Diff of the two buildlogs: -- --- b1/build.log 2020-02-25 01:00:46.777287767 +0000 +++ b2/build.log 2020-02-25 01:01:44.056198720 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Feb 24 12:54:40 -12 2020 -I: pbuilder-time-stamp: 1582592080 +I: Current time: Mon Mar 29 21:23:48 +14 2021 +I: pbuilder-time-stamp: 1617002628 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration @@ -18,7 +18,7 @@ I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error -gpgv: Signature made Thu May 17 01:08:50 2018 -12 +gpgv: Signature made Fri May 18 03:08:50 2018 +14 gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ray_2.3.1-6.dsc @@ -32,6 +32,18 @@ dpkg-source: info: applying stable-link-order.patch I: using fakeroot in build. I: Installing the build-deps +I: user script /srv/workspace/pbuilder/23302/tmp/hooks/D01_modify_environment starting +disorder-fs debug: Running on profitbricks-build16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/23302/tmp/hooks/D01_modify_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -145,7 +157,7 @@ Get: 70 http://deb.debian.org/debian buster/main i386 libopenmpi-dev i386 3.1.3-11 [963 kB] Get: 71 http://deb.debian.org/debian buster/main i386 mpi-default-dev i386 1.13 [5476 B] Get: 72 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] -Fetched 30.7 MB in 10s (3012 kB/s) +Fetched 30.7 MB in 1s (57.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) @@ -460,7 +472,7 @@ fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/ray-2.3.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/ray-2.3.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package ray dpkg-buildpackage: info: source version 2.3.1-6 dpkg-buildpackage: info: source distribution unstable @@ -472,11 +484,11 @@ debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ray-2.3.1' dh_auto_clean -- CXXFLAGS="-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" HAVE_LIBZ=y HAVE_LIBBZ2=y - make -j10 clean "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" HAVE_LIBZ=y HAVE_LIBBZ2=y + make -j18 clean "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" HAVE_LIBZ=y HAVE_LIBBZ2=y make[2]: Entering directory '/build/ray-2.3.1' -make -w -j10 --jobserver-auth=3,4 -C RayPlatform clean +make -w -j18 --jobserver-auth=3,4 -C RayPlatform clean make[3]: Entering directory '/build/ray-2.3.1' -make[3]: warning: -j10 forced in submake: resetting jobserver mode. +make[3]: warning: -j18 forced in submake: resetting jobserver mode. echo CLEAN RayPlatform CLEAN RayPlatform rm -f libRayPlatform.a RayPlatform/memory/ReusableMemoryStore.o RayPlatform/memory/MyAllocator.o RayPlatform/memory/RingAllocator.o RayPlatform/memory/allocator.o RayPlatform/memory/DefragmentationGroup.o RayPlatform/memory/ChunkAllocatorWithDefragmentation.o RayPlatform/memory/DefragmentationLane.o RayPlatform/memory/DirtyBuffer.o RayPlatform/routing/ConnectionGraph.o RayPlatform/routing/GraphImplementation.o RayPlatform/routing/GraphImplementationRandom.o RayPlatform/routing/GraphImplementationComplete.o RayPlatform/routing/GraphImplementationDeBruijn.o RayPlatform/routing/GraphImplementationKautz.o RayPlatform/routing/GraphImplementationExperimental.o RayPlatform/routing/GraphImplementationGroup.o RayPlatform/routing/Polytope.o RayPlatform/routing/Torus.o RayPlatform/communication/mpi_tags.o