Diff of the two buildlogs: -- --- b1/build.log 2019-06-09 13:44:20.287832247 +0000 +++ b2/build.log 2019-06-09 14:10:19.499555152 +0000 @@ -1,7 +1,6 @@ -W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build -I: Current time: Sat Jul 11 08:05:01 -12 2020 -I: pbuilder-time-stamp: 1594497901 +I: Current time: Mon Jun 10 03:44:30 +14 2019 +I: pbuilder-time-stamp: 1560087870 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -19,7 +18,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Mon Oct 22 22:49:07 2018 -12 +gpgv: Signature made Wed Oct 24 00:49:07 2018 +14 gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./oasis3_3.mct+dfsg.121022-13.dsc @@ -31,6 +30,18 @@ dpkg-source: info: applying reproducible.patch I: using fakeroot in build. I: Installing the build-deps +I: user script /srv/workspace/pbuilder/6724/tmp/hooks/D01_modify_environment starting +disorder-fs debug: Running on profitbricks-build12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/6724/tmp/hooks/D01_modify_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -270,7 +281,7 @@ Get: 184 http://cdn-fastly.deb.debian.org/debian buster/main i386 texlive-latex-recommended all 2018.20190227-2 [15.2 MB] Get: 185 http://cdn-fastly.deb.debian.org/debian buster/main i386 texlive-pictures all 2018.20190227-2 [8201 kB] Get: 186 http://cdn-fastly.deb.debian.org/debian buster/main i386 texlive-latex-extra all 2018.20190227-2 [12.3 MB] -Fetched 146 MB in 28s (5303 kB/s) +Fetched 146 MB in 2min 3s (1191 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) @@ -1066,9 +1077,41 @@ Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). -0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 182 kB of additional disk space will be used. +Get:1 http://cdn-fastly.deb.debian.org/debian buster/main i386 libnumber-compare-perl all 0.03-1 [7642 B] +Get:2 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtext-glob-perl all 0.10-1 [8362 B] +Get:3 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://cdn-fastly.deb.debian.org/debian buster/main i386 usrmerge all 21 [12.8 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (123 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 39125 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.10-1_all.deb ... +Unpacking libtext-glob-perl (0.10-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_21_all.deb ... +Unpacking usrmerge (21) ... +Setting up libtext-glob-perl (0.10-1) ... +Setting up libnumber-compare-perl (0.03-1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (21) ... +The system has been successfully converted. +Processing triggers for man-db (2.8.5-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/oasis3-3.mct+dfsg.121022/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/oasis3-3.mct+dfsg.121022/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package oasis3 dpkg-buildpackage: info: source version 3.mct+dfsg.121022-13 dpkg-buildpackage: info: source distribution unstable @@ -1090,36 +1133,36 @@ rm -f *.dvi *.log *.bbl *.blg *.aux *.toc make[2]: Leaving directory '/build/oasis3-3.mct+dfsg.121022/lib/mct/doc' find . -name '.svn' -exec rm -rf {} \; || echo "Deleting .svn directories" -find: './lib/.svn': No such file or directory find: './lib/scrip/.svn': No such file or directory find: './lib/scrip/src/.svn': No such file or directory +find: './lib/.svn': No such file or directory +find: './lib/psmile/.svn': No such file or directory +find: './lib/psmile/src/.svn': No such file or directory +find: './lib/psmile/include/.svn': No such file or directory find: './lib/mct/protex/.svn': No such file or directory -find: './lib/mct/.svn': No such file or directory -find: './lib/mct/m4/.svn': No such file or directory -find: './lib/mct/doc/.svn': No such file or directory -find: './lib/mct/doc/texsrc/.svn': No such file or directory -find: './lib/mct/mct/.svn': No such file or directory -find: './lib/mct/mpeu/.svn': No such file or directory +find: './lib/mct/examples/simple/.svn': No such file or directory find: './lib/mct/examples/climate_concur1/.svn': No such file or directory find: './lib/mct/examples/.svn': No such file or directory -find: './lib/mct/examples/simple/.svn': No such file or directory find: './lib/mct/examples/climate_sequen1/.svn': No such file or directory +find: './lib/mct/mpeu/.svn': No such file or directory +find: './lib/mct/.svn': No such file or directory find: './lib/mct/mpi-serial/.svn': No such file or directory -find: './lib/psmile/.svn': No such file or directory -find: './lib/psmile/include/.svn': No such file or directory -find: './lib/psmile/src/.svn': No such file or directory -find: './util/.svn': No such file or directory -find: './util/make_dir/.svn': No such file or directory -find: './doc/.svn': No such file or directory -find: './doc/figures/.svn': No such file or directory +find: './lib/mct/doc/texsrc/.svn': No such file or directory +find: './lib/mct/doc/.svn': No such file or directory +find: './lib/mct/mct/.svn': No such file or directory +find: './lib/mct/m4/.svn': No such file or directory +find: './examples/tutorial/.svn': No such file or directory +find: './examples/tutorial/data_oasis3/.svn': No such file or directory +find: './examples/.svn': No such file or directory find: './examples/test_rmp_esmf/.svn': No such file or directory find: './examples/test_rmp_esmf/data_esmf/.svn': No such file or directory -find: './examples/.svn': No such file or directory find: './examples/test_interpolation/.svn': No such file or directory -find: './examples/test_interpolation/data_oasis3/.svn': No such file or directory find: './examples/test_interpolation/data_oasis3/namcouple_map_conserv_torc_lmdz/.svn': No such file or directory -find: './examples/tutorial/.svn': No such file or directory -find: './examples/tutorial/data_oasis3/.svn': No such file or directory +find: './examples/test_interpolation/data_oasis3/.svn': No such file or directory +find: './doc/.svn': No such file or directory +find: './doc/figures/.svn': No such file or directory +find: './util/.svn': No such file or directory +find: './util/make_dir/.svn': No such file or directory Deleting .svn directories rm -rf lib/mct/doc/*.pdf build /usr/bin/make -C /build/oasis3-3.mct+dfsg.121022/util/make_dir -f TopMakefileOasis3 ARCH=debian