Diff of the two buildlogs: -- --- b1/build.log 2021-12-17 08:57:38.763904928 +0000 +++ b2/build.log 2021-12-17 09:18:58.684032139 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jan 19 02:53:49 -12 2023 -I: pbuilder-time-stamp: 1674140029 +I: Current time: Fri Dec 17 22:57:40 +14 2021 +I: pbuilder-time-stamp: 1639731460 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Tue Feb 5 19:18:37 2019 -12 +gpgv: Signature made Wed Feb 6 21:18:37 2019 +14 gpgv: using RSA key 3AFA757FAC6EA11D2FF45DF088D24287A2D898B1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./unanimity_3.3.0+dfsg-2.1.dsc @@ -31,136 +31,170 @@ dpkg-source: info: applying do_not_refer_to_non-existing_images.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2685923/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.0.3(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='47473de4396149e09cf5bd267366d359' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2685923' - PS1='# ' - PS2='> ' + INVOCATION_ID=c6cd1f5d882b4613a6ab846e0ab755c3 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3089728 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.1O36T9Y4EX/pbuilderrc_5hSL --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.1O36T9Y4EX/b1 --logfile b1/build.log unanimity_3.3.0+dfsg-2.1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.1O36T9Y4EX/pbuilderrc_KDeU --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.1O36T9Y4EX/b2 --logfile b2/build.log unanimity_3.3.0+dfsg-2.1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5116 - -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 - -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore - -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat - -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp - -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod - -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown - -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp - -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash - -rwxr-xr-x 1 root root 109408 Feb 28 2019 date - -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd - -rwxr-xr-x 1 root root 93744 Feb 28 2019 df - -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir - -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg - lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname - -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo - -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep - -rwxr-xr-x 1 root root 35424 Feb 28 2019 false - -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep - -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt - -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount - -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep - -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip - -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe - -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip - -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname - -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln - -rwxr-xr-x 1 root root 56760 Jul 26 2018 login - -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls - -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk - -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir - -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod - -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp - -rwxr-xr-x 1 root root 43008 Jan 9 2019 more - -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount - -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint - -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv - lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd - lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash - -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink - -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm - -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir - -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 10 16:21 sh -> dash - -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep - -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty - -rwsr-xr-x 1 root root 63568 Jan 9 2019 su - -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync - -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar - -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile - -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch - -rwxr-xr-x 1 root root 35424 Feb 28 2019 true - -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server - -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount - -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname - -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress - -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir - -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl - -rwxr-xr-x 1 root root 946 Jan 21 2019 which - lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat - -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp - -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff - -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep - -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep - -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce - -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep - -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless - -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore - -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew -I: user script /srv/workspace/pbuilder/2685923/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1168776 Apr 18 2019 bash + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzcat + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 11 2019 bzip2 + -rwxr-xr-x 1 root root 14328 Jul 11 2019 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore + -rwxr-xr-x 1 root root 43744 Mar 1 2019 cat + -rwxr-xr-x 1 root root 64320 Mar 1 2019 chgrp + -rwxr-xr-x 1 root root 64288 Mar 1 2019 chmod + -rwxr-xr-x 1 root root 72512 Mar 1 2019 chown + -rwxr-xr-x 1 root root 146880 Mar 1 2019 cp + -rwxr-xr-x 1 root root 121464 Jan 18 2019 dash + -rwxr-xr-x 1 root root 109408 Mar 1 2019 date + -rwxr-xr-x 1 root root 76712 Mar 1 2019 dd + -rwxr-xr-x 1 root root 93744 Mar 1 2019 df + -rwxr-xr-x 1 root root 138856 Mar 1 2019 dir + -rwxr-xr-x 1 root root 84288 Jan 10 2019 dmesg + lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname + -rwxr-xr-x 1 root root 39520 Mar 1 2019 echo + -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep + -rwxr-xr-x 1 root root 35424 Mar 1 2019 false + -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep + -rwxr-xr-x 1 root root 68880 Jan 10 2019 findmnt + -rwsr-xr-x 1 root root 34896 Apr 23 2020 fusermount + -rwxr-xr-x 1 root root 198976 Jan 8 2019 grep + -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip + -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe + -rwxr-xr-x 1 root root 98048 Jan 6 2019 gzip + -rwxr-xr-x 1 root root 26696 Sep 27 2018 hostname + -rwxr-xr-x 1 root root 68552 Mar 1 2019 ln + -rwxr-xr-x 1 root root 56760 Jul 27 2018 login + -rwxr-xr-x 1 root root 138856 Mar 1 2019 ls + -rwxr-xr-x 1 root root 108624 Jan 10 2019 lsblk + -rwxr-xr-x 1 root root 89088 Mar 1 2019 mkdir + -rwxr-xr-x 1 root root 68544 Mar 1 2019 mknod + -rwxr-xr-x 1 root root 43808 Mar 1 2019 mktemp + -rwxr-xr-x 1 root root 43008 Jan 10 2019 more + -rwsr-xr-x 1 root root 51280 Jan 10 2019 mount + -rwxr-xr-x 1 root root 14408 Jan 10 2019 mountpoint + -rwxr-xr-x 1 root root 138728 Mar 1 2019 mv + lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 39616 Mar 1 2019 pwd + lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash + -rwxr-xr-x 1 root root 47776 Mar 1 2019 readlink + -rwxr-xr-x 1 root root 68416 Mar 1 2019 rm + -rwxr-xr-x 1 root root 47776 Mar 1 2019 rmdir + -rwxr-xr-x 1 root root 23312 Jan 22 2019 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Dec 17 22:57 sh -> bash + lrwxrwxrwx 1 root root 4 Nov 8 11:58 sh.distrib -> dash + -rwxr-xr-x 1 root root 39552 Mar 1 2019 sleep + -rwxr-xr-x 1 root root 80672 Mar 1 2019 stty + -rwsr-xr-x 1 root root 63568 Jan 10 2019 su + -rwxr-xr-x 1 root root 35488 Mar 1 2019 sync + -rwxr-xr-x 1 root root 445560 Apr 24 2019 tar + -rwxr-xr-x 1 root root 14440 Jan 22 2019 tempfile + -rwxr-xr-x 1 root root 97152 Mar 1 2019 touch + -rwxr-xr-x 1 root root 35424 Mar 1 2019 true + -rwxr-xr-x 1 root root 14328 Apr 23 2020 ulockmgr_server + -rwsr-xr-x 1 root root 34888 Jan 10 2019 umount + -rwxr-xr-x 1 root root 39584 Mar 1 2019 uname + -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress + -rwxr-xr-x 1 root root 138856 Mar 1 2019 vdir + -rwxr-xr-x 1 root root 34896 Jan 10 2019 wdctl + -rwxr-xr-x 1 root root 946 Jan 22 2019 which + lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat + -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp + -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff + -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep + -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep + -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce + -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep + -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless + -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore + -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -338,7 +372,7 @@ Get: 116 http://deb.debian.org/debian buster/main amd64 python-setuptools all 40.8.0-1 [382 kB] Get: 117 http://deb.debian.org/debian buster/main amd64 swig3.0 amd64 3.0.12-2 [1397 kB] Get: 118 http://deb.debian.org/debian buster/main amd64 swig amd64 3.0.12-2 [310 kB] -Fetched 111 MB in 6s (18.0 MB/s) +Fetched 111 MB in 3s (33.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) @@ -840,7 +874,8 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/unanimity-3.3.