RayPlatform/communication/VirtualCommunicator.o RayPlatform/communication/BufferedData.o RayPlatform/communication/Message.o RayPlatform/communication/MessagesHandler.o RayPlatform/communication/MessageQueue.o RayPlatform/communication/MessageRouter.o RayPlatform/scheduling/VirtualProcessor.o RayPlatform/scheduling/TaskCreator.o RayPlatform/scheduling/SwitchMan.o RayPlatform/core/ComputeCore.o RayPlatform/core/MiniRank.o RayPlatform/core/slave_modes.o RayPlatform/core/OperatingSystem.o RayPlatform/core/master_modes.o RayPlatform/core/statistics.o RayPlatform/plugins/CorePlugin.o RayPlatform/plugins/RegisteredPlugin.o RayPlatform/structures/StaticVector.o RayPlatform/profiling/Profiler.o RayPlatform/profiling/Derivative.o RayPlatform/profiling/TickLogger.o RayPlatform/profiling/TimePrinter.o RayPlatform/profiling/ProcessStatus.o RayPlatform/handlers/MasterModeExecutor.o RayPlatform/handlers/SlaveModeExecutor.o RayPlatform/handlers/MessageTagExecutor.o RayPlatform/cryptography/crypto.o RayPlatform/store/KeyValueStore.o RayPlatform/store/KeyValueStoreItem.o RayPlatform/store/KeyValueStoreRequest.o RayPlatform/actors/Actor.o RayPlatform/actors/Playground.o RayPlatform/files/FileReader.o @@ -497,61 +509,61 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/ray-2.3.1' dh_auto_build -- CXXFLAGS="-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" DEBLDFLAGS="-Wl,-z,relro -Wl,-z,now -lpthread" HAVE_LIBBZ2=y HAVE_LIBZ=y - make -j10 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" "DEBLDFLAGS=-Wl,-z,relro -Wl,-z,now -lpthread" HAVE_LIBBZ2=y HAVE_LIBZ=y + make -j18 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security" "DEBLDFLAGS=-Wl,-z,relro -Wl,-z,now -lpthread" HAVE_LIBBZ2=y HAVE_LIBZ=y make[2]: Entering directory '/build/ray-2.3.1' echo " CXX code/application_core/ray_main.o" echo " CXX code/Amos/Amos.o" echo " CXX code/CoverageGatherer/CoverageGatherer.o" echo " CXX code/CoverageGatherer/CoverageDistribution.o" -echo " CXX code/EdgePurger/EdgePurger.o" CXX code/application_core/ray_main.o +echo " CXX code/EdgePurger/EdgePurger.o" CXX code/Amos/Amos.o -echo " CXX code/EdgePurger/EdgePurgerWorker.o" mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/application_core/ray_main.cpp -o code/application_core/ray_main.o - CXX code/CoverageGatherer/CoverageDistribution.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Amos/Amos.cpp -o code/Amos/Amos.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/CoverageGatherer/CoverageDistribution.cpp -o code/CoverageGatherer/CoverageDistribution.o CXX code/CoverageGatherer/CoverageGatherer.o - CXX code/EdgePurger/EdgePurger.o - CXX code/EdgePurger/EdgePurgerWorker.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/EdgePurger/EdgePurger.cpp -o code/EdgePurger/EdgePurger.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/EdgePurger/EdgePurgerWorker.cpp -o code/EdgePurger/EdgePurgerWorker.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/CoverageGatherer/CoverageGatherer.cpp -o code/CoverageGatherer/CoverageGatherer.o +echo " CXX code/EdgePurger/EdgePurgerWorker.o" + CXX code/EdgePurger/EdgePurger.o + CXX code/CoverageGatherer/CoverageDistribution.o echo " CXX code/Example/Example.o" +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/CoverageGatherer/CoverageDistribution.cpp -o code/CoverageGatherer/CoverageDistribution.