TOP=/build/oasis3-3.mct+dfsg.121022/ realclean ARCH=debian || echo "realclean done already" @@ -1168,8 +1211,8 @@ checking whether gcc -I/usr/include accepts -g... yes checking for gcc -I/usr/include option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -I/usr/include -E -checking for grep that handles long lines and -e... /bin/grep -checking for egrep... /bin/grep -E +checking for grep that handles long lines and -e... /usr/bin/grep +checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes @@ -1195,8 +1238,8 @@ checking for Fortran libraries of /usr/bin/mpif90 -Wall -I/usr/include... -L/usr/lib/i386-linux-gnu/openmpi/lib -L/usr/lib/gcc/i686-linux-gnu/8 -L/usr/lib/gcc/i686-linux-gnu/8/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/8/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/8/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore -Hostname=profitbricks-build6-i386 -Machine=x86_64 +Hostname=i-capture-the-hostname +Machine=i686 OS=Linux Output Variables: {CC=gcc -I/usr/include} {CFLAGS=-g -O2 -ffile-prefix-map=/build/oasis3-3.mct+dfsg.121022=. -fstack-protector-strong -Wformat -Werror=format-security} {FC=/usr/bin/mpif90 -Wall -I/usr/include} {FCFLAGS=-g -O2 -ffile-prefix-map=/build/oasis3-3.mct+dfsg.121022=. -fstack-protector-strong} {PROGFCFLAGS=}{CPPDEFS= -DSYSLINUX -DCPR} {OPT=} {DEBUG=} {REAL8=} {BIT64=} {ENDIAN=} {MPIFC=/usr/bin/mpif90 -Wall -I/usr/include} {MPILIBS=} {MPIHEADER=} {INCLUDEFLAG=-I} {INCLUDEPATH=} {AR=ar cq} {BABELROOT=} {COMPILER_ROOT=} {PYTHON=} {PYTHONOPTS=} {FORT_SIZE=} {prefix=NONE} {SRCDIR=} {FC_DEFINE=-D} @@ -30480,28 +30523,28 @@ debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/oasis3-3.mct+dfsg.121022' dh_shlibdeps -l/build/oasis3-3.mct+dfsg.121022//build/lib/shared -dpkg-shlibdeps: warning: symbol _gfortran_st_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_flush_i4 used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_transfer_character_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_reshape_4 used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_date_and_time used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_maxval_r8 used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_transfer_array_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol __m_die_MOD_mpdie2_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_transfer_integer used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_inq_dimid used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_size0 used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_transfer_array_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_transfer_character used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol __m_attrvect_MOD_getrlist_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_put_var_1d_fourbyteint used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol mpi_error_string_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_flush_i4 used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries +dpkg-shlibdeps: warning: 99 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol _gfortran_st_open used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_runtime_error used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_transfer_logical_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol cos used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_stop_string used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_st_close used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_transfer_integer_write used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_compare_string used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_st_write_done used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol sincos used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol lroundf used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries +dpkg-shlibdeps: warning: symbol _gfortran_date_and_time used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d found in none of the libraries dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_close used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol _gfortran_string_index used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_put_var_1d_eightbytereal used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_inq_varid used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol __m_attrvectcomms_MOD_gsm_scatter_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol mpi_recv_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol __m_transfer_MOD_recv_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol mpi_gatherv_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol __netcdf_MOD_nf90_inquire_dimension used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: symbol mpi_intercomm_create_ used by debian/liboasis3-0d/usr/lib/i386-linux-gnu/libpsmile.MPI1.so.0d found in none of the libraries -dpkg-shlibdeps: warning: 99 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/liboasis3-0d/usr/lib/i386-linux-gnu/libscrip.so.0d was not linked against libnetcdf.so.13 (it uses none of the library's symbols) make[1]: Leaving directory '/build/oasis3-3.mct+dfsg.121022' dh_installdeb @@ -30509,8 +30552,8 @@ dpkg-gencontrol: warning: Depends field of package liboasis3-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb -dpkg-deb: building package 'liboasis3-0d' in '../liboasis3-0d_3.mct+dfsg.121022-13_i386.deb'. dpkg-deb: building package 'liboasis3-dev' in '../liboasis3-dev_3.mct+dfsg.121022-13_i386.deb'. +dpkg-deb: building package 'liboasis3-0d' in '../liboasis3-0d_3.mct+dfsg.121022-13_i386.deb'. dpkg-deb: building package 'liboasis3-doc' in '../liboasis3-doc_3.mct+dfsg.121022-13_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../oasis3_3.mct+dfsg.121022-13_i386.changes @@ -30518,12 +30561,14 @@ dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/6724/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/6724/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/64093 and its subdirectories -I: Current time: Sat Jul 11 08:07:19 -12 2020 -I: pbuilder-time-stamp: 1594498039 +I: removing directory /srv/workspace/pbuilder/6724 and its subdirectories +I: Current time: Mon Jun 10 04:10:19 +14 2019 +I: pbuilder-time-stamp: 1560089419