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../unanimity_3.3.0+dfsg-2.1_source.changes +hostname: Name or service not known +I: Running cd /build/unanimity-3.3.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../unanimity_3.3.0+dfsg-2.1_source.changes dpkg-buildpackage: info: source package unanimity dpkg-buildpackage: info: source version 3.3.0+dfsg-2.1 dpkg-buildpackage: info: source distribution unstable @@ -935,16 +970,16 @@ touch config-main make[1]: Leaving directory '/build/unanimity-3.3.0+dfsg' dh_auto_build -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build - cd build && make -j16 "INSTALL=install --strip-program=true" + cd build && make -j15 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/unanimity-3.3.0+dfsg/build' /usr/bin/cmake -S/build/unanimity-3.3.0+dfsg -B/build/unanimity-3.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/unanimity-3.3.0+dfsg/build/CMakeFiles /build/unanimity-3.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make -f src/CMakeFiles/unanimity.dir/build.make src/CMakeFiles/unanimity.dir/depend +make -f src/CMakeFiles/cc2.dir/build.make src/CMakeFiles/cc2.dir/depend make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/unanimity.dir/DependInfo.cmake --color= -make -f src/CMakeFiles/cc2.dir/build.make src/CMakeFiles/cc2.dir/depend make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/cc2.dir/DependInfo.cmake --color= Scanning dependencies of target unanimity @@ -954,165 +989,202 @@ Scanning dependencies of target cc2 make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' make -f src/CMakeFiles/cc2.dir/build.make src/CMakeFiles/cc2.dir/build +[ 1%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/ConsensusModelFactory.cpp.o +[ 2%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Consensus.cpp.o +[ 3%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Filters.cpp.o +[ 4%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Input.cpp.o +[ 6%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/GenomicConsensus.cpp.o make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -[ 1%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Consensus.cpp.o +[ 7%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/IPoaModel.cpp.o +[ 8%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Intervals.cpp.o +[ 9%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Output.cpp.o +[ 11%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Settings.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -std=c++14 -o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Consensus.cpp.o -c /build/unanimity-3.3.0+dfsg/src/genomicconsensus/experimental/Consensus.cpp -[ 2%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/ConsensusModelFactory.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -std=c++14 -o CMakeFiles/unanimity.dir/genomicconsensus/experimental/ConsensusModelFactory.cpp.o -c /build/unanimity-3.3.0+dfsg/src/genomicconsensus/experimental/ConsensusModelFactory.cpp -[ 3%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Filters.cpp.o -[ 4%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/GenomicConsensus.cpp.o +[ 12%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Sorting.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall 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src/CMakeFiles/cc2.dir/__/generated/UnanimityGitHash.cpp.o +[ 14%] Building CXX object src/CMakeFiles/cc2.dir/__/generated/UnanimityVersion.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -std=c++14 -o CMakeFiles/unanimity.dir/genomicconsensus/experimental/IPoaModel.cpp.o -c /build/unanimity-3.3.0+dfsg/src/genomicconsensus/experimental/IPoaModel.cpp -[ 7%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Intervals.cpp.o -[ 8%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Input.cpp.o -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ 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src/CMakeFiles/cc2.dir/models/P6C4NoCov_Model.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/models/P6C4NoCov_Model.cpp.o -c /build/unanimity-3.3.0+dfsg/src/models/P6C4NoCov_Model.cpp -[ 27%] Building CXX object src/CMakeFiles/cc2.dir/models/PwSnrAModelForm.cpp.o +[ 30%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/arrow/ArrowModel.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 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/build/unanimity-3.3.0+dfsg/src/Timer.cpp +[ 55%] Building CXX object src/CMakeFiles/unanimity.dir/Utility.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -std=c++14 -o CMakeFiles/unanimity.dir/Utility.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Utility.cpp +[ 56%] Building CXX object src/CMakeFiles/unanimity.dir/ConsensusSettings.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/poa/PoaAlignmentMatrix.cpp.o -c /build/unanimity-3.3.0+dfsg/src/poa/PoaAlignmentMatrix.cpp -[ 37%] Building CXX object src/CMakeFiles/cc2.dir/poa/PoaConsensus.cpp.o +[ 60%] Building CXX object src/CMakeFiles/cc2.dir/poa/PoaConsensus.