Diff of the two buildlogs: -- --- b1/build.log 2020-05-10 06:11:55.586150238 +0000 +++ b2/build.log 2020-05-10 06:13:15.416576571 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat May 9 18:01:45 -12 2020 -I: pbuilder-time-stamp: 1589090505 +I: Current time: Sun Jun 13 02:34:56 +14 2021 +I: pbuilder-time-stamp: 1623501296 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Fri Aug 24 01:15:30 2018 -12 +gpgv: Signature made Sat Aug 25 03:15:30 2018 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -35,6 +35,18 @@ dpkg-source: info: applying fix-format-codes.patch I: using fakeroot in build. I: Installing the build-deps +I: user script /srv/workspace/pbuilder/11022/tmp/hooks/D01_modify_environment starting +debug: Running on profitbricks-build6-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/11022/tmp/hooks/D01_modify_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -277,7 +289,7 @@ Get: 197 http://deb.debian.org/debian buster/main i386 libwxgtk3.0-0v5 i386 3.0.4+dfsg-8 [4694 kB] Get: 198 http://deb.debian.org/debian buster/main i386 wx-common i386 3.0.4+dfsg-8 [180 kB] Get: 199 http://deb.debian.org/debian buster/main i386 libwxgtk3.0-dev i386 3.0.4+dfsg-8 [138 kB] -Fetched 91.8 MB in 45s (2045 kB/s) +Fetched 91.8 MB in 1s (66.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) @@ -1109,7 +1121,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/gentle-1.9+cvs20100605+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/gentle-1.9+cvs20100605+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package gentle dpkg-buildpackage: info: source version 1.9+cvs20100605+dfsg1-7 dpkg-buildpackage: info: source distribution unstable @@ -1189,7 +1201,7 @@ Debug Disabled dh_auto_build - make -j10 + make -j18 make[1]: Entering directory '/build/gentle-1.9+cvs20100605+dfsg1' g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TXMLfile.o TXMLfile.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TVectorTree.o TVectorTree.cpp @@ -1209,7 +1221,6 @@ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TPrimer.o TPrimer.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TPrimerDialog.o TPrimerDialog.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TPDB.o TPDB.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TLigationDialog.o TLigationDialog.cpp TRestrictionEditor.cpp: In function 'bool operator<(TREcache, TREcache)': TRestrictionEditor.cpp:39:1: warning: control reaches end of non-void function [-Wreturn-type] } @@ -1218,6 +1229,7 @@ TRestrictionEditor.cpp:47:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TLigationDialog.o TLigationDialog.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TMainTree.o TMainTree.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o todo.o todo.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TItemEditDialog.o TItemEditDialog.cpp @@ -1230,6 +1242,12 @@ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeRestriction.o SequenceTypeRestriction.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypePlot.o SequenceTypePlot.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeFeature.o SequenceTypeFeature.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeDNA.o SequenceTypeDNA.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAlign.o SequenceTypeAlign.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeABI.o SequenceTypeABI.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAA.o SequenceTypeAA.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceCanvas.o SequenceCanvas.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SendHTTP.o SendHTTP.cpp SequenceTypes.cpp: In member function 'virtual int SeqPrimer::arrange_direct(int)': SequenceTypes.cpp:88:5: warning: no return statement in function returning non-void [-Wreturn-type] } @@ -1255,26 +1273,27 @@ /usr/include/wx-3.0/wx/menuitem.h:185:13: note: declared here inline void wxMenuItemBase::SetText(const wxString& text) { SetItemLabel(text); } ^~~~~~~~~~~~~~ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeDNA.o SequenceTypeDNA.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAlign.o SequenceTypeAlign.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeABI.o SequenceTypeABI.