx:9: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx:13: /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ @@ -8801,7 +8834,9 @@ from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx:9: + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/rt_study.h:9, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx:13: /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ @@ -8815,7 +8850,6 @@ /usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" ^~~~~~~ -[ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8825,6 +8859,7 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ +[ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx: In function 'void do_command_xio_dvh(int, char**)': /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:46:7: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result] @@ -8866,6 +8901,20 @@ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xf_convert.cxx +[ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx +In file included from /usr/include/ITK-4.12/itkMacro.h:42, + from /usr/include/ITK-4.12/itkLightObject.h:21, + from /usr/include/ITK-4.12/itkObject.h:31, + from /usr/include/ITK-4.12/itkRegion.h:31, + from /usr/include/ITK-4.12/itkImageRegion.h:31, + from /usr/include/ITK-4.12/itkImage.h:21, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, + from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx:6: +/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] + #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" + ^~~~~~~ In file included from /usr/include/ITK-4.12/itkMacro.h:42, from /usr/include/ITK-4.12/itkLightObject.h:21, from /usr/include/ITK-4.12/itkObject.h:31, @@ -8898,20 +8947,6 @@ /usr/include/ITK-4.12/vcl_config_compiler.h:21:4: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" [-Wcpp] #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of VXL" ^~~~~~~ -[ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/util -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/segment -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/qt -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base -I/build/plastimatch-1.7.4+dfsg.1/src/plastimatch -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/double-conversion -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-1.7.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-1.7.4+dfsg.1/libs/nSIFT -I/build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-1.7.4+dfsg.1/libs -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac -I/build/plastimatch-1.7.4+dfsg.1/libs/ransac/Common -I/build/plastimatch-1.7.4+dfsg.1/libs/devillard -isystem /usr/include/gdcm-2.8 -isystem /usr/include/ITK-4.12 -g -O2 -ffile-prefix-map=/build/plastimatch-1.7.4+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wreturn-type -std=gnu++11 -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx -In file included from /usr/include/ITK-4.12/itkMacro.h:42, - from /usr/include/ITK-4.12/itkLightObject.h:21, - from /usr/include/ITK-4.12/itkObject.h:31, - from /usr/include/ITK-4.12/itkRegion.h:31, - from /usr/include/ITK-4.12/itkImageRegion.h:31, - from /usr/include/ITK-4.12/itkImage.h:21, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/base/itk_image_load.h:8, - from /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx:6: -/usr/include/ITK-4.12/itkConfigure.h:59:6: warning: #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" [-Wcpp] - #warning "WARNING: The current project is configured to use a C++ standard version older than the C++ standard used for this build of ITK" - ^~~~~~~ In file included from /usr/include/ITK-4.12/vcl_compiler.h:89, from /usr/include/ITK-4.12/vcl_limits.h:5, from /usr/include/ITK-4.12/itkNumericTraits.h:51, @@ -8948,10 +8983,10 @@ debian/rules override_dh_auto_test make[1]: Entering directory '/build/plastimatch-1.7.4+dfsg.1' dh_auto_test - cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=-j15 + cd obj-x86_64-linux-gnu && make -j16 test ARGS\+=-j16 make[2]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process -j15 +/usr/bin/ctest --force-new-ctest-process -j16 Test project /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu Start 4: gauss-1 Start 5: gauss-2 @@ -8968,955 +9003,955 @@ Start 14: gauss-ushort-2 Start 15: lung-1 Start 20: ptv-1 - 1/480 Test #4: gauss-1 ............................... Passed 0.20 sec Start 21: ptv-2 - 2/480 Test #5: gauss-2 ............................... Passed 0.20 sec + 1/480 Test #8: gauss-5 ............................... Passed 0.95 sec Start 23: rect-2 - 3/480 Test #6: gauss-3 ............................... Passed 0.21 sec + 2/480 Test #11: gauss-double-1 ........................ Passed 0.86 sec Start 24: rect-2s - 4/480 Test #8: gauss-5 ............................... Passed 0.22 sec + 3/480 Test #4: gauss-1 ............................... Passed 1.05 sec Start 25: rect-3 - 5/480 Test #12: gauss-double-2 ........................ Passed 0.20 sec + 4/480 Test #1: black-1 ............................... Passed 0.98 sec Start 26: rect-4 - 6/480 Test #13: gauss-ushort-1 ........................ Passed 0.21 sec + 5/480 Test #7: gauss-4 ............................... Passed 0.97 sec Start 27: rect-5 - 7/480 Test #1: black-1 ............................... Passed 0.27 sec + 6/480 Test #9: gauss-6 ............................... Passed 0.98 sec Start 33: rect-10-roi-1 - 8/480 Test #7: gauss-4 ............................... Passed 0.28 sec + 7/480 Test #5: gauss-2 ............................... Passed 1.12 sec Start 36: rect-11-roi - 9/480 Test #20: ptv-1 ................................. Passed 0.24 sec + 8/480 Test #6: gauss-3 ............................... Passed 1.10 sec Start 37: rect-12 - 10/480 Test #11: gauss-double-1 ........................ Passed 0.29 sec + 9/480 Test #13: gauss-ushort-1 ........................ Passed 1.00 sec Start 38: rect-13 - 11/480 Test #9: gauss-6 ............................... Passed 0.33 sec + 10/480 Test #12: gauss-double-2 ........................ Passed 1.09 sec Start 39: rect-14 - 12/480 Test #14: gauss-ushort-2 ........................ Passed 0.36 sec + 11/480 Test #20: ptv-1 ................................. Passed 1.01 sec Start 40: rect-15 - 13/480 Test #24: rect-2s ............................... Passed 0.22 sec + 12/480 Test #21: ptv-2 ................................. Passed 1.01 sec Start 41: rect-16 - 14/480 Test #21: ptv-2 ................................. Passed 0.25 sec + 13/480 Test #14: gauss-ushort-2 ........................ Passed 1.11 sec Start 42: rect-17 - 15/480 Test #27: rect-5 ................................ Passed 0.22 sec + 14/480 Test #26: rect-4 ................................ Passed 0.86 sec Start 50: rectarr-03-a - 16/480 Test #26: rect-4 ................................ Passed 0.24 sec + 15/480 Test #24: rect-2s ............................... Passed 0.92 sec Start 55: sphere-1 - 17/480 Test #33: rect-10-roi-1 ......................... Passed 0.23 sec + 16/480 Test #36: rect-11-roi ........................... Passed 0.83 sec Start 56: sphere-2 - 18/480 Test #36: rect-11-roi ........................... Passed 0.23 sec + 17/480 Test #37: rect-12 ............................... Passed 0.92 sec Start 57: sphere-3 - 19/480 Test #39: rect-14 ............................... Passed 0.20 sec + 18/480 Test #33: rect-10-roi-1 ......................... Passed 0.98 sec Start 59: sphere-5 - 20/480 Test #37: rect-12 ............................... Passed 0.25 sec + 19/480 Test #39: rect-14 ............................... Passed 0.86 sec Start 63: vf-zero - 21/480 Test #38: rect-13 ............................... Passed 0.28 sec + 20/480 Test #40: rect-15 ............................... Passed 0.87 sec Start 64: vf-trans-1 - 22/480 Test #40: rect-15 ............................... Passed 0.25 sec + 21/480 Test #38: rect-13 ............................... Passed 0.99 sec Start 65: vf-trans-2 - 23/480 Test #42: rect-17 ............................... Passed 0.22 sec + 22/480 Test #27: rect-5 ................................ Passed 1.11 sec Start 76: bspline-c - 24/480 Test #50: rectarr-03-a .......................... Passed 0.22 sec + 23/480 Test #42: rect-17 ............................... Passed 0.96 sec Start 82: bspline-mi-c-1 - 25/480 Test #41: rect-16 ............................... Passed 0.27 sec + 24/480 Test #41: rect-16 ............................... Passed 1.01 sec Start 88: drr-a - 26/480 Test #55: sphere-1 .............................. Passed 0.22 sec + 25/480 Test #55: sphere-1 .............................. Passed 0.80 sec Start 219: plm-reg-itk-translation - 27/480 Test #56: sphere-2 .............................. Passed 0.24 sec + 26/480 Test #50: rectarr-03-a .......................... Passed 0.96 sec Start 248: plm-bsp-mse-h - 28/480 Test #57: sphere-3 .............................. Passed 0.23 sec + 27/480 Test #56: sphere-2 .............................. Passed 1.00 sec Start 359: plm-reg-compose - 29/480 Test #63: vf-zero ............................... Passed 0.21 sec + 28/480 Test #59: sphere-5 .............................. Passed 0.90 sec Start 440: plm-xf-convert-d - 30/480 Test #59: sphere-5 .............................. Passed 0.23 sec + 29/480 Test #64: vf-trans-1 ............................ Passed 0.87 sec Start 16: lung-2 - 31/480 Test #64: vf-trans-1 ............................ Passed 0.20 sec + 30/480 Test #65: vf-trans-2 ............................ Passed 0.86 sec Start 30: rect-8 - 32/480 Test #65: vf-trans-2 ............................ Passed 0.23 sec + 31/480 Test #57: sphere-3 .............................. Passed 1.00 sec Start 31: rect-9 - 33/480 Test #30: rect-8 ................................ Passed 0.22 sec + 32/480 Test #63: vf-zero ............................... Passed 1.09 sec Start 45: rectarr-01-a - 34/480 Test #22: rect-1 ................................ Passed 1.13 sec + 33/480 Test #22: rect-1 ................................ Passed 3.39 sec Start 149: plm-convert-dicom-a - 35/480 Test #440: plm-xf-convert-d ...................... Passed 0.43 sec + 34/480 Test #2: donut-1 ............................... Passed 3.62 sec Start 51: rectarr-03 - 36/480 Test #2: donut-1 ............................... Passed 1.23 sec + 35/480 Test #30: rect-8 ................................ Passed 0.77 sec Start 52: rectarr-04 - 37/480 Test #31: rect-9 ................................ Passed 0.48 sec + 36/480 Test #440: plm-xf-convert-d ...................... Passed 0.96 sec Start 66: vf-radial-1 - 38/480 Test #219: plm-reg-itk-translation ............... Passed 0.72 sec + 37/480 Test #76: bspline-c ............................. Passed 1.79 sec Start 91: drr-b - 39/480 Test #248: plm-bsp-mse-h ......................... Passed 0.72 sec + 38/480 Test #31: rect-9 ................................ Passed 1.02 sec Start 94: drr-c - 40/480 Test #25: rect-3 ................................ Passed 1.26 sec + 39/480 Test #45: rectarr-01-a .......................... Passed 0.96 sec Start 97: plm-drr-a - 41/480 Test #88: drr-a ................................. Passed 0.80 sec - Start 100: fdk-cpu-a - 42/480 Test #45: rectarr-01-a .......................... Passed 0.52 sec - Start 103: fdk-cpu-d - 43/480 Test #359: plm-reg-compose ....................... Passed 0.78 sec + 40/480 Test #25: rect-3 ................................ Passed 3.28 sec Start 106: landmark-warp-a - 44/480 Test #23: rect-2 ................................ Passed 1.35 sec + 41/480 Test #23: rect-2 ................................ Passed 3.40 sec Start 111: landmark-warp-b - 45/480 Test #76: bspline-c ............................. Passed 0.90 sec + 42/480 Test #88: drr-a ................................. Passed 2.32 sec + Start 100: fdk-cpu-a + 43/480 Test #219: plm-reg-itk-translation ............... Passed 1.93 sec + Start 103: fdk-cpu-d + 44/480 Test #66: vf-radial-1 ........................... Passed 0.91 sec Start 116: landmark-warp-c - 46/480 Test #149: plm-convert-dicom-a ................... Passed 0.51 sec + 45/480 Test #359: plm-reg-compose ....................... Passed 1.92 sec Start 122: plm-add-a - 47/480 Test #66: vf-radial-1 ........................... Passed 0.30 sec + 46/480 Test #248: plm-bsp-mse-h ......................... Passed 2.19 sec Start 125: plm-add-b - 48/480 Test #51: rectarr-03 ............................ Passed 0.48 sec + 47/480 Test #52: rectarr-04 ............................ Passed 1.27 sec Start 128: plm-add-vf-a - 49/480 Test #52: rectarr-04 ............................ Passed 0.45 sec + 48/480 Test #51: rectarr-03 ............................ Passed 1.37 sec Start 131: plm-add-vf-b - 50/480 Test #106: landmark-warp-a ....................... Passed 0.45 sec + 49/480 Test #149: plm-convert-dicom-a ................... Passed 1.74 sec Start 134: plm-boundary-a - 51/480 Test #111: landmark-warp-b ....................... Passed 0.55 sec + 50/480 Test #111: landmark-warp-b ....................... Passed 0.87 sec Start 137: plm-boundary-b - 52/480 Test #122: plm-add-a ............................. Passed 0.74 sec + 51/480 Test #106: landmark-warp-a ....................... Passed 1.32 sec Start 140: plm-boundary-c - 53/480 Test #131: plm-add-vf-b .......................... Passed 0.77 sec + 52/480 Test #91: drr-b ................................. Passed 2.34 sec Start 143: plm-boundary-d - 54/480 Test #91: drr-b ................................. Passed 1.26 sec + 53/480 Test #116: landmark-warp-c ....................... Passed 1.50 sec Start 146: plm-boundary-e - 55/480 Test #94: drr-c ................................. Passed 1.22 sec + 54/480 Test #122: plm-add-a ............................. Passed 1.49 sec Start 152: plm-convert-dicom-b - 56/480 Test #116: landmark-warp-c ....................... Passed 1.15 sec + 55/480 Test #134: plm-boundary-a ........................ Passed 1.24 sec Start 161: plm-convert-dicom-donut-a - 57/480 Test #134: plm-boundary-a ........................ Passed 0.74 sec + 56/480 Test #94: drr-c ................................. Passed 2.39 sec Start 164: plm-convert-dicom-donut-b - 58/480 Test #125: plm-add-b ............................. Passed 1.14 sec + 57/480 Test #125: plm-add-b ............................. Passed 1.46 sec Start 168: plm-convert-cxt - 59/480 Test #82: bspline-mi-c-1 ........................ Passed 2.13 sec + 58/480 Test #131: plm-add-vf-b .......................... Passed 1.51 sec Start 172: plm-convert-dose-scale - 60/480 Test #137: plm-boundary-b ........................ Passed 0.75 sec + 59/480 Test #128: plm-add-vf-a .......................... Passed 1.54 sec Start 190: plm-fill-a - 61/480 Test #128: plm-add-vf-a .......................... Passed 1.23 sec + 60/480 Test #97: plm-drr-a ............................. Passed 2.54 sec Start 193: plm-mask-a - 62/480 Test #97: plm-drr-a ............................. Passed 1.44 sec + 61/480 Test #137: plm-boundary-b ........................ Passed 1.53 sec Start 196: plm-gamma-a - 63/480 Test #140: plm-boundary-c ........................ Passed 0.54 sec + 62/480 Test #140: plm-boundary-c ........................ Passed 1.32 sec Start 199: plm-gamma-b - 64/480 Test #143: plm-boundary-d ........................ Passed 0.51 sec + 63/480 Test #146: plm-boundary-e ........................ Passed 0.87 sec Start 206: plm-maximum-a - 65/480 Test #146: plm-boundary-e ........................ Passed 0.36 sec + 64/480 Test #143: plm-boundary-d ........................ Passed 0.96 sec Start 209: plm-multiply-a - 66/480 Test #100: fdk-cpu-a ............................. Passed 1.59 sec + 65/480 Test #161: plm-convert-dicom-donut-a ............. Passed 0.92 sec Start 212: plm-multiply-vf-a - 67/480 Test #161: plm-convert-dicom-donut-a ............. Passed 0.39 sec + 66/480 Test #152: plm-convert-dicom-b ................... Passed 1.12 sec Start 216: plm-reg-align-center - 68/480 Test #168: plm-convert-cxt ....................... Passed 0.31 sec + 67/480 Test #164: plm-convert-dicom-donut-b ............. Passed 1.14 sec Start 222: plm-reg-itk-rigid-a - 69/480 Test #164: plm-convert-dicom-donut-b ............. Passed 0.41 sec + 68/480 Test #168: plm-convert-cxt ....................... Passed 1.16 sec Start 227: plm-reg-itk-similarity - 70/480 Test #172: plm-convert-dose-scale ................ Passed 0.33 sec + 69/480 Test #172: plm-convert-dose-scale ................ Passed 1.13 sec Start 232: plm-reg-itk-bspline - 71/480 Test #190: plm-fill-a ............................ Passed 0.33 sec + 70/480 Test #82: bspline-mi-c-1 ........................ Passed 5.50 sec Start 235: plm-reg-itk-demons - 72/480 Test #193: plm-mask-a ............................ Passed 0.30 sec + 71/480 Test #190: plm-fill-a ............................ Passed 1.19 sec Start 245: plm-bsp-mse-c - 73/480 Test #152: plm-convert-dicom-b ................... Passed 0.53 sec + 72/480 Test #193: plm-mask-a ............................ Passed 1.13 sec Start 251: plm-bsp-mse-k - 74/480 Test #206: plm-maximum-a ......................... Passed 0.38 sec + 73/480 Test #100: fdk-cpu-a ............................. Passed 3.41 sec Start 254: plm-bsp-mse-l - 75/480 Test #212: plm-multiply-vf-a ..................... Passed 0.28 sec + 74/480 Test #212: plm-multiply-vf-a ..................... Passed 0.82 sec Start 257: plm-bsp-mi-c - 76/480 Test #209: plm-multiply-a ........................ Passed 0.34 sec + 75/480 Test #209: plm-multiply-a ........................ Passed 1.09 sec Start 260: plm-bsp-mi-k - 77/480 Test #199: plm-gamma-b ........................... Passed 0.49 sec + 76/480 Test #199: plm-gamma-b ........................... Passed 1.44 sec Start 263: plm-bsp-gm-k - 78/480 Test #216: plm-reg-align-center .................. Passed 0.32 sec + 77/480 Test #206: plm-maximum-a ......................... Passed 1.21 sec Start 268: plm-bsp-openmp - 79/480 Test #196: plm-gamma-a ........................... Passed 0.83 sec + 78/480 Test #216: plm-reg-align-center .................. Passed 1.19 sec Start 275: plm-bsp-ushort - 80/480 Test #251: plm-bsp-mse-k ......................... Passed 0.54 sec + 79/480 Test #251: plm-bsp-mse-k ......................... Passed 1.23 sec Start 278: plm-bsp-double - 81/480 Test #245: plm-bsp-mse-c ......................... Passed 0.66 sec + 80/480 Test #254: plm-bsp-mse-l ......................... Passed 1.10 sec Start 282: plm-bsp-char-output - 82/480 Test #254: plm-bsp-mse-l ......................... Passed 0.52 sec + 81/480 Test #245: plm-bsp-mse-c ......................... Passed 1.50 sec Start 286: plm-bsp-regularize-none - 83/480 Test #257: plm-bsp-mi-c .......................... Passed 0.65 sec + 82/480 Test #196: plm-gamma-a ........................... Passed 2.66 sec Start 289: plm-bsp-regularize-analytic - 84/480 Test #263: plm-bsp-gm-k .......................... Passed 0.62 sec + 83/480 Test #222: plm-reg-itk-rigid-a ................... Passed 1.87 sec Start 292: plm-bsp-regularize-numeric - 85/480 Test #222: plm-reg-itk-rigid-a ................... Passed 1.03 sec + 84/480 Test #227: plm-reg-itk-similarity ................ Passed 2.08 sec Start 296: plm-bsp-landmark-b - 86/480 Test #260: plm-bsp-mi-k .......................... Passed 0.78 sec + 85/480 Test #257: plm-bsp-mi-c .......................... Passed 1.63 sec Start 299: plm-bsp-landmark-c - 87/480 Test #227: plm-reg-itk-similarity ................ Passed 1.11 sec + 86/480 Test #235: plm-reg-itk-demons .................... Passed 2.21 sec Start 302: plm-bsp-landmark-d - 88/480 Test #268: plm-bsp-openmp ........................ Passed 0.97 sec + 87/480 Test #260: plm-bsp-mi-k .......................... Passed 1.65 sec Start 305: plm-bsp-landmark-e - 89/480 Test #235: plm-reg-itk-demons .................... Passed 1.34 sec + 88/480 Test #268: plm-bsp-openmp ........................ Passed 1.74 sec Start 308: plm-bsp-dcos-a - 90/480 Test #275: plm-bsp-ushort ........................ Passed 0.84 sec + 89/480 Test #275: plm-bsp-ushort ........................ Passed 1.82 sec Start 311: plm-bsp-dcos-b - 91/480 Test #278: plm-bsp-double ........................ Passed 1.04 sec + 90/480 Test #263: plm-bsp-gm-k .......................... Passed 2.13 sec Start 314: plm-bsp-dcos-c - 92/480 Test #282: plm-bsp-char-output ................... Passed 0.96 sec + 91/480 Test #278: plm-bsp-double ........................ Passed 1.82 sec Start 317: plm-bsp-dcos-d - 93/480 Test #286: plm-bsp-regularize-none ............... Passed 1.21 sec + 92/480 Test #282: plm-bsp-char-output ................... Passed 1.78 sec Start 320: plm-bsp-dcos-e - 94/480 Test #302: plm-bsp-landmark-d .................... Passed 0.89 sec + 93/480 Test #286: plm-bsp-regularize-none ............... Passed 1.65 sec Start 323: plm-bsp-dcos-f - 95/480 Test #296: plm-bsp-landmark-b .................... Passed 1.04 sec + 94/480 Test #302: plm-bsp-landmark-d .................... Passed 1.27 sec Start 326: plm-reg-multi-a - 96/480 Test #299: plm-bsp-landmark-c .................... Passed 1.07 sec + 95/480 Test #305: plm-bsp-landmark-e .................... Passed 1.70 sec Start 329: plm-reg-multi-b - 97/480 Test #305: plm-bsp-landmark-e .................... Passed 1.04 sec + 96/480 Test #299: plm-bsp-landmark-c .................... Passed 1.97 sec Start 332: plm-reg-dv-itk-translation - 98/480 Test #232: plm-reg-itk-bspline ................... Passed 2.29 sec + 97/480 Test #296: plm-bsp-landmark-b .................... Passed 2.54 sec Start 341: plm-reg-process-a - 99/480 Test #289: plm-bsp-regularize-analytic ........... Passed 1.44 sec + 98/480 Test #289: plm-bsp-regularize-analytic ........... Passed 3.24 sec Start 344: plm-reg-trans-a -100/480 Test #311: plm-bsp-dcos-b ........................ Passed 1.02 sec + 99/480 Test #308: plm-bsp-dcos-a ........................ Passed 2.69 sec Start 347: plm-reg-trans-b -101/480 Test #341: plm-reg-process-a ..................... Passed 0.47 sec +100/480 Test #232: plm-reg-itk-bspline ................... Passed 5.18 sec Start 350: plm-reg-trans-mi-a -102/480 Test #317: plm-bsp-dcos-d ........................ Passed 1.24 sec +101/480 Test #320: plm-bsp-dcos-e ........................ Passed 2.02 sec Start 353: plm-reg-autores-a -103/480 Test #314: plm-bsp-dcos-c ........................ Passed 1.30 sec +102/480 Test #311: plm-bsp-dcos-b ........................ Passed 2.53 sec Start 356: plm-reg-autores-b -104/480 Test #320: plm-bsp-dcos-e ........................ Passed 1.02 sec +103/480 Test #314: plm-bsp-dcos-c ........................ Passed 2.54 sec Start 360: plm-compose-a -105/480 Test #308: plm-bsp-dcos-a ........................ Passed 1.64 sec +104/480 Test #317: plm-bsp-dcos-d ........................ Passed 2.18 sec Start 364: plm-compose-b -106/480 Test #323: plm-bsp-dcos-f ........................ Passed 1.09 sec +105/480 Test #323: plm-bsp-dcos-f ........................ Passed 2.16 sec Start 368: plm-compose-c -107/480 Test #332: plm-reg-dv-itk-translation ............ Passed 1.08 sec +106/480 Test #341: plm-reg-process-a ..................... Passed 1.26 sec Start 372: plm-resample-a -108/480 Test #360: plm-compose-a ......................... Passed 0.43 sec +107/480 Test #332: plm-reg-dv-itk-translation ............ Passed 1.95 sec Start 375: plm-resample-b -109/480 Test #364: plm-compose-b ......................... Passed 0.45 sec +108/480 Test #364: plm-compose-b ......................... Passed 1.00 sec Start 378: plm-resample-c -110/480 Test #353: plm-reg-autores-a ..................... Passed 0.73 sec +109/480 Test #360: plm-compose-a ......................... Passed 1.04 sec Start 381: plm-scale-a -111/480 Test #329: plm-reg-multi-b ....................... Passed 1.64 sec +110/480 Test #353: plm-reg-autores-a ..................... Passed 1.69 sec Start 384: plm-scale-vf-a -112/480 Test #368: plm-compose-c ......................... Passed 0.66 sec +111/480 Test #15: lung-1 ................................ Passed 14.46 sec + Start 155: plm-convert-dicom-c +112/480 Test #368: plm-compose-c ......................... Passed 1.68 sec Start 390: plm-thumbnail-a -113/480 Test #372: plm-resample-a ........................ Passed 0.38 sec +113/480 Test #372: plm-resample-a ........................ Passed 1.26 sec Start 393: plm-thumbnail-b -114/480 Test #375: plm-resample-b ........................ Passed 0.40 sec +114/480 Test #356: plm-reg-autores-b ..................... Passed 1.85 sec Start 396: plm-thumbnail-c -115/480 Test #356: plm-reg-autores-b ..................... Passed 0.87 sec +115/480 Test #375: plm-resample-b ........................ Passed 1.26 sec Start 399: plm-union -116/480 Test #378: plm-resample-c ........................ Passed 0.41 sec +116/480 Test #381: plm-scale-a ........................... Passed 1.14 sec Start 402: plm-threshold-a -117/480 Test #384: plm-scale-vf-a ........................ Passed 0.29 sec +117/480 Test #378: plm-resample-c ........................ Passed 1.31 sec Start 405: plm-threshold-b -118/480 Test #381: plm-scale-a ........................... Passed 0.38 sec +118/480 Test #329: plm-reg-multi-b ....................... Passed 3.84 sec Start 408: plm-threshold-c -119/480 Test #393: plm-thumbnail-b ....................... Passed 0.30 sec +119/480 Test #384: plm-scale-vf-a ........................ Passed 1.33 sec Start 414: plm-warp-a -120/480 Test #390: plm-thumbnail-a ....................... Passed 0.34 sec +120/480 Test #390: plm-thumbnail-a ....................... Passed 1.28 sec Start 417: plm-warp-b -121/480 Test #399: plm-union ............................. Passed 0.29 sec +121/480 Test #393: plm-thumbnail-b ....................... Passed 1.35 sec Start 422: plm-warp-c -122/480 Test #396: plm-thumbnail-c ....................... Passed 0.35 sec +122/480 Test #402: plm-threshold-a ....................... Passed 0.97 sec Start 425: plm-warp-d -123/480 Test #402: plm-threshold-a ....................... Passed 0.32 sec +123/480 Test #396: plm-thumbnail-c ....................... Passed 1.36 sec Start 428: plm-warp-g -124/480 Test #405: plm-threshold-b ....................... Passed 0.24 sec +124/480 Test #399: plm-union ............................. Passed 1.33 sec Start 431: plm-warp-h -125/480 Test #15: lung-1 ................................ Passed 7.36 sec - Start 155: plm-convert-dicom-c -126/480 Test #408: plm-threshold-c ....................... Passed 0.25 sec +125/480 Test #408: plm-threshold-c ....................... Passed 0.79 sec Start 434: plm-warp-i -127/480 Test #417: plm-warp-b ............................ Passed 0.42 sec +126/480 Test #155: plm-convert-dicom-c ................... Passed 1.70 sec Start 437: plm-xf-convert-a -128/480 Test #414: plm-warp-a ............................ Passed 0.50 sec +127/480 Test #405: plm-threshold-b ....................... Passed 1.23 sec Start 441: plm-xf-convert-d-warp-1 -129/480 Test #428: plm-warp-g ............................ Passed 0.36 sec +128/480 Test #16: lung-2 ................................ Passed 14.04 sec Start 444: plm-xf-convert-d-warp-2 -130/480 Test #431: plm-warp-h ............................ Passed 0.35 sec +129/480 Test #434: plm-warp-i ............................ Passed 0.84 sec Start 450: xf-invert-vf-zero-1 -131/480 Test #103: fdk-cpu-d ............................. Passed 6.25 sec +130/480 Test #428: plm-warp-g ............................ Passed 1.06 sec Start 453: xf-invert-vf-trans-1 -132/480 Test #434: plm-warp-i ............................ Passed 0.40 sec +131/480 Test #437: plm-xf-convert-a ...................... Passed 0.98 sec Start 460: proton-dose-1 -133/480 Test #344: plm-reg-trans-a ....................... Passed 2.38 sec +132/480 Test #414: plm-warp-a ............................ Passed 1.47 sec Start 463: proton-dose-4a -134/480 Test #425: plm-warp-d ............................ Passed 0.56 sec +133/480 Test #417: plm-warp-b ............................ Passed 1.39 sec Start 466: proton-dose-4d -135/480 Test #437: plm-xf-convert-a ...................... Passed 0.22 sec +134/480 Test #425: plm-warp-d ............................ Passed 1.30 sec Start 469: proton-dose-5a -136/480 Test #326: plm-reg-multi-a ....................... Passed 2.70 sec +135/480 Test #431: plm-warp-h ............................ Passed 1.26 sec Start 472: proton-dose-5d -137/480 Test #347: plm-reg-trans-b ....................... Passed 2.29 sec +136/480 Test #441: plm-xf-convert-d-warp-1 ............... Passed 1.14 sec Start 475: proton-dose-6a -138/480 Test #155: plm-convert-dicom-c ................... Passed 0.51 sec +137/480 Test #422: plm-warp-c ............................ Passed 1.75 sec Start 32: rect-10 -139/480 Test #422: plm-warp-c ............................ Passed 0.71 sec +138/480 Test #326: plm-reg-multi-a ....................... Passed 7.02 sec Start 35: rect-11 -140/480 Test #292: plm-bsp-regularize-numeric ............ Passed 4.03 sec +139/480 Test #453: xf-invert-vf-trans-1 .................. Passed 1.05 sec Start 44: rect-19 -141/480 Test #441: plm-xf-convert-d-warp-1 ............... Passed 0.48 sec +140/480 Test #344: plm-reg-trans-a ....................... Passed 5.73 sec Start 46: rectarr-01 -142/480 Test #453: xf-invert-vf-trans-1 .................. Passed 0.46 sec +141/480 Test #450: xf-invert-vf-zero-1 ................... Passed 1.24 sec Start 47: rectarr-02 -143/480 Test #32: rect-10 ............................... Passed 0.31 sec +142/480 Test #444: plm-xf-convert-d-warp-2 ............... Passed 1.66 sec Start 48: rectarr-m-01 -144/480 Test #450: xf-invert-vf-zero-1 ................... Passed 0.52 sec +143/480 Test #32: rect-10 ............................... Passed 0.80 sec Start 49: rectarr-m-02 -145/480 Test #35: rect-11 ............................... Passed 0.39 sec +144/480 Test #347: plm-reg-trans-b ....................... Passed 6.06 sec Start 54: roi-1 -146/480 Test #444: plm-xf-convert-d-warp-2 ............... Passed 0.68 sec +145/480 Test #35: rect-11 ............................... Passed 0.84 sec Start 58: sphere-4 -147/480 Test #44: rect-19 ............................... Passed 0.32 sec +146/480 Test #44: rect-19 ............................... Passed 0.90 sec Start 68: vf-zero-stats -148/480 Test #46: rectarr-01 ............................ Passed 0.37 sec +147/480 Test #46: rectarr-01 ............................ Passed 1.01 sec Start 70: vf-trans-1-stats -149/480 Test #47: rectarr-02 ............................ Passed 0.32 sec +148/480 Test #47: rectarr-02 ............................ Passed 1.18 sec Start 72: vf-trans-2-stats -150/480 Test #48: rectarr-m-01 .......................... Passed 0.32 sec +149/480 Test #48: rectarr-m-01 .......................... Passed 1.05 sec Start 74: vf-radial-1-stats -151/480 Test #49: rectarr-m-02 .......................... Passed 0.33 sec +150/480 Test #103: fdk-cpu-d ............................. Passed 15.13 sec Start 78: bspline-g -152/480 Test #58: sphere-4 .............................. Passed 0.25 sec +151/480 Test #49: rectarr-m-02 .......................... Passed 1.08 sec Start 80: bspline-h -153/480 Test #54: roi-1 ................................. Passed 0.31 sec +152/480 Test #54: roi-1 ................................. Passed 0.97 sec Start 84: bspline-mi-c-2 -154/480 Test #68: vf-zero-stats ......................... Passed 0.46 sec +153/480 Test #58: sphere-4 .............................. Passed 0.82 sec Start 86: demons-a -155/480 Test #72: vf-trans-2-stats ...................... Passed 0.37 sec +154/480 Test #68: vf-zero-stats ......................... Passed 0.86 sec Start 89: drr-a-stats -156/480 Test #70: vf-trans-1-stats ...................... Passed 0.43 sec +155/480 Test #70: vf-trans-1-stats ...................... Passed 0.93 sec Start 92: drr-b-stats -157/480 Test #78: bspline-g ............................. Passed 0.42 sec +156/480 Test #292: plm-bsp-regularize-numeric ............ Passed 11.02 sec Start 95: drr-c-stats -158/480 Test #74: vf-radial-1-stats ..................... Passed 0.47 sec +157/480 Test #72: vf-trans-2-stats ...................... Passed 1.05 sec Start 98: plm-drr-a-stats -159/480 Test #16: lung-2 ................................ Passed 8.34 sec +158/480 Test #74: vf-radial-1-stats ..................... Passed 1.08 sec Start 101: fdk-cpu-a-stats -160/480 Test #89: drr-a-stats ........................... Passed 0.25 sec +159/480 Test #78: bspline-g ............................. Passed 1.22 sec Start 104: fdk-cpu-d-stats -161/480 Test #98: plm-drr-a-stats ....................... Passed 0.24 sec +160/480 Test #89: drr-a-stats ........................... Passed 0.98 sec Start 107: landmark-warp-a-stats-1 -162/480 Test #92: drr-b-stats ........................... Passed 0.32 sec +161/480 Test #92: drr-b-stats ........................... Passed 0.76 sec Start 109: landmark-warp-a-stats-2 -163/480 Test #95: drr-c-stats ........................... Passed 0.34 sec +162/480 Test #98: plm-drr-a-stats ....................... Passed 0.67 sec Start 112: landmark-warp-b-stats-1 -164/480 Test #101: fdk-cpu-a-stats ....................... Passed 0.32 sec +163/480 Test #95: drr-c-stats ........................... Passed 0.84 sec Start 114: landmark-warp-b-stats-2 -165/480 Test #104: fdk-cpu-d-stats ....................... Passed 0.39 sec +164/480 Test #80: bspline-h ............................. Passed 1.91 sec Start 117: landmark-warp-c-stats-1 -166/480 Test #107: landmark-warp-a-stats-1 ............... Passed 0.31 sec +165/480 Test #107: landmark-warp-a-stats-1 ............... Passed 0.95 sec Start 119: landmark-warp-c-stats-2 -167/480 Test #80: bspline-h ............................. Passed 1.04 sec +166/480 Test #109: landmark-warp-a-stats-2 ............... Passed 1.00 sec Start 123: plm-add-a-stats -168/480 Test #109: landmark-warp-a-stats-2 ............... Passed 0.38 sec +167/480 Test #101: fdk-cpu-a-stats ....................... Passed 1.30 sec Start 126: plm-add-b-stats -169/480 Test #112: landmark-warp-b-stats-1 ............... Passed 0.33 sec +168/480 Test #112: landmark-warp-b-stats-1 ............... Passed 0.87 sec Start 129: plm-add-vf-a-stats -170/480 Test #460: proton-dose-1 ......................... Passed 2.05 sec +169/480 Test #104: fdk-cpu-d-stats ....................... Passed 1.28 sec Start 132: plm-add-vf-b-stats -171/480 Test #86: demons-a .............................. Passed 1.03 sec +170/480 Test #114: landmark-warp-b-stats-2 ............... Passed 1.06 sec Start 135: plm-boundary-a-stats -172/480 Test #123: plm-add-a-stats ....................... Passed 0.27 sec +171/480 Test #117: landmark-warp-c-stats-1 ............... Passed 1.15 sec Start 138: plm-boundary-b-stats -173/480 Test #117: landmark-warp-c-stats-1 ............... Passed 0.37 sec +172/480 Test #126: plm-add-b-stats ....................... Passed 0.94 sec Start 141: plm-boundary-c-stats -174/480 Test #114: landmark-warp-b-stats-2 ............... Passed 0.52 sec +173/480 Test #132: plm-add-vf-b-stats .................... Passed 0.91 sec Start 144: plm-boundary-d-stats -175/480 Test #119: landmark-warp-c-stats-2 ............... Passed 0.38 sec +174/480 Test #119: landmark-warp-c-stats-2 ............... Passed 1.19 sec Start 147: plm-boundary-e-stats -176/480 Test #84: bspline-mi-c-2 ........................ Passed 1.35 sec +175/480 Test #129: plm-add-vf-a-stats .................... Passed 1.06 sec Start 150: plm-convert-dicom-a-stats -177/480 Test #126: plm-add-b-stats ....................... Passed 0.43 sec +176/480 Test #123: plm-add-a-stats ....................... Passed 1.19 sec Start 153: plm-convert-dicom-b-stats -178/480 Test #132: plm-add-vf-b-stats .................... Passed 0.25 sec +177/480 Test #135: plm-boundary-a-stats .................. Passed 1.09 sec Start 156: plm-convert-dicom-c-stats -179/480 Test #129: plm-add-vf-a-stats .................... Passed 0.44 sec +178/480 Test #153: plm-convert-dicom-b-stats ............. Passed 0.38 sec Start 162: plm-convert-dicom-donut-a-stats -180/480 Test #135: plm-boundary-a-stats .................. Passed 0.27 sec +179/480 Test #138: plm-boundary-b-stats .................. Passed 1.11 sec Start 165: plm-convert-dicom-donut-b-stats -181/480 Test #141: plm-boundary-c-stats .................. Passed 0.28 sec +180/480 Test #86: demons-a .............................. Passed 4.08 sec Start 169: plm-convert-cxt-stats -182/480 Test #153: plm-convert-dicom-b-stats ............. Passed 0.12 sec +181/480 Test #147: plm-boundary-e-stats .................. Passed 0.92 sec Start 173: plm-convert-dose-scale-stats -183/480 Test #147: plm-boundary-e-stats .................. Passed 0.28 sec +182/480 Test #141: plm-boundary-c-stats .................. Passed 1.15 sec Start 175: plm-dice-a -184/480 Test #138: plm-boundary-b-stats .................. Passed 0.34 sec +183/480 Test #144: plm-boundary-d-stats .................. Passed 1.08 sec Start 177: plm-dice-b -185/480 Test #144: plm-boundary-d-stats .................. Passed 0.35 sec +184/480 Test #84: bspline-mi-c-2 ........................ Passed 4.42 sec Start 179: plm-dice-c -186/480 Test #150: plm-convert-dicom-a-stats ............. Passed 0.35 sec +185/480 Test #156: plm-convert-dicom-c-stats ............. Passed 0.95 sec Start 184: plm-dvh-a -187/480 Test #156: plm-convert-dicom-c-stats ............. Passed 0.27 sec +186/480 Test #150: plm-convert-dicom-a-stats ............. Passed 1.24 sec Start 187: plm-dvh-b -188/480 Test #173: plm-convert-dose-scale-stats .......... Passed 0.26 sec +187/480 Test #460: proton-dose-1 ......................... Passed 7.39 sec Start 191: plm-fill-a-stats -189/480 Test #165: plm-convert-dicom-donut-b-stats ....... Passed 0.39 sec +188/480 Test #162: plm-convert-dicom-donut-a-stats ....... Passed 1.11 sec Start 194: plm-mask-a-stats -190/480 Test #175: plm-dice-a ............................ Passed 0.31 sec +189/480 Test #165: plm-convert-dicom-donut-b-stats ....... Passed 0.95 sec Start 197: plm-gamma-a-stats -191/480 Test #169: plm-convert-cxt-stats ................. Passed 0.35 sec +190/480 Test #169: plm-convert-cxt-stats ................. Passed 1.01 sec Start 200: plm-gamma-b-stats -192/480 Test #162: plm-convert-dicom-donut-a-stats ....... Passed 0.45 sec +191/480 Test #173: plm-convert-dose-scale-stats .......... Passed 1.08 sec Start 202: plm-gamma-c -193/480 Test #179: plm-dice-c ............................ Passed 0.30 sec +192/480 Test #175: plm-dice-a ............................ Passed 1.01 sec Start 204: plm-gamma-d -194/480 Test #177: plm-dice-b ............................ Passed 0.36 sec +193/480 Test #177: plm-dice-b ............................ Passed 1.00 sec Start 207: plm-maximum-a-stats -195/480 Test #184: plm-dvh-a ............................. Passed 0.38 sec +194/480 Test #179: plm-dice-c ............................ Passed 1.00 sec Start 210: plm-multiply-a-stats -196/480 Test #187: plm-dvh-b ............................. Passed 0.38 sec +195/480 Test #187: plm-dvh-b ............................. Passed 0.88 sec Start 213: plm-multiply-vf-a-stats -197/480 Test #194: plm-mask-a-stats ...................... Passed 0.28 sec +196/480 Test #184: plm-dvh-a ............................. Passed 1.12 sec Start 217: plm-reg-align-center-stats -198/480 Test #191: plm-fill-a-stats ...................... Passed 0.35 sec +197/480 Test #191: plm-fill-a-stats ...................... Passed 1.04 sec Start 220: plm-reg-itk-translation-stats -199/480 Test #350: plm-reg-trans-mi-a .................... Passed 4.95 sec +198/480 Test #194: plm-mask-a-stats ...................... Passed 1.08 sec Start 223: plm-reg-itk-rigid-a-stats-1 -200/480 Test #200: plm-gamma-b-stats ..................... Passed 0.33 sec +199/480 Test #197: plm-gamma-a-stats ..................... Passed 1.05 sec Start 225: plm-reg-itk-rigid-a-stats-2 -201/480 Test #207: plm-maximum-a-stats ................... Passed 0.29 sec +200/480 Test #200: plm-gamma-b-stats ..................... Passed 1.15 sec Start 228: plm-reg-itk-similarity-stats-1 -202/480 Test #197: plm-gamma-a-stats ..................... Passed 0.49 sec +201/480 Test #213: plm-multiply-vf-a-stats ............... Passed 0.89 sec Start 230: plm-reg-itk-similarity-stats-2 -203/480 Test #210: plm-multiply-a-stats .................. Passed 0.30 sec +202/480 Test #210: plm-multiply-a-stats .................. Passed 1.04 sec Start 233: plm-reg-itk-bspline-stats-1 -204/480 Test #213: plm-multiply-vf-a-stats ............... Passed 0.30 sec +203/480 Test #207: plm-maximum-a-stats ................... Passed 1.11 sec Start 237: plm-reg-itk-demons-stats-2 -205/480 Test #202: plm-gamma-c ........................... Passed 0.53 sec +204/480 Test #217: plm-reg-align-center-stats ............ Passed 1.09 sec Start 239: plm-reg-itk-demons-diff -206/480 Test #223: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.26 sec +205/480 Test #204: plm-gamma-d ........................... Passed 1.62 sec Start 241: plm-reg-itk-demons-logd -207/480 Test #217: plm-reg-align-center-stats ............ Passed 0.32 sec +206/480 Test #202: plm-gamma-c ........................... Passed 1.66 sec Start 243: plm-reg-itk-demons-sym-logd -208/480 Test #220: plm-reg-itk-translation-stats ......... Passed 0.37 sec +207/480 Test #223: plm-reg-itk-rigid-a-stats-1 ........... Passed 1.05 sec Start 246: plm-bsp-mse-c-stats -209/480 Test #225: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.38 sec +208/480 Test #220: plm-reg-itk-translation-stats ......... Passed 1.17 sec Start 249: plm-bsp-mse-h-stats -210/480 Test #230: plm-reg-itk-similarity-stats-2 ........ Passed 0.29 sec +209/480 Test #225: plm-reg-itk-rigid-a-stats-2 ........... Passed 1.08 sec Start 252: plm-bsp-mse-k-stats -211/480 Test #228: plm-reg-itk-similarity-stats-1 ........ Passed 0.43 sec +210/480 Test #350: plm-reg-trans-mi-a .................... Passed 14.34 sec Start 255: plm-bsp-mse-l-stats -212/480 Test #204: plm-gamma-d ........................... Passed 0.76 sec +211/480 Test #228: plm-reg-itk-similarity-stats-1 ........ Passed 1.09 sec Start 258: plm-bsp-mi-c-stats -213/480 Test #237: plm-reg-itk-demons-stats-2 ............ Passed 0.39 sec +212/480 Test #230: plm-reg-itk-similarity-stats-2 ........ Passed 1.17 sec Start 261: plm-bsp-mi-k-stats -214/480 Test #233: plm-reg-itk-bspline-stats-1 ........... Passed 0.45 sec +213/480 Test #237: plm-reg-itk-demons-stats-2 ............ Passed 1.18 sec Start 264: plm-bsp-gm-k-stats -215/480 Test #246: plm-bsp-mse-c-stats ................... Passed 0.31 sec +214/480 Test #233: plm-reg-itk-bspline-stats-1 ........... Passed 1.23 sec Start 266: plm-bsp-sm-multi-a -216/480 Test #255: plm-bsp-mse-l-stats ................... Passed 0.30 sec +215/480 Test #246: plm-bsp-mse-c-stats ................... Passed 1.06 sec Start 269: plm-bsp-openmp-stats -217/480 Test #258: plm-bsp-mi-c-stats .................... Passed 0.31 sec +216/480 Test #249: plm-bsp-mse-h-stats ................... Passed 1.09 sec Start 271: plm-bsp-resume -218/480 Test #252: plm-bsp-mse-k-stats ................... Passed 0.36 sec +217/480 Test #252: plm-bsp-mse-k-stats ................... Passed 1.06 sec Start 273: plm-bsp-logfile -219/480 Test #249: plm-bsp-mse-h-stats ................... Passed 0.46 sec +218/480 Test #258: plm-bsp-mi-c-stats .................... Passed 0.96 sec Start 276: plm-bsp-ushort-stats -220/480 Test #261: plm-bsp-mi-k-stats .................... Passed 0.30 sec +219/480 Test #255: plm-bsp-mse-l-stats ................... Passed 1.06 sec Start 279: plm-bsp-double-stats -221/480 Test #463: proton-dose-4a ........................ Passed 3.97 sec +220/480 Test #261: plm-bsp-mi-k-stats .................... Passed 1.19 sec Start 283: plm-bsp-char-output-stats -222/480 Test #264: plm-bsp-gm-k-stats .................... Passed 0.32 sec +221/480 Test #264: plm-bsp-gm-k-stats .................... Passed 1.18 sec Start 285: plm-bsp-rect -223/480 Test #269: plm-bsp-openmp-stats .................. Passed 0.24 sec +222/480 Test #269: plm-bsp-openmp-stats .................. Passed 0.89 sec Start 287: plm-bsp-regularize-none-stats -224/480 Test #276: plm-bsp-ushort-stats .................. Passed 0.35 sec +223/480 Test #276: plm-bsp-ushort-stats .................. Passed 0.97 sec Start 290: plm-bsp-regularize-analytic-stats -225/480 Test #279: plm-bsp-double-stats .................. Passed 0.38 sec +224/480 Test #279: plm-bsp-double-stats .................. Passed 1.18 sec Start 293: plm-bsp-regularize-numeric-stats -226/480 Test #283: plm-bsp-char-output-stats ............. Passed 0.45 sec +225/480 Test #266: plm-bsp-sm-multi-a .................... Passed 2.15 sec Start 297: plm-bsp-landmark-b-stats -227/480 Test #271: plm-bsp-resume ........................ Passed 0.69 sec +226/480 Test #271: plm-bsp-resume ........................ Passed 1.83 sec Start 300: plm-bsp-landmark-c-stats -228/480 Test #266: plm-bsp-sm-multi-a .................... Passed 0.84 sec +227/480 Test #283: plm-bsp-char-output-stats ............. Passed 1.38 sec Start 303: plm-bsp-landmark-d-stats -229/480 Test #287: plm-bsp-regularize-none-stats ......... Passed 0.59 sec +228/480 Test #287: plm-bsp-regularize-none-stats ......... Passed 1.15 sec Start 306: plm-bsp-landmark-e-stats -230/480 Test #290: plm-bsp-regularize-analytic-stats ..... Passed 0.40 sec +229/480 Test #273: plm-bsp-logfile ....................... Passed 1.95 sec Start 309: plm-bsp-dcos-a-stats -231/480 Test #273: plm-bsp-logfile ....................... Passed 0.89 sec +230/480 Test #239: plm-reg-itk-demons-diff ............... Passed 3.49 sec Start 312: plm-bsp-dcos-b-stats -232/480 Test #293: plm-bsp-regularize-numeric-stats ...... Passed 0.48 sec +231/480 Test #290: plm-bsp-regularize-analytic-stats ..... Passed 1.16 sec Start 315: plm-bsp-dcos-c-stats -233/480 Test #285: plm-bsp-rect .......................... Passed 0.81 sec +232/480 Test #241: plm-reg-itk-demons-logd ............... Passed 3.51 sec Start 318: plm-bsp-dcos-d-stats -234/480 Test #303: plm-bsp-landmark-d-stats .............. Passed 0.33 sec +233/480 Test #293: plm-bsp-regularize-numeric-stats ...... Passed 1.08 sec Start 321: plm-bsp-dcos-e-stats -235/480 Test #297: plm-bsp-landmark-b-stats .............. Passed 0.44 sec +234/480 Test #285: plm-bsp-rect .......................... Passed 2.03 sec Start 324: plm-bsp-dcos-f-stats -236/480 Test #300: plm-bsp-landmark-c-stats .............. Passed 0.36 sec +235/480 Test #297: plm-bsp-landmark-b-stats .............. Passed 1.09 sec Start 327: plm-reg-multi-a-stats -237/480 Test #309: plm-bsp-dcos-a-stats .................. Passed 0.25 sec +236/480 Test #306: plm-bsp-landmark-e-stats .............. Passed 0.97 sec Start 330: plm-reg-multi-b-stats -238/480 Test #306: plm-bsp-landmark-e-stats .............. Passed 0.32 sec +237/480 Test #312: plm-bsp-dcos-b-stats .................. Passed 0.85 sec Start 333: plm-reg-dv-itk-translation-stats -239/480 Test #241: plm-reg-itk-demons-logd ............... Passed 1.70 sec +238/480 Test #300: plm-bsp-landmark-c-stats .............. Passed 1.22 sec Start 342: plm-reg-process-a-stats -240/480 Test #312: plm-bsp-dcos-b-stats .................. Passed 0.31 sec +239/480 Test #303: plm-bsp-landmark-d-stats .............. Passed 1.18 sec Start 345: plm-reg-trans-a-stats -241/480 Test #318: plm-bsp-dcos-d-stats .................. Passed 0.29 sec +240/480 Test #318: plm-bsp-dcos-d-stats .................. Passed 0.87 sec Start 348: plm-reg-trans-b-stats -242/480 Test #239: plm-reg-itk-demons-diff ............... Passed 1.86 sec +241/480 Test #309: plm-bsp-dcos-a-stats .................. Passed 1.26 sec Start 351: plm-reg-trans-mi-a-stats -243/480 Test #324: plm-bsp-dcos-f-stats .................. Passed 0.27 sec +242/480 Test #463: proton-dose-4a ........................ Passed 13.95 sec Start 354: plm-reg-autores-a-stats -244/480 Test #327: plm-reg-multi-a-stats ................. Passed 0.28 sec +243/480 Test #315: plm-bsp-dcos-c-stats .................. Passed 1.08 sec Start 357: plm-reg-autores-b-stats -245/480 Test #330: plm-reg-multi-b-stats ................. Passed 0.27 sec +244/480 Test #243: plm-reg-itk-demons-sym-logd ........... Passed 4.67 sec Start 362: plm-compose-a-stats -246/480 Test #475: proton-dose-6a ........................ Passed 5.13 sec +245/480 Test #324: plm-bsp-dcos-f-stats .................. Passed 0.81 sec Start 366: plm-compose-b-stats -247/480 Test #315: plm-bsp-dcos-c-stats .................. Passed 0.44 sec +246/480 Test #321: plm-bsp-dcos-e-stats .................. Passed 1.09 sec Start 370: plm-compose-c-stats -248/480 Test #333: plm-reg-dv-itk-translation-stats ...... Passed 0.28 sec +247/480 Test #327: plm-reg-multi-a-stats ................. Passed 0.84 sec Start 373: plm-resample-a-stats -249/480 Test #321: plm-bsp-dcos-e-stats .................. Passed 0.40 sec +248/480 Test #348: plm-reg-trans-b-stats ................. Passed 0.82 sec Start 376: plm-resample-b-stats -250/480 Test #342: plm-reg-process-a-stats ............... Passed 0.31 sec +249/480 Test #333: plm-reg-dv-itk-translation-stats ...... Passed 1.08 sec Start 379: plm-resample-c-stats -251/480 Test #345: plm-reg-trans-a-stats ................. Passed 0.30 sec +250/480 Test #330: plm-reg-multi-b-stats ................. Passed 1.11 sec Start 382: plm-scale-a-stats -252/480 Test #348: plm-reg-trans-b-stats ................. Passed 0.32 sec +251/480 Test #342: plm-reg-process-a-stats ............... Passed 1.02 sec Start 385: plm-scale-vf-a-stats -253/480 Test #357: plm-reg-autores-b-stats ............... Passed 0.26 sec +252/480 Test #345: plm-reg-trans-a-stats ................. Passed 0.96 sec Start 387: plm-sift-a -254/480 Test #351: plm-reg-trans-mi-a-stats .............. Passed 0.29 sec +253/480 Test #351: plm-reg-trans-mi-a-stats .............. Passed 0.91 sec Start 391: plm-thumbnail-a-stats -255/480 Test #469: proton-dose-5a ........................ Passed 5.43 sec +254/480 Test #354: plm-reg-autores-a-stats ............... Passed 0.96 sec Start 394: plm-thumbnail-b-stats -256/480 Test #370: plm-compose-c-stats ................... Passed 0.26 sec +255/480 Test #362: plm-compose-a-stats ................... Passed 0.98 sec Start 397: plm-thumbnail-c-stats -257/480 Test #354: plm-reg-autores-a-stats ............... Passed 0.34 sec +256/480 Test #357: plm-reg-autores-b-stats ............... Passed 1.13 sec Start 400: plm-union-stats -258/480 Test #466: proton-dose-4d ........................ Passed 5.48 sec +257/480 Test #373: plm-resample-a-stats .................. Passed 0.92 sec Start 403: plm-threshold-a-stats -259/480 Test #376: plm-resample-b-stats .................. Passed 0.27 sec +258/480 Test #366: plm-compose-b-stats ................... Passed 1.14 sec Start 406: plm-threshold-b-stats -260/480 Test #362: plm-compose-a-stats ................... Passed 0.41 sec +259/480 Test #370: plm-compose-c-stats ................... Passed 1.10 sec Start 409: plm-threshold-c-stats -261/480 Test #373: plm-resample-a-stats .................. Passed 0.35 sec +260/480 Test #379: plm-resample-c-stats .................. Passed 0.91 sec Start 415: plm-warp-a-stats -262/480 Test #379: plm-resample-c-stats .................. Passed 0.31 sec +261/480 Test #376: plm-resample-b-stats .................. Passed 0.97 sec Start 418: plm-warp-b-stats-1 -263/480 Test #385: plm-scale-vf-a-stats .................. Passed 0.23 sec +262/480 Test #382: plm-scale-a-stats ..................... Passed 1.00 sec Start 420: plm-warp-b-stats-2 -264/480 Test #243: plm-reg-itk-demons-sym-logd ........... Passed 2.36 sec +263/480 Test #385: plm-scale-vf-a-stats .................. Passed 1.07 sec Start 423: plm-warp-c-stats -265/480 Test #366: plm-compose-b-stats ................... Passed 0.47 sec +264/480 Test #394: plm-thumbnail-b-stats ................. Passed 0.99 sec Start 426: plm-warp-d-stats -266/480 Test #382: plm-scale-a-stats ..................... Passed 0.32 sec +265/480 Test #391: plm-thumbnail-a-stats ................. Passed 1.09 sec Start 429: plm-warp-g-stats-1 -267/480 Test #391: plm-thumbnail-a-stats ................. Passed 0.28 sec +266/480 Test #469: proton-dose-5a ........................ Passed 15.86 sec Start 432: plm-warp-h-stats-1 -268/480 Test #397: plm-thumbnail-c-stats ................. Passed 0.28 sec +267/480 Test #397: plm-thumbnail-c-stats ................. Passed 1.10 sec Start 435: plm-warp-i-stats-1 -269/480 Test #406: plm-threshold-b-stats ................. Passed 0.26 sec +268/480 Test #475: proton-dose-6a ........................ Passed 16.00 sec Start 438: plm-xf-convert-b -270/480 Test #394: plm-thumbnail-b-stats ................. Passed 0.34 sec +269/480 Test #400: plm-union-stats ....................... Passed 1.19 sec Start 442: plm-xf-convert-d-warp-1-stats -271/480 Test #400: plm-union-stats ....................... Passed 0.34 sec +270/480 Test #403: plm-threshold-a-stats ................. Passed 1.19 sec Start 445: plm-xf-convert-d-warp-2-stats -272/480 Test #409: plm-threshold-c-stats ................. Passed 0.27 sec +271/480 Test #406: plm-threshold-b-stats ................. Passed 1.08 sec Start 451: xf-invert-vf-zero-1-stats -273/480 Test #415: plm-warp-a-stats ...................... Passed 0.28 sec +272/480 Test #409: plm-threshold-c-stats ................. Passed 1.20 sec Start 454: xf-invert-vf-trans-1-stats -274/480 Test #472: proton-dose-5d ........................ Passed 5.87 sec +273/480 Test #415: plm-warp-a-stats ...................... Passed 1.07 sec Start 456: xf-invert-vrs-a -275/480 Test #418: plm-warp-b-stats-1 .................... Passed 0.31 sec +274/480 Test #418: plm-warp-b-stats-1 .................... Passed 1.04 sec Start 458: xf-invert-vrs-b -276/480 Test #403: plm-threshold-a-stats ................. Passed 0.44 sec +275/480 Test #420: plm-warp-b-stats-2 .................... Passed 1.14 sec Start 461: proton-dose-1-stats -277/480 Test #420: plm-warp-b-stats-2 .................... Passed 0.31 sec +276/480 Test #423: plm-warp-c-stats ...................... Passed 1.16 sec Start 464: proton-dose-4a-stats -278/480 Test #423: plm-warp-c-stats ...................... Passed 0.30 sec - Start 467: proton-dose-4d-stats -279/480 Test #426: plm-warp-d-stats ...................... Passed 0.29 sec +277/480 Test #429: plm-warp-g-stats-1 .................... Passed 1.09 sec Start 470: proton-dose-5a-stats -280/480 Test #432: plm-warp-h-stats-1 .................... Passed 0.28 sec - Start 473: proton-dose-5d-stats -281/480 Test #429: plm-warp-g-stats-1 .................... Passed 0.34 sec +278/480 Test #426: plm-warp-d-stats ...................... Passed 1.16 sec Start 476: proton-dose-6a-stats -282/480 Test #438: plm-xf-convert-b ...................... Passed 0.25 sec +279/480 Test #432: plm-warp-h-stats-1 .................... Passed 1.15 sec Start 478: wed-a -283/480 Test #435: plm-warp-i-stats-1 .................... Passed 0.34 sec +280/480 Test #466: proton-dose-4d ........................ Passed 17.18 sec + Start 467: proton-dose-4d-stats +281/480 Test #435: plm-warp-i-stats-1 .................... Passed 1.06 sec Start 3: gabor-01 -284/480 Test #445: plm-xf-convert-d-warp-2-stats ......... Passed 0.27 sec +282/480 Test #438: plm-xf-convert-b ...................... Passed 1.01 sec Start 10: gauss-7 -285/480 Test #454: xf-invert-vf-trans-1-stats ............ Passed 0.25 sec +283/480 Test #442: plm-xf-convert-d-warp-1-stats ......... Passed 1.00 sec Start 17: gw-lung-a -286/480 Test #458: xf-invert-vrs-b ....................... Passed 0.22 sec +284/480 Test #451: xf-invert-vf-zero-1-stats ............. Passed 1.01 sec Start 18: gw-lung-b -287/480 Test #451: xf-invert-vf-zero-1-stats ............. Passed 0.30 sec +285/480 Test #445: plm-xf-convert-d-warp-2-stats ......... Passed 1.05 sec Start 19: gw-lung-c -288/480 Test #456: xf-invert-vrs-a ....................... Passed 0.25 sec +286/480 Test #454: xf-invert-vf-trans-1-stats ............ Passed 0.95 sec Start 28: rect-6 -289/480 Test #442: plm-xf-convert-d-warp-1-stats ......... Passed 0.41 sec +287/480 Test #456: xf-invert-vrs-a ....................... Passed 0.85 sec Start 29: rect-7 -290/480 Test #464: proton-dose-4a-stats .................. Passed 0.28 sec +288/480 Test #458: xf-invert-vrs-b ....................... Passed 0.86 sec Start 34: rect-10-roi-2 -291/480 Test #461: proton-dose-1-stats ................... Passed 0.33 sec +289/480 Test #461: proton-dose-1-stats ................... Passed 0.99 sec Start 43: rect-18 -292/480 Test #467: proton-dose-4d-stats .................. Passed 0.34 sec +290/480 Test #467: proton-dose-4d-stats .................. Passed 0.89 sec Start 53: rgc-1 -293/480 Test #473: proton-dose-5d-stats .................. Passed 0.32 sec +291/480 Test #464: proton-dose-4a-stats .................. Passed 1.17 sec Start 60: xramp-1 -294/480 Test #476: proton-dose-6a-stats .................. Passed 0.29 sec +292/480 Test #470: proton-dose-5a-stats .................. Passed 1.12 sec Start 61: yramp-1 -295/480 Test #470: proton-dose-5a-stats .................. Passed 0.36 sec +293/480 Test #10: gauss-7 ............................... Passed 0.86 sec Start 62: zramp-1 -296/480 Test #10: gauss-7 ............................... Passed 0.25 sec +294/480 Test #3: gabor-01 .............................. Passed 0.93 sec Start 67: vf-gaussian-1 -297/480 Test #3: gabor-01 .............................. Passed 0.27 sec +295/480 Test #476: proton-dose-6a-stats .................. Passed 1.18 sec Start 69: vf-zero-check -298/480 Test #69: vf-zero-check ......................... Passed 0.04 sec +296/480 Test #34: rect-10-roi-2 ......................... Passed 0.82 sec Start 71: vf-trans-1-check -299/480 Test #28: rect-6 ................................ Passed 0.26 sec +297/480 Test #17: gw-lung-a ............................. Passed 1.04 sec Start 73: vf-trans-2-check -300/480 Test #71: vf-trans-1-check ...................... Passed 0.04 sec +298/480 Test #69: vf-zero-check ......................... Passed 0.16 sec Start 75: vf-radial-1-check -301/480 Test #18: gw-lung-b ............................. Passed 0.32 sec +299/480 Test #28: rect-6 ................................ Passed 0.93 sec Start 77: bspline-c-check -302/480 Test #73: vf-trans-2-check ...................... Passed 0.05 sec +300/480 Test #71: vf-trans-1-check ...................... Passed 0.09 sec Start 79: bspline-g-check -303/480 Test #75: vf-radial-1-check ..................... Passed 0.05 sec +301/480 Test #29: rect-7 ................................ Passed 0.96 sec Start 81: bspline-h-check -304/480 Test #29: rect-7 ................................ Passed 0.28 sec +302/480 Test #73: vf-trans-2-check ...................... Passed 0.10 sec Start 83: bspline-mi-c-1-check -305/480 Test #53: rgc-1 ................................. Passed 0.22 sec +303/480 Test #19: gw-lung-c ............................. Passed 1.09 sec Start 85: bspline-mi-c-2-check -306/480 Test #43: rect-18 ............................... Passed 0.26 sec +304/480 Test #77: bspline-c-check ....................... Passed 0.11 sec Start 87: demons-a-check -307/480 Test #61: yramp-1 ............................... Passed 0.22 sec +305/480 Test #75: vf-radial-1-check ..................... Passed 0.15 sec Start 90: drr-a-check -308/480 Test #17: gw-lung-a ............................. Passed 0.41 sec +306/480 Test #79: bspline-g-check ....................... Passed 0.12 sec Start 93: drr-b-check -309/480 Test #77: bspline-c-check ....................... Passed 0.08 sec +307/480 Test #18: gw-lung-b ............................. Passed 1.19 sec Start 96: drr-c-check -310/480 Test #79: bspline-g-check ....................... Passed 0.07 sec +308/480 Test #81: bspline-h-check ....................... Passed 0.14 sec Start 99: plm-drr-a-check -311/480 Test #81: bspline-h-check ....................... Passed 0.07 sec +309/480 Test #83: bspline-mi-c-1-check .................. Passed 0.15 sec Start 102: fdk-cpu-a-check -312/480 Test #83: bspline-mi-c-1-check .................. Passed 0.06 sec +310/480 Test #85: bspline-mi-c-2-check .................. Passed 0.15 sec Start 105: fdk-cpu-d-check -313/480 Test #60: xramp-1 ............................... Passed 0.26 sec +311/480 Test #43: rect-18 ............................... Passed 0.85 sec Start 108: landmark-warp-a-check-1 -314/480 Test #85: bspline-mi-c-2-check .................. Passed 0.05 sec +312/480 Test #87: demons-a-check ........................ Passed 0.16 sec Start 110: landmark-warp-a-check-2 -315/480 Test #19: gw-lung-c ............................. Passed 0.41 sec +313/480 Test #90: drr-a-check ........................... Passed 0.15 sec Start 113: landmark-warp-b-check-1 -316/480 Test #62: zramp-1 ............................... Passed 0.24 sec +314/480 Test #96: drr-c-check ........................... Passed 0.13 sec Start 115: landmark-warp-b-check-2 -317/480 Test #87: demons-a-check ........................ Passed 0.04 sec +315/480 Test #93: drr-b-check ........................... Passed 0.15 sec Start 118: landmark-warp-c-check-1 -318/480 Test #90: drr-a-check ........................... Passed 0.06 sec +316/480 Test #99: plm-drr-a-check ....................... Passed 0.16 sec Start 120: landmark-warp-c-check-2 -319/480 Test #93: drr-b-check ........................... Passed 0.05 sec +317/480 Test #108: landmark-warp-a-check-1 ............... Passed 0.10 sec Start 121: landmark-warp-d -320/480 Test #96: drr-c-check ........................... Passed 0.05 sec +318/480 Test #102: fdk-cpu-a-check ....................... Passed 0.18 sec Start 124: plm-add-a-check -321/480 Test #34: rect-10-roi-2 ......................... Passed 0.36 sec +319/480 Test #110: landmark-warp-a-check-2 ............... Passed 0.15 sec Start 127: plm-add-b-check -322/480 Test #99: plm-drr-a-check ....................... Passed 0.04 sec +320/480 Test #105: fdk-cpu-d-check ....................... Passed 0.20 sec Start 130: plm-add-vf-a-check -323/480 Test #102: fdk-cpu-a-check ....................... Passed 0.03 sec +321/480 Test #113: landmark-warp-b-check-1 ............... Passed 0.16 sec Start 133: plm-add-vf-b-check -324/480 Test #67: vf-gaussian-1 ......................... Passed 0.26 sec +322/480 Test #115: landmark-warp-b-check-2 ............... Passed 0.20 sec Start 136: plm-boundary-a-check -325/480 Test #105: fdk-cpu-d-check ....................... Passed 0.06 sec +323/480 Test #118: landmark-warp-c-check-1 ............... Passed 0.16 sec Start 139: plm-boundary-b-check -326/480 Test #108: landmark-warp-a-check-1 ............... Passed 0.06 sec +324/480 Test #53: rgc-1 ................................. Passed 0.87 sec Start 142: plm-boundary-c-check -327/480 Test #110: landmark-warp-a-check-2 ............... Passed 0.06 sec +325/480 Test #120: landmark-warp-c-check-2 ............... Passed 0.21 sec Start 145: plm-boundary-d-check -328/480 Test #113: landmark-warp-b-check-1 ............... Passed 0.06 sec +326/480 Test #124: plm-add-a-check ....................... Passed 0.19 sec Start 148: plm-boundary-e-check -329/480 Test #115: landmark-warp-b-check-2 ............... Passed 0.06 sec +327/480 Test #127: plm-add-b-check ....................... Passed 0.19 sec Start 151: plm-convert-dicom-a-check -330/480 Test #118: landmark-warp-c-check-1 ............... Passed 0.06 sec +328/480 Test #130: plm-add-vf-a-check .................... Passed 0.19 sec Start 154: plm-convert-dicom-b-check -331/480 Test #120: landmark-warp-c-check-2 ............... Passed 0.06 sec +329/480 Test #60: xramp-1 ............................... Passed 0.96 sec Start 157: plm-convert-dicom-c-check -332/480 Test #124: plm-add-a-check ....................... Passed 0.05 sec +330/480 Test #61: yramp-1 ............................... Passed 0.94 sec Start 158: plm-convert-dicom-d -333/480 Test #127: plm-add-b-check ....................... Passed 0.05 sec +331/480 Test #133: plm-add-vf-b-check .................... Passed 0.19 sec Start 159: plm-convert-dicom-e -334/480 Test #130: plm-add-vf-a-check .................... Passed 0.04 sec +332/480 Test #136: plm-boundary-a-check .................. Passed 0.16 sec Start 160: plm-convert-dicom-f -335/480 Test #133: plm-add-vf-b-check .................... Passed 0.04 sec +333/480 Test #67: vf-gaussian-1 ......................... Passed 0.86 sec Start 163: plm-convert-dicom-donut-a-check -336/480 Test #136: plm-boundary-a-check .................. Passed 0.03 sec +334/480 Test #62: zramp-1 ............................... Passed 0.89 sec Start 166: plm-convert-dicom-donut-b-check -337/480 Test #139: plm-boundary-b-check .................. Passed 0.06 sec +335/480 Test #139: plm-boundary-b-check .................. Passed 0.26 sec Start 167: plm-convert-dicom-donut-c -338/480 Test #142: plm-boundary-c-check .................. Passed 0.05 sec +336/480 Test #142: plm-boundary-c-check .................. Passed 0.22 sec Start 170: plm-convert-cxt-check -339/480 Test #145: plm-boundary-d-check .................. Passed 0.05 sec +337/480 Test #145: plm-boundary-d-check .................. Passed 0.21 sec Start 171: plm-convert-prefix-fcsv -340/480 Test #148: plm-boundary-e-check .................. Passed 0.05 sec +338/480 Test #148: plm-boundary-e-check .................. Passed 0.19 sec Start 174: plm-convert-dose-scale-check -341/480 Test #151: plm-convert-dicom-a-check ............. Passed 0.04 sec +339/480 Test #151: plm-convert-dicom-a-check ............. Passed 0.17 sec Start 176: plm-dice-a-check-1 -342/480 Test #154: plm-convert-dicom-b-check ............. Passed 0.04 sec +340/480 Test #154: plm-convert-dicom-b-check ............. Passed 0.14 sec Start 178: plm-dice-b-check-1 -343/480 Test #157: plm-convert-dicom-c-check ............. Passed 0.03 sec +341/480 Test #157: plm-convert-dicom-c-check ............. Passed 0.26 sec Start 180: plm-dice-c-check-1 -344/480 Test #163: plm-convert-dicom-donut-a-check ....... Passed 0.05 sec +342/480 Test #163: plm-convert-dicom-donut-a-check ....... Passed 0.20 sec Start 181: plm-dice-c-check-2 -345/480 Test #166: plm-convert-dicom-donut-b-check ....... Passed 0.06 sec +343/480 Test #166: plm-convert-dicom-donut-b-check ....... Passed 0.21 sec Start 182: plm-dmap-a -346/480 Test #170: plm-convert-cxt-check ................. Passed 0.06 sec +344/480 Test #170: plm-convert-cxt-check ................. Passed 0.19 sec Start 183: plm-dmap-b -347/480 Test #176: plm-dice-a-check-1 .................... Passed 0.05 sec +345/480 Test #174: plm-convert-dose-scale-check .......... Passed 0.14 sec Start 185: plm-dvh-a-check-1 -348/480 Test #174: plm-convert-dose-scale-check .......... Passed 0.05 sec +346/480 Test #176: plm-dice-a-check-1 .................... Passed 0.12 sec Start 186: plm-dvh-a-check-2 -349/480 Test #178: plm-dice-b-check-1 .................... Passed 0.04 sec +347/480 Test #178: plm-dice-b-check-1 .................... Passed 0.17 sec Start 188: plm-dvh-b-check-1 -350/480 Test #180: plm-dice-c-check-1 .................... Passed 0.04 sec +348/480 Test #180: plm-dice-c-check-1 .................... Passed 0.14 sec Start 189: plm-dvh-b-check-2 -351/480 Test #181: plm-dice-c-check-2 .................... Passed 0.03 sec +349/480 Test #181: plm-dice-c-check-2 .................... Passed 0.12 sec Start 192: plm-fill-a-check -352/480 Test #185: plm-dvh-a-check-1 ..................... Passed 0.05 sec +350/480 Test #472: proton-dose-5d ........................ Passed 19.33 sec + Start 473: proton-dose-5d-stats +351/480 Test #185: plm-dvh-a-check-1 ..................... Passed 0.17 sec Start 195: plm-mask-a-check -353/480 Test #186: plm-dvh-a-check-2 ..................... Passed 0.04 sec +352/480 Test #186: plm-dvh-a-check-2 ..................... Passed 0.16 sec Start 198: plm-gamma-a-check -354/480 Test #188: plm-dvh-b-check-1 ..................... Passed 0.06 sec +353/480 Test #188: plm-dvh-b-check-1 ..................... Passed 0.16 sec Start 201: plm-gamma-b-check -355/480 Test #189: plm-dvh-b-check-2 ..................... Passed 0.05 sec +354/480 Test #189: plm-dvh-b-check-2 ..................... Passed 0.17 sec Start 203: plm-gamma-c-check -356/480 Test #192: plm-fill-a-check ...................... Passed 0.05 sec +355/480 Test #192: plm-fill-a-check ...................... Passed 0.17 sec Start 205: plm-gamma-d-check -357/480 Test #158: plm-convert-dicom-d ................... Passed 0.19 sec +356/480 Test #195: plm-mask-a-check ...................... Passed 0.16 sec Start 208: plm-maximum-a-check -358/480 Test #121: landmark-warp-d ....................... Passed 0.27 sec +357/480 Test #198: plm-gamma-a-check ..................... Passed 0.15 sec Start 211: plm-multiply-a-check -359/480 Test #198: plm-gamma-a-check ..................... Passed 0.05 sec +358/480 Test #201: plm-gamma-b-check ..................... Passed 0.14 sec Start 214: plm-multiply-vf-a-check -360/480 Test #201: plm-gamma-b-check ..................... Passed 0.04 sec +359/480 Test #158: plm-convert-dicom-d ................... Passed 0.70 sec Start 215: plm-usage -361/480 Test #203: plm-gamma-c-check ..................... Passed 0.06 sec +360/480 Test #203: plm-gamma-c-check ..................... Passed 0.14 sec Start 218: plm-reg-align-center-check -362/480 Test #195: plm-mask-a-check ...................... Passed 0.09 sec +361/480 Test #205: plm-gamma-d-check ..................... Passed 0.14 sec Start 221: plm-reg-itk-translation-check -363/480 Test #205: plm-gamma-d-check ..................... Passed 0.06 sec +362/480 Test #208: plm-maximum-a-check ................... Passed 0.12 sec Start 224: plm-reg-itk-rigid-a-check-1 -364/480 Test #208: plm-maximum-a-check ................... Passed 0.05 sec +363/480 Test #211: plm-multiply-a-check .................. Passed 0.11 sec Start 226: plm-reg-itk-rigid-a-check-2 -365/480 Test #211: plm-multiply-a-check .................. Passed 0.04 sec +364/480 Test #214: plm-multiply-vf-a-check ............... Passed 0.13 sec Start 229: plm-reg-itk-similarity-check-1 -366/480 Test #159: plm-convert-dicom-e ................... Passed 0.24 sec +365/480 Test #218: plm-reg-align-center-check ............ Passed 0.13 sec Start 231: plm-reg-itk-similarity-check-2 -367/480 Test #214: plm-multiply-vf-a-check ............... Passed 0.04 sec +366/480 Test #221: plm-reg-itk-translation-check ......... Passed 0.13 sec Start 234: plm-reg-itk-bspline-check-1 -368/480 Test #218: plm-reg-align-center-check ............ Passed 0.07 sec +367/480 Test #224: plm-reg-itk-rigid-a-check-1 ........... Passed 0.13 sec Start 236: plm-reg-itk-demons-check-1 -369/480 Test #160: plm-convert-dicom-f ................... Passed 0.30 sec +368/480 Test #226: plm-reg-itk-rigid-a-check-2 ........... Passed 0.14 sec Start 238: plm-reg-itk-demons-check-2 -370/480 Test #221: plm-reg-itk-translation-check ......... Passed 0.06 sec +369/480 Test #229: plm-reg-itk-similarity-check-1 ........ Passed 0.13 sec Start 240: plm-reg-itk-demons-diff-check-1 -371/480 Test #224: plm-reg-itk-rigid-a-check-1 ........... Passed 0.05 sec +370/480 Test #121: landmark-warp-d ....................... Passed 1.27 sec Start 242: plm-reg-itk-demons-logd-check-1 -372/480 Test #226: plm-reg-itk-rigid-a-check-2 ........... Passed 0.04 sec +371/480 Test #231: plm-reg-itk-similarity-check-2 ........ Passed 0.14 sec Start 244: plm-reg-itk-demons-sym-logd-check-1 -373/480 Test #229: plm-reg-itk-similarity-check-1 ........ Passed 0.05 sec +372/480 Test #234: plm-reg-itk-bspline-check-1 ........... Passed 0.14 sec Start 247: plm-bsp-mse-c-check -374/480 Test #231: plm-reg-itk-similarity-check-2 ........ Passed 0.05 sec +373/480 Test #160: plm-convert-dicom-f ................... Passed 0.99 sec Start 250: plm-bsp-mse-h-check -375/480 Test #234: plm-reg-itk-bspline-check-1 ........... Passed 0.04 sec +374/480 Test #236: plm-reg-itk-demons-check-1 ............ Passed 0.14 sec Start 253: plm-bsp-mse-k-check -376/480 Test #236: plm-reg-itk-demons-check-1 ............ Passed 0.03 sec +375/480 Test #238: plm-reg-itk-demons-check-2 ............ Passed 0.14 sec Start 256: plm-bsp-mse-l-check -377/480 Test #238: plm-reg-itk-demons-check-2 ............ Passed 0.04 sec +376/480 Test #159: plm-convert-dicom-e ................... Passed 1.07 sec Start 259: plm-bsp-mi-c-check -378/480 Test #240: plm-reg-itk-demons-diff-check-1 ....... Passed 0.03 sec +377/480 Test #240: plm-reg-itk-demons-diff-check-1 ....... Passed 0.16 sec Start 262: plm-bsp-mi-k-check -379/480 Test #242: plm-reg-itk-demons-logd-check-1 ....... Passed 0.04 sec +378/480 Test #242: plm-reg-itk-demons-logd-check-1 ....... Passed 0.15 sec Start 265: plm-bsp-gm-k-check -380/480 Test #244: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.05 sec +379/480 Test #244: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.16 sec Start 267: plm-bsp-sm-multi-a-stats -381/480 Test #247: plm-bsp-mse-c-check ................... Passed 0.05 sec +380/480 Test #247: plm-bsp-mse-c-check ................... Passed 0.16 sec Start 270: plm-bsp-openmp-check -382/480 Test #250: plm-bsp-mse-h-check ................... Passed 0.04 sec +381/480 Test #250: plm-bsp-mse-h-check ................... Passed 0.16 sec Start 272: plm-bsp-resume-stats -383/480 Test #253: plm-bsp-mse-k-check ................... Passed 0.04 sec +382/480 Test #256: plm-bsp-mse-l-check ................... Passed 0.14 sec Start 274: plm-bsp-logfile-check -384/480 Test #256: plm-bsp-mse-l-check ................... Passed 0.03 sec +383/480 Test #253: plm-bsp-mse-k-check ................... Passed 0.16 sec Start 277: plm-bsp-ushort-check -385/480 Test #259: plm-bsp-mi-c-check .................... Passed 0.03 sec +384/480 Test #262: plm-bsp-mi-k-check .................... Passed 0.13 sec Start 280: plm-bsp-double-check -386/480 Test #262: plm-bsp-mi-k-check .................... Passed 0.05 sec +385/480 Test #259: plm-bsp-mi-c-check .................... Passed 0.15 sec Start 281: plm-bsp-itk-output -387/480 Test #265: plm-bsp-gm-k-check .................... Passed 0.04 sec +386/480 Test #265: plm-bsp-gm-k-check .................... Passed 0.16 sec Start 284: plm-bsp-char-output-check -388/480 Test #182: plm-dmap-a ............................ Passed 0.34 sec +387/480 Test #270: plm-bsp-openmp-check .................. Passed 0.12 sec Start 288: plm-bsp-regularize-none-check -389/480 Test #183: plm-dmap-b ............................ Passed 0.33 sec +388/480 Test #274: plm-bsp-logfile-check ................. Passed 0.12 sec Start 291: plm-bsp-regularize-analytic-check -390/480 Test #215: plm-usage ............................. Passed 0.20 sec +389/480 Test #277: plm-bsp-ushort-check .................. Passed 0.13 sec Start 294: plm-bsp-regularize-numeric-check -391/480 Test #270: plm-bsp-openmp-check .................. Passed 0.06 sec +390/480 Test #280: plm-bsp-double-check .................. Passed 0.15 sec Start 295: plm-bsp-landmark-a -392/480 Test #274: plm-bsp-logfile-check ................. Passed 0.05 sec +391/480 Test #284: plm-bsp-char-output-check ............. Passed 0.14 sec Start 298: plm-bsp-landmark-b-check -393/480 Test #277: plm-bsp-ushort-check .................. Passed 0.05 sec +392/480 Test #288: plm-bsp-regularize-none-check ......... Passed 0.12 sec Start 301: plm-bsp-landmark-c-check -394/480 Test #280: plm-bsp-double-check .................. Passed 0.05 sec +393/480 Test #182: plm-dmap-a ............................ Passed 1.17 sec Start 304: plm-bsp-landmark-d-check -395/480 Test #284: plm-bsp-char-output-check ............. Passed 0.04 sec +394/480 Test #291: plm-bsp-regularize-analytic-check ..... Passed 0.16 sec Start 307: plm-bsp-landmark-e-check -396/480 Test #288: plm-bsp-regularize-none-check ......... Passed 0.04 sec +395/480 Test #183: plm-dmap-b ............................ Passed 1.18 sec Start 310: plm-bsp-dcos-a-check -397/480 Test #291: plm-bsp-regularize-analytic-check ..... Passed 0.03 sec +396/480 Test #294: plm-bsp-regularize-numeric-check ...... Passed 0.14 sec Start 313: plm-bsp-dcos-b-check -398/480 Test #294: plm-bsp-regularize-numeric-check ...... Passed 0.07 sec +397/480 Test #215: plm-usage ............................. Passed 0.83 sec Start 316: plm-bsp-dcos-c-check -399/480 Test #298: plm-bsp-landmark-b-check .............. Passed 0.05 sec +398/480 Test #298: plm-bsp-landmark-b-check .............. Passed 0.12 sec Start 319: plm-bsp-dcos-d-check -400/480 Test #301: plm-bsp-landmark-c-check .............. Passed 0.05 sec +399/480 Test #301: plm-bsp-landmark-c-check .............. Passed 0.15 sec Start 322: plm-bsp-dcos-e-check -401/480 Test #304: plm-bsp-landmark-d-check .............. Passed 0.05 sec +400/480 Test #307: plm-bsp-landmark-e-check .............. Passed 0.12 sec Start 325: plm-bsp-dcos-f-check -402/480 Test #307: plm-bsp-landmark-e-check .............. Passed 0.05 sec +401/480 Test #304: plm-bsp-landmark-d-check .............. Passed 0.16 sec Start 328: plm-reg-multi-a-check -403/480 Test #313: plm-bsp-dcos-b-check .................. Passed 0.03 sec +402/480 Test #310: plm-bsp-dcos-a-check .................. Passed 0.12 sec Start 331: plm-reg-multi-b-check -404/480 Test #316: plm-bsp-dcos-c-check .................. Passed 0.03 sec +403/480 Test #313: plm-bsp-dcos-b-check .................. Passed 0.15 sec Start 334: plm-reg-dv-itk-translation-check -405/480 Test #310: plm-bsp-dcos-a-check .................. Passed 0.06 sec +404/480 Test #473: proton-dose-5d-stats .................. Passed 1.24 sec Start 335: plm-reg-roi-a -406/480 Test #319: plm-bsp-dcos-d-check .................. Passed 0.04 sec +405/480 Test #316: plm-bsp-dcos-c-check .................. Passed 0.17 sec Start 336: plm-reg-roi-b -407/480 Test #322: plm-bsp-dcos-e-check .................. Passed 0.04 sec +406/480 Test #322: plm-bsp-dcos-e-check .................. Passed 0.15 sec Start 337: plm-reg-roi-c -408/480 Test #325: plm-bsp-dcos-f-check .................. Passed 0.05 sec +407/480 Test #319: plm-bsp-dcos-d-check .................. Passed 0.20 sec Start 338: plm-reg-roi-d -409/480 Test #328: plm-reg-multi-a-check ................. Passed 0.04 sec +408/480 Test #328: plm-reg-multi-a-check ................. Passed 0.14 sec Start 339: plm-reg-roi-e -410/480 Test #331: plm-reg-multi-b-check ................. Passed 0.04 sec +409/480 Test #325: plm-bsp-dcos-f-check .................. Passed 0.16 sec Start 340: plm-reg-stiffness-a -411/480 Test #334: plm-reg-dv-itk-translation-check ...... Passed 0.07 sec +410/480 Test #334: plm-reg-dv-itk-translation-check ...... Passed 0.15 sec Start 343: plm-reg-process-a-check -412/480 Test #343: plm-reg-process-a-check ............... Passed 0.04 sec +411/480 Test #331: plm-reg-multi-b-check ................. Passed 0.22 sec Start 346: plm-reg-trans-a-check -413/480 Test #346: plm-reg-trans-a-check ................. Passed 0.03 sec +412/480 Test #346: plm-reg-trans-a-check ................. Passed 0.14 sec Start 349: plm-reg-trans-b-check -414/480 Test #272: plm-bsp-resume-stats .................. Passed 0.29 sec +413/480 Test #343: plm-reg-process-a-check ............... Passed 0.18 sec Start 352: plm-reg-trans-mi-a-check -415/480 Test #349: plm-reg-trans-b-check ................. Passed 0.04 sec +414/480 Test #272: plm-bsp-resume-stats .................. Passed 0.90 sec Start 355: plm-reg-autores-a-check -416/480 Test #352: plm-reg-trans-mi-a-check .............. Passed 0.04 sec +415/480 Test #349: plm-reg-trans-b-check ................. Passed 0.13 sec Start 358: plm-reg-autores-b-check -417/480 Test #267: plm-bsp-sm-multi-a-stats .............. Passed 0.35 sec +416/480 Test #352: plm-reg-trans-mi-a-check .............. Passed 0.16 sec Start 361: plm-compose-a-warp -418/480 Test #355: plm-reg-autores-a-check ............... Passed 0.04 sec +417/480 Test #267: plm-bsp-sm-multi-a-stats .............. Passed 1.06 sec Start 363: plm-compose-a-check -419/480 Test #281: plm-bsp-itk-output .................... Passed 0.34 sec +418/480 Test #358: plm-reg-autores-b-check ............... Passed 0.13 sec Start 365: plm-compose-b-warp -420/480 Test #358: plm-reg-autores-b-check ............... Passed 0.04 sec +419/480 Test #355: plm-reg-autores-a-check ............... Passed 0.18 sec Start 367: plm-compose-b-check -421/480 Test #363: plm-compose-a-check ................... Passed 0.04 sec +420/480 Test #363: plm-compose-a-check ................... Passed 0.10 sec Start 369: plm-compose-c-warp -422/480 Test #367: plm-compose-b-check ................... Passed 0.04 sec +421/480 Test #367: plm-compose-b-check ................... Passed 0.14 sec Start 371: plm-compose-c-check -423/480 Test #371: plm-compose-c-check ................... Passed 0.03 sec +422/480 Test #371: plm-compose-c-check ................... Passed 0.12 sec Start 374: plm-resample-a-check -424/480 Test #374: plm-resample-a-check .................. Passed 0.04 sec +423/480 Test #281: plm-bsp-itk-output .................... Passed 1.32 sec Start 377: plm-resample-b-check -425/480 Test #295: plm-bsp-landmark-a .................... Passed 0.51 sec +424/480 Test #374: plm-resample-a-check .................. Passed 0.13 sec Start 380: plm-resample-c-check -426/480 Test #377: plm-resample-b-check .................. Passed 0.10 sec +425/480 Test #377: plm-resample-b-check .................. Passed 0.16 sec Start 383: plm-scale-a-check -427/480 Test #380: plm-resample-c-check .................. Passed 0.08 sec +426/480 Test #380: plm-resample-c-check .................. Passed 0.12 sec Start 386: plm-scale-vf-a-check -428/480 Test #383: plm-scale-a-check ..................... Passed 0.11 sec +427/480 Test #295: plm-bsp-landmark-a .................... Passed 1.41 sec Start 392: plm-thumbnail-a-check -429/480 Test #386: plm-scale-vf-a-check .................. Passed 0.14 sec +428/480 Test #383: plm-scale-a-check ..................... Passed 0.12 sec Start 395: plm-thumbnail-b-check -430/480 Test #392: plm-thumbnail-a-check ................. Passed 0.14 sec +429/480 Test #386: plm-scale-vf-a-check .................. Passed 0.19 sec Start 398: plm-thumbnail-c-check -431/480 Test #361: plm-compose-a-warp .................... Passed 0.54 sec +430/480 Test #392: plm-thumbnail-a-check ................. Passed 0.20 sec Start 401: plm-union-check -432/480 Test #337: plm-reg-roi-c ......................... Passed 0.75 sec +431/480 Test #395: plm-thumbnail-b-check ................. Passed 0.17 sec Start 404: plm-threshold-a-check -433/480 Test #395: plm-thumbnail-b-check ................. Passed 0.13 sec +432/480 Test #398: plm-thumbnail-c-check ................. Passed 0.19 sec Start 407: plm-threshold-b-check -434/480 Test #398: plm-thumbnail-c-check ................. Passed 0.10 sec +433/480 Test #401: plm-union-check ....................... Passed 0.23 sec Start 410: plm-threshold-c-check -435/480 Test #336: plm-reg-roi-b ......................... Passed 0.81 sec +434/480 Test #404: plm-threshold-a-check ................. Passed 0.22 sec Start 411: plm-warp-pointset-a -436/480 Test #401: plm-union-check ....................... Passed 0.11 sec +435/480 Test #407: plm-threshold-b-check ................. Passed 0.20 sec Start 412: plm-warp-pointset-b -437/480 Test #404: plm-threshold-a-check ................. Passed 0.11 sec +436/480 Test #167: plm-convert-dicom-donut-c ............. Passed 3.29 sec Start 413: plm-warp-pointset-c -438/480 Test #365: plm-compose-b-warp .................... Passed 0.66 sec +437/480 Test #336: plm-reg-roi-b ......................... Passed 1.71 sec Start 416: plm-warp-a-check -439/480 Test #410: plm-threshold-c-check ................. Passed 0.10 sec +438/480 Test #361: plm-compose-a-warp .................... Passed 1.28 sec Start 419: plm-warp-b-check-1 -440/480 Test #407: plm-threshold-b-check ................. Passed 0.15 sec +439/480 Test #410: plm-threshold-c-check ................. Passed 0.24 sec Start 421: plm-warp-b-check-2 -441/480 Test #419: plm-warp-b-check-1 .................... Passed 0.09 sec +440/480 Test #337: plm-reg-roi-c ......................... Passed 1.77 sec Start 424: plm-warp-c-check -442/480 Test #369: plm-compose-c-warp .................... Passed 0.76 sec +441/480 Test #369: plm-compose-c-warp .................... Passed 1.27 sec Start 427: plm-warp-d-check -443/480 Test #416: plm-warp-a-check ...................... Passed 0.16 sec +442/480 Test #419: plm-warp-b-check-1 .................... Passed 0.18 sec Start 430: plm-warp-g-check-1 -444/480 Test #167: plm-convert-dicom-donut-c ............. Passed 1.56 sec +443/480 Test #416: plm-warp-a-check ...................... Passed 0.24 sec Start 433: plm-warp-h-check-1 -445/480 Test #421: plm-warp-b-check-2 .................... Passed 0.13 sec +444/480 Test #421: plm-warp-b-check-2 .................... Passed 0.22 sec Start 436: plm-warp-i-check-1 -446/480 Test #424: plm-warp-c-check ...................... Passed 0.10 sec +445/480 Test #424: plm-warp-c-check ...................... Passed 0.21 sec Start 439: plm-xf-convert-c -447/480 Test #335: plm-reg-roi-a ......................... Passed 1.08 sec +446/480 Test #365: plm-compose-b-warp .................... Passed 1.49 sec Start 443: plm-xf-convert-d-warp-1-check -448/480 Test #427: plm-warp-d-check ...................... Passed 0.12 sec +447/480 Test #427: plm-warp-d-check ...................... Passed 0.22 sec Start 446: plm-xf-convert-d-warp-2-check -449/480 Test #430: plm-warp-g-check-1 .................... Passed 0.11 sec +448/480 Test #430: plm-warp-g-check-1 .................... Passed 0.20 sec Start 447: plm-xf-convert-e -450/480 Test #433: plm-warp-h-check-1 .................... Passed 0.11 sec +449/480 Test #433: plm-warp-h-check-1 .................... Passed 0.21 sec Start 448: plm-xf-convert-f -451/480 Test #436: plm-warp-i-check-1 .................... Passed 0.11 sec +450/480 Test #436: plm-warp-i-check-1 .................... Passed 0.21 sec Start 449: plm-xf-convert-g -452/480 Test #443: plm-xf-convert-d-warp-1-check ......... Passed 0.09 sec +451/480 Test #443: plm-xf-convert-d-warp-1-check ......... Passed 0.19 sec Start 452: xf-invert-vf-zero-1-check -453/480 Test #446: plm-xf-convert-d-warp-2-check ......... Passed 0.09 sec +452/480 Test #446: plm-xf-convert-d-warp-2-check ......... Passed 0.19 sec Start 455: xf-invert-vf-trans-1-check -454/480 Test #452: xf-invert-vf-zero-1-check ............. Passed 0.11 sec +453/480 Test #452: xf-invert-vf-zero-1-check ............. Passed 0.17 sec Start 457: xf-invert-vrs-a-check -455/480 Test #455: xf-invert-vf-trans-1-check ............ Passed 0.12 sec +454/480 Test #455: xf-invert-vf-trans-1-check ............ Passed 0.21 sec Start 459: xf-invert-vrs-b-check -456/480 Test #340: plm-reg-stiffness-a ................... Passed 1.32 sec +455/480 Test #335: plm-reg-roi-a ......................... Passed 2.60 sec Start 462: proton-dose-1-check -457/480 Test #457: xf-invert-vrs-a-check ................. Passed 0.11 sec +456/480 Test #457: xf-invert-vrs-a-check ................. Passed 0.23 sec Start 465: proton-dose-4a-check -458/480 Test #413: plm-warp-pointset-c ................... Passed 0.57 sec +457/480 Test #411: plm-warp-pointset-a ................... Passed 1.11 sec Start 468: proton-dose-4d-check -459/480 Test #459: xf-invert-vrs-b-check ................. Passed 0.13 sec +458/480 Test #459: xf-invert-vrs-b-check ................. Passed 0.21 sec Start 471: proton-dose-5a-check -460/480 Test #462: proton-dose-1-check ................... Passed 0.11 sec +459/480 Test #338: plm-reg-roi-d ......................... Passed 2.70 sec Start 474: proton-dose-5d-check -461/480 Test #412: plm-warp-pointset-b ................... Passed 0.65 sec +460/480 Test #462: proton-dose-1-check ................... Passed 0.18 sec Start 477: proton-dose-6a-check -462/480 Test #411: plm-warp-pointset-a ................... Passed 0.69 sec -463/480 Test #465: proton-dose-4a-check .................. Passed 0.09 sec -464/480 Test #468: proton-dose-4d-check .................. Passed 0.09 sec -465/480 Test #439: plm-xf-convert-c ...................... Passed 0.45 sec -466/480 Test #338: plm-reg-roi-d ......................... Passed 1.51 sec -467/480 Test #474: proton-dose-5d-check .................. Passed 0.06 sec -468/480 Test #471: proton-dose-5a-check .................. Passed 0.09 sec -469/480 Test #477: proton-dose-6a-check .................. Passed 0.07 sec -470/480 Test #448: plm-xf-convert-f ...................... Passed 0.58 sec -471/480 Test #447: plm-xf-convert-e ...................... Passed 0.62 sec -472/480 Test #449: plm-xf-convert-g ...................... Passed 0.64 sec -473/480 Test #339: plm-reg-roi-e ......................... Passed 1.89 sec -474/480 Test #171: plm-convert-prefix-fcsv ............... Passed 3.33 sec -475/480 Test #478: wed-a ................................. Passed 5.59 sec +461/480 Test #465: proton-dose-4a-check .................. Passed 0.19 sec +462/480 Test #474: proton-dose-5d-check .................. Passed 0.09 sec +463/480 Test #468: proton-dose-4d-check .................. Passed 0.19 sec +464/480 Test #413: plm-warp-pointset-c ................... Passed 1.17 sec +465/480 Test #477: proton-dose-6a-check .................. Passed 0.12 sec +466/480 Test #412: plm-warp-pointset-b ................... Passed 1.25 sec +467/480 Test #471: proton-dose-5a-check .................. Passed 0.19 sec +468/480 Test #439: plm-xf-convert-c ...................... Passed 1.19 sec +469/480 Test #340: plm-reg-stiffness-a ................... Passed 3.12 sec +470/480 Test #447: plm-xf-convert-e ...................... Passed 1.34 sec +471/480 Test #449: plm-xf-convert-g ...................... Passed 1.58 sec +472/480 Test #448: plm-xf-convert-f ...................... Passed 1.67 sec +473/480 Test #339: plm-reg-roi-e ......................... Passed 4.03 sec +474/480 Test #478: wed-a ................................. Passed 17.22 sec Start 479: wed-b Start 480: wed-c -476/480 Test #480: wed-c ................................. Passed 0.87 sec -477/480 Test #479: wed-b ................................. Passed 2.88 sec -478/480 Test #387: plm-sift-a ............................ Passed 12.23 sec +475/480 Test #171: plm-convert-prefix-fcsv ............... Passed 17.29 sec +476/480 Test #480: wed-c ................................. Passed 2.98 sec +477/480 Test #479: wed-b ................................. Passed 11.44 sec +478/480 Test #387: plm-sift-a ............................ Passed 54.06 sec Start 388: plm-sift-a-check-1 Start 389: plm-sift-a-check-2 -479/480 Test #388: plm-sift-a-check-1 .................... Passed 0.02 sec -480/480 Test #389: plm-sift-a-check-2 .................... Passed 0.02 sec +479/480 Test #388: plm-sift-a-check-1 .................... Passed 0.09 sec +480/480 Test #389: plm-sift-a-check-2 .................... Passed 0.10 sec 100% tests passed, 0 tests failed out of 480 -Total Test time (real) = 25.55 sec +Total Test time (real) = 86.50 sec make[2]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1' create-stamp debian/debhelper-build-stamp @@ -9927,7 +9962,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/plastimatch-1.7.4+dfsg.1' dh_auto_install - cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/plastimatch-1.7.4\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/plastimatch-1.7.4\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/plastimatch-1.7.4+dfsg.1 -B/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles/progress.marks @@ -9941,57 +9976,57 @@ make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/liblbfgs-1.9 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/inih-r29 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/specfun /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/libs/nkidecompress /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/sys /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/clp/CMakeFiles/plmclp.dir/build'. +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build -make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build -make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build -make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build +make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'libs/nkidecompress/CMakeFiles/nkidecompress.dir/build'. +make[4]: Nothing to be done for 'libs/devillard/CMakeFiles/devillard.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'libs/inih-r29/CMakeFiles/inih.dir/build'. +make[4]: Nothing to be done for 'libs/specfun/CMakeFiles/specfun.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'libs/devillard/CMakeFiles/devillard.dir/build'. +make[4]: Nothing to be done for 'libs/nkidecompress/CMakeFiles/nkidecompress.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 1%] Built target devillard make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 1%] Built target specfun make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'libs/specfun/CMakeFiles/specfun.dir/build'. +make[4]: Nothing to be done for 'libs/inih-r29/CMakeFiles/inih.dir/build'. +make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 2%] Built target nkidecompress +[ 2%] Built target lbfgs +[ 3%] Built target inih +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[4]: Nothing to be done for 'src/plastimatch/clp/CMakeFiles/plmclp.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 4%] Built target plmclp make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build -[ 1%] Built target plmclp -[ 2%] Built target nkidecompress -[ 3%] Built target devillard -[ 3%] Built target lbfgs -[ 3%] Built target specfun -[ 4%] Built target inih make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/sys/CMakeFiles/plmsys.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10021,19 +10056,19 @@ cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/reconstruct /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/dose /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 54%] Built target plmreconstruct make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/dose/CMakeFiles/plmdose.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 54%] Built target plmreconstruct [ 58%] Built target plmdose make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build @@ -10054,7 +10089,13 @@ make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/depend make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/depend make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/landmark_warp.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/drr.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/depend make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend @@ -10065,42 +10106,41 @@ make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/drr.dir/DependInfo.cmake --color= +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/landmark_warp.dir/DependInfo.cmake --color= +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/fdk.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/build +make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10108,40 +10148,47 @@ make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 77%] Built target landmark_diff make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build -make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build -[ 77%] Built target bragg_curve +make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/build +[ 77%] Built target landmark_diff +make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend +[ 77%] Built target bragg_curve +make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/fdk.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/cli/CMakeFiles/drr.dir/build.make src/plastimatch/cli/CMakeFiles/drr.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/fdk.dir/build'. -make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 78%] Built target fdk -make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend +make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bspline.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build -make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build +[ 79%] Built target bspline +make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend +make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build +make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build +make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10153,23 +10200,17 @@ make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 79%] Built target dlib_train -make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend +[ 80%] Built target dlib_train make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/demons.dir/build'. +make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 79%] Built target demons -make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -cd /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-1.7.4+dfsg.1 /build/plastimatch-1.7.4+dfsg.1/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= +[ 80%] Built target hnd_to_pfm make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bspline.dir/build'. +make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/demons.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 80%] Built target bspline +[ 80%] Built target demons make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build +make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10179,34 +10220,29 @@ make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/wed.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 80%] Built target shuffle_mha -[ 81%] Built target dicom_uid -[ 82%] Built target wed make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/drr.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/check_grad.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 81%] Built target dicom_uid +[ 81%] Built target shuffle_mha +[ 82%] Built target wed [ 82%] Built target drr [ 83%] Built target check_grad make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build'. +make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build'. -make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 83%] Built target hnd_to_pfm +[ 83%] Built target dicom_info [ 84%] Built target compute_distance -[ 84%] Built target dicom_info -make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' +[ 85%] Built target merge_vfs make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10215,7 +10251,6 @@ make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/group_add.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' -[ 85%] Built target merge_vfs make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10224,8 +10259,8 @@ make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' [ 86%] Built target xvi_archive [ 87%] Built target group_add -[ 88%] Built target landmark_warp -[ 89%] Built target sobp +[ 88%] Built target sobp +[ 89%] Built target landmark_warp make[4]: Entering directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/plastimatch.dir/build'. make[4]: Leaving directory '/build/plastimatch-1.7.4+dfsg.1/obj-x86_64-linux-gnu' @@ -10661,8 +10696,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'plastimatch' in '../plastimatch_1.7.4+dfsg.1-2_amd64.deb'. dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.7.4+dfsg.1-2_amd64.deb'. +dpkg-deb: building package 'plastimatch' in '../plastimatch_1.7.4+dfsg.1-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../plastimatch_1.7.4+dfsg.1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -10670,12 +10705,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3525613/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2339451 and its subdirectories -I: Current time: Wed Dec 8 03:29:30 -12 2021 -I: pbuilder-time-stamp: 1638977370 +I: removing directory /srv/workspace/pbuilder/3525613 and its subdirectories +I: Current time: Wed Jan 11 12:11:59 +14 2023 +I: pbuilder-time-stamp: 1673388719