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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src/CMakeFiles/cc2.dir/poa/PoaGraphImpl.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/poa/PoaGraphImpl.cpp.o -c /build/unanimity-3.3.0+dfsg/src/poa/PoaGraphImpl.cpp -[ 40%] Building CXX object src/CMakeFiles/cc2.dir/poa/PoaGraphTraversals.cpp.o +[ 64%] Building CXX object src/CMakeFiles/cc2.dir/poa/PoaGraphTraversals.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/poa/PoaGraphTraversals.cpp.o -c /build/unanimity-3.3.0+dfsg/src/poa/PoaGraphTraversals.cpp -[ 41%] Building CXX object src/CMakeFiles/cc2.dir/poa/RangeFinder.cpp.o +[ 65%] Building CXX object src/CMakeFiles/cc2.dir/poa/RangeFinder.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/poa/RangeFinder.cpp.o -c /build/unanimity-3.3.0+dfsg/src/poa/RangeFinder.cpp -[ 43%] Building CXX object src/CMakeFiles/cc2.dir/Coverage.cpp.o +[ 66%] Building CXX object src/CMakeFiles/cc2.dir/Coverage.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/Coverage.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Coverage.cpp -[ 44%] Building CXX object src/CMakeFiles/cc2.dir/EasyReadScorer.cpp.o +[ 67%] Building CXX object src/CMakeFiles/cc2.dir/EasyReadScorer.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/EasyReadScorer.cpp.o -c /build/unanimity-3.3.0+dfsg/src/EasyReadScorer.cpp -[ 45%] Building CXX object src/CMakeFiles/cc2.dir/Evaluator.cpp.o +[ 69%] Building CXX object src/CMakeFiles/cc2.dir/Evaluator.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/Evaluator.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Evaluator.cpp -[ 46%] Building CXX object src/CMakeFiles/unanimity.dir/genomicconsensus/experimental/Settings.cpp.o -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -std=c++14 -o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Settings.cpp.o -c /build/unanimity-3.3.0+dfsg/src/genomicconsensus/experimental/Settings.cpp -[ 48%] Building CXX object src/CMakeFiles/cc2.dir/EvaluatorImpl.cpp.o +[ 70%] Building CXX object src/CMakeFiles/cc2.dir/EvaluatorImpl.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/EvaluatorImpl.cpp.o -c /build/unanimity-3.3.0+dfsg/src/EvaluatorImpl.cpp -[ 49%] Building CXX object src/CMakeFiles/cc2.dir/Integrator.cpp.o +[ 71%] Building CXX object src/CMakeFiles/cc2.dir/Integrator.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/Integrator.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Integrator.cpp -[ 50%] Building CXX object src/CMakeFiles/cc2.dir/IntervalMask.cpp.o +[ 72%] Building CXX object src/CMakeFiles/cc2.dir/IntervalMask.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/IntervalMask.cpp.o -c /build/unanimity-3.3.0+dfsg/src/IntervalMask.cpp -[ 51%] Building CXX object src/CMakeFiles/cc2.dir/ModelConfig.cpp.o +[ 74%] Building CXX object src/CMakeFiles/cc2.dir/ModelConfig.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/ModelConfig.cpp.o -c /build/unanimity-3.3.0+dfsg/src/ModelConfig.cpp -[ 53%] Building CXX object src/CMakeFiles/cc2.dir/ModelFactory.cpp.o +[ 75%] Building CXX object src/CMakeFiles/cc2.dir/ModelFactory.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/ModelFactory.cpp.o -c /build/unanimity-3.3.0+dfsg/src/ModelFactory.cpp -[ 54%] Building CXX object src/CMakeFiles/cc2.dir/ModelFormFactory.cpp.o +[ 76%] Building CXX object src/CMakeFiles/cc2.dir/ModelFormFactory.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/ModelFormFactory.cpp.o -c /build/unanimity-3.3.0+dfsg/src/ModelFormFactory.cpp -[ 55%] Building CXX object src/CMakeFiles/cc2.dir/ModelSelection.cpp.o +[ 77%] Building CXX object src/CMakeFiles/cc2.dir/ModelSelection.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/ModelSelection.cpp.o -c /build/unanimity-3.3.0+dfsg/src/ModelSelection.cpp -[ 56%] Building CXX object src/CMakeFiles/cc2.dir/Mutation.cpp.o +[ 79%] Building CXX object src/CMakeFiles/cc2.dir/Mutation.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/Mutation.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Mutation.cpp -[ 58%] Building CXX object src/CMakeFiles/cc2.dir/Polish.cpp.o +[ 80%] Building CXX object src/CMakeFiles/cc2.dir/Polish.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/cc2.dir/Polish.cpp.o -c /build/unanimity-3.3.0+dfsg/src/Polish.cpp -[ 59%] Building CXX object src/CMakeFiles/cc2.dir/PolishResult.cpp.o +[ 81%] Building CXX object src/CMakeFiles/cc2.dir/PolishResult.cpp.o cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. 