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAA.o SequenceTypeAA.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceCanvas.o SequenceCanvas.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SendHTTP.o SendHTTP.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o RestrictionEnzymes.o RestrictionEnzymes.cpp -SequenceTypeAA.cpp: In member function 'virtual int SeqAA::arrange(int)': -SequenceTypeAA.cpp:23:18: warning: control reaches end of non-void function [-Wreturn-type] - wxMessageBox ( _T("One has to wonder...1") ) ; - ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ProgramOptionsDialog.o ProgramOptionsDialog.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PlasmidCanvasLinear.o PlasmidCanvasLinear.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PrimerDesign.o PrimerDesign.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PlasmidCanvasHandlers.o PlasmidCanvasHandlers.cpp +SequenceTypeAA.cpp: In member function 'virtual int SeqAA::arrange(int)': +SequenceTypeAA.cpp:23:18: warning: control reaches end of non-void function [-Wreturn-type] + wxMessageBox ( _T("One has to wonder...1") ) ; + ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PlasmidCanvasCircular.o PlasmidCanvasCircular.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PlasmidCanvas.o PlasmidCanvas.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o MyFrame.o MyFrame.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o MyChild.o MyChild.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o MiscDialogs.o MiscDialogs.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ManageDatabase.o ManageDatabase.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o main.o main.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o GenBank.o GenBank.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o FindSequenceDialog.o FindSequenceDialog.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalNCBI.o ExternalNCBI.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalInterface.o ExternalInterface.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalBLAST.o ExternalBLAST.cpp PrimerDesign.cpp: In member function 'void TPrimerDesign::initme()': PrimerDesign.cpp:419:36: warning: 'wxToolBarToolBase* wxToolBarBase::AddTool(int, const wxBitmap&, const wxString&, const wxString&)' is deprecated [-Wdeprecated-declarations] txt("b_import_primer") ) ; @@ -1344,6 +1363,7 @@ PlasmidCanvasHandlers.cpp:362:5: warning: control reaches end of non-void function [-Wreturn-type] } ^ +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ChildBase.o ChildBase.cpp MyFrame.cpp: In member function 'virtual void MyFrame::addTool(wxToolBar*, int)': MyFrame.cpp:1227:30: warning: 'wxToolBarToolBase* wxToolBarBase::AddTool(int, const wxBitmap&, const wxString&, const wxString&)' is deprecated [-Wdeprecated-declarations] txt("m_new_sequence") ) ; @@ -1592,14 +1612,8 @@ /usr/include/wx-3.0/wx/menuitem.h:185:13: note: declared here inline void wxMenuItemBase::SetText(const wxString& text) { SetItemLabel(text); } ^~~~~~~~~~~~~~ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ManageDatabase.o ManageDatabase.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o main.o main.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o GenBank.o GenBank.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o FindSequenceDialog.o FindSequenceDialog.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalNCBI.o ExternalNCBI.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalInterface.o ExternalInterface.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ExternalBLAST.o ExternalBLAST.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ChildBase.o ChildBase.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o CoolCanvas.o CoolCanvas.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o AminoAcids.o AminoAcids.cpp ExternalBLAST.cpp: In member function 'virtual void EIpanel::process_blast()': ExternalBLAST.cpp:183:69: warning: 'wxThreadError wxThreadHelper::Create(unsigned int)' is deprecated [-Wdeprecated-declarations] if ( !blast_thread || wxTHREAD_NO_ERROR != blast_thread->Create() ) @@ -1612,8 +1626,6 @@ /usr/include/wx-3.0/wx/thread.h:760:22: note: declared here inline wxThreadError wxThreadHelper::Create(unsigned int stackSize) ^~~~~~~~~~~~~~ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o CoolCanvas.o CoolCanvas.