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/EdgePurger/EdgePurger.cpp -o code/EdgePurger/EdgePurger.o echo " CXX code/FusionData/FusionData.o" + CXX code/EdgePurger/EdgePurgerWorker.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/EdgePurger/EdgePurgerWorker.cpp -o code/EdgePurger/EdgePurgerWorker.o echo " CXX code/FusionTaskCreator/FusionWorker.o" CXX code/Example/Example.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Example/Example.cpp -o code/Example/Example.o +echo " CXX code/FusionTaskCreator/FusionTaskCreator.o" CXX code/FusionData/FusionData.o +echo " CXX code/GeneOntology/KeyEncoder.o" mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/FusionData/FusionData.cpp -o code/FusionData/FusionData.o CXX code/FusionTaskCreator/FusionWorker.o +echo " CXX code/GeneOntology/GeneOntology.o" mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/FusionTaskCreator/FusionWorker.cpp -o code/FusionTaskCreator/FusionWorker.o -echo " CXX code/FusionTaskCreator/FusionTaskCreator.o" CXX code/FusionTaskCreator/FusionTaskCreator.o +echo " CXX code/GenomeNeighbourhood/GenomeNeighbourhood.o" mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/FusionTaskCreator/FusionTaskCreator.cpp -o code/FusionTaskCreator/FusionTaskCreator.o -echo " CXX code/GeneOntology/KeyEncoder.o" CXX code/GeneOntology/KeyEncoder.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GeneOntology/KeyEncoder.cpp -o code/GeneOntology/KeyEncoder.o -echo " CXX code/GeneOntology/GeneOntology.o" CXX code/GeneOntology/GeneOntology.o +echo " CXX code/GenomeNeighbourhood/Neighbour.o" mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GeneOntology/GeneOntology.cpp -o code/GeneOntology/GeneOntology.o -echo " CXX code/GenomeNeighbourhood/GenomeNeighbourhood.o" CXX code/GenomeNeighbourhood/GenomeNeighbourhood.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GenomeNeighbourhood/GenomeNeighbourhood.cpp -o code/GenomeNeighbourhood/GenomeNeighbourhood.o -echo " CXX code/GenomeNeighbourhood/Neighbour.o" +echo " CXX code/GenomeNeighbourhood/NeighbourPair.o" CXX code/GenomeNeighbourhood/Neighbour.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GenomeNeighbourhood/Neighbour.cpp -o code/GenomeNeighbourhood/Neighbour.o -echo " CXX code/GenomeNeighbourhood/NeighbourPair.o" - CXX code/GenomeNeighbourhood/NeighbourPair.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GenomeNeighbourhood/NeighbourPair.cpp -o code/GenomeNeighbourhood/NeighbourPair.o echo " CXX code/JoinerTaskCreator/JoinerWorker.o" - CXX code/JoinerTaskCreator/JoinerWorker.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/JoinerTaskCreator/JoinerWorker.cpp -o code/JoinerTaskCreator/JoinerWorker.o echo " CXX code/JoinerTaskCreator/JoinerTaskCreator.o" - CXX code/JoinerTaskCreator/JoinerTaskCreator.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/JoinerTaskCreator/JoinerTaskCreator.cpp -o code/JoinerTaskCreator/JoinerTaskCreator.o + CXX code/GenomeNeighbourhood/NeighbourPair.o echo " CXX code/KmerAcademyBuilder/KmerAcademyBuilder.o" + CXX code/JoinerTaskCreator/JoinerWorker.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GenomeNeighbourhood/NeighbourPair.cpp -o code/GenomeNeighbourhood/NeighbourPair.o + CXX code/JoinerTaskCreator/JoinerTaskCreator.