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Leaving directory '/build/unanimity-3.3.0+dfsg/build' +make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' +make -f src/CMakeFiles/arrow.dir/build.make src/CMakeFiles/arrow.dir/build +[ 90%] Generating ConsensusCore2_wrap.cxx cd /build/unanimity-3.3.0+dfsg/build/swig && swig -Wextra -c++ -python -builtin -module ConsensusCore2 -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -o /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx -outdir /build/unanimity-3.3.0+dfsg/build/swig/lib /build/unanimity-3.3.0+dfsg/swig/ConsensusCore2.i +Scanning dependencies of target gcpp +make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' +make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' +make -f src/CMakeFiles/gcpp.dir/build.make src/CMakeFiles/gcpp.dir/build +make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' +[ 91%] Building CXX object src/CMakeFiles/ccs.dir/main/ccs.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/ccs.dir/main/ccs.cpp.o -c /build/unanimity-3.3.0+dfsg/src/main/ccs.cpp +[ 92%] Building CXX object src/CMakeFiles/arrow.dir/main/arrow.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/arrow.dir/main/arrow.cpp.o -c /build/unanimity-3.3.0+dfsg/src/main/arrow.cpp +[ 93%] Building CXX object src/CMakeFiles/gcpp.dir/main/gcpp.cpp.o +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/gcpp.dir/main/gcpp.cpp.o -c /build/unanimity-3.3.0+dfsg/src/main/gcpp.cpp cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/swig /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/swig /build/unanimity-3.3.0+dfsg/build/swig/CMakeFiles/_ConsensusCore2.dir/DependInfo.cmake --color= Scanning dependencies of target _ConsensusCore2 make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' make -f swig/CMakeFiles/_ConsensusCore2.dir/build.make swig/CMakeFiles/_ConsensusCore2.dir/build make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -[ 90%] Building CXX object swig/CMakeFiles/_ConsensusCore2.dir/ConsensusCore2_wrap.cxx.o +[ 95%] Building CXX object swig/CMakeFiles/_ConsensusCore2.dir/ConsensusCore2_wrap.cxx.o cd /build/unanimity-3.3.0+dfsg/build/swig && /usr/bin/c++ -D_ConsensusCore2_EXPORTS -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -isystem /usr/include/python2.7 -isystem /usr/lib/python2.7/dist-packages/numpy/core/include -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -fPIC -std=c++14 -o CMakeFiles/_ConsensusCore2.dir/ConsensusCore2_wrap.cxx.o -c /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx +[ 96%] Linking CXX executable ../gcpp +cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gcpp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -pthread -rdynamic CMakeFiles/gcpp.dir/main/gcpp.cpp.o -o ../gcpp -ldl libunanimity.a libcc2.a -lpbbam -Wl,-Bstatic -lpbcopper -Wl,-Bdynamic /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx: In function ‘PyObject* _wrap_delete_Mutation(PyObject*, PyObject*)’: /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx:32863:14: warning: deleting object of polymorphic class type ‘PacBio::Consensus::Mutation’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] delete arg1; @@ -1265,43 +1337,6 @@ /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx:4619:37: required from ‘int swig::asptr(PyObject*, Type**) [with Type = std::vector >; PyObject = _object]’ /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx:35777:34: required from here /build/unanimity-3.3.0+dfsg/build/swig/ConsensusCore2_wrap.cxx:4690:4: warning: deleting object of polymorphic class type ‘PacBio::Consensus::ScoredMutation’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] -[ 91%] Linking CXX static library libunanimity.a -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/cmake -P CMakeFiles/unanimity.dir/cmake_clean_target.cmake -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/unanimity.dir/link.txt --verbose=1 -/usr/bin/ar qc libunanimity.a CMakeFiles/unanimity.dir/genomicconsensus/experimental/Consensus.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/ConsensusModelFactory.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Filters.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/GenomicConsensus.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/IPoaModel.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Input.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Intervals.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Output.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Settings.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Sorting.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/Workflow.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/arrow/ArrowModel.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/io/FastaWriter.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/io/FastqWriter.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/io/GffWriter.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/io/VcfWriter.