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o AminoAcids.o AminoAcids.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o Alignment.o Alignment.cpp Alignment.cpp:9: warning: "USE_EXTERNAL_CLUSTALW" redefined #define USE_EXTERNAL_CLUSTALW @@ -1643,6 +1655,12 @@ inline void wxMenuItemBase::SetText(const wxString& text) { SetItemLabel(text); } ^~~~~~~~~~~~~~ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TAlignmentDialog.o TAlignmentDialog.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o AutoAnnotate.o AutoAnnotate.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraph.o TGraph.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraphDisplay.o TGraphDisplay.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraphScale.o TGraphScale.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o CGview.o CGview.cpp +gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ureadseq.o ureadseq.c Alignment.cpp: In member function 'virtual void TAlignment::initme()': Alignment.cpp:268:45: warning: 'wxToolBarToolBase* wxToolBarBase::AddTool(int, const wxBitmap&, const wxString&, const wxString&)' is deprecated [-Wdeprecated-declarations] txt("t_alignment_settings") ) ; @@ -1716,12 +1734,6 @@ /usr/include/wx-3.0/wx/thread.h:760:22: note: declared here inline wxThreadError wxThreadHelper::Create(unsigned int stackSize) ^~~~~~~~~~~~~~ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o AutoAnnotate.o AutoAnnotate.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraph.o TGraph.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraphDisplay.o TGraphDisplay.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TGraphScale.o TGraphScale.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o CGview.o CGview.cpp -gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ureadseq.o ureadseq.c ureadseq.c: In function 'writeSeq': ureadseq.c:1795:45: warning: '%d' directive writing between 1 and 6 bytes into a region of size between 2 and 7 [-Wformat-overflow=] if (*nameform==0) sprintf(nameform, "%%%d.%ds ",namewidth,namewidth); @@ -1736,6 +1748,7 @@ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ncoils.o ncoils.cpp In file included from /usr/include/string.h:494, from ureadseq.c:22: In function 'strcpy', @@ -1743,7 +1756,6 @@ /usr/include/i386-linux-gnu/bits/string_fortified.h:90:10: warning: '__builtin___memcpy_chk' writing 14 bytes into a region of size 10 overflows the destination [-Wstringop-overflow=] return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o ncoils.o ncoils.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TPhylip.o TPhylip.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TPhyloTree.o TPhyloTree.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o PCR_Troubleshoot.o PCR_Troubleshoot.cpp @@ -1760,11 +1772,14 @@ g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o CloningAssistant.o CloningAssistant.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TSequencingAssistantDialog.o TSequencingAssistantDialog.cpp g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o AlignmentAppearanceDialog.o AlignmentAppearanceDialog.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAAstructure.o SequenceTypeAAstructure.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o OnlineTools.o OnlineTools.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TEliteLaChromLogDialog.o TEliteLaChromLogDialog.cpp +g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TRestrictionIdentifier.o TRestrictionIdentifier.cpp PCR_Troubleshoot.cpp: In member function 'virtual wxArrayString PCR_troubleshoot_dialog::get_matches(wxArrayString&, int, int)': PCR_Troubleshoot.cpp:485:2: warning: no return statement in function returning non-void [-Wreturn-type] } ^ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o SequenceTypeAAstructure.o SequenceTypeAAstructure.cpp CloningAssistant.cpp: In member function 'void TDDR::resizeForText(wxDC&)': CloningAssistant.cpp:513:37: warning: 'void wxDC::GetTextExtent(const wxString&, long int*, long int*, long int*, long int*, const wxFont*) const' is deprecated [-Wdeprecated-declarations] dc.GetTextExtent ( title , &w , &h ) ; @@ -1779,9 +1794,6 @@ /usr/include/wx-3.0/wx/defs.h:654:43: note: in definition of macro 'wxDEPRECATED' #define wxDEPRECATED(x) wxDEPRECATED_DECL x ^ -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o OnlineTools.o OnlineTools.