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/JoinerTaskCreator/JoinerWorker.cpp -o code/JoinerTaskCreator/JoinerWorker.o CXX code/KmerAcademyBuilder/KmerAcademyBuilder.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/JoinerTaskCreator/JoinerTaskCreator.cpp -o code/JoinerTaskCreator/JoinerTaskCreator.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/KmerAcademyBuilder/KmerAcademyBuilder.cpp -o code/KmerAcademyBuilder/KmerAcademyBuilder.o echo " CXX code/KmerAcademyBuilder/BloomFilter.o" CXX code/KmerAcademyBuilder/BloomFilter.o @@ -587,18 +599,18 @@ CXX code/NetworkTest/NetworkTest.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/NetworkTest/NetworkTest.cpp -o code/NetworkTest/NetworkTest.o echo " CXX code/Partitioner/Partitioner.o" - CXX code/Partitioner/Partitioner.o -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Partitioner/Partitioner.cpp -o code/Partitioner/Partitioner.o echo " CXX code/PathEvaluator/PathEvaluator.o" + CXX code/Partitioner/Partitioner.o CXX code/PathEvaluator/PathEvaluator.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Partitioner/Partitioner.cpp -o code/Partitioner/Partitioner.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/PathEvaluator/PathEvaluator.cpp -o code/PathEvaluator/PathEvaluator.o echo " CXX code/Scaffolder/Scaffolder.o" CXX code/Scaffolder/Scaffolder.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Scaffolder/Scaffolder.cpp -o code/Scaffolder/Scaffolder.o echo " CXX code/Scaffolder/ScaffoldingLink.o" +echo " CXX code/Scaffolder/SummarizedLink.o" CXX code/Scaffolder/ScaffoldingLink.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Scaffolder/ScaffoldingLink.cpp -o code/Scaffolder/ScaffoldingLink.o -echo " CXX code/Scaffolder/SummarizedLink.o" CXX code/Scaffolder/SummarizedLink.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/Scaffolder/SummarizedLink.cpp -o code/Scaffolder/SummarizedLink.o echo " CXX code/Scaffolder/ScaffoldingAlgorithm.o" @@ -842,9 +854,9 @@ echo " CXX code/application_core/Machine.o" CXX code/application_core/Machine.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/application_core/Machine.cpp -o code/application_core/Machine.o -make -w -j10 --jobserver-auth=3,4 -C RayPlatform +make -w -j18 --jobserver-auth=3,4 -C RayPlatform make[3]: Entering directory '/build/ray-2.3.1' -make[3]: warning: -j10 forced in submake: resetting jobserver mode. +make[3]: warning: -j18 forced in submake: resetting jobserver mode. echo " CXX RayPlatform/memory/ReusableMemoryStore.o" CXX RayPlatform/memory/ReusableMemoryStore.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/ReusableMemoryStore.o RayPlatform/memory/ReusableMemoryStore.cpp @@ -858,22 +870,22 @@ CXX RayPlatform/memory/allocator.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/allocator.o RayPlatform/memory/allocator.cpp echo " CXX RayPlatform/memory/DefragmentationGroup.o" -echo " CXX RayPlatform/memory/ChunkAllocatorWithDefragmentation.o" CXX RayPlatform/memory/DefragmentationGroup.o - CXX RayPlatform/memory/ChunkAllocatorWithDefragmentation.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/DefragmentationGroup.o RayPlatform/memory/DefragmentationGroup.cpp -mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/ChunkAllocatorWithDefragmentation.o RayPlatform/memory/ChunkAllocatorWithDefragmentation.cpp +echo " CXX RayPlatform/memory/ChunkAllocatorWithDefragmentation.o" echo " CXX RayPlatform/memory/DefragmentationLane.o" + CXX RayPlatform/memory/ChunkAllocatorWithDefragmentation.o CXX RayPlatform/memory/DefragmentationLane.o +mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/ChunkAllocatorWithDefragmentation.o RayPlatform/memory/ChunkAllocatorWithDefragmentation.cpp mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/DefragmentationLane.o RayPlatform/memory/DefragmentationLane.cpp echo " CXX RayPlatform/memory/DirtyBuffer.o" CXX RayPlatform/memory/DirtyBuffer.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/memory/DirtyBuffer.o RayPlatform/memory/DirtyBuffer.cpp echo " CXX RayPlatform/routing/ConnectionGraph.o" -echo " CXX RayPlatform/routing/GraphImplementation.o" CXX RayPlatform/routing/ConnectionGraph.o - CXX RayPlatform/routing/GraphImplementation.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/routing/ConnectionGraph.o RayPlatform/routing/ConnectionGraph.cpp +echo " CXX RayPlatform/routing/GraphImplementation.o" + CXX RayPlatform/routing/GraphImplementation.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/routing/GraphImplementation.o RayPlatform/routing/GraphImplementation.cpp echo " CXX RayPlatform/routing/GraphImplementationRandom.o" CXX RayPlatform/routing/GraphImplementationRandom.o @@ -1001,14 +1013,14 @@ echo " CXX RayPlatform/files/FileReader.o" CXX RayPlatform/files/FileReader.o mpicxx -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ray-2.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -D RAYPLATFORM_VERSION=\"2.0.1\" -I. -c -o RayPlatform/files/FileReader.o RayPlatform/files/FileReader.cpp -echo " AR libRay.a" - AR libRay.a -ar rcs libRay.a code/Amos/Amos.o code/CoverageGatherer/CoverageGatherer.o code/CoverageGatherer/CoverageDistribution.o code/EdgePurger/EdgePurger.o code/EdgePurger/EdgePurgerWorker.o code/Example/Example.o code/FusionData/FusionData.o code/FusionTaskCreator/FusionWorker.o code/FusionTaskCreator/FusionTaskCreator.o code/GeneOntology/KeyEncoder.o code/GeneOntology/GeneOntology.o code/GenomeNeighbourhood/GenomeNeighbourhood.o code/GenomeNeighbourhood/Neighbour.o code/GenomeNeighbourhood/NeighbourPair.o code/JoinerTaskCreator/JoinerWorker.o code/JoinerTaskCreator/JoinerTaskCreator.o code/KmerAcademyBuilder/KmerAcademyBuilder.o code/KmerAcademyBuilder/BloomFilter.o code/KmerAcademyBuilder/Kmer.o code/Library/LibraryPeakFinder.o code/Library/LibraryWorker.o code/Library/Library.o code/MachineHelper/MachineHelper.o code/MessageProcessor/MessageProcessor.o code/Mock/Parameters.o code/Mock/common_functions.o code/Mock/Mock.o code/NetworkTest/NetworkTest.o code/Partitioner/Partitioner.o code/PathEvaluator/PathEvaluator.o code/Scaffolder/Scaffolder.o code/Scaffolder/ScaffoldingLink.o code/Scaffolder/SummarizedLink.o code/Scaffolder/ScaffoldingAlgorithm.o code/Scaffolder/ScaffoldingVertex.o code/Scaffolder/ScaffoldingEdge.o code/Searcher/Searcher.o code/Searcher/SearchDirectory.o code/Searcher/ContigSearchEntry.o code/Searcher/ContigHit.o code/Searcher/ColorSet.o code/Searcher/VirtualKmerColor.o code/Searcher/QualityCaller.o code/Searcher/DistributionWriter.o code/Searcher/ColoredPeakFinder.o code/SeedExtender/SeedExtender.o code/SeedExtender/Direction.o code/SeedExtender/VertexMessenger.o code/SeedExtender/ReadFetcher.o code/SeedExtender/BubbleTool.o code/SeedExtender/Chooser.o code/SeedExtender/OpenAssemblerChooser.o code/SeedExtender/TipWatchdog.o code/SeedExtender/NovaEngine.o code/SeedExtender/ExtensionElement.o code/SeedExtender/DepthFirstSearchData.o code/SeedExtender/ExtensionData.o code/SeedingData/GraphPath.o code/SeedingData/SeedWorker.o code/SeedingData/SeedingData.o code/SeedingData/PathHandle.o code/SequencesIndexer/SequencesIndexer.o code/SequencesIndexer/IndexerWorker.o code/SequencesIndexer/PairedRead.o code/SequencesIndexer/ReadAnnotation.o code/SequencesLoader/SequencesLoader.o code/SequencesLoader/Read.o code/SequencesLoader/ArrayOfReads.o code/SequencesLoader/ColorSpaceDecoder.o code/SequencesLoader/ColorSpaceLoader.o code/SequencesLoader/FastaLoader.o code/SequencesLoader/FastaLoaderForReads.o code/SequencesLoader/FastqLoader.o code/SequencesLoader/ExportLoader.o code/SequencesLoader/LoaderInterface.o code/SequencesLoader/LoaderFactory.o code/SequencesLoader/SffLoader.o code/SequencesLoader/Loader.o code/SequencesLoader/BufferedReader.o code/SequencesLoader/ReadHandle.o code/SequencesLoader/BzReader.o code/SequencesLoader/FastqBz2Loader.o code/SequencesLoader/FastaBz2Loader.o code/SequencesLoader/FastqGzLoader.o code/SequencesLoader/FastaGzLoader.o code/SequencesLoader/SequenceFileDetector.o code/SpuriousSeedAnnihilator/SpuriousSeedAnnihilator.o code/SpuriousSeedAnnihilator/AnnihilationWorker.o code/SpuriousSeedAnnihilator/SeedFilteringWorkflow.o code/SpuriousSeedAnnihilator/AttributeFetcher.o code/SpuriousSeedAnnihilator/AnnotationFetcher.o code/SpuriousSeedAnnihilator/NanoMerger.o code/SpuriousSeedAnnihilator/SeedMergingWorkflow.o code/SpuriousSeedAnnihilator/GraphExplorer.o code/SpuriousSeedAnnihilator/GraphSearchResult.o code/SpuriousSeedAnnihilator/SeedGossipSolver.o code/SpuriousSeedAnnihilator/GossipAssetManager.o code/Surveyor/Mother.o code/Surveyor/StoreKeeper.o code/Surveyor/GenomeGraphReader.o code/Surveyor/CoalescenceManager.o code/Surveyor/ExperimentVertex.o code/Surveyor/MatrixOwner.o code/TaxonomyViewer/TaxonomyViewer.o code/TaxonomyViewer/GenomeToTaxonLoader.o code/TaxonomyViewer/TaxonomicTreeLoader.o code/TaxonomyViewer/TaxonNameLoader.o code/VerticesExtractor/VerticesExtractor.o code/VerticesExtractor/GridTable.o code/VerticesExtractor/GridTableIterator.o code/VerticesExtractor/Vertex.o code/application_core/Machine.o echo " AR libRayPlatform.a" AR libRayPlatform.a ar rcs libRayPlatform.a RayPlatform/memory/ReusableMemoryStore.o RayPlatform/memory/MyAllocator.o RayPlatform/memory/RingAllocator.o RayPlatform/memory/allocator.o RayPlatform/memory/DefragmentationGroup.o RayPlatform/memory/ChunkAllocatorWithDefragmentation.o RayPlatform/memory/DefragmentationLane.o RayPlatform/memory/DirtyBuffer.o RayPlatform/routing/ConnectionGraph.o RayPlatform/routing/GraphImplementation.o RayPlatform/routing/GraphImplementationRandom.o RayPlatform/routing/GraphImplementationComplete.o RayPlatform/routing/GraphImplementationDeBruijn.o RayPlatform/routing/GraphImplementationKautz.o RayPlatform/routing/GraphImplementationExperimental.o RayPlatform/routing/GraphImplementationGroup.o RayPlatform/routing/Polytope.o RayPlatform/routing/Torus.o RayPlatform/communication/mpi_tags.o RayPlatform/communication/VirtualCommunicator.o RayPlatform/communication/BufferedData.o RayPlatform/communication/Message.o RayPlatform/communication/MessagesHandler.o RayPlatform/communication/MessageQueue.o RayPlatform/communication/MessageRouter.o RayPlatform/scheduling/VirtualProcessor.o RayPlatform/scheduling/TaskCreator.o RayPlatform/scheduling/SwitchMan.o RayPlatform/core/ComputeCore.o RayPlatform/core/MiniRank.o RayPlatform/core/slave_modes.o RayPlatform/core/OperatingSystem.o RayPlatform/core/master_modes.o RayPlatform/core/statistics.o RayPlatform/plugins/CorePlugin.o RayPlatform/plugins/RegisteredPlugin.o RayPlatform/structures/StaticVector.o RayPlatform/profiling/Profiler.o RayPlatform/profiling/Derivative.o RayPlatform/profiling/TickLogger.o RayPlatform/profiling/TimePrinter.o RayPlatform/profiling/ProcessStatus.o RayPlatform/handlers/MasterModeExecutor.o RayPlatform/handlers/SlaveModeExecutor.o RayPlatform/handlers/MessageTagExecutor.o RayPlatform/cryptography/crypto.o RayPlatform/store/KeyValueStore.o RayPlatform/store/KeyValueStoreItem.o RayPlatform/store/KeyValueStoreRequest.o RayPlatform/actors/Actor.o RayPlatform/actors/Playground.o RayPlatform/files/FileReader.o make[3]: Leaving directory '/build/ray-2.3.1/RayPlatform' cp RayPlatform/libRayPlatform.a libRayPlatform.a +echo " AR libRay.a" + AR libRay.a +ar rcs libRay.a code/Amos/Amos.o code/CoverageGatherer/CoverageGatherer.o code/CoverageGatherer/CoverageDistribution.o code/EdgePurger/EdgePurger.o code/EdgePurger/EdgePurgerWorker.o code/Example/Example.o code/FusionData/FusionData.o code/FusionTaskCreator/FusionWorker.o code/FusionTaskCreator/FusionTaskCreator.o code/GeneOntology/KeyEncoder.o code/GeneOntology/GeneOntology.o code/GenomeNeighbourhood/GenomeNeighbourhood.o code/GenomeNeighbourhood/Neighbour.o code/GenomeNeighbourhood/NeighbourPair.o code/JoinerTaskCreator/JoinerWorker.o code/JoinerTaskCreator/JoinerTaskCreator.o code/KmerAcademyBuilder/KmerAcademyBuilder.o code/KmerAcademyBuilder/BloomFilter.o code/KmerAcademyBuilder/Kmer.o code/Library/LibraryPeakFinder.o code/Library/LibraryWorker.o code/Library/Library.o code/MachineHelper/MachineHelper.o code/MessageProcessor/MessageProcessor.o code/Mock/Parameters.o code/Mock/common_functions.o code/Mock/Mock.o code/NetworkTest/NetworkTest.o code/Partitioner/Partitioner.o code/PathEvaluator/PathEvaluator.o code/Scaffolder/Scaffolder.o code/Scaffolder/ScaffoldingLink.o code/Scaffolder/SummarizedLink.o code/Scaffolder/ScaffoldingAlgorithm.o code/Scaffolder/ScaffoldingVertex.o code/Scaffolder/ScaffoldingEdge.o code/Searcher/Searcher.o code/Searcher/SearchDirectory.o code/Searcher/ContigSearchEntry.o code/Searcher/ContigHit.o code/Searcher/ColorSet.o code/Searcher/VirtualKmerColor.o code/Searcher/QualityCaller.o code/Searcher/DistributionWriter.o code/Searcher/ColoredPeakFinder.o code/SeedExtender/SeedExtender.o code/SeedExtender/Direction.o code/SeedExtender/VertexMessenger.o code/SeedExtender/ReadFetcher.o code/SeedExtender/BubbleTool.o code/SeedExtender/Chooser.o code/SeedExtender/OpenAssemblerChooser.o code/SeedExtender/TipWatchdog.o code/SeedExtender/NovaEngine.o code/SeedExtender/ExtensionElement.o code/SeedExtender/DepthFirstSearchData.o code/SeedExtender/ExtensionData.o code/SeedingData/GraphPath.o code/SeedingData/SeedWorker.o code/SeedingData/SeedingData.o code/SeedingData/PathHandle.o code/SequencesIndexer/SequencesIndexer.o code/SequencesIndexer/IndexerWorker.o code/SequencesIndexer/PairedRead.o code/SequencesIndexer/ReadAnnotation.o code/SequencesLoader/SequencesLoader.o code/SequencesLoader/Read.o code/SequencesLoader/ArrayOfReads.o code/SequencesLoader/ColorSpaceDecoder.o code/SequencesLoader/ColorSpaceLoader.o code/SequencesLoader/FastaLoader.o code/SequencesLoader/FastaLoaderForReads.o code/SequencesLoader/FastqLoader.o code/SequencesLoader/ExportLoader.o code/SequencesLoader/LoaderInterface.o code/SequencesLoader/LoaderFactory.o code/SequencesLoader/SffLoader.o code/SequencesLoader/Loader.o code/SequencesLoader/BufferedReader.o code/SequencesLoader/ReadHandle.o code/SequencesLoader/BzReader.o code/SequencesLoader/FastqBz2Loader.o code/SequencesLoader/FastaBz2Loader.o code/SequencesLoader/FastqGzLoader.o code/SequencesLoader/FastaGzLoader.o code/SequencesLoader/SequenceFileDetector.o code/SpuriousSeedAnnihilator/SpuriousSeedAnnihilator.o code/SpuriousSeedAnnihilator/AnnihilationWorker.o code/SpuriousSeedAnnihilator/SeedFilteringWorkflow.o code/SpuriousSeedAnnihilator/AttributeFetcher.o code/SpuriousSeedAnnihilator/AnnotationFetcher.o code/SpuriousSeedAnnihilator/NanoMerger.o code/SpuriousSeedAnnihilator/SeedMergingWorkflow.o code/SpuriousSeedAnnihilator/GraphExplorer.o code/SpuriousSeedAnnihilator/GraphSearchResult.o code/SpuriousSeedAnnihilator/SeedGossipSolver.o code/SpuriousSeedAnnihilator/GossipAssetManager.o code/Surveyor/Mother.o code/Surveyor/StoreKeeper.o code/Surveyor/GenomeGraphReader.o code/Surveyor/CoalescenceManager.o code/Surveyor/ExperimentVertex.o code/Surveyor/MatrixOwner.o code/TaxonomyViewer/TaxonomyViewer.o code/TaxonomyViewer/GenomeToTaxonLoader.o code/TaxonomyViewer/TaxonomicTreeLoader.o code/TaxonomyViewer/TaxonNameLoader.o code/VerticesExtractor/VerticesExtractor.o code/VerticesExtractor/GridTable.o code/VerticesExtractor/GridTableIterator.o code/VerticesExtractor/Vertex.o code/application_core/Machine.o echo " LD Ray" LD Ray mpicxx code/application_core/ray_main.o libRay.a libRayPlatform.a -oRay -lz -lbz2 -Wl,-z,relro -Wl,-z,now -lpthread @@ -1026,7 +1038,7 @@ dh_testroot dh_prep dh_auto_install - make -j10 install DESTDIR=/build/ray-2.3.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + make -j18 install DESTDIR=/build/ray-2.3.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/ray-2.3.1' mkdir -p install-prefix echo "" @@ -1066,22 +1078,24 @@ dh_gencontrol dh_md5sums dh_builddeb +dpkg-deb: building package 'ray-dbgsym' in '../ray-dbgsym_2.3.1-6_i386.deb'. dpkg-deb: building package 'ray' in '../ray_2.3.1-6_i386.deb'. -dpkg-deb: building package 'ray-extra' in '../ray-extra_2.3.1-6_all.deb'. dpkg-deb: building package 'ray-doc' in '../ray-doc_2.3.1-6_all.deb'. -dpkg-deb: building package 'ray-dbgsym' in '../ray-dbgsym_2.3.1-6_i386.deb'. +dpkg-deb: building package 'ray-extra' in '../ray-extra_2.3.1-6_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ray_2.3.1-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/23302/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/23302/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/11299 and its subdirectories -I: Current time: Mon Feb 24 13:00:46 -12 2020 -I: pbuilder-time-stamp: 1582592446 +I: removing directory /srv/workspace/pbuilder/23302 and its subdirectories +I: Current time: Mon Mar 29 21:24:43 +14 2021 +I: pbuilder-time-stamp: 1617002683