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/plurality/PluralityModel.cpp.o CMakeFiles/unanimity.dir/genomicconsensus/experimental/poa/PoaModel.cpp.o CMakeFiles/unanimity.dir/ChemistryMapping.cpp.o CMakeFiles/unanimity.dir/ChemistryTriple.cpp.o CMakeFiles/unanimity.dir/Interval.cpp.o CMakeFiles/unanimity.dir/ReadId.cpp.o CMakeFiles/unanimity.dir/SparsePoa.cpp.o CMakeFiles/unanimity.dir/SubreadResultCounter.cpp.o CMakeFiles/unanimity.dir/Timer.cpp.o CMakeFiles/unanimity.dir/Utility.cpp.o CMakeFiles/unanimity.dir/ConsensusSettings.cpp.o -/usr/bin/ranlib libunanimity.a -make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -[ 91%] Built target unanimity -make -f src/CMakeFiles/ccs.dir/build.make src/CMakeFiles/ccs.dir/depend -make -f src/CMakeFiles/arrow.dir/build.make src/CMakeFiles/arrow.dir/depend -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/ccs.dir/DependInfo.cmake --color= -make -f src/CMakeFiles/gcpp.dir/build.make src/CMakeFiles/gcpp.dir/depend -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/arrow.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/gcpp.dir/DependInfo.cmake --color= -Scanning dependencies of target gcpp -Scanning dependencies of target ccs -make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -make -f src/CMakeFiles/ccs.dir/build.make src/CMakeFiles/ccs.dir/build -make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -Scanning dependencies of target arrow -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -make -f src/CMakeFiles/gcpp.dir/build.make src/CMakeFiles/gcpp.dir/build -make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -make -f src/CMakeFiles/arrow.dir/build.make src/CMakeFiles/arrow.dir/build -make[3]: Entering directory '/build/unanimity-3.3.0+dfsg/build' -[ 92%] Building CXX object src/CMakeFiles/arrow.dir/main/arrow.cpp.o -cd 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-Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/gcpp.dir/main/gcpp.cpp.o -c /build/unanimity-3.3.0+dfsg/src/main/gcpp.cpp -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/c++ -I/build/unanimity-3.3.0+dfsg/include -I/build/unanimity-3.3.0+dfsg/build/generated -I/build/unanimity-3.3.0+dfsg/src -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -fPIC -std=c++14 -o CMakeFiles/ccs.dir/main/ccs.cpp.o -c /build/unanimity-3.3.0+dfsg/src/main/ccs.cpp -[ 96%] Linking CXX executable ../gcpp -cd /build/unanimity-3.3.0+dfsg/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gcpp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/unanimity-3.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-unused-variable -Wno-unused-local-typedefs -pthread -rdynamic CMakeFiles/gcpp.dir/main/gcpp.cpp.o -o ../gcpp -ldl libunanimity.a libcc2.a -lpbbam -Wl,-Bstatic -lpbcopper -Wl,-Bdynamic make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' [ 96%] Built target gcpp [ 97%] Linking CXX executable ../arrow @@ -1612,7 +1647,7 @@ dh_testroot -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_prep -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_auto_install -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build - cd build && make -j16 install DESTDIR=/build/unanimity-3.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build && make -j15 install DESTDIR=/build/unanimity-3.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/unanimity-3.3.0+dfsg/build' /usr/bin/cmake -S/build/unanimity-3.3.0+dfsg -B/build/unanimity-3.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/unanimity-3.3.0+dfsg/build/CMakeFiles /build/unanimity-3.3.0+dfsg/build/CMakeFiles/progress.marks @@ -1631,10 +1666,10 @@ make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Nothing to be done for 'src/CMakeFiles/unanimity.dir/build'. make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' +[ 34%] Built target unanimity make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Nothing to be done for 'src/CMakeFiles/cc2.dir/build'. make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -[ 34%] Built target unanimity [ 88%] Built target cc2 make -f src/CMakeFiles/ccs.dir/build.make src/CMakeFiles/ccs.dir/depend make -f src/CMakeFiles/arrow.dir/build.make src/CMakeFiles/arrow.dir/depend @@ -1712,15 +1747,15 @@ dh_strip -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_makeshlibs -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_shlibdeps -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/unanimity/usr/bin/gcpp debian/unanimity/usr/bin/ccs were not linked against libdl.