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TEliteLaChromLogDialog.o TEliteLaChromLogDialog.cpp -g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"GENtle\" -DVERSION=\"1.5\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -c -o TRestrictionIdentifier.o TRestrictionIdentifier.cpp g++ -g -O2 -ffile-prefix-map=/build/gentle-1.9+cvs20100605+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -D__DEBIAN__ -O2 -g -Wno-write-strings -DUSE_EXTERNAL_CLUSTALW -I/usr/lib/i386-linux-gnu/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -s -Wl,-z,relro -Wl,-z,now -o GENtle TXMLfile.o TVectorTree.o TVirtualGel.o TVectorEditorItems.o TVectorEditorEnzymes.o TVectorEditor.o TVector.o SCFtype.o TStoreAllDialog.o TDotPlot.o TUndo.o TUReadSeq.o TStorage.o TSilmutDialog.o TRestrictionEditor.o TPrimer.o TPrimerDialog.o TPDB.o TLigationDialog.o TMainTree.o todo.o TItemEditDialog.o TImageDisplay.o TIMGreader.o TextImportDialog.o TClone.o SequenceTypes.o TCalculator.o SequenceTypeRestriction.o SequenceTypePlot.o SequenceTypeFeature.o SequenceTypeDNA.o SequenceTypeAlign.o SequenceTypeABI.o SequenceTypeAA.o SequenceCanvas.o SendHTTP.o RestrictionEnzymes.o ProgramOptionsDialog.o PlasmidCanvasLinear.o PrimerDesign.o PlasmidCanvasHandlers.o PlasmidCanvasCircular.o PlasmidCanvas.o MyFrame.o MyChild.o MiscDialogs.o ManageDatabase.o main.o GenBank.o FindSequenceDialog.o ExternalNCBI.o ExternalInterface.o ExternalBLAST.o ChildBase.o CoolCanvas.o AminoAcids.o Alignment.o ABIviewer.o ABItype.o TAlignmentDialog.o AutoAnnotate.o TGraph.o TGraphDisplay.o TGraphScale.o CGview.o ureadseq.o ncoils.o TPhylip.o TPhyloTree.o PCR_Troubleshoot.o TProteolysis.o element.o gp_out.o ipc.o pars.o CloneManager.o CloningAssistant.o TSequencingAssistantDialog.o AlignmentAppearanceDialog.o SequenceTypeAAstructure.o OnlineTools.o TEliteLaChromLogDialog.o TRestrictionIdentifier.o -L/usr/lib/i386-linux-gnu -pthread -lwx_gtk2u_xrc-3.0 -lwx_gtk2u_html-3.0 -lwx_gtk2u_qa-3.0 -lwx_gtk2u_adv-3.0 -lwx_gtk2u_core-3.0 -lwx_baseu_xml-3.0 -lwx_baseu_net-3.0 -lwx_baseu-3.0 -L/usr/lib -L/usr/local/lib -lsqlite3 -lmysqlclient -ltinyxml make[1]: Leaving directory '/build/gentle-1.9+cvs20100605+dfsg1' dh_auto_test @@ -1792,7 +1804,7 @@ dh_prep dh_installdirs dh_auto_install - make -j10 install DESTDIR=/build/gentle-1.9\+cvs20100605\+dfsg1/debian/gentle AM_UPDATE_INFO_DIR=no + make -j18 install DESTDIR=/build/gentle-1.9\+cvs20100605\+dfsg1/debian/gentle AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/gentle-1.9+cvs20100605+dfsg1' make[2]: Entering directory '/build/gentle-1.9+cvs20100605+dfsg1' make[2]: Nothing to be done for 'install-data-am'. @@ -1830,10 +1842,10 @@ dh_strip dh_makeshlibs dh_shlibdeps -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libpthread.so.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libwx_baseu_xml-3.0.so.0 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libwx_gtk2u_xrc-3.0.so.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libwx_gtk2u_qa-3.0.so.0 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libwx_gtk2u_xrc-3.0.so.0 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gentle/usr/bin/GENtle was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums @@ -1845,12 +1857,14 @@ dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/11022/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/11022/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/5110 and its subdirectories -I: Current time: Sat May 9 18:11:55 -12 2020 -I: pbuilder-time-stamp: 1589091115 +I: removing directory /srv/workspace/pbuilder/11022 and its subdirectories +I: Current time: Sun Jun 13 02:36:14 +14 2021 +I: pbuilder-time-stamp: 1623501374