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/unanimity/usr/bin/ccs debian/unanimity/usr/bin/gcpp were not linked against libdl.so.2 (they use none of the library's symbols) dh_installdeb -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_gencontrol -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dpkg-gencontrol: warning: Depends field of package unanimity: substitution variable ${python:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package unanimity: substitution variable ${python:Depends} used, but is not defined dh_md5sums -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_builddeb -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build -dpkg-deb: building package 'unanimity' in '../unanimity_3.3.0+dfsg-2.1_amd64.deb'. dpkg-deb: building package 'unanimity-dbgsym' in '../unanimity-dbgsym_3.3.0+dfsg-2.1_amd64.deb'. +dpkg-deb: building package 'unanimity' in '../unanimity_3.3.0+dfsg-2.1_amd64.deb'. dh binary-arch \ --package=python-consensuscore2 \ --no-package=unanimity \ @@ -1804,8 +1839,8 @@ dpkg-gencontrol: warning: package python-consensuscore2: substitution variable ${python:Versions} unused, but is defined dh_md5sums -a -O--package=python-consensuscore2 -O--no-package=unanimity -O--buildsystem=pybuild dh_builddeb -a -O--package=python-consensuscore2 -O--no-package=unanimity -O--buildsystem=pybuild -dpkg-deb: building package 'python-consensuscore2' in '../python-consensuscore2_3.3.0+dfsg-2.1_amd64.deb'. dpkg-deb: building package 'python-consensuscore2-dbgsym' in '../python-consensuscore2-dbgsym_3.3.0+dfsg-2.1_amd64.deb'. +dpkg-deb: building package 'python-consensuscore2' in '../python-consensuscore2_3.3.0+dfsg-2.1_amd64.deb'. make[1]: Leaving directory '/build/unanimity-3.3.0+dfsg' Use of uninitialized value in numeric gt (>) at /usr/bin/dh line 821. dh binary \ @@ -1823,7 +1858,7 @@ dh_testroot -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_prep -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_auto_install -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build - cd build && make -j16 install DESTDIR=/build/unanimity-3.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd build && make -j15 install DESTDIR=/build/unanimity-3.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/unanimity-3.3.0+dfsg/build' /usr/bin/cmake -S/build/unanimity-3.3.0+dfsg -B/build/unanimity-3.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/unanimity-3.3.0+dfsg/build/CMakeFiles /build/unanimity-3.3.0+dfsg/build/CMakeFiles/progress.marks @@ -1849,10 +1884,10 @@ [ 88%] Built target cc2 make -f src/CMakeFiles/ccs.dir/build.make src/CMakeFiles/ccs.dir/depend make -f src/CMakeFiles/arrow.dir/build.make src/CMakeFiles/arrow.dir/depend -make -f src/CMakeFiles/gcpp.dir/build.make src/CMakeFiles/gcpp.dir/depend -make -f swig/CMakeFiles/_ConsensusCore2.dir/build.make swig/CMakeFiles/_ConsensusCore2.dir/depend make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/ccs.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/gcpp.dir/build.make src/CMakeFiles/gcpp.dir/depend +make -f swig/CMakeFiles/_ConsensusCore2.dir/build.make swig/CMakeFiles/_ConsensusCore2.dir/depend make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' cd /build/unanimity-3.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/unanimity-3.3.0+dfsg /build/unanimity-3.3.0+dfsg/src /build/unanimity-3.3.0+dfsg/build /build/unanimity-3.3.0+dfsg/build/src /build/unanimity-3.3.0+dfsg/build/src/CMakeFiles/arrow.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' @@ -1872,16 +1907,16 @@ make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Nothing to be done for 'src/CMakeFiles/ccs.dir/build'. make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' +[ 93%] Built target ccs make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Nothing to be done for 'src/CMakeFiles/arrow.dir/build'. make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' make -f swig/CMakeFiles/_ConsensusCore2.dir/build.make swig/CMakeFiles/_ConsensusCore2.dir/build +[ 96%] Built target arrow make[4]: Entering directory '/build/unanimity-3.3.0+dfsg/build' make[4]: Nothing to be done for 'swig/CMakeFiles/_ConsensusCore2.dir/build'. make[4]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' -[ 93%] Built target ccs -[ 96%] Built target arrow [100%] Built target _ConsensusCore2 make[3]: Leaving directory '/build/unanimity-3.3.0+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/unanimity-3.3.0+dfsg/build/CMakeFiles 0 @@ -1930,8 +1965,8 @@ dpkg-gencontrol: warning: Depends field of package unanimity: substitution variable ${python:Depends} used, but is not defined dh_md5sums -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build dh_builddeb -a -O--package=unanimity -O--no-package=python-consensuscore2 -O--buildsystem=cmake -O--builddirectory=build -dpkg-deb: building package 'unanimity' in '../unanimity_3.3.0+dfsg-2.1_amd64.deb'. dpkg-deb: building package 'unanimity-dbgsym' in '../unanimity-dbgsym_3.3.0+dfsg-2.1_amd64.deb'. +dpkg-deb: building package 'unanimity' in '../unanimity_3.3.0+dfsg-2.1_amd64.deb'. dh binary-arch \ --package=python-consensuscore2 \ --no-package=unanimity \ @@ -2024,12 +2059,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3089728/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2685923 and its subdirectories -I: Current time: Thu Jan 19 03:20:45 -12 2023 -I: pbuilder-time-stamp: 1674141645 +I: removing directory /srv/workspace/pbuilder/3089728 and its subdirectories +I: Current time: Fri Dec 17 23:18:58 +14 2021 +I: pbuilder